Citrus Sinensis ID: 045343

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810---
Protein Sequence
MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSMG
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccccEEEEEEccccccccccEEEEEEEEcccccccEEEEEEccccccccccccEEEEEccccEEEEcccccEEEcccccccccEEEEEEccccEEEEcccccccEEcccccccccccccccccccEEEEcccccccccEEEEEEEEccccEEEEEccccccccccccccccccccccccccccEEEEEcccEEEEEEccccEEEEEEEccccccccEEEEEEccccEEEEEEEcccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccHHHHHHHHHccccEEEEEEcccEEEEEccccccccccccccccEEEEEEcccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEHHHHHHHHcccccccccccccEEEEEEEccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEcccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccccccccEEEEEEEEcccccccHHHccccccEEcEEEEEEEEEEEEEEcccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccccEEEccccEEEEEEEcccccccccccEEEEEEEEcccccEEEEEEEcccccccccccEEEEEccccEEEEEEccccEEEEEccccccccEEEEEccccEEEEEccccEEEEEccccccccccccccccccEEEEcccccccccccEEEEEccccccEEEEEEcccccccccEEEcccccccEEcccccccccccccEEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEccccccEEEEEEccccccccHcccccccccccccEEccccccccccccccccccccccccccccEEccccccccccccccccEEEEcccccccccccccHHHccccHHHHHHHHHHcccEEEEEEccccccccEEEEccccccEEEEccccEHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEcHHHHHHHHHcHHHHcccccccccEHcEEHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccHcHHHEccccccHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHEEEcccccEEEccccccHHcccccccccccEEEEEcccccHHHHHcccEEEcccHEEHEEEEEEEEccccccccccccccccHHHHHHHHHHccccHHHHcHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHEEEccccccccccccccccccccc
Coil and Loop (DISEMBL)
MASARLYFIFLLFQLpfylhlsiaqnngtvpvgatltagtnsstwlspsgdfafgfrqvdeenntndLFLLSIFysnipaktvvwytdnkdqnpavprgsqvkltadhglvlndpqgkqvwsseidIGTVAVGHMNDTGNFVLASssssklwdsfsnpsdtllpgqtmetkqglfsrksetnfsrgrFQFRllkdgnlvlnianlptgdaydayyisgtydpanssnsgyrvmfNESGYMYILRrnggrfdlttesvvpaadfYYRATLnfdgvfaqyfypkngnenwsvawsepenicvniggemgsgacgfnsicsldsdrrpkcacpkgyslldendrygsckpdfelscwgggqgykkelFDFHelqltnwhlsdserfrpynevqcknsclsdcfcAAVIfqddccwfkklplsngmtdgrlTSKAFMKYknkgddppsvprppdpedkkkrkmMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKkwirnspgdgtietnlpcfsykELEEATDNfkeevgrgsfgIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNngtlasflfgnlkpswnlrTNIAFQIARGLLYLhedcsaqiihcdikpqnillddyynariSDFGLAKLLTLNQSKAIRTAIrgtkgyvapewfrnstitakvDVYSFGVLLLEIISCRKsfdiemgeEYAILTDWAFDcyrneklddlvegDMEALNDIKCVEKLVMVSIWCiqedpslrpTMKKVLQMLEGVvevslppnpypfsssmg
Flexible Loop (DISEMBL)
MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETkqglfsrksetnfsrGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYdpanssnsgYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLplsngmtdgRLTSKAFMKyknkgddppsvprppdpedKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNfkeevgrgsFGIVYKGVIlttrtsttavaVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRtairgtkgyvapewfrnstitakvdVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVvevslppnpypfsssmg
Low Complexity Region (SEG)
MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLAsssssklwdsfsNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGddppsvprppdpedkkkrkMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSMG
Disordered region (IsUnstruct)
****RLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYT**********************LVLN**QGKQVWSSEIDIGTVAVGHMNDTGNFVL*****************************************RGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNG******************************************GSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE***************
Disordered Region (DISOPRED)
***ARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDE*****SCK***E***********KELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGD*********************ATGSVLLGSSVFVNFALVCAFGLSFFFIY*******************CFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF****GEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPF**S**
Disordered Region (DISEMBL)
MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKN*********************MMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSMG
Disordered Region (DISPRO)
*ASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIR******TIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSMG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	813	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	yes	no	0.960	0.938	0.480	0.0
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.929	0.866	0.319	1e-102
Q9XID3	829	G-type lectin S-receptor-	no	no	0.884	0.867	0.325	1e-100
P17801	817	Putative receptor protein	N/A	no	0.915	0.910	0.320	2e-88
O64477	828	G-type lectin S-receptor-	no	no	0.901	0.885	0.318	1e-86
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.393	0.389	0.466	4e-79
Q39203	797	G-type lectin S-receptor-	no	no	0.820	0.836	0.304	8e-79
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.931	0.888	0.283	1e-75
O81906	849	G-type lectin S-receptor-	no	no	0.908	0.870	0.277	2e-73
O65238	872	G-type lectin S-receptor-	no	no	0.827	0.771	0.292	7e-73

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/839 (48%), Positives = 529/839 (63%), Gaps = 58/839 (6%)

Query: 3   SARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTN---SSTWLSPSGDFAFGFRQV 59
           S  +  + L+ QL  +   S    NG+VPVG +LTA  +   SS+W SPSGDFAFGFR++
Sbjct: 5   SCSIIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKI 64

Query: 60  DEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPA-VPRGSQVKLTADHGLVLNDPQGK 118
                 ND F LSI++  I  KT+VW+    +     VP GS+V LTAD GLV+ DP+G+
Sbjct: 65  ----QPNDGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQ 120

Query: 119 QVWSSEIDIGTVAVGHMNDTGNFVL----ASSSSSKLWDSFSNPSDTLLPGQTMETKQGL 174
           ++W + +  G+V+ G   D GNFVL    +  S   LW SF NP+DTLLP Q +E  + L
Sbjct: 121 ELWRA-LSGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNL 179

Query: 175 FSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTG---DAYDAYYISGTYDPANSSNSGYR 231
            SR++ET+F +GRF  RL  DGNL L+  N  T    D Y  YY S T DP   +N G +
Sbjct: 180 SSRRTETSFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDP---NNPGIQ 236

Query: 232 VMFNESGYMYILRRNGGRFDLTTES--VVPAADFYYRATLNFDGVFAQYFYPKNGNE--N 287
           ++FN+SG +Y+L+RN  RF +         AA FY        G       PK       
Sbjct: 237 LVFNQSGEIYVLQRNNSRFVVKDRDPDFSIAAPFYIST-----GFLLSTIIPKEARRIVG 291

Query: 288 WSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKP 347
             +     +N+C +    +G+ ACG+N+ICSL +++RPKC CP+ + L D ++ YG C P
Sbjct: 292 GCLLGLCRDNMC-SPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLP 350

Query: 348 DFEL-SCWGGGQGYKKE--LFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAV 404
           DFE+ +C    Q    +  L++F  L+ TNW   D E +  Y+E +CK SCLSDC CAAV
Sbjct: 351 DFEMQTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAV 410

Query: 405 IF---QDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNK--GDDPPSVPRPPDPEDKKKRKM 459
           IF   +D  CW KK PLS+G    R  S  F+K +N+   D P +  R       KK   
Sbjct: 411 IFGTNRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRSIADVPVTGNR------AKKLDW 464

Query: 460 MNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGD--------GTIETNLPCF 511
           +    SVLLG+S FV F   C++  +      K  ++N   D           E NL  F
Sbjct: 465 LIIACSVLLGTSAFVIFDTSCSYRKT---KKSKNMMKNQARDIGRTTATTTANELNLRVF 521

Query: 512 SYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 571
           +Y EL EAT +F EE+GRG+FGIVYKG +     S   VAVKKLDR+  D EKEFKNEV 
Sbjct: 522 TYGELAEATRDFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVK 581

Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARG 631
           VIGQ HHKNLVRL+GFC+EGQ++++VYEFL  GTLA+FLF   +PSW  R NIA  IARG
Sbjct: 582 VIGQIHHKNLVRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARG 641

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +LYLHE+CS QIIHCDIKPQNILLD+YY  RISDFGLAKLL +NQ+  + T IRGTKGYV
Sbjct: 642 ILYLHEECSEQIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTL-TNIRGTKGYV 700

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           APEWFRNS IT+KVDVYS+GV+LLEI+ C+K+ D+   E+  IL +WA+DC+R  +L+DL
Sbjct: 701 APEWFRNSPITSKVDVYSYGVMLLEIVCCKKAVDL---EDNVILINWAYDCFRQGRLEDL 757

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSS 810
            E D EA+ND++ VE+ V ++IWCIQE+  +RP M+ V QMLEGV++V  PPNP P+S+
Sbjct: 758 TEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPSPYST 816

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 269/842 (31%), Positives = 411/842 (48%), Gaps = 86/842 (10%)

Query: 7   YFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTN 66
           +F F L  L    H+ +         G+ L A   +  W+S +G FA GF +        
Sbjct: 16  FFCFFLVSLATEPHIGL---------GSKLKASEPNRAWVSANGTFAIGFTRFKP----T 62

Query: 67  DLFLLSIFYSNIPAK-TVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEI 125
           D FLLSI+++ +P   T+VW   + ++N  V + + ++L A   LVL+D Q   VW+S  
Sbjct: 63  DRFLLSIWFAQLPGDPTIVW---SPNRNSPVTKEAVLELEATGNLVLSD-QNTVVWTSNT 118

Query: 126 DIGTVAVGHMNDTGNFVLASS---SSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETN 182
               V    M+++GNF+L  +   +   +W SFS PSDTLLP Q +     L S  S + 
Sbjct: 119 SNHGVESAVMSESGNFLLLGTEVTAGPTIWQSFSQPSDTLLPNQPLTVSLELTSNPSPSR 178

Query: 183 FSRGRFQFRLLKDGN-----LVLNI-----ANLPTGDAYDAYYISGTYDPANSSNSGYRV 232
              G +  ++L+        L  NI     AN       D   ++G           +++
Sbjct: 179 --HGHYSLKMLQQHTSLSLGLTYNINLDPHANYSYWSGPDISNVTGDVTAVLDDTGSFKI 236

Query: 233 MFNES--GYMYILRR---------NGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYP 281
           ++ ES  G +Y+ +          N     LT   V+       R  L  +G    Y + 
Sbjct: 237 VYGESSIGAVYVYKNPVDDNRNYNNSSNLGLTKNPVL------RRLVLENNGNLRLYRWD 290

Query: 282 K--NGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRR-PKCACPKGYSLLDE 338
              NG+  W   W+   N C +I     +G CG N +C+LD  ++   C C  G   L +
Sbjct: 291 NDMNGSSQWVPEWAAVSNPC-DI-----AGICG-NGVCNLDRTKKNADCLCLPGSVKLPD 343

Query: 339 NDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEV----QCKNS 394
            +    C  +  L         +   F    +Q TN++ S+       +++    +C   
Sbjct: 344 QENAKLCSDNSSLVQECESNINRNGSFKISTVQETNYYFSERSVIENISDISNVRKCGEM 403

Query: 395 CLSDCFCAAVIFQDD----CCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPD 450
           CLSDC C A ++  D     CW  K     G  D    S  F+K +     P +      
Sbjct: 404 CLSDCKCVASVYGLDDEKPYCWILKSLNFGGFRDP--GSTLFVKTRANESYPSNSNN--- 458

Query: 451 PEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFF-IYKKKWIRNSPGDGTIETNLP 509
             D K RK       VL+   V     LV   G+  ++ + +K+ ++ +  +  I  + P
Sbjct: 459 -NDSKSRKSHGLRQKVLVIPIVVGMLVLVALLGMLLYYNLDRKRTLKRAAKNSLILCDSP 517

Query: 510 C-FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
             F+Y++L+  T+NF + +G G FG VYKG +       T VAVK+LDR    GE+EF  
Sbjct: 518 VSFTYRDLQNCTNNFSQLLGSGGFGTVYKGTV----AGETLVAVKRLDRALSHGEREFIT 573

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WNLRTNI 624
           EV  IG  HH NLVRL G+C E  +RLLVYE++ NG+L  ++F + + +    W  R  I
Sbjct: 574 EVNTIGSMHHMNLVRLCGYCSEDSHRLLVYEYMINGSLDKWIFSSEQTANLLDWRTRFEI 633

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A   A+G+ Y HE C  +IIHCDIKP+NILLDD +  ++SDFGLAK++    S  + T I
Sbjct: 634 AVATAQGIAYFHEQCRNRIIHCDIKPENILLDDNFCPKVSDFGLAKMMGREHSHVV-TMI 692

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           RGT+GY+APEW  N  IT K DVYS+G+LLLEI+  R++ D+    E      WA+    
Sbjct: 693 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSYDAEDFFYPGWAYKELT 752

Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV-EVSLPP 803
           N      V+  ++ + + + V K + V+ WCIQ++ S+RP+M +V+++LEG   E++LPP
Sbjct: 753 NGTSLKAVDKRLQGVAEEEEVVKALKVAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPP 812

Query: 804 NP 805
            P
Sbjct: 813 MP 814

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  367 bits (943), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 263/809 (32%), Positives = 401/809 (49%), Gaps = 90/809 (11%)

Query: 29  TVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSI-FYSNIPAKTVVWYT 87
           T+P+G+ + A  ++  W SP+  F+  F      N+    FL ++ F  ++P    +W  
Sbjct: 26  TIPLGSVIYASGSNQNWPSPNSTFSVSFVPSPSPNS----FLAAVSFAGSVP----IWSA 77

Query: 88  DNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSS 147
              D      RGS ++L     L L +  G  VW S+ D   V  G + DTG F+L ++ 
Sbjct: 78  GTVDS-----RGS-LRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFILLNNR 131

Query: 148 SSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPT 207
           S  +W SF NP+DT++  Q     + L S         G + F+L + GNL L       
Sbjct: 132 SVPVWSSFDNPTDTIVQSQNFTAGKILRS---------GLYSFQLERSGNLTLRW----- 177

Query: 208 GDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRA 267
            +    Y+  G     +S+ S  R+    +G + I   N     L    +V + D+    
Sbjct: 178 -NTSAIYWNHGLNSSFSSNLSSPRLSLQTNGVVSIFESN----LLGGAEIVYSGDYGDSN 232

Query: 268 TLNF-----DGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSD 322
           T  F     DG    Y      +   +  WS  +   V        G CG   ICS + D
Sbjct: 233 TFRFLKLDDDGNLRIYSSASRNSGPVNAHWSAVDQCLV-------YGYCGNFGICSYN-D 284

Query: 323 RRPKCACP-KGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDF-HELQLTNWHLSDS 380
             P C+CP + +  +D NDR   CK   ELS   G       + D  H    T     +S
Sbjct: 285 TNPICSCPSRNFDFVDVNDRRKGCKRKVELSDCSG----NTTMLDLVHTRLFTYEDDPNS 340

Query: 381 ERFRPYNEVQCKNSCLSDCFCAAVIFQDDC---CWFKKLPLS--NGMTDGRLTSKAFMKY 435
           E F       C+ +CLS   C A +   D    CW +K P S   G     + S +++K 
Sbjct: 341 ESFFA-GSSPCRANCLSSVLCLASVSMSDGSGNCW-QKHPGSFFTGYQWPSVPSTSYVKV 398

Query: 436 KNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWI 495
                   ++ R    +D   +  +      ++  +V      + A  +  ++       
Sbjct: 399 CGP-VVANTLERATKGDDNNSKVHL-----WIVAVAVIAGLLGLVAVEIGLWWCC----C 448

Query: 496 RNSPGDGTIETNLPC----------FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRT 545
           R +P  GT+ ++             F+YKEL+  T +FKE++G G FG VY+GV+    T
Sbjct: 449 RKNPRFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGFGTVYRGVL----T 504

Query: 546 STTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGT 605
           + T VAVK+L+ + Q GEK+F+ EV  I  THH NLVRL+GFC +G++RLLVYEF+ NG+
Sbjct: 505 NRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGS 563

Query: 606 LASFLFGNLKP---SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
           L +FLF        +W  R NIA   A+G+ YLHE+C   I+HCDIKP+NIL+DD + A+
Sbjct: 564 LDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAK 623

Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           +SDFGLAKLL    ++   +++RGT+GY+APEW  N  IT+K DVYS+G++LLE++S ++
Sbjct: 624 VSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKR 683

Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM--EALNDIKCVEKLVMVSIWCIQEDP 780
           +FD+     +   + WA++ +       +++  +  +   D++ V ++V  S WCIQE P
Sbjct: 684 NFDVSEKTNHKKFSIWAYEEFEKGNTKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQP 743

Query: 781 SLRPTMKKVLQMLEGVVEVSLPPNPYPFS 809
             RPTM KV+QMLEG+ E+  P  P   S
Sbjct: 744 LQRPTMGKVVQMLEGITEIKNPLCPKTIS 772

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2

 Score =  327 bits (839), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 267/833 (32%), Positives = 399/833 (47%), Gaps = 89/833 (10%)

Query: 15  LPFYLHL--SIAQNNGTVPVGATLTAGT-NSSTWLSPSGDFAFGFRQVDEENNTNDLFLL 71
           L F++ L    A +   +P+G++L   +  SST  S  G F+ GF +V         F  
Sbjct: 15  LSFFIALFPRAASSRDILPLGSSLVVESYESSTLQSSDGTFSSGFYEV-----YTHAFTF 69

Query: 72  SIFYSNIPA-----KTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEID 126
           S++YS   A     KT+VW + N D+ P   R S + L  D  +VL D  G  VW ++ +
Sbjct: 70  SVWYSKTEAAAANNKTIVW-SANPDR-PVHARRSALTLQKDGNMVLTDYDGAAVWRADGN 127

Query: 127 IGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSR 185
             T V    + DTGN V+  S  + +W SF +P+DT LP Q +     L    +  + S 
Sbjct: 128 NFTGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLITAATRLV--PTTQSRSP 185

Query: 186 GRFQFRLLKDGNLVLNIANLP-TGDAYDAYYISGTY-DPANSSNSGYRVMFNESGYMYIL 243
           G + FR   D +++  I ++P   D Y        Y D  N  NS    M  +SG +   
Sbjct: 186 GNYIFRF-SDLSVLSLIYHVPQVSDIYWPDPDQNLYQDGRNQYNSTRLGMLTDSGVLASS 244

Query: 244 RRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSV---AWSEPENICV 300
               G+  L    V P      R TL+ DG    Y    + + +WSV   A ++P NI  
Sbjct: 245 DFADGQ-ALVASDVGPGVK--RRLTLDPDGNLRLYSM-NDSDGSWSVSMVAMTQPCNI-- 298

Query: 301 NIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGY 360
                   G CG N IC       P C+CP GY+  +  +    C      +C      Y
Sbjct: 299 -------HGLCGPNGICHYSPT--PTCSCPPGYATRNPGNWTEGCMAIVNTTC----DRY 345

Query: 361 KKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDC--CWFKKLPL 418
            K    F  L  T++  SD +     +   C++ C+SDC C    +Q+    C+ K    
Sbjct: 346 DKRSMRFVRLPNTDFWGSDQQHLLSVSLRTCRDICISDCTCKGFQYQEGTGSCYPKAYLF 405

Query: 419 SNGMTDGRLTSKAFMKYKN----------KGDDPPSVPRPPDPE--DKKKRKMMNATGSV 466
           S            ++K             + D   SVPR  D +  +K  R+        
Sbjct: 406 SGRTYPTSDVRTIYLKLPTGVSVSNALIPRSDVFDSVPRRLDCDRMNKSIREPFPDVHKT 465

Query: 467 LLGSSV-FVNFALVCAF--------GLSFFFIYKKK------WIRNSPGDGTIETNLPCF 511
             G S  F  +  + AF          ++FF+ K++      W  +  G   + +N   +
Sbjct: 466 GGGESKWFYFYGFIAAFFVVEVSFISFAWFFVLKRELRPSELWA-SEKGYKAMTSNFRRY 524

Query: 512 SYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 571
           SY+EL +AT  FK E+GRG  G VYKGV+   R     VAVKKL+ V Q G++ F+ E+ 
Sbjct: 525 SYRELVKATRKFKVELGRGESGTVYKGVLEDDR----HVAVKKLENVRQ-GKEVFQAELS 579

Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQI 628
           VIG+ +H NLVR+ GFC EG +RLLV E++ NG+LA+ LF   GN+   W  R NIA  +
Sbjct: 580 VIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGV 639

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
           A+GL YLH +C   +IHCD+KP+NILLD  +  +I+DFGL KLL    S    + +RGT 
Sbjct: 640 AKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTL 699

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG--EEYAILTDWA------F 740
           GY+APEW  +  ITAKVDVYS+GV+LLE+++  +  ++  G  E +++L           
Sbjct: 700 GYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKL 759

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
           +      +D  ++  +    +      L+ +++ C++ED S RPTM+  +Q L
Sbjct: 760 EGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812

Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  321 bits (823), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 264/830 (31%), Positives = 406/830 (48%), Gaps = 97/830 (11%)

Query: 12  LFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLL 71
            F + F++H S A +  T+    TL+      T +S  G +  GF +    +N    F +
Sbjct: 10  FFFICFFIHGSSAVD--TISGDFTLSG---DQTIVSSDGTYEMGFFKPGSSSN----FYI 60

Query: 72  SIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVA 131
            ++Y  + ++T++W   N+D+  +    S  K++  + ++L+      VWS+ ++  T +
Sbjct: 61  GMWYKQL-SQTILWVA-NRDKAVSDKNSSVFKISNGNLILLDGNYQTPVWSTGLN-STSS 117

Query: 132 VGHM----NDTGNFVL----ASSSSSKLWDSFSNPSDTLLPGQTME------TKQGLFSR 177
           V  +     D GN VL    +S S++ LW SF +P DT LPG  +         Q L S 
Sbjct: 118 VSALEAVLQDDGNLVLRTGGSSLSANVLWQSFDHPGDTWLPGVKIRLDKRTGKSQRLTSW 177

Query: 178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNES 237
           KS  + S G F   L  D +    I      +  + Y+ SG ++P +        M    
Sbjct: 178 KSLEDPSPGLFSLEL--DESTAYKI----LWNGSNEYWSSGPWNPQSRIFDSVPEM--RL 229

Query: 238 GYMYILRRNGGRFDLTTESVVPAADF----YYRATLNFDGVFAQYFYPKNGNENWSVAWS 293
            Y+Y    N   F  TT+S    + +      R  ++  G   Q+ + + GN+ W++ WS
Sbjct: 230 NYIY----NFSFFSNTTDSYFTYSIYNQLNVSRFVMDVSGQIKQFTWLE-GNKAWNLFWS 284

Query: 294 EPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLL-----DENDRYGSCKPD 348
           +P   C           CG   ICS  S+  P C CP+G+  +     D  D    C   
Sbjct: 285 QPRQQC------QVYRYCGSFGICSDKSE--PFCRCPQGFRPMSQKDWDLKDYSAGCVRK 336

Query: 349 FELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQD 408
            EL C    +G   + F    ++L +    +SE     +   C ++C  DC C A  + +
Sbjct: 337 TELQC---SRGDINQFFRLPNMKLAD----NSEVLTRTSLSICASACQGDCSCKAYAYDE 389

Query: 409 ---DCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGS 465
               C  + K  L+    +   +       +    D P+V       +K           
Sbjct: 390 GSSKCLVWSKDVLNLQQLEDENSEGNIFYLRLAASDVPNVGASGKSNNK------GLIFG 443

Query: 466 VLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKE 525
            +LGS       LV    +      ++K +R   GDGT    L  FSY+EL+ AT NF +
Sbjct: 444 AVLGS--LGVIVLVLLVVILILRYRRRKRMRGEKGDGT----LSAFSYRELQNATKNFSD 497

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G G FG V+KG +      ++ +AVK+L+ + Q GEK+F+ EVV IG   H NLVRL 
Sbjct: 498 KLGGGGFGSVFKGAL----PDSSDIAVKRLEGISQ-GEKQFRTEVVTIGTIQHVNLVRLR 552

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCS 640
           GFC EG  +LLVY+++ NG+L S LF N     +   W LR  IA   ARGL YLH++C 
Sbjct: 553 GFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLAYLHDECR 612

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             IIHCDIKP+NILLD  +  +++DFGLAKL+  + S+ + T +RGT+GY+APEW     
Sbjct: 613 DCIIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRVL-TTMRGTRGYLAPEWISGVA 671

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK-----LDDLVEGD 755
           ITAK DVYS+G++L E++S R++ +    E+      WA      +      +D  +EGD
Sbjct: 672 ITAKADVYSYGMMLFELVSGRRNTEQSENEKVRFFPSWAATILTKDGDIRSLVDPRLEGD 731

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNP 805
                DI+ V +   V+ WCIQ++ S RP M +V+Q+LEGV+EV+ PP P
Sbjct: 732 AV---DIEEVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  296 bits (759), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 160/343 (46%), Positives = 226/343 (65%), Gaps = 23/343 (6%)

Query: 484 LSFFFIYKKKWIRNSPGDGTIETN-------LPC-FSYKELEEATDNFKEEVGRGSFGIV 535
           ++F    +KK I  +P + + E N       +P  F+YK+L+ AT+NF  ++G+G FG V
Sbjct: 448 VAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSV 507

Query: 536 YKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL 595
           Y+G    T    + +AVKKL+ + Q G+KEF+ EV +IG  HH +LVRL GFC EG +RL
Sbjct: 508 YEG----TLPDGSRLAVKKLEGIGQ-GKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRL 562

Query: 596 LVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ 651
           L YEFL+ G+L  ++F    G++   W+ R NIA   A+GL YLHEDC A+I+HCDIKP+
Sbjct: 563 LAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPE 622

Query: 652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFG 711
           NILLDD +NA++SDFGLAKL+T  QS  + T +RGT+GY+APEW  N  I+ K DVYS+G
Sbjct: 623 NILLDDNFNAKVSDFGLAKLMTREQSH-VFTTMRGTRGYLAPEWITNYAISEKSDVYSYG 681

Query: 712 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI-KCVEKLVM 770
           ++LLE+I  RK++D     E      +AF      KL D+V+G M+ ++   + V++ + 
Sbjct: 682 MVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMK 741

Query: 771 VSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSMG 813
            ++WCIQED   RP+M KV+QMLEGV  V  PP+    SS+MG
Sbjct: 742 TALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPS----SSTMG 780

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score =  295 bits (756), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 242/794 (30%), Positives = 373/794 (46%), Gaps = 127/794 (15%)

Query: 44  TWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVK 103
           T LS    F  GF       N +  + L I Y+++P  T VW   N+ +  + P  S ++
Sbjct: 32  TILSFKAIFRLGFFST---TNGSSNWYLGISYASMPTPTHVWVA-NRIRPVSDPDSSTLE 87

Query: 104 LTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLL 163
           LT+   L++++ +   VW ++           ++TGN +L +   S +W SF NP+DT L
Sbjct: 88  LTSTGYLIVSNLRDGVVWQTDNKQPGTDF-RFSETGNLILINDDGSPVWQSFDNPTDTWL 146

Query: 164 PGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT--YD 221
           PG  +     + S +S  + S G +  RL             P+ + +   Y   T  + 
Sbjct: 147 PGMNVTGLTAMTSWRSLFDPSPGFYSLRLS------------PSFNEFQLVYKGTTPYWS 194

Query: 222 PANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYY--------------RA 267
             N +   + V   E    YI R +            P A F+Y              R 
Sbjct: 195 TGNWTGEAF-VGVPEMTIPYIYRFH------FVNPYTPTASFWYIVPPLDSVSEPRLTRF 247

Query: 268 TLNFDGVFAQYFYPKNGNENWSVAWSEPENIC--VNIGGEMGSGACGFNSICSLDSDRRP 325
            +  +G   QY +     ++W++ W +PE+ C   N+ G++G         CS  S+   
Sbjct: 248 MVGANGQLKQYTWDPQ-TQSWNMFWLQPEDPCRVYNLCGQLG--------FCS--SELLK 296

Query: 326 KCACPKGYSLLDE-----NDRYGSCKPDFELSCWGGGQGYKKELFDF-------HELQLT 373
            CAC +G+   ++     +D    C+ +       G  G K + F+         +++++
Sbjct: 297 PCACIRGFRPRNDAAWRSDDYSDGCRRE------NGDSGEKSDTFEAVGDLRYDGDVKMS 350

Query: 374 NWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFM 433
              +S S          C  +CL +  C     ++     K L          L S   +
Sbjct: 351 RLQVSKS---------SCAKTCLGNSSCVGFYHKEKSNLCKIL----------LESPNNL 391

Query: 434 KYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSV-LLGSSVFVNFALVCAFGLSFFFIYKK 492
           K  +KG+   S+             + +  GS+ +LG ++ V   L+           + 
Sbjct: 392 K-NSKGNISKSI-----------IILCSVVGSISVLGFTLLVPLILLKRSRKRKKTRKQD 439

Query: 493 KWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAV 552
           +       DG    NL  FS+KEL+ AT+ F ++VG G FG V+KG   T   S+T VAV
Sbjct: 440 E-------DGFAVLNLKVFSFKELQSATNGFSDKVGHGGFGAVFKG---TLPGSSTFVAV 489

Query: 553 KKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG 612
           K+L+R    GE EF+ EV  IG   H NLVRL GFC E  +RLLVY+++  G+L+S+L  
Sbjct: 490 KRLERP-GSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYL-S 547

Query: 613 NLKP---SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
              P   SW  R  IA   A+G+ YLHE C   IIHCDIKP+NILLD  YNA++SDFGLA
Sbjct: 548 RTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLA 607

Query: 670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE-- 727
           KLL  + S+ + T +RGT GYVAPEW     IT K DVYSFG+ LLE+I  R++  +   
Sbjct: 608 KLLGRDFSRVLAT-MRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSD 666

Query: 728 -MGEEYAILTDWAFDCYRNEKL-----DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPS 781
            +GE+      W F  +   ++     D +V+  +    + + V ++  V+IWCIQ++  
Sbjct: 667 TLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEE 726

Query: 782 LRPTMKKVLQMLEG 795
           +RP M  V++MLEG
Sbjct: 727 IRPAMGTVVKMLEG 740

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score =  285 bits (729), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 244/862 (28%), Positives = 408/862 (47%), Gaps = 105/862 (12%)

Query: 1   MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVD 60
           M  +  +++FLL        +++ Q++ T+  G+TL   ++  T +S    F  GF    
Sbjct: 1   MILSVFFYMFLLHIRRLDCFVAV-QDSKTLFKGSTLINDSHGETLVSAGQRFELGF--FT 57

Query: 61  EENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQV 120
              ++++   L I++ N+   TVVW  +   ++P + R     ++ D  L + D +G+  
Sbjct: 58  PNGSSDERRYLGIWFYNLHPLTVVWVANR--ESPVLDRSCIFTISKDGNLEVIDSKGRVY 115

Query: 121 WSSEIDIGTVAVGHM---NDTGNFVLAS--SSSSKLWDSFSNPSDTLLPGQTMETKQGLF 175
           W + +   +V+   M    D GN VL S  + ++ +W SF NP+DT LPG  M+    L 
Sbjct: 116 WDTGVKPSSVSAERMVKLMDNGNLVLISDGNEANVVWQSFQNPTDTFLPGMRMDENMTLS 175

Query: 176 SRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFN 235
           S +S  + S G F F++ ++ +    I           Y+ SG         SG  +  +
Sbjct: 176 SWRSFNDPSHGNFTFQMDQEEDKQFIIWKRSM-----RYWKSGI--------SGKFIGSD 222

Query: 236 ESGYM--YILRRNGGRFDLTTESVVPAADFYY---RATLNFDGVFAQYFYPKNGNENWSV 290
           E  Y   Y L        +   SV P     Y   R T++  G  AQYF   +G   W+ 
Sbjct: 223 EMPYAISYFLSNFTETVTVHNASVPPLFTSLYTNTRFTMSSSGQ-AQYFR-LDGERFWAQ 280

Query: 291 AWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGY--SLLDE---NDRYGSC 345
            W+EP + C          ACG  +  S +S     C C  G+  + L++    D  G C
Sbjct: 281 IWAEPRDECSVYN------ACG--NFGSCNSKNEEMCKCLPGFRPNFLEKWVKGDFSGGC 332

Query: 346 KPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVI 405
             +  + C   G        +   +++     S   +F  +NE +C+  CL++C C A  
Sbjct: 333 SRESRI-CGKDGVVVGDMFLNLSVVEVG----SPDSQFDAHNEKECRAECLNNCQCQAYS 387

Query: 406 FQD-------DCCWFKKLPLSNGMTDGRLTSK-AFMKYKNKGDDPPSVPRPPDPEDKKKR 457
           +++         CW     L+N + +G L S+  F++         +VP      ++ + 
Sbjct: 388 YEEVDILQSNTKCWIWLEDLNN-LKEGYLGSRNVFIRV--------AVPDIGSHVERGRG 438

Query: 458 KMMNA-TGSVLLGSSVFVNFALVCAFG--LSFFFIYKKKWIRNSPG-------------- 500
           +   A T  VL+    F + A++       S+ F+ ++K +    G              
Sbjct: 439 RYGEAKTPVVLIIVVTFTSAAILVVLSSTASYVFLQRRK-VNKELGSIPRGVHLCDSERH 497

Query: 501 ------------DGTIETNLPCFSYKELEEATDNFKE--EVGRGSFGIVYKGVILTTRTS 546
                       D +   ++P F  + +  AT NF    ++G+G FG VYKG+       
Sbjct: 498 IKELIESGRFKQDDSQGIDVPSFELETILYATSNFSNANKLGQGGFGPVYKGMF----PG 553

Query: 547 TTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL 606
              +AVK+L R    G +EFKNEVV+I +  H+NLVRLLG+C  G+ +LL+YE++ + +L
Sbjct: 554 DQEIAVKRLSRCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVAGEEKLLLYEYMPHKSL 613

Query: 607 ASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             F+F      +  W +R NI   IARGLLYLH+D   +IIH D+K  NILLD+  N +I
Sbjct: 614 DFFIFDRKLCQRLDWKMRCNIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKI 673

Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
           SDFGLA++   +++ A    + GT GY++PE+      + K DV+SFGV+++E IS +++
Sbjct: 674 SDFGLARIFGGSETSANTNRVVGTYGYMSPEYALEGLFSFKSDVFSFGVVVIETISGKRN 733

Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
                 E+   L   A+D ++ E+  +L++  ++   + +   K + V + C+QEDP+ R
Sbjct: 734 TGFHEPEKSLSLLGHAWDLWKAERGIELLDQALQESCETEGFLKCLNVGLLCVQEDPNDR 793

Query: 784 PTMKKVLQMLEGVVEVSLPPNP 805
           PTM  V+ ML G  E +  P P
Sbjct: 794 PTMSNVVFML-GSSEAATLPTP 814

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  278 bits (710), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 242/873 (27%), Positives = 378/873 (43%), Gaps = 134/873 (15%)

Query: 9   IFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDL 68
           ++L   L F+L+ S    N T+  G +L  G N    +SP   F  GF       +    
Sbjct: 9   LYLSLFLYFFLYESSMAAN-TIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHR--- 64

Query: 69  FLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIG 128
             L I+Y NI  K VVW  +     P   +   + ++ D  LVL D +   VWSS I+  
Sbjct: 65  -FLGIWYGNIEDKAVVWVANR--ATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESS 121

Query: 129 TV----AVGHMNDTGNFVLASSSSSK-LWDSFSNPSDTLLPGQTMETK------QGLFSR 177
           T      V  ++DTGNFVL+ + + + +W+SF++P+DT LP   +             S 
Sbjct: 122 TTNNNNRVVSIHDTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSW 181

Query: 178 KSETNFSRGRFQFRLLKDG--NLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFN 235
           +SET+ S G +   +   G   +VL   N          + SG ++ A    +G   M  
Sbjct: 182 RSETDPSPGNYSLGVDPSGAPEIVLWEGN------KTRKWRSGQWNSA--IFTGIPNMSL 233

Query: 236 ESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNE--------- 286
            + Y+Y        F L++         Y+    +   V  ++    NG E         
Sbjct: 234 LTNYLY-------GFKLSSPPD-ETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETL 285

Query: 287 -NWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSC 345
             W+   SEP++ C           CG   IC +       C+C  GY  +   +    C
Sbjct: 286 KKWTKFQSEPDSECDQYN------RCGKFGICDMKGSN-GICSCIHGYEQVSVGNWSRGC 338

Query: 346 KPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAA-- 403
           +    L C       + E      ++L ++ + +     P +   C+  CL +C C A  
Sbjct: 339 RRRTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNLVDPED---CRERCLRNCSCNAYS 395

Query: 404 -------VIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKK 456
                  +I+  D    ++          RL                      D E  + 
Sbjct: 396 LVGGIGCMIWNQDLVDLQQFEAGGSSLHIRLA---------------------DSEVGEN 434

Query: 457 RKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNS------------------ 498
           RK       + +  +V V   L+  F L  +   +KK +  +                  
Sbjct: 435 RKT-----KIAVIVAVLVGVILIGIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKS 489

Query: 499 ---------------PGDGTIETNLPCFSYKELEEATDNF--KEEVGRGSFGIVYKGVIL 541
                           G     + LP FS   +  AT++F  + E+GRG FG VYKGV+ 
Sbjct: 490 KETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLE 549

Query: 542 TTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL 601
             R     +AVK+L      G  EFKNE+++I +  H+NLVRLLG C EG+ ++LVYE++
Sbjct: 550 DGR----EIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYM 605

Query: 602 NNGTLASFLFGNLKPS---WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY 658
            N +L  FLF   K +   W LR +I   IARGLLYLH D   +IIH D+K  N+LLD  
Sbjct: 606 PNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAE 665

Query: 659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
            N +ISDFG+A++   NQ++A    + GT GY++PE+      + K DVYSFGVLLLEI+
Sbjct: 666 MNPKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIV 725

Query: 719 SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQE 778
           S +++  +    E+  L  +A+  Y + + ++LV+  +      +   + + V++ C+Q+
Sbjct: 726 SGKRNTSLR-SSEHGSLIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQD 784

Query: 779 DPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSS 811
             + RP M  VL MLE        P    F+S+
Sbjct: 785 SAAERPNMASVLLMLESDTATLAAPRQPTFTST 817

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  276 bits (705), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 230/787 (29%), Positives = 367/787 (46%), Gaps = 114/787 (14%)

Query: 77  NIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGK-QVWSSEIDIGTVAVGHM 135
           ++ + + +W + N+D +P    G+ + LT     V+ D + +  VWS+ +    V    +
Sbjct: 79  HVDSGSTIW-SSNRD-SPVSSSGT-MNLTPQGISVIEDGKSQIPVWSTPVLASPVKSLRL 135

Query: 136 NDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLK- 194
            D GN +L    +  LW+SF  P+D+++ GQ ++    L    S ++FS G ++F + + 
Sbjct: 136 TDAGNLLLLDHLNVSLWESFDFPTDSIVLGQRLKLGMFLSGSVSRSDFSTGDYKFLVGES 195

Query: 195 DGNLVLNIANLPTGDAYDAYYISGTYDPAN-SSNSGYRVMFNESGYMYILRRNGGRFDLT 253
           DG +     N         Y+    +  AN  SN     +   +  + ++ RNG    + 
Sbjct: 196 DGLMQWRGQN---------YWKLRMHIRANVDSNFPVEYLTVTTSGLALMARNG-TVVVV 245

Query: 254 TESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGF 313
             ++ P++DF   A ++  G   ++   +   +N    +S P + C           CG 
Sbjct: 246 RVALPPSSDFRV-AKMDSSG---KFIVSRFSGKNLVTEFSGPMDSC------QIPFVCGK 295

Query: 314 NSICSLD-SDRRPKCACPKGYSLLDENDRYGSCKP-----DFELSCWGGGQGYKKELFDF 367
             +C+LD +     C+CP    +   +   G C P        +SC       +     +
Sbjct: 296 LGLCNLDNASENQSCSCPDEMRM---DAGKGVCVPVSQSLSLPVSC-------EARNISY 345

Query: 368 HELQLT----NWHLSDS-ERFRPYNEVQCKNSCLSDCFCAAVIFQDDC--CW-----FKK 415
            EL L     + H +D  E   P   + C + C  +C C  V +++    C+     F  
Sbjct: 346 LELGLGVSYFSTHFTDPVEHGLPL--LACHDICSKNCSCLGVFYENTSRSCYLVKDSFGS 403

Query: 416 LPL-SNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFV 474
           L L  N   +  L     +  +     PP         + +          VLL  S   
Sbjct: 404 LSLVKNSPENHDLIGYVKLSIRKTNAQPPG-------NNNRGGSSFPVIALVLLPCS--- 453

Query: 475 NFALVCAFGL---------SFFFIYKKKWIRNSPGD------GTIET-NLPC-FSYKELE 517
            F L+ A GL          +  I +K+  R  PG       G+     LP  F ++ELE
Sbjct: 454 GFFLLIALGLLWWRRCAVMRYSSIREKQVTR--PGSFESGDLGSFHIPGLPQKFEFEELE 511

Query: 518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           +AT+NFK ++G G FG VYKG    T    T +AVKK+      G +EF  E+ +IG   
Sbjct: 512 QATENFKMQIGSGGFGSVYKG----TLPDETLIAVKKITNHGLHGRQEFCTEIAIIGNIR 567

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYL 635
           H NLV+L GFC  G+  LLVYE++N+G+L   LF    P   W  R +IA   ARGL YL
Sbjct: 568 HTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYL 627

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H  C  +IIHCD+KP+NILL D++  +ISDFGL+KLL   +S ++ T +RGT+GY+APEW
Sbjct: 628 HSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEES-SLFTTMRGTRGYLAPEW 686

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD------------------ 737
             N+ I+ K DVYS+G++LLE++S RK+         ++  D                  
Sbjct: 687 ITNAAISEKADVYSYGMVLLELVSGRKNCSFR-SRSNSVTEDNNQNHSSTTTTSTGLVYF 745

Query: 738 --WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG 795
             +A D +   +  +L +  +E     +  EKLV +++ C+ E+P+LRPTM  V+ M EG
Sbjct: 746 PLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEG 805

Query: 796 VVEVSLP 802
            + +  P
Sbjct: 806 SIPLGNP 812

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	813
109676362	2037	CCHC-type integrase [Populus trichocarpa	0.918	0.366	0.623	0.0
224099309	801	predicted protein [Populus trichocarpa]	0.958	0.972	0.571	0.0
224103119	799	predicted protein [Populus trichocarpa]	0.976	0.993	0.565	0.0
356575025	800	PREDICTED: G-type lectin S-receptor-like	0.949	0.965	0.560	0.0
255544746	800	ATP binding protein, putative [Ricinus c	0.937	0.952	0.574	0.0
224143661	691	predicted protein [Populus trichocarpa]	0.846	0.995	0.578	0.0
224057535	775	predicted protein [Populus trichocarpa]	0.937	0.983	0.563	0.0
224053032	752	predicted protein [Populus trichocarpa]	0.917	0.992	0.564	0.0
224073224	699	predicted protein [Populus trichocarpa]	0.848	0.987	0.554	0.0
356503089	807	PREDICTED: G-type lectin S-receptor-like	0.968	0.975	0.527	0.0

>gi|109676362|gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/768 (62%), Positives = 582/768 (75%), Gaps = 21/768 (2%)

Query: 8   FIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTND 67
              +L QL     +++AQ NG VP GA++TA  +S +W S SG+FAFGFRQ++ +    D
Sbjct: 43  LTMVLLQL-----MAVAQTNGRVPTGASITATDDSPSWPSASGEFAFGFRQLENK----D 93

Query: 68  LFLLSIFYSNIPAKTVVWYTDNKD--QNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEI 125
            FLLSI+Y  IP KTVVWY   +D   +PAVPRGS+++LT D GL+L DPQG Q+WSS I
Sbjct: 94  YFLLSIWYEKIPEKTVVWYAIGEDPTDDPAVPRGSKLELTDDRGLLLADPQGNQIWSSGI 153

Query: 126 DIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFS 184
             G  V+ G MNDTGNFVL + +S +LW+SF+NP+DTLLP Q ME    + SR++ETNFS
Sbjct: 154 PPGAAVSSGVMNDTGNFVLQNRNSFRLWESFNNPTDTLLPTQIMEVGGVVSSRRTETNFS 213

Query: 185 RGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILR 244
            GRFQ RLL +GNLVLN  NLPT   YD YY S T D +NSSNSGYR++FNESGYMYILR
Sbjct: 214 LGRFQLRLLDNGNLVLNYMNLPTKFVYDDYYSSETSDASNSSNSGYRLIFNESGYMYILR 273

Query: 245 RNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPK--NGNENWSVAWSEPENICVNI 302
           RNG   DLT ++ +P  DFY+RATLNFDGVF QYFYPK  +GN +WS  WS+P++ICVN+
Sbjct: 274 RNGLIEDLT-KTALPTIDFYHRATLNFDGVFTQYFYPKASSGNRSWSSVWSKPDDICVNM 332

Query: 303 GGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKK 362
           G ++GSGACG+NSIC+L +D+RP+C CP+G+SLLD+ND+YGSC PDFELSC   G    +
Sbjct: 333 GADLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTE 392

Query: 363 ELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGM 422
           + +DF EL   +W  SD ER++P NE +C+ SCL+DC C+  IF+D C W KKLPLSNG 
Sbjct: 393 DQYDFVELINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFRDGC-WKKKLPLSNGR 451

Query: 423 TDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAF 482
            D  +  KAF+K+  KG  P   P P  P +KKK  +   TGSV+LG+SVFVNF LV AF
Sbjct: 452 FDIGMNGKAFLKFP-KGYVPLDRPPPQLPGEKKKPDIKFITGSVVLGTSVFVNFVLVGAF 510

Query: 483 GLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILT 542
            L+  FIY+KK  +   G   +ETNL  F+YKEL EAT++FK+EVGRG FG+VYKG I  
Sbjct: 511 CLTSSFIYRKKTEKVKEGGSGLETNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQA 570

Query: 543 TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLN 602
              ST  VAVKKLD+V QDGEKEFK EV VIGQTHHKNLVRLLGFCDEGQNRLLVYEFL+
Sbjct: 571 G--STRVVAVKKLDKVVQDGEKEFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLS 628

Query: 603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
           NGTLA+FLFG  KP+W  RT IAF IARGLLYLHE+C  QIIHCDIKPQNILLD+YYNAR
Sbjct: 629 NGTLANFLFGCSKPNWKQRTQIAFGIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNAR 688

Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           ISDFGLAKLL ++QSK  +TAIRGTKGYVAPEWFRN  IT KVDVYSFGV+LLEII CR+
Sbjct: 689 ISDFGLAKLLVMDQSKT-QTAIRGTKGYVAPEWFRNRPITVKVDVYSFGVMLLEIICCRR 747

Query: 723 SFDIEMGE-EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV 769
           + D+E+GE E  +LTDWA+DCY +  LD L+  D EA NDI  +E+L+
Sbjct: 748 NVDLEIGEVENPVLTDWAYDCYMDGSLDVLIGDDTEAKNDISTLERLL 795

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099309|ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1| predicted protein [Populus trichocarpa]

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/800 (57%), Positives = 561/800 (70%), Gaps = 21/800 (2%)

Query: 1   MASARLYFIF-LLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQV 59
           MA   L+  F LL  LP +   +++Q  G + VGA+L+   N+S WLSPSGDFAFGF  +
Sbjct: 1   MAFPILHLSFSLLIMLPPF---AVSQTGGNITVGASLSTSENTS-WLSPSGDFAFGFHPL 56

Query: 60  DEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQ 119
                   LFLL+I+Y  IP KT+VWY  N D+ PA P GS+  LTA+ G+ L DPQG++
Sbjct: 57  ---YGNKYLFLLAIWYDKIPEKTIVWYA-NGDK-PA-PTGSKAVLTANRGISLTDPQGRE 110

Query: 120 VWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKS 179
           +W SE  IG VA G M D GNFVL    S KLW+SF NP+DTLLP Q ++    L SR+S
Sbjct: 111 LWRSETIIGVVAYGAMTDKGNFVLQDRVSDKLWESFKNPADTLLPSQVLDRGMTLSSRQS 170

Query: 180 ETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGY 239
           E NFS GRFQ +L  DGNL L   NLP+    + YY SGT    +SS+ GY+V+FNESGY
Sbjct: 171 ENNFSMGRFQLKLTDDGNLELATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGY 230

Query: 240 MYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPK--NGNENWSVAWSEPEN 297
           +YILR N   F LT        DFY RATLNFDG+F QY++PK   GNE W+  WS+P+N
Sbjct: 231 LYILRENDQIFSLTQRVTASTGDFYRRATLNFDGLFTQYYHPKASTGNERWTPIWSQPDN 290

Query: 298 ICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGG 357
           IC       GSG CGFNS+C L+SDRRP C CP GYSLLD +D+YGSC+P++  SC    
Sbjct: 291 ICQASFVSSGSGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDE 350

Query: 358 QGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQD-DCCWFKKL 416
               ++L+DF EL  T+W  SD    +P+ E +C+ SCL+DC CA  IF+  D CW KKL
Sbjct: 351 VAPVEDLYDFEELTNTDWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKL 410

Query: 417 PLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNF 476
           PLSNG     L  KA +K +    +P S   P  P +KK R  +   GSV LG SVFVNF
Sbjct: 411 PLSNGRVQTNLDGKALLKVRRSNVNPRS---PYFPNNKKDRDGLILVGSVFLGCSVFVNF 467

Query: 477 ALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVY 536
            LVCA  + FFFIY+++  R    DG +ETNL CF+Y+EL EAT+ FKEE+GRG+FG+VY
Sbjct: 468 LLVCAIFMCFFFIYRRRTKRIPQKDGAVETNLRCFTYQELAEATEGFKEELGRGAFGVVY 527

Query: 537 KGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL 596
           KGV+     S+  VAVKKL+ V +D  +EFK EV VIGQTHHKNLVRLLGFC+EG  RLL
Sbjct: 528 KGVVHI--GSSIVVAVKKLNNVAEDRVREFKTEVNVIGQTHHKNLVRLLGFCEEGDQRLL 585

Query: 597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD 656
           VYEF++NG+L+SF+F + KP W +R  IAF +ARGLLYLHE+CS QIIHCDIKPQNILLD
Sbjct: 586 VYEFMSNGSLSSFIFQDAKPGWKIRIQIAFGVARGLLYLHEECSNQIIHCDIKPQNILLD 645

Query: 657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
           +YYNARISDFGLAKLL L+QS+   TAIRGTKGYVAPEWFRN  +T KVDVYS+GVLLLE
Sbjct: 646 EYYNARISDFGLAKLLLLDQSQT-HTAIRGTKGYVAPEWFRNLPVTVKVDVYSYGVLLLE 704

Query: 717 IISCRKSFDIEMG-EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWC 775
           II CR++ D +   EE AILTDWA+DCYR   LD LV  D  AL+DI+ +E+ +M++ WC
Sbjct: 705 IICCRRNVDSKATIEEQAILTDWAYDCYREGTLDALVGSDTGALDDIEKLERFLMIAFWC 764

Query: 776 IQEDPSLRPTMKKVLQMLEG 795
           IQEDPSLRPTM+KV QMLEG
Sbjct: 765 IQEDPSLRPTMRKVTQMLEG 784

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103119|ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1| predicted protein [Populus trichocarpa]

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/817 (56%), Positives = 576/817 (70%), Gaps = 23/817 (2%)

Query: 1   MASARLYFIF-LLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQV 59
           MA   L+  F LL  LP +   +++Q  G + VGA+L+   N+S WLSPSGDFAFGF Q+
Sbjct: 1   MAFPILHLSFSLLIMLPPF---AVSQTGGNITVGASLSTSDNTS-WLSPSGDFAFGFYQL 56

Query: 60  DEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQ 119
                  DLFLL+I+Y  IP KT+VWY  N D+ PA P GS+  LTA+ G+ L DPQG++
Sbjct: 57  ---YGNKDLFLLAIWYDKIPDKTIVWYA-NGDK-PA-PTGSKAVLTANRGISLTDPQGRE 110

Query: 120 VWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKS 179
           +W SE  IG VA G M DTGNFVL    S KLW+SF NP+DTLLP Q ++    L SR+S
Sbjct: 111 LWRSETIIGDVAYGAMTDTGNFVLRDRVSDKLWESFKNPADTLLPSQVLDRGMTLSSRQS 170

Query: 180 ETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGY 239
           ETNFS GRFQ +L  DGNLVL   NLP+    + YY SGT    +SS+ GY+V+FNESGY
Sbjct: 171 ETNFSMGRFQLKLRDDGNLVLATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGY 230

Query: 240 MYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPK--NGNENWSVAWSEPEN 297
           +YILR+N   F LT        DFY+RATLNFDGVF QY++PK   GNE W+  WS+P+N
Sbjct: 231 LYILRKNDQIFSLTQRVTASTGDFYHRATLNFDGVFTQYYHPKASTGNERWTPIWSQPDN 290

Query: 298 ICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGG 357
           IC       GSG CGFNS+C L+SD RP C CP GYSLLD +D+YGSC+P++  SC    
Sbjct: 291 ICQASSVSAGSGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDE 350

Query: 358 QGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQD-DCCWFKKL 416
               ++L+DF EL  T+W  SD    +P+ E +C+ SCL+DC CA  IF+  D CW KKL
Sbjct: 351 VAPVEDLYDFEELTNTDWPTSDYALLQPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKL 410

Query: 417 PLSNGMTDGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNF 476
           PLSNG     + +KA +K +    +P S   P  P +KK R  +   GSV LG SVFVNF
Sbjct: 411 PLSNGRVQTIVDAKALLKVRRSNVNPRS---PYFPNNKKDRDGLILVGSVFLGCSVFVNF 467

Query: 477 ALVCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVY 536
            LVCA  + FFFIY+++  R    DG +ETNL CF+Y+EL EAT+ FKEE+GRG+FG+VY
Sbjct: 468 LLVCAICMGFFFIYRRRTKRIPQKDGAVETNLRCFTYQELAEATEGFKEELGRGAFGVVY 527

Query: 537 KGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL 596
           +GV+     S+  VAVKKL+ V +D  +EFK EV VIGQTHHKNLVRLLGFC+EG  RLL
Sbjct: 528 RGVVHI--GSSIVVAVKKLNNVAEDRVREFKTEVNVIGQTHHKNLVRLLGFCEEGDQRLL 585

Query: 597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD 656
           VYEF++NG+L+SF+F + KP W +R  IAF +ARGLLYLHED  +QIIHCDIKPQNILLD
Sbjct: 586 VYEFMSNGSLSSFIFQDAKPGWKIRIQIAFGVARGLLYLHED--SQIIHCDIKPQNILLD 643

Query: 657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
           +  NARISDFGLAKLL  +Q+K   TAIRGTKGYVAPEWF+N  +T KVD YSFG+LLLE
Sbjct: 644 ESLNARISDFGLAKLLKTDQTKTT-TAIRGTKGYVAPEWFKNLPVTTKVDTYSFGILLLE 702

Query: 717 IISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWC 775
           ++ CRK+F+I  M E   +L DWA DC +  KL+ LVE D EA+ D+K VE+ VMV+IWC
Sbjct: 703 LVCCRKNFEINAMQEHQIVLADWACDCLKEGKLNLLVEEDEEAMEDMKRVERFVMVAIWC 762

Query: 776 IQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSSM 812
           IQEDPSLRP MKKV+QMLEG V+VS+PP+P  F S++
Sbjct: 763 IQEDPSLRPGMKKVVQMLEGGVQVSVPPDPSSFISTI 799

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575025|ref|XP_003555643.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/813 (56%), Positives = 576/813 (70%), Gaps = 41/813 (5%)

Query: 8   FIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTND 67
            +  L QLP+     ++  N  V +G TL AG     WLSPS DFAFGF Q+D     ND
Sbjct: 13  ILLPLLQLPY-----VSATN--VSIGETLVAGNGGKRWLSPSEDFAFGFHQLD-----ND 60

Query: 68  LFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDI 127
           L+LL+I Y NIP  + +WY +    NPA P+GS+++L    GLVL  PQG ++W+S++  
Sbjct: 61  LYLLAISYQNIPRDSFIWYANG--DNPA-PKGSKLELNQYTGLVLKSPQGVELWTSQLIS 117

Query: 128 GTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGR 187
           GT++ G MNDTGNF L   +S  LWDSFSNP+DTL+P Q ME K  L SR+ E NFSRGR
Sbjct: 118 GTISYGLMNDTGNFQLLDENSQVLWDSFSNPTDTLVPTQIMEVKGTLSSRQKEANFSRGR 177

Query: 188 FQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNG 247
           FQFRLL DGN VLN  NLPT   YDA+YIS TYD  N++NSG++V+F+ SG +YIL+R+G
Sbjct: 178 FQFRLLPDGNAVLNPINLPTNYTYDAHYISATYDSTNTTNSGFQVIFDNSG-LYILKRSG 236

Query: 248 GRFDLTTESVVPAAD-FYYRATLNFDGVFAQYFYPKN--GNENWSVAWSEPENICVNI-G 303
            +  +T      + D +YYRAT+NFDG F    YPKN   N +W+V  + P+NIC+N+ G
Sbjct: 237 EKVYITNPKDALSTDSYYYRATINFDGTFTISNYPKNPASNPSWTVMKTLPDNICMNLLG 296

Query: 304 GEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKE 363
              GSG CGFNSIC+L +D+RPKC+CP+GYS LD  D YGSCKP+ EL C   GQ  + +
Sbjct: 297 NTGGSGVCGFNSICTLKADQRPKCSCPEGYSPLDSRDEYGSCKPNLELGCGSSGQSLQGD 356

Query: 364 LFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMT 423
           L+   E+  T+W +SD E ++PYN   CK SCL DC CA  IF+DD C+ KKLPLSNG  
Sbjct: 357 LYFMKEMANTDWPVSDYELYKPYNSEDCKTSCLQDCLCAVSIFRDDSCYKKKLPLSNGRR 416

Query: 424 DGRLTSKAFMKYKNKGDDPPSVPRPPDP--EDKKKRK---MMNATGSVLLGSSVFVNFAL 478
           D  + + AF+K    G        PP+P  E+KK +K    +    SVLLG SVF  F L
Sbjct: 417 DRAVGASAFIKLMKNG----VSLSPPNPFIEEKKYKKDQDTLITVISVLLGGSVF--FNL 470

Query: 479 VCAFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKG 538
           V A  + F+F Y KK   +S      E+NL  F++ EL +ATDNFKEE+GRGS GIVYKG
Sbjct: 471 VSAVWVGFYFYYNKK---SSTNKTATESNLCSFTFAELVQATDNFKEELGRGSCGIVYKG 527

Query: 539 VILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY 598
                 T+   +AVKKLD+V +D +KEFK EV VIGQTHHK+LVRLLG+CDE Q+R+LVY
Sbjct: 528 T-----TNLATIAVKKLDKVLKDCDKEFKTEVNVIGQTHHKSLVRLLGYCDEEQHRILVY 582

Query: 599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY 658
           EFL+NGTLA+FLFG+ KP+WN R  IAF IARGL+YLHE+C  QIIHCDIKPQNILLD+ 
Sbjct: 583 EFLSNGTLANFLFGDFKPNWNQRVQIAFGIARGLVYLHEECCTQIIHCDIKPQNILLDEQ 642

Query: 659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
           YNARISDFGL+KLL +N+S    T IRGTKGYVAP+WFR++ IT KVDVYSFGVLLLEII
Sbjct: 643 YNARISDFGLSKLLKINESHT-ETGIRGTKGYVAPDWFRSAPITTKVDVYSFGVLLLEII 701

Query: 719 SCRKSFDIEMG-EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQ 777
            CR++ D E+G EE AILTDWA+DCYR  ++D L+E D EA++D   +E+ VMV+IWC+Q
Sbjct: 702 CCRRNVDGEVGNEEKAILTDWAYDCYRAGRIDILLENDDEAIDDTNRLERFVMVAIWCLQ 761

Query: 778 EDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSS 810
           EDPSLRP MKKV+ MLEG+  V++PP+P P++S
Sbjct: 762 EDPSLRPPMKKVMLMLEGIAPVTIPPSPSPYTS 794

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544746|ref|XP_002513434.1| ATP binding protein, putative [Ricinus communis] gi|223547342|gb|EEF48837.1| ATP binding protein, putative [Ricinus communis]

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/781 (57%), Positives = 554/781 (70%), Gaps = 19/781 (2%)

Query: 24  AQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTV 83
           AQN  T+ VG  L A   + +WLSPSGDFAFGFRQ++ +N    L+LL+I Y+ I  KT+
Sbjct: 23  AQNGDTIIVGDFLAAADPAESWLSPSGDFAFGFRQLENKN----LYLLAICYNKISDKTI 78

Query: 84  VWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVL 143
           VWY +  D  PA P GS+V+LTAD GLVL  PQGK++W S I+IG  A G MNDTGNF +
Sbjct: 79  VWYANGDD--PA-PTGSKVELTADRGLVLTSPQGKEIWKSGINIGDAARGMMNDTGNFRI 135

Query: 144 ASSSSSKLWDSFSNPSDTLLPGQTMETK-QGLFSRKSETNFSRGRFQFRLLKDGNLVLNI 202
            ++   KLW +F +P DTLLPGQ +E   + L SR  ETNFSRGRFQFRL+ DGN VLN 
Sbjct: 136 VNTGGEKLWQTFDDPKDTLLPGQALERGGKILSSRLRETNFSRGRFQFRLIPDGNGVLNA 195

Query: 203 ANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAAD 262
            NL TGDAYDAYY + T D AN SN+G R++FNESGY+Y LR +  R  +T E VVP  +
Sbjct: 196 NNLRTGDAYDAYYWTNTVD-ANLSNAGLRIVFNESGYLYTLRASNKRELITPERVVPTTE 254

Query: 263 FYYRATLNFDGVFAQYFYPKNG--NENWSVAWSEPENICVNIGGEMGSGACGFNSICSLD 320
           +Y+R TLNFDGV  QY +PKN   N NWS+ +S PENIC  I  ++G+G CGFNS+C L+
Sbjct: 255 YYHRVTLNFDGVLTQYSHPKNSTDNGNWSIIFSAPENICFLIT-DIGTGPCGFNSVCQLN 313

Query: 321 SDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDS 380
           +D+R  C CP  +S +D  D Y  CKPDF             E +DF EL  T+W  SD 
Sbjct: 314 ADQRAICRCPPRFSSVDPGDDYAGCKPDFSTQFCEDAPSTSPEDYDFLELTNTDWPTSDY 373

Query: 381 ERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGD 440
           ER+  YN  +C+ +C+ DCFC  V+F+  C W KKLPLSNG    ++  +AF+K +    
Sbjct: 374 ERYDSYNIEECQKACIQDCFCNVVVFRGSC-WKKKLPLSNGRQSEKVNGRAFIKVRKDDY 432

Query: 441 DPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPG 500
               +P  P P  K+ +  +    SVLLGSSVF+NF L+      F F Y KK      G
Sbjct: 433 MGRGLPPRPFPNAKEDQDSLVLVISVLLGSSVFINFILIGLVTFCFLFFYHKKSTGIPQG 492

Query: 501 DGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ 560
           +   ++NL CFSYKEL EAT  FKEE+GRGSFGIVYKG+I     +T  VAVKKLDRV +
Sbjct: 493 E---KSNLRCFSYKELVEATKGFKEELGRGSFGIVYKGLI--EMGTTVPVAVKKLDRVVE 547

Query: 561 DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNL 620
            GEKE+K EV  IGQTHHKNLV+LLGFCDEGQ +LLVYE L+NGTLA+FLFG+ K SW  
Sbjct: 548 YGEKEYKAEVKAIGQTHHKNLVQLLGFCDEGQQKLLVYELLSNGTLANFLFGDTKLSWKQ 607

Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
           RT IAF IARGL+YLHE+C+ QIIHCDIKPQNIL+D+YY+A+ISDFGLAKLL L+QS+  
Sbjct: 608 RTQIAFGIARGLVYLHEECNTQIIHCDIKPQNILVDEYYDAKISDFGLAKLLLLDQSQTF 667

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 740
            T IRGTKGYVAPEWFRN  IT KVD YSFGVLLLEII  R+S D E+  E AILTDWA+
Sbjct: 668 -TTIRGTKGYVAPEWFRNVPITVKVDAYSFGVLLLEIICSRRSVDTEISGERAILTDWAY 726

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           DCY   ++DDLVE D EAL+D+K VE+ +MV+IWCIQEDP+LRPTMK V+ MLEG+++V+
Sbjct: 727 DCYMEGRIDDLVENDEEALSDLKKVERFLMVAIWCIQEDPTLRPTMKTVILMLEGIIQVA 786

Query: 801 L 801
           +
Sbjct: 787 V 787

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143661|ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1| predicted protein [Populus trichocarpa]

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/785 (57%), Positives = 547/785 (69%), Gaps = 97/785 (12%)

Query: 27  NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWY 86
           NG++PVGA +TA  ++ +WLS SG+FAFGF+ ++ +    D FLLSI+Y+ IP KT+VWY
Sbjct: 1   NGSMPVGAFITATDDAPSWLSSSGEFAFGFQPLEYK----DHFLLSIWYAKIPEKTIVWY 56

Query: 87  TDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASS 146
            +    NPA PR S+V+L  D GLVL DPQG  +WSS   +GTV+ G MNDTGNFVL +S
Sbjct: 57  ANG--DNPA-PRESKVELRGDSGLVLTDPQGNLIWSSGSLLGTVSSGVMNDTGNFVLQNS 113

Query: 147 SSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLP 206
           +S +LW+SFSNP+DTLLP Q ME    + SR++ETNFS GRFQ RLL +GNLVLN  NLP
Sbjct: 114 NSFRLWESFSNPTDTLLPTQIMEVGGVVSSRRTETNFSLGRFQLRLLDNGNLVLNYMNLP 173

Query: 207 TGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYR 266
           T   YD YY S T D +NSSNSGYR++FNESGYMYILRRNG   DLT ++ +P  DFY+R
Sbjct: 174 TKFVYDDYYSSETSDASNSSNSGYRLIFNESGYMYILRRNGLIEDLT-KTALPTIDFYHR 232

Query: 267 ATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRRPK 326
           ATLNFD                                ++GSGACG+NSIC+L +D+RP+
Sbjct: 233 ATLNFDA-------------------------------DLGSGACGYNSICNLKADKRPE 261

Query: 327 CACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFRPY 386
           C CP+G+SLLD+ND+YGSC PDFELSC   G    ++ +DF EL   +W  SD ER++P 
Sbjct: 262 CKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQYDFVELINVDWPTSDYERYKPI 321

Query: 387 NEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPSVP 446
           NE +C+ SCL+DC C+  IF+D C W KKLPLSNG  D  +  KAF+K+           
Sbjct: 322 NEDECRKSCLNDCLCSVAIFRDGC-WKKKLPLSNGRFDIGMNGKAFLKF----------- 369

Query: 447 RPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIET 506
               P+  K  K+                                        G   +ET
Sbjct: 370 ----PKGYKTEKV--------------------------------------KEGGSGLET 387

Query: 507 NLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF 566
           NL  F+YKEL EAT++FK+EVGRG FG+VYKG I     ST  VAVKKLD+V QDGEKEF
Sbjct: 388 NLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTI--QAGSTRVVAVKKLDKVVQDGEKEF 445

Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           K EV VIGQTHHKNLVRLLGFCDEGQNRLLVYEFL+NGTLA+FLFG  KP+W  RT IAF
Sbjct: 446 KTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNWKQRTQIAF 505

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IARGLLYLHE+C  QIIHCDIKPQNILLD+YYNARISDFGLAKLL ++QSK  +TAIRG
Sbjct: 506 GIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKT-QTAIRG 564

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILTDWAFDCYRN 745
           TKGYVAPEWFRN  IT KVDVYSFGV+LLEII CR++ D+E+GE E  +LTDWA+DCY +
Sbjct: 565 TKGYVAPEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTDWAYDCYMD 624

Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNP 805
             LD L+  D EA NDI  +E+L+ V IWCIQEDPSLRPTM+KV QMLEGVVEV   PNP
Sbjct: 625 GSLDVLIGDDTEAKNDISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVVEVPAAPNP 684

Query: 806 YPFSS 810
           +P+SS
Sbjct: 685 FPYSS 689

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057535|ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|222846513|gb|EEE84060.1| predicted protein [Populus trichocarpa]

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/806 (56%), Positives = 563/806 (69%), Gaps = 44/806 (5%)

Query: 6   LYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNT 65
           LYF FLLF  P  L   +AQ NG   VG +LTAG  ++ WLSP+ DFAFGFRQ+D++   
Sbjct: 9   LYFFFLLF--PSSL---VAQRNGNATVGDSLTAGDEATLWLSPAEDFAFGFRQLDKK--- 60

Query: 66  NDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEI 125
            DL+LL+I+Y+ IP KT+VWY  N D+ PA P+ S VKLTA+ G+VLN+PQG ++W S  
Sbjct: 61  -DLYLLAIWYNKIPDKTIVWYA-NGDR-PA-PKKSTVKLTAELGVVLNNPQGGEIWKSGP 116

Query: 126 DIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSR 185
             G  A G MNDTGNF++A+++  KLW SF   +DTLLP Q ME    L SR SETNFS+
Sbjct: 117 GNGEAAYGFMNDTGNFLVANANGEKLWQSFELLTDTLLPTQIMEKGGILSSRLSETNFSQ 176

Query: 186 GRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRR 245
           GRFQFRL+ DGN VLN  NLPTG  Y+AY+ S T D +NSSN+GY+V+FNESGY+Y+LR 
Sbjct: 177 GRFQFRLIPDGNAVLNTINLPTGFPYEAYFWSKTVD-SNSSNAGYQVVFNESGYLYVLRA 235

Query: 246 NGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKN--GNENWSVAWSEPENICVNIG 303
           N  R  LT   VVPA + Y+RATL+FDGVF  Y +PKN  GNENWSV  + PENIC  + 
Sbjct: 236 NNTREALTLGRVVPATENYHRATLHFDGVFVLYSHPKNSPGNENWSVVRTMPENICTVVR 295

Query: 304 GEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKE 363
           G  GSG CG+N +C++ +D+R  C CP+ +SLLD +D YG CKPDF             E
Sbjct: 296 GLKGSGPCGYNGVCTISTDKRAICRCPQRFSLLDPDDPYGGCKPDFPTQVCAEEVPNAPE 355

Query: 364 LFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMT 423
            ++   L   +W  SD E + PYN   CK +CL D FC  ++F +  CW K+LPLSNG  
Sbjct: 356 DYELVPLTNIDWPESDYEMYTPYNIEDCKKACLQDFFCNVIVFGEGTCWKKRLPLSNGRQ 415

Query: 424 DGRLTSKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFG 483
              +   +FMK + KG+   ++P PP P  KK   ++    SVLLG SVF NF LV    
Sbjct: 416 GESVNGASFMKVR-KGNY--TLPGPP-PIPKKNLLVV----SVLLGGSVFFNFVLVGVVS 467

Query: 484 LSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTT 543
            +FFFIY  K+ R    +  +++NL CFSYKEL EAT+ FKEE+GRG+FGIVYKG  LT 
Sbjct: 468 FAFFFIYHNKFTRTPQVERAVQSNLRCFSYKELMEATNGFKEELGRGAFGIVYKG--LTQ 525

Query: 544 RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN 603
             S   VA+KK+DR  ++ +KEFK EV VIG            FCDEGQ+R+LVYEFL+N
Sbjct: 526 IGSGVPVAIKKVDRFVKESDKEFKTEVDVIG------------FCDEGQHRMLVYEFLSN 573

Query: 604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
           G LASFLFG++K SWN RT IAF IARGLLYLH++CS QIIHCDIKPQNILLD++Y+ARI
Sbjct: 574 GALASFLFGDVKLSWNQRTQIAFGIARGLLYLHDECSTQIIHCDIKPQNILLDEHYDARI 633

Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
           +DFGLAKL    Q K       GTKGYVAPEWFRN  IT KVDVY+FGVLLLEII CR+S
Sbjct: 634 ADFGLAKLFRNPQHK-------GTKGYVAPEWFRNMLITVKVDVYNFGVLLLEIICCRRS 686

Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
            D E+GEE AILTDWA+DCY+   +  LVE D EALND+K +E+ VMV+IWCIQEDP+LR
Sbjct: 687 VDTEVGEERAILTDWAYDCYQEGMMHALVESDEEALNDMKKLERFVMVAIWCIQEDPNLR 746

Query: 784 PTMKKVLQMLEGVVEVSLPPNPYPFS 809
           PTMK V+ MLEG+++V +PP P PFS
Sbjct: 747 PTMKMVMLMLEGIIQVPVPPCPSPFS 772

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053032|ref|XP_002297673.1| predicted protein [Populus trichocarpa] gi|222844931|gb|EEE82478.1| predicted protein [Populus trichocarpa]

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/785 (56%), Positives = 551/785 (70%), Gaps = 39/785 (4%)

Query: 27  NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWY 86
           NG   VG +LTAG  ++ WLSP+ DFAFGFRQ+D++    DL+LL+I+Y+ IP KT+VWY
Sbjct: 2   NGNATVGDSLTAGDEATLWLSPAEDFAFGFRQLDKK----DLYLLAIWYNKIPDKTIVWY 57

Query: 87  TDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASS 146
             N D+ PA P+ S VKLTA+ G+VLN+PQG ++W S    G  A G MNDTGNF++A++
Sbjct: 58  A-NGDR-PA-PKKSTVKLTAELGVVLNNPQGGEIWKSGPGNGEAAYGFMNDTGNFLVANA 114

Query: 147 SSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLP 206
           +  KLW SF   +DTLLP Q ME    L SR SETNFS+GRFQFRL+ DGN VLN  NLP
Sbjct: 115 NGEKLWQSFELLTDTLLPTQIMEKGGILSSRLSETNFSQGRFQFRLIPDGNAVLNTINLP 174

Query: 207 TGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYR 266
           TG  Y+AY+ S T D +NSSN+GY+V+FNESGY+Y+LR N  R  LT   VVPA + Y+R
Sbjct: 175 TGFPYEAYFWSKTVD-SNSSNAGYQVVFNESGYLYVLRANNTREALTLGRVVPATENYHR 233

Query: 267 ATLNFDGVFAQYFYPKN--GNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDRR 324
           ATL+FDGVF  Y +PKN  GNENWSV  + PENIC  + G  GSG CG+N +C++ +D+R
Sbjct: 234 ATLHFDGVFVLYSHPKNSPGNENWSVVRTMPENICTVVRGLKGSGPCGYNGVCTISTDKR 293

Query: 325 PKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLSDSERFR 384
             C CP+ +SLLD +D YG CKPDF             E ++   L   +W  SD E + 
Sbjct: 294 AICRCPQRFSLLDPDDPYGGCKPDFPTQVCAEEVPNAPEDYELVPLTNIDWPESDYEMYT 353

Query: 385 PYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGDDPPS 444
           PYN   CK +CL D FC  ++F +  CW K+LPLSNG     +   +FMK + KG+   +
Sbjct: 354 PYNIEDCKKACLQDFFCNVIVFGEGTCWKKRLPLSNGRQGESVNGASFMKVR-KGNY--T 410

Query: 445 VPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTI 504
           +P PP P  KK   ++    SVLLG SVF NF LV     +FFFIY  K+ R    +  +
Sbjct: 411 LPGPP-PIPKKNLLVV----SVLLGGSVFFNFVLVGVVSFAFFFIYHNKFTRTPQVERAV 465

Query: 505 ETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK 564
           ++NL CFSYKEL EAT+ FKEE+GRG+FGIVYKG  LT   S   VA+KK+DR  ++ +K
Sbjct: 466 QSNLRCFSYKELMEATNGFKEELGRGAFGIVYKG--LTQIGSGVPVAIKKVDRFVKESDK 523

Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 624
           EFK EV VIG            FCDEGQ+R+LVYEFL+NG LASFLFG++K SWN RT I
Sbjct: 524 EFKTEVDVIG------------FCDEGQHRMLVYEFLSNGALASFLFGDVKLSWNQRTQI 571

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           AF IARGLLYLH++CS QIIHCDIKPQNILLD++Y+ARI+DFGLAKL    Q K      
Sbjct: 572 AFGIARGLLYLHDECSTQIIHCDIKPQNILLDEHYDARIADFGLAKLFRNPQHK------ 625

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
            GTKGYVAPEWFRN  IT KVDVY+FGVLLLEII CR+S D E+GEE AILTDWA+DCY+
Sbjct: 626 -GTKGYVAPEWFRNMLITVKVDVYNFGVLLLEIICCRRSVDTEVGEERAILTDWAYDCYQ 684

Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPN 804
              +  LVE D EALND+K +E+ VMV+IWCIQEDP+LRPTMK V+ MLEG+++V +PP 
Sbjct: 685 EGMMHALVESDEEALNDMKKLERFVMVAIWCIQEDPNLRPTMKMVMLMLEGIIQVPVPPC 744

Query: 805 PYPFS 809
           P PFS
Sbjct: 745 PSPFS 749

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073224|ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1| predicted protein [Populus trichocarpa]

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/793 (55%), Positives = 539/793 (67%), Gaps = 103/793 (12%)

Query: 21  LSIAQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPA 80
           +++AQ NG VPVGA++TA  +S +WLS SG+FAFGFRQ++ +    D FLLSI+Y  IP 
Sbjct: 1   MAVAQTNGRVPVGASITATDDSPSWLSASGEFAFGFRQLENK----DYFLLSIWYEKIPE 56

Query: 81  KTVVWYTDNKD--QNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDT 138
           KTVVWY   +D   +PAVPRGS+V+LT D GL+L DPQG  +W+S I +G V+ G MNDT
Sbjct: 57  KTVVWYAIGEDPTDDPAVPRGSKVELTDDRGLLLADPQGNLIWTSRILLGAVSSGVMNDT 116

Query: 139 GNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNL 198
           GNFVL + +S +LW+SF+NP+DTLLP Q ME    + SR++ETNFS GRFQ RLL +GNL
Sbjct: 117 GNFVLQNRNSERLWESFNNPTDTLLPTQIMEAGGVVSSRRTETNFSLGRFQLRLLDNGNL 176

Query: 199 VLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVV 258
           VLN  NL T  AYD YY SGT D +NSSN+GYR++FNESGY  IL R        + S +
Sbjct: 177 VLNSMNLSTKFAYDDYYRSGTSDASNSSNTGYRLLFNESGY--ILWRP-----PPSPSSL 229

Query: 259 PAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICS 318
            +AD +Y                    ++WS  WS+P++ICVN+G ++GSGACG+NSIC+
Sbjct: 230 ISADIHYI-------------------QSWSSVWSKPDDICVNMGADLGSGACGYNSICN 270

Query: 319 LDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGGGQGYKKELFDFHELQLTNWHLS 378
           L +D+RP+C CP+G+SLLD+ND+YGSC PDFELSC   G    ++ +DF EL   +W  S
Sbjct: 271 LKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQYDFVELINVDWPTS 330

Query: 379 DSERFRPYNEVQCKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNK 438
           D ER++P NE    + C   C        +DC                L S A  +    
Sbjct: 331 DYERYKPINE----DECRKSCL-------NDC----------------LCSVAIFR---- 359

Query: 439 GDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNS 498
                      D   KKK  + N    + +    F+ F               K +    
Sbjct: 360 -----------DGCWKKKLPLSNGRFDIGMNGKAFLKFP--------------KGY---- 390

Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
                  TNL  F+YKEL EAT++FK+EVGRG FG+VYKG I     ST  VAVKKLD+V
Sbjct: 391 -------TNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAG--STRVVAVKKLDKV 441

Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSW 618
            QDGEKEFK EV VIGQTHHKNLVRLLGFCDEGQNRLLVYEFL+NGTLA+FLFG  KP+W
Sbjct: 442 VQDGEKEFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNW 501

Query: 619 NLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
             RT IAF IARGLLYLHE+C  QIIHCDIKPQNILLD+YYNARISDFGLAKLL ++QSK
Sbjct: 502 KQRTQIAFGIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSK 561

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILTD 737
             +TAIRGTKGYVAPEWFRN  IT KVDVYSFGV+LLEII CR++ D+E+GE E  +LTD
Sbjct: 562 T-QTAIRGTKGYVAPEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTD 620

Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
           WA+DCY +  LD L+  D EA NDI  +E+L+ V IWCIQEDPSLRPTM+KV QMLEGVV
Sbjct: 621 WAYDCYMDGSLDVLIGDDTEAKNDISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVV 680

Query: 798 EVSLPPNPYPFSS 810
           EV   PNP+P+SS
Sbjct: 681 EVPAAPNPFPYSS 693

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503089|ref|XP_003520344.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/814 (52%), Positives = 551/814 (67%), Gaps = 27/814 (3%)

Query: 1   MASARLYFIFLLFQLPFYLHLSIAQNNGTVPVGATLTAGTNSSTWL--SPSGDFAFGFRQ 58
           MAS+ L  +F LF     L   +AQ    + +G + TAG +++ WL  SPSGDFAFGF  
Sbjct: 1   MASSLL--LFFLFCSVILLPFVVAQTKTNIAIGDSHTAGKSTTPWLVSSPSGDFAFGFLP 58

Query: 59  VDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGK 118
           ++    T D F+L I+Y+NI  +T+VW+  N+D  PA P+GS+V+L+AD GLVL  P G 
Sbjct: 59  LEA---TPDHFILCIWYANIQDRTIVWFA-NRDNKPA-PKGSKVELSADDGLVLTAPNGD 113

Query: 119 QVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRK 178
           ++W++      V+ G  NDTGN VL   +SS  W+SF +  DTLLP QTME  Q L S+ 
Sbjct: 114 KLWNTGGFTARVSSGVFNDTGNLVLLDGASSSTWESFDDYRDTLLPSQTMERGQKLSSKL 173

Query: 179 SETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESG 238
              +F+ GRF+     DGNLV++  NLP+      YY SGT + +N+S++G +++F+ SG
Sbjct: 174 RRNDFNIGRFELFFQNDGNLVMHSINLPSEYVNANYYASGTIE-SNTSSAGTQLVFDRSG 232

Query: 239 YMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPK--NGNENWSVAWSEPE 296
            +YILR N  +++L+    +    FY RATL+FDGVF  Y +PK  +G+  W+  WS P+
Sbjct: 233 DVYILRDNKEKYNLSDGGSISTTQFYLRATLDFDGVFTLYQHPKGSSGSVGWTPVWSHPD 292

Query: 297 NICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLLDENDRYGSCKPDFELSCWGG 356
           NIC +      SG CG+NSICSL   +RP C CPK YSL+D ND  GSCKPDF  SC   
Sbjct: 293 NICKDYLSAASSGVCGYNSICSLGDYKRPICKCPKWYSLVDPNDPNGSCKPDFVQSCSED 352

Query: 357 GQGYKKELFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQ-DDCCWFKK 415
               +++L+DF  L  T+W LSD    +P+ E QC+ SC+ DC C+  IF+  D CW KK
Sbjct: 353 ELSQREDLYDFEVLIDTDWPLSDYVLQKPFTEEQCRQSCMEDCLCSVAIFRLGDSCWKKK 412

Query: 416 LPLSNGMTDGRLT-SKAFMKYKNKGDDPPSVPRPPDPEDKKKRKMMNATGSVLLGSSVFV 474
           LPLSNG  D  L  +KAFMK +    D  S+  PP    K  R  +     VLL  S  +
Sbjct: 413 LPLSNGRVDATLNGAKAFMKVRK---DNSSLVVPPIIVKKNSRNTL----IVLLSGSACL 465

Query: 475 NFALVCAFGLSFFFIY--KKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSF 532
           N  LV A  LS F+++  KKK  R       +ETNL CF+Y+ELEEAT+ F++ +G+G+F
Sbjct: 466 NLILVGAICLSSFYVFWCKKKLRRVGKSGTNVETNLRCFTYEELEEATNGFEKVLGKGAF 525

Query: 533 GIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG 591
           GIVY+GVI     S T VAVK+L+  + ++ +KEFKNE+ VIG THHKNLVRLLGFC+  
Sbjct: 526 GIVYEGVI--NMGSLTLVAVKRLNTFLLEEVQKEFKNELNVIGLTHHKNLVRLLGFCETQ 583

Query: 592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ 651
             RLLVYE+++NGTLAS +F   KPSW LR  IA  +ARGLLYLHE+CS QIIHCDIKPQ
Sbjct: 584 DERLLVYEYMSNGTLASLVFNVEKPSWKLRLQIATGVARGLLYLHEECSTQIIHCDIKPQ 643

Query: 652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFG 711
           NILLDDYYNARISDFGLAK+L +NQS+   TAIRGTKGYVA EWF+N  ITAKVDVYS+G
Sbjct: 644 NILLDDYYNARISDFGLAKILNMNQSRT-NTAIRGTKGYVALEWFKNMPITAKVDVYSYG 702

Query: 712 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMV 771
           VLLLEI+SCRKS + E  EE AILT+WAFDCY    L DLVE D EAL+D+K +EKLVM+
Sbjct: 703 VLLLEIVSCRKSVEFEADEEKAILTEWAFDCYTEGVLHDLVENDKEALDDMKTLEKLVMI 762

Query: 772 SIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNP 805
           ++WC+QEDP LRPTM+ V QMLEGVVEV +PP P
Sbjct: 763 ALWCVQEDPGLRPTMRNVTQMLEGVVEVQIPPCP 796

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	813
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.493	0.488	0.406	2.4e-85
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.728	0.714	0.344	9.4e-82
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.573	0.562	0.369	6.5e-74
TAIR|locus:2182603	872	AT5G35370 [Arabidopsis thalian	0.255	0.238	0.497	6.1e-69
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.377	0.361	0.400	8.5e-69
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.369	0.352	0.375	2.4e-67
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.383	0.370	0.386	8.4e-65
TAIR|locus:2197649	821	AT1G61360 [Arabidopsis thalian	0.364	0.360	0.374	2.4e-62
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.357	0.343	0.383	3.3e-61
TAIR|locus:2137010	849	AT4G11900 [Arabidopsis thalian	0.856	0.819	0.276	2.3e-60

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 755 (270.8 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
 Identities = 179/440 (40%), Positives = 260/440 (59%)

Query:   391 CKNSCLSDCFCAAVIFQD---DCCWFKKLPLSNGMTDGRLTSKAFMKYKNKGXXXXXXXX 447
             CK  C ++C C  + FQ+   +C  F  +   +  T G   S  F+ Y            
Sbjct:   363 CKEFCHNNCSCLGLFFQNSSGNCFLFDYI--GSFKTSGNGGS-GFVSYIKIASTGSGGGD 419

Query:   448 XXXXXXXXXXXMMNATGSVLLGSSVFVNFALVCAFGLSFFFIYKKKWIRNSPGDGTIETN 507
                        ++     +++  +VF+   L+  F ++F    +KK I  +P + + E N
Sbjct:   420 NGEDDGKHFPYVV-----IIVVVTVFIIAVLI--F-VAFRIHKRKKMILEAPQESSEEDN 471

Query:   508 -------LPC-FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF 559
                    +P  F+YK+L+ AT+NF  ++G+G FG VY+G    T    + +AVKKL+ + 
Sbjct:   472 FLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFGSVYEG----TLPDGSRLAVKKLEGIG 527

Query:   560 QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF----GNLK 615
             Q G+KEF+ EV +IG  HH +LVRL GFC EG +RLL YEFL+ G+L  ++F    G++ 
Sbjct:   528 Q-GKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVL 586

Query:   616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
               W+ R NIA   A+GL YLHEDC A+I+HCDIKP+NILLDD +NA++SDFGLAKL+T  
Sbjct:   587 LDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTRE 646

Query:   676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
             QS    T +RGT+GY+APEW  N  I+ K DVYS+G++LLE+I  RK++D     E    
Sbjct:   647 QSHVF-TTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCHF 705

Query:   736 TDWAFDCYRNEKLDDLVEGDMEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
               +AF      KL D+V+G M+ + D+  + V++ +  ++WCIQED   RP+M KV+QML
Sbjct:   706 PSFAFKKMEEGKLMDIVDGKMKNV-DVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQML 764

Query:   794 EGVVEVSLPPNPYPFSSSMG 813
             EGV  V  PP+    SS+MG
Sbjct:   765 EGVFPVVQPPS----SSTMG 780

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
 Identities = 222/644 (34%), Positives = 326/644 (50%)

Query:   186 GRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRR 245
             G + F+L + GNL L        +    Y+  G     +S+ S  R+    +G + I   
Sbjct:   161 GLYSFQLERSGNLTLR------WNTSAIYWNHGLNSSFSSNLSSPRLSLQTNGVVSIFES 214

Query:   246 N--GGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIG 303
             N  GG   + +     +  F +   L+ DG    Y      +   +  WS  +   V   
Sbjct:   215 NLLGGAEIVYSGDYGDSNTFRF-LKLDDDGNLRIYSSASRNSGPVNAHWSAVDQCLVY-- 271

Query:   304 GEMGSGACGFNSICSLDSDRRPKCACP-KGYSLLDENDRYGSCKPDFELSCWGGGQGYKK 362
                  G CG   ICS + D  P C+CP + +  +D NDR   CK   ELS   G      
Sbjct:   272 -----GYCGNFGICSYN-DTNPICSCPSRNFDFVDVNDRRKGCKRKVELSDCSGNT---- 321

Query:   363 ELFDFHELQLTNWHLS-DSERFRPYNEVQCKNSCLSDCFCAAVIFQDDC---CWFKKLPL 418
              + D    +L  +    +SE F   +   C+ +CLS   C A +   D    CW +K P 
Sbjct:   322 TMLDLVHTRLFTYEDDPNSESFFAGSS-PCRANCLSSVLCLASVSMSDGSGNCW-QKHPG 379

Query:   419 S--NGMTDGRLTSKAFMKYKNKGXXXXXXXXXXXXXXXXXXXMMNATGSVLLGSSVFVNF 476
             S   G     + S +++K                        +     +V+ G    +  
Sbjct:   380 SFFTGYQWPSVPSTSYVKVCGPVVANTLERATKGDDNNSKVHLWIVAVAVIAG---LLGL 436

Query:   477 ALVCAFGLSFFFIYKKKWIRNSPGDGTI---ETNLPC-FSYKELEEATDNFKEEVGRGSF 532
               V   GL +    K           T+    +  P  F+YKEL+  T +FKE++G G F
Sbjct:   437 VAV-EIGLWWCCCRKNPRFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGF 495

Query:   533 GIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ 592
             G VY+GV+    T+ T VAVK+L+ + Q GEK+F+ EV  I  THH NLVRL+GFC +G+
Sbjct:   496 GTVYRGVL----TNRTVVAVKQLEGIEQ-GEKQFRMEVATISSTHHLNLVRLIGFCSQGR 550

Query:   593 NRLLVYEFLNNGTLASFLF--GNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIK 649
             +RLLVYEF+ NG+L +FLF   + K  +W  R NIA   A+G+ YLHE+C   I+HCDIK
Sbjct:   551 HRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIK 610

Query:   650 PQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYS 709
             P+NIL+DD + A++SDFGLAKLL    ++   +++RGT+GY+APEW  N  IT+K DVYS
Sbjct:   611 PENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYS 670

Query:   710 FGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR--NEK--LDDLVEGDMEALNDIKCV 765
             +G++LLE++S +++FD+     +   + WA++ +   N K  LD  +  D     D++ V
Sbjct:   671 YGMVLLELVSGKRNFDVSEKTNHKKFSIWAYEEFEKGNTKAILDTRLSEDQTV--DMEQV 728

Query:   766 EKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFS 809
              ++V  S WCIQE P  RPTM KV+QMLEG+ E+  P  P   S
Sbjct:   729 MRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCPKTIS 772

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 189/512 (36%), Positives = 273/512 (53%)

Query:   311 CGFNSICSLDSDRRPKCACPKGYSLLDEND----RYGS-CKPDFELSCWGGGQGYKKELF 365
             CG   ICS  S+  P C CP+G+  + + D     Y + C    EL C    +G   + F
Sbjct:   296 CGSFGICSDKSE--PFCRCPQGFRPMSQKDWDLKDYSAGCVRKTELQC---SRGDINQFF 350

Query:   366 DFHELQLTNWHLSDSERFRPYNEVQ-CKNSCLSDCFCAAVIFQDDCCWFKKLPLSNGMTD 424
                  +L N  L+D+        +  C ++C  DC C A  + +     K L  S  +  
Sbjct:   351 -----RLPNMKLADNSEVLTRTSLSICASACQGDCSCKAYAYDEGSS--KCLVWSKDV-- 401

Query:   425 GRLTSKAFMKYKNKGXXXXXXXXXXXXXXXXXXXMMNATGSV---LLGS-SVFVNFALVC 480
               L  +      ++G                     N  G +   +LGS  V V   LV 
Sbjct:   402 --LNLQQLEDENSEGNIFYLRLAASDVPNVGASGKSNNKGLIFGAVLGSLGVIVLVLLVV 459

Query:   481 AFGLSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI 540
                L +    ++K +R   GDGT    L  FSY+EL+ AT NF +++G G FG V+KG +
Sbjct:   460 ILILRY---RRRKRMRGEKGDGT----LSAFSYRELQNATKNFSDKLGGGGFGSVFKGAL 512

Query:   541 LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF 600
                   ++ +AVK+L+ + Q GEK+F+ EVV IG   H NLVRL GFC EG  +LLVY++
Sbjct:   513 ----PDSSDIAVKRLEGISQ-GEKQFRTEVVTIGTIQHVNLVRLRGFCSEGSKKLLVYDY 567

Query:   601 LNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
             + NG+L S LF N     +   W LR  IA   ARGL YLH++C   IIHCDIKP+NILL
Sbjct:   568 MPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLAYLHDECRDCIIHCDIKPENILL 627

Query:   656 DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLL 715
             D  +  +++DFGLAKL+  + S+ + T +RGT+GY+APEW     ITAK DVYS+G++L 
Sbjct:   628 DSQFCPKVADFGLAKLVGRDFSRVL-TTMRGTRGYLAPEWISGVAITAKADVYSYGMMLF 686

Query:   716 EIISCRKSFDIEMGEEYAILTDWAFDCYRNE-KLDDLVEGDMEA-LNDIKCVEKLVMVSI 773
             E++S R++ +    E+      WA      +  +  LV+  +E    DI+ V +   V+ 
Sbjct:   687 ELVSGRRNTEQSENEKVRFFPSWAATILTKDGDIRSLVDPRLEGDAVDIEEVTRACKVAC 746

Query:   774 WCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNP 805
             WCIQ++ S RP M +V+Q+LEGV+EV+ PP P
Sbjct:   747 WCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)]

 Score = 552 (199.4 bits), Expect = 6.1e-69, Sum P(4) = 6.1e-69
 Identities = 107/215 (49%), Positives = 146/215 (67%)

Query:   511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV 570
             F ++ELE+AT+NFK ++G G FG VYKG    T    T +AVKK+      G +EF  E+
Sbjct:   505 FEFEELEQATENFKMQIGSGGFGSVYKG----TLPDETLIAVKKITNHGLHGRQEFCTEI 560

Query:   571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQI 628
              +IG   H NLV+L GFC  G+  LLVYE++N+G+L   LF    P   W  R +IA   
Sbjct:   561 AIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGT 620

Query:   629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
             ARGL YLH  C  +IIHCD+KP+NILL D++  +ISDFGL+KLL   +S ++ T +RGT+
Sbjct:   621 ARGLAYLHSGCDQKIIHCDVKPENILLHDHFQPKISDFGLSKLLNQEES-SLFTTMRGTR 679

Query:   689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
             GY+APEW  N+ I+ K DVYS+G++LLE++S RK+
Sbjct:   680 GYLAPEWITNAAISEKADVYSYGMVLLELVSGRKN 714

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.5e-69, Sum P(2) = 8.5e-69
 Identities = 127/317 (40%), Positives = 186/317 (58%)

Query:   500 GDGTIETNLPCFSYKELEEATDNF-KE-EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
             G     + LP FS   +  AT++F KE E+GRG FG VYKGV+   R     +AVK+L  
Sbjct:   506 GKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGRE----IAVKRLSG 561

Query:   558 VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS 617
                 G  EFKNE+++I +  H+NLVRLLG C EG+ ++LVYE++ N +L  FLF   K +
Sbjct:   562 KSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQA 621

Query:   618 ---WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL 674
                W LR +I   IARGLLYLH D   +IIH D+K  N+LLD   N +ISDFG+A++   
Sbjct:   622 LIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGG 681

Query:   675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
             NQ++A    + GT GY++PE+      + K DVYSFGVLLLEI+S +++  +    E+  
Sbjct:   682 NQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRNTSLR-SSEHGS 740

Query:   735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
             L  +A+  Y + + ++LV+  +      +   + + V++ C+Q+  + RP M  VL MLE
Sbjct:   741 LIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLE 800

Query:   795 GVVEVSLPPNPYPFSSS 811
                     P    F+S+
Sbjct:   801 SDTATLAAPRQPTFTST 817

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 499 (180.7 bits), Expect = 2.4e-67, Sum P(2) = 2.4e-67
 Identities = 119/317 (37%), Positives = 181/317 (57%)

Query:   501 DGTIETNLPCFSYKELEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
             + T +  LP   ++E+  AT+NF    ++G+G FGIVYKG +L  +     +AVK+L + 
Sbjct:   504 NNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQE----MAVKRLSKT 559

Query:   559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG---NLK 615
                G  EFKNEV +I +  H NLVRLL  C +   ++L+YE+L N +L S LF    N K
Sbjct:   560 SVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSK 619

Query:   616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
              +W +R +I   IARGLLYLH+D   +IIH D+K  NILLD Y   +ISDFG+A++   +
Sbjct:   620 LNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMARIFGRD 679

Query:   676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR--KSF---DIEMGE 730
             +++A    + GT GY++PE+  +   + K DV+SFGVLLLEIIS +  K F   D ++  
Sbjct:   680 ETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNSDRDLNL 739

Query:   731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
                +  +W  +    E +D ++          + + + + + + C+QE    RPTM  V+
Sbjct:   740 LGCVWRNWK-EGKGLEIIDPIITDSSSTFRQHEIL-RCIQIGLLCVQERAEDRPTMSLVI 797

Query:   791 QMLEGVVEVSLPPNPYP 807
              ML G    ++P    P
Sbjct:   798 LML-GSESTTIPQPKAP 813

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 8.4e-65, Sum P(2) = 8.4e-65
 Identities = 125/323 (38%), Positives = 177/323 (54%)

Query:   490 YKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEE--VGRGSFGIVYKGVILTTRTST 547
             Y    I+   GD     +LP FS+  +  AT +F EE  +G+G FG VYKG     R   
Sbjct:   492 YSSSPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGRE-- 549

Query:   548 TAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA 607
               +AVK+L    + G +EFKNE+++I +  H+NLVRLLG C E   ++L+YE++ N +L 
Sbjct:   550 --IAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLD 607

Query:   608 SFLFGNLKPS---WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS 664
              FLF   K     W  R  +   IARGLLYLH D   +IIH D+K  NILLD   N +IS
Sbjct:   608 RFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKIS 667

Query:   665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
             DFG+A++    Q  A    + GT GY+APE+      + K DVYSFGVL+LEI+S RK+ 
Sbjct:   668 DFGMARIFNYRQDHANTIRVVGTYGYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNV 727

Query:   725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP 784
                 G ++  L  +A+  +   K  ++++  ++   D+    + + V + C Q+    RP
Sbjct:   728 SFR-GTDHGSLIGYAWHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRP 786

Query:   785 TMKKVLQMLEGVVEVSLPPNPYP 807
              M  VL MLE      LPP   P
Sbjct:   787 NMGSVLLMLESQTS-QLPPPRQP 808

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2197649 AT1G61360 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
 Identities = 115/307 (37%), Positives = 180/307 (58%)

Query:   506 TNLPCFSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE 563
             + L  F   +L+ AT+NF    ++G+G FG VYKG +   +     +AVK+L      G 
Sbjct:   481 SGLNFFEIHDLQTATNNFSVLNKLGQGGFGTVYKGKLQDGKE----IAVKRLTSSSVQGT 536

Query:   564 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG---NLKPSWNL 620
             +EF NE+ +I +  H+NL+RLLG C +G+ +LLVYE++ N +L  F+F     L+  W  
Sbjct:   537 EEFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLDIFIFDLKKKLEIDWAT 596

Query:   621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
             R NI   IARGLLYLH D   +++H D+K  NILLD+  N +ISDFGLA+L   NQ +  
Sbjct:   597 RFNIIQGIARGLLYLHRDSFLRVVHRDLKVSNILLDEKMNPKISDFGLARLFHGNQHQDS 656

Query:   681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 740
               ++ GT GY++PE+    T + K D+YSFGVL+LEII+ ++      G++   L  +A+
Sbjct:   657 TGSVVGTLGYMSPEYAWTGTFSEKSDIYSFGVLMLEIITGKEISSFSYGKDNKNLLSYAW 716

Query:   741 DCYRNEKLDDLVEGDMEALNDIKCVE--KLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             D +      +L++ D++  + +  VE  + V + + C+Q     RP +K+V+ ML    +
Sbjct:   717 DSWSENGGVNLLDQDLDDSDSVNSVEAGRCVHIGLLCVQHQAIDRPNIKQVMSMLTSTTD 776

Query:   799 VSLPPNP 805
             +  P  P
Sbjct:   777 LPKPTQP 783

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
 Identities = 118/308 (38%), Positives = 180/308 (58%)

Query:   508 LPCFSYKELEEATDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE 565
             LP   +K L  AT+NF  +  +G+G FGIVYKG++L  +     +AVK+L ++   G  E
Sbjct:   508 LPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKE----IAVKRLSKMSSQGTDE 563

Query:   566 FKNEVVVIGQTHHKNLVRLLGFC-DEGQNRLLVYEFLNNGTLASFLFGNLKPS---WNLR 621
             F NEV +I +  H NLVRLLG C D+G+ ++L+YE+L N +L S LF   + S   W  R
Sbjct:   564 FMNEVRLIAKLQHINLVRLLGCCVDKGE-KMLIYEYLENLSLDSHLFDQTRSSNLNWQKR 622

Query:   622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
              +I   IARGLLYLH+D   +IIH D+K  N+LLD     +ISDFG+A++    +++A  
Sbjct:   623 FDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREETEANT 682

Query:   682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 741
               + GT GY++PE+  +   + K DV+SFGVLLLEIIS +++           L  + + 
Sbjct:   683 RRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNRDLNLLGFVWR 742

Query:   742 CYRNEKLDDLVEG-DMEALN-DIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              ++  K  ++V+  +++AL+ +    E L  + + + C+QE    RP M  V+ ML    
Sbjct:   743 HWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMSSVMVMLGS-- 800

Query:   798 EVSLPPNP 805
             E +  P P
Sbjct:   801 ETTAIPQP 808

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2137010 AT4G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
 Identities = 214/774 (27%), Positives = 341/774 (44%)

Query:    69 FLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEID-- 126
             +LL I   N+     +  T  K       R S  K++ +  L+ ++     VWS+ ++  
Sbjct:    97 YLLKILDGNLILHDNISAT-RKSHTEGTSRRSPQKIS-EGNLLFHET----VWSTGVNSS 150

Query:   127 IGTVAVGHMNDTGNFVLAXXXXXXXXX---XXXNPSDTLLPGQTMETKQGLF-SRKSETN 182
             +       + D+GN VL                +PSDT LPG  +     LF S +S  +
Sbjct:   151 MSKDVQAVLFDSGNLVLRDGPNSSAAVLWQSFDHPSDTWLPGGKIRLGSQLFTSWESLID 210

Query:   183 FSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT-YDPANSSNSGYRVMFNESGYMY 241
              S GR+        + ++ + N        +Y+ SG  YD   S   G+  +   +   +
Sbjct:   211 PSPGRYSLEFDPKLHSLVTVWNRSK-----SYWSSGPLYDWLQSFK-GFPEL-QGTKLSF 263

Query:   242 ILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVN 301
              L  +       T SV P +   YR  +   G F    +  +  ++W V  S+P+N C +
Sbjct:   264 TLNMDESYI---TFSVDPQSR--YRLVMGVSGQFMLQVWHVD-LQSWRVILSQPDNRC-D 316

Query:   302 IGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLL------DENDRYGSCKPDFELSCWG 355
             +       +CG   IC+ ++   P C C  G+         D ND  G CK +  L C  
Sbjct:   317 V-----YNSCGSFGICN-ENREPPPCRCVPGFKREFSQGSDDSNDYSGGCKRETYLHC-- 368

Query:   356 GGQGYKK--ELFDFHELQL----TNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQDD 409
                 YK+  E      ++L    T   +  S  FR      C + C++DC C A     +
Sbjct:   369 ----YKRNDEFLPIENMKLATDPTTASVLTSGTFRT-----CASRCVADCSCQAYANDGN 419

Query:   410 CC--WFKKLPLSNGMTDGRLTSKAFMKYKNKGXXXXXXXXXXXXXXXXXXXMMNATGSVL 467
              C  W K    +    D       F++  +                      +    S++
Sbjct:   420 KCLVWTKDA-FNLQQLDANKGHTFFLRLASSNISTANNRKTEHSKGKSIVLPL-VLASLV 477

Query:   468 LGSSVFVNFALVCAFGLSFFFIYKK---KWIRNSPGDGTIET---NLPCFSYKELEEATD 521
               ++ FV   L C          K+   K  R     G I+    N+   +  ++  AT+
Sbjct:   478 ATAACFVG--LYCCISSRIRRKKKQRDEKHSRELLEGGLIDDAGENMCYLNLHDIMVATN 535

Query:   522 NF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
             +F  K+++G G FG VYKG +     +   VA+K+L +    G  EFKNEVV+I +  HK
Sbjct:   536 SFSRKKKLGEGGFGPVYKGKL----PNGMEVAIKRLSKKSSQGLTEFKNEVVLIIKLQHK 591

Query:   580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIARGLLYLH 636
             NLVRLLG+C EG  +LL+YE+++N +L   LF +LK     W  R  I     RGL YLH
Sbjct:   592 NLVRLLGYCVEGDEKLLIYEYMSNKSLDGLLFDSLKSRELDWETRMKIVNGTTRGLQYLH 651

Query:   637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
             E    +IIH D+K  NILLDD  N +ISDFG A++    Q       I GT GY++PE+ 
Sbjct:   652 EYSRLRIIHRDLKASNILLDDEMNPKISDFGTARIFGCKQIDDSTQRIVGTFGYMSPEYA 711

Query:   697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
                 I+ K D+YSFGVLLLEIIS +K+      ++   L  + ++ +   K   +++  M
Sbjct:   712 LGGVISEKSDIYSFGVLLLEIISGKKATRFVHNDQKHSLIAYEWESWCETKGVSIIDEPM 771

Query:   757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSS 810
                  ++   + + +++ C+Q+ P  RP + +++ ML     + +P  P  FS+
Sbjct:   772 CCSYSLEEAMRCIHIALLCVQDHPKDRPMISQIVYMLSNDNTLPIPKQP-TFSN 824

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39202	RLK1_ARATH	2, ., 7, ., 1, 1, ., 1	0.4803	0.9606	0.9387	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	813
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-51
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-51
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-49
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-47
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-47
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	8e-47
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-44
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-41
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-32
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-32
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-31
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-30
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-30
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-28
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	7e-28
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-27
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-27
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-27
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-27
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-26
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-26
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-25
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-25
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	7e-25
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	8e-25
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-24
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-24
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-24
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-24
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-24
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-24
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-24
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	9e-24
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-23
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	6e-23
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-23
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-22
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-22
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-22
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-22
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	6e-22
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	9e-22
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-21
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-21
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-21
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-21
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-21
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-21
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-21
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-21
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-21
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-21
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-21
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-21
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-20
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	1e-20
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-20
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-20
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-20
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-20
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-20
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-20
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-20
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	9e-20
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-19
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-19
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-19
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-19
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-19
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-19
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-19
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-19
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-19
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-19
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-19
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-19
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-19
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-19
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	9e-19
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-19
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-18
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-18
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-18
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-18
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-18
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-18
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-18
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-18
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-18
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-18
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-18
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-18
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-18
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	6e-18
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-18
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-18
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-18
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	8e-18
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-17
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-17
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-17
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-17
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-17
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-17
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	5e-17
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	6e-17
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	8e-17
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	9e-17
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-16
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-16
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-16
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-16
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-16
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-16
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-16
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-16
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-16
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-16
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-16
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-16
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-16
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-16
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-16
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-16
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-16
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	6e-16
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-16
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	6e-16
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	8e-16
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-15
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	1e-15
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-15
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-15
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-15
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-15
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-15
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-15
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-15
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-15
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-15
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-15
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-15
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-15
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-15
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-15
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-15
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-15
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-15
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-15
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-14
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-14
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-14
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-14
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-14
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-14
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-14
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-14
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-14
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-14
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-14
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	4e-14
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-14
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-14
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	5e-14
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	6e-14
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-14
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	8e-14
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-13
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-13
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-13
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-13
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	1e-13
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-13
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-13
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-13
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-13
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-13
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-13
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-13
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-13
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-13
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-13
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-13
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	5e-13
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-13
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-13
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-12
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-12
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-12
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-12
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-12
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-12
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-12
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-12
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	5e-12
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-12
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	7e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-12
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-11
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-11
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-11
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-11
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-11
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	2e-11
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-11
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-11
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	3e-11
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-11
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	4e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	5e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-11
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	5e-11
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-11
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-11
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-11
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	8e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	9e-11
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-10
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	2e-10
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-10
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-10
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-10
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-10
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-10
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-10
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	7e-10
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	8e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	9e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-09
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-09
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-09
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	3e-09
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-09
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-09
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-09
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	7e-09
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-08
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-08
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-08
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-08
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-08
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-08
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	9e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-07
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-07
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-06
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	2e-06
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-06
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	4e-06
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	6e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	7e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	4e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-04
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	2e-04
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	3e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	3e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	6e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	6e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	9e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.001
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.002
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.002
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.002
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.002
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.003
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  180 bits (460), Expect = 1e-51
 Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 41/282 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKN 580
              ++G GSFG VYK     T      VAVK L +  +  +K+   + E+ ++ +  H N
Sbjct: 3   LLRKLGSGSFGTVYKAKHKGTGKI---VAVKILKKRSEKSKKDQTARREIRILRRLSHPN 59

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +VRL+   ++  +  LV E+   G L  +L      S +    IA QI RGL YLH   S
Sbjct: 60  IVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLH---S 116

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW-FRNS 699
             IIH D+KP+NILLD+    +I+DFGLAK L  + S    T   GT  Y+APE     +
Sbjct: 117 NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSL--TTFVGTPWYMAPEVLLGGN 174

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFD----------IEMGEEYAILTDWAFDCYRNEKLD 749
               KVDV+S GV+L E+++ +  F           I       +  D       +E+  
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAK 234

Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           DL++                     C+ +DPS RPT +++LQ
Sbjct: 235 DLIK--------------------KCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  177 bits (450), Expect = 7e-51
 Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 60/271 (22%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG VY      T      VA+K + +       E    E+ ++ + +H N+V+L 
Sbjct: 1   LGEGGFGTVYLARDKKTGKK---VAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLY 57

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSAQII 644
           G  ++  +  LV E+   G+L   L  N    S +    I  QI  GL YLH   S  II
Sbjct: 58  GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGII 114

Query: 645 HCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-WFRNSTIT 702
           H D+KP+NILLD D    +++DFGL+KLLT    K++   I GT  Y+APE        +
Sbjct: 115 HRDLKPENILLDSDNGKVKLADFGLSKLLT--SDKSLLKTIVGTPAYMAPEVLLGKGYYS 172

Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
            K D++S GV+L E+                             +L DL+          
Sbjct: 173 EKSDIWSLGVILYEL----------------------------PELKDLIR--------- 195

Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                        +Q+DP  RP+ K++L+ L
Sbjct: 196 -----------KMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  172 bits (439), Expect = 8e-49
 Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 35/277 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
             E++G GSFG VY          T   VA+K + +     ++E    E+ ++ +  H N
Sbjct: 3   ILEKLGEGSFGKVYLAR----DKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPN 58

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +VRL    ++     LV E+   G L   L   G L            QI   L YLH  
Sbjct: 59  IVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDE--ARFYLRQILSALEYLH-- 114

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S  I+H D+KP+NILLD+  + +++DFGLA+   L+  + + T + GT  Y+APE    
Sbjct: 115 -SKGIVHRDLKPENILLDEDGHVKLADFGLARQ--LDPGEKLTTFV-GTPEYMAPEVLLG 170

Query: 699 STITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNE-KLDDLVEGD 755
                 VD++S GV+L E+++ +  F  D ++ E +  +          E  +       
Sbjct: 171 KGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISP----- 225

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
            EA + I+            + +DP  R T ++ LQ 
Sbjct: 226 -EAKDLIRK----------LLVKDPEKRLTAEEALQH 251

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  169 bits (431), Expect = 1e-47
 Identities = 88/279 (31%), Positives = 138/279 (49%), Gaps = 32/279 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKN 580
             +++G G+FG VYKG +          VAVK L +   +   +EF  E  ++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 638
           +V+LLG C E +   +V E++  G L S+L    +P  +L    + A QIARG+ YL   
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLE-- 119

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA---IRGTKGYVAPEW 695
            S   IH D+  +N L+ +    +ISDFGL++ L  +     R     IR    ++APE 
Sbjct: 120 -SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIR----WMAPES 174

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEG 754
            +    T+K DV+SFGVLL EI +        +GE+ Y  +++        E L+ L  G
Sbjct: 175 LKEGKFTSKSDVWSFGVLLWEIFT--------LGEQPYPGMSN-------EEVLEYLKNG 219

Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                    C  +L  + + C  EDP  RPT  +++++L
Sbjct: 220 YRLPQPP-NCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  167 bits (426), Expect = 5e-47
 Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 35/281 (12%)

Query: 523 FKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKN 580
             +++G G+FG VYKG            VAVK L +   +   +EF  E  ++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIARGLLYLHE 637
           +V+LLG C E +  ++V E++  G L  +L    +P   S +   + A QIARG+ YL  
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYL-RKNRPKELSLSDLLSFALQIARGMEYLE- 120

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA---IRGTKGYVAPE 694
             S   IH D+  +N L+ +    +ISDFGL++ L  +    ++     IR    ++APE
Sbjct: 121 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIR----WMAPE 174

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE 753
             +    T+K DV+SFGVLL EI +        +GEE Y  +++        E L+ L +
Sbjct: 175 SLKEGKFTSKSDVWSFGVLLWEIFT--------LGEEPYPGMSN-------AEVLEYLKK 219

Query: 754 GD-MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
           G  +    +  C  +L  + + C  EDP  RPT  +++++L
Sbjct: 220 GYRLPKPPN--CPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  167 bits (425), Expect = 8e-47
 Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 33/280 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKN 580
             +++G G+FG VYKG +      T T VAVK L     + E+ EF  E  ++ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHE 637
           +VRLLG C +G+   +V E++  G L  FL      L         +A QIA+G+ YL  
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKD--LLQMALQIAKGMEYLE- 119

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG---YVAPE 694
             S   +H D+  +N L+ +    +ISDFGL++ +             G K    ++APE
Sbjct: 120 --SKNFVHRDLAARNCLVTENLVVKISDFGLSRDI---YEDDYYRKRGGGKLPIKWMAPE 174

Query: 695 WFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
             ++   T+K DV+SFGVLL EI +   + +     EE   + +   D YR  + ++   
Sbjct: 175 SLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEE---VLELLEDGYRLPRPEN--- 228

Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                     C ++L  + + C   DP  RPT  ++++ L
Sbjct: 229 ----------CPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  160 bits (406), Expect = 3e-44
 Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 44/288 (15%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVR 583
           +++G G+FG VYKG +      TT VAVK L     + E K+F  E  V+ +  H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKP---SWNLRTNIAFQIARGLLY 634
           LLG C E +   LV E++  G L  +L      F + +    S     + A QIA+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA----IRGTKGY 690
           L    S + +H D+  +N L+ +    +ISDFGL++ +  +     +T     IR    +
Sbjct: 121 LA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR----W 173

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLD 749
           +APE  ++   T+K DV+SFGVLL EI +        +G   Y  L++        E L+
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFT--------LGATPYPGLSN-------EEVLE 218

Query: 750 DLVEGDMEALND-IKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            L +G    L     C ++L  +M+S W  Q DP  RPT  ++++ LE
Sbjct: 219 YLRKG--YRLPKPEYCPDELYELMLSCW--QLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  150 bits (381), Expect = 9e-41
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 28/273 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E +GRGSFG VY       + +   +AVK   L    ++  +  + E+ ++    H N+V
Sbjct: 6   ELLGRGSFGSVYLA---LDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV 62

Query: 583 RLLGFC-DEGQNRLLVY-EFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           R  G   DE +N L ++ E+++ G+L+S L  FG L     +R     QI  GL YLH  
Sbjct: 63  RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEP-VIR-KYTRQILEGLAYLH-- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S  I+H DIK  NIL+D     +++DFG AK L   ++     ++RGT  ++APE  R 
Sbjct: 119 -SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                  D++S G  ++E+ + +  +  E+G   A L         + +  ++ E   E 
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKPPWS-ELGNPMAALYKIGS----SGEPPEIPEHLSEE 232

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             D   + K       C++ DP  RPT  ++LQ
Sbjct: 233 AKDF--LRK-------CLRRDPKKRPTADELLQ 256

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  125 bits (316), Expect = 3e-32
 Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
               +G+G FG V  G     +     VAVK L        + F  E  V+    H NLV
Sbjct: 10  LGATIGKGEFGDVMLGDYRGQK-----VAVKCLKDD-STAAQAFLAEASVMTTLRHPNLV 63

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           +LLG   +G    +V E++  G+L  +L    +    L   +  A  +  G+ YL E   
Sbjct: 64  QLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-- 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              +H D+  +N+L+ +   A++SDFGLAK  +  Q    +  ++ T    APE  R   
Sbjct: 122 -NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG-KLPVKWT----APEALREKK 175

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG-----D 755
            + K DV+SFG+LL EI S  +                    Y    L D+V        
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRV------------------PYPRIPLKDVVPHVEKGYR 217

Query: 756 MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
           MEA     C  ++  VM   W +  DP+ RPT K++ + L 
Sbjct: 218 MEAPE--GCPPEVYKVMKDCWEL--DPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  125 bits (316), Expect = 3e-32
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 36/276 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKN 580
             + +GRG+FG+VYKG  L   T    VA+K++   ++ ++  K    E+ ++    H N
Sbjct: 4   LGDLIGRGAFGVVYKG--LNLETGDF-VAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +V+ +G  +   +  ++ E+  NG+L   +  FG      +L     +Q+ +GL YLHE 
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPF--PESLVAVYVYQVLQGLAYLHEQ 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               +IH DIK  NIL       +++DFG+A    LN       ++ GT  ++APE    
Sbjct: 119 ---GVIHRDIKAANILTTKDGVVKLADFGVA--TKLNDVSKDDASVVGTPYWMAPEVIEM 173

Query: 699 STITAKVDVYSFGVLLLEIISCRKS-FDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
           S  +   D++S G  ++E+++     +D+  M   + I+ D   D         L EG  
Sbjct: 174 SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD---DHPP------LPEGIS 224

Query: 757 EALND-IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             L D +            C Q+DP+LRPT K++L+
Sbjct: 225 PELKDFLMQ----------CFQKDPNLRPTAKQLLK 250

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  125 bits (314), Expect = 5e-31
 Identities = 81/292 (27%), Positives = 124/292 (42%), Gaps = 42/292 (14%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQ-TH 577
               ++G GSFG VY             VA+K L +  +   KE   F  E+ ++    H
Sbjct: 3   RILRKLGEGSFGEVYLAR------DRKLVALKVLAKKLESKSKEVERFLREIQILASLNH 56

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----FGNLKPSWNLRTNIAFQIARGL 632
             N+V+L  F  +  +  LV E+++ G+L   L      G L  S  L   I  QI   L
Sbjct: 57  PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALF--ILAQILSAL 114

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYN-ARISDFGLAKLLTLNQSKAI----RTAIRGT 687
            YLH      IIH DIKP+NILLD      ++ DFGLAKLL    S +      +   GT
Sbjct: 115 EYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGT 171

Query: 688 KGYVAPEWFRNST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-----YAILTDWA 739
            GY+APE     +    ++  D++S G+ L E+++    F+ E           I+ +  
Sbjct: 172 PGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP 231

Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                +       E   +A +D+  ++K        + +DP  R +    L 
Sbjct: 232 TPSLASPLSPSNPELISKAASDL--LKK-------LLAKDPKNRLSSSSDLS 274

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  121 bits (305), Expect = 1e-30
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHK 579
            +++G+GSFG VY    L  R S      +K++D +    EKE +   NEV ++ + +H 
Sbjct: 5   IKQIGKGSFGKVY----LVRRKSDGKLYVLKEID-LSNMSEKEREDALNEVKILKKLNHP 59

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL----FGNLKPSWNLRTNIAFQIARGLLYL 635
           N+++     +E     +V E+ + G L+  +                +   Q+   L YL
Sbjct: 60  NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S +I+H DIKPQNI L      ++ DFG++K+L+     A +T + GT  Y++PE 
Sbjct: 120 H---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA-KTVV-GTPYYLSPEL 174

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
            +N     K D++S G +L E+ + +  F+   GE    L               +++G 
Sbjct: 175 CQNKPYNYKSDIWSLGCVLYELCTLKHPFE---GENLLEL------------ALKILKGQ 219

Query: 756 MEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
              +       +  LV      +Q+DP  RP++ ++LQ 
Sbjct: 220 YPPIPSQYSSELRNLVS---SLLQKDPEERPSIAQILQS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  120 bits (303), Expect = 2e-30
 Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 16/197 (8%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
            E++G+G FG VYK      + +   VA+K +    ++ +++  NE+ ++ +  H N+V+
Sbjct: 5   LEKIGKGGFGEVYKA---RHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL----YLHEDC 639
             G   +     +V EF + G+L   L  +   +    + IA+ + + LL    YLH   
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKD-LLKSTNQTLTE-SQIAY-VCKELLKGLEYLH--- 115

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  IIH DIK  NILL      ++ DFGL+  L+  ++   R  + GT  ++APE     
Sbjct: 116 SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGK 172

Query: 700 TITAKVDVYSFGVLLLE 716
               K D++S G+  +E
Sbjct: 173 PYDYKADIWSLGITAIE 189

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  114 bits (286), Expect = 6e-28
 Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 36/231 (15%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKL-DRVFQDGEKEFKNEVV 571
           E+  +   F EE+G G+FG VYKG +     R S T+VA+K L +      ++EF+ E  
Sbjct: 1   EIPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAE 60

Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN------------------ 613
           ++    H N+V LLG C + Q   +++E+L +G L  FL  N                  
Sbjct: 61  LMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSS 120

Query: 614 LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT 673
           L  S  L  +IA QIA G+ YL    S   +H D+  +N L+ +    +ISDFGL++ + 
Sbjct: 121 LDCSDFL--HIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIY 175

Query: 674 LN-----QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
                  QSK++   +R    ++ PE       T + D++SFGV+L EI S
Sbjct: 176 SADYYRVQSKSL-LPVR----WMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score =  120 bits (303), Expect = 7e-28
 Identities = 95/346 (27%), Positives = 154/346 (44%), Gaps = 38/346 (10%)

Query: 470 SSVFVNFALVCAFGLSFFFIYKKKWI---RNSPGDGTIETNLPCFSYKELEEATDN---- 522
           +     F ++      F FI  +  +   R    DGT E     F  K  +  T N    
Sbjct: 633 TCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQF--FDSKVSKSITINDILS 690

Query: 523 -FKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
             KEE  + RG  G  YKG  +          +  ++ +         +E+  +G+  H 
Sbjct: 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPS-------SEIADMGKLQHP 743

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           N+V+L+G C   +   L++E++    L+  L      SW  R  IA  IA+ L +LH  C
Sbjct: 744 NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  ++  ++ P+ I++D      +    L  LL  +    I +A      YVAPE     
Sbjct: 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA------YVAPETRETK 853

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL----DDLVEGD 755
            IT K D+Y FG++L+E+++ +   D E G   +I+ +WA  CY +  L    D  + GD
Sbjct: 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIV-EWARYCYSDCHLDMWIDPSIRGD 912

Query: 756 MEALNDIKCVEKLVM-VSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           + ++N  + VE  VM +++ C   DP+ RP    VL+ LE     S
Sbjct: 913 V-SVNQNEIVE--VMNLALHCTATDPTARPCANDVLKTLESASRSS 955

Length = 968

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  113 bits (284), Expect = 1e-27
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 26/216 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGE----KEFKNEVVVIGQTH 577
           F +++G G FG V          +T   VAVK L+     GE     +F+ E+ ++    
Sbjct: 8   FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNH---SGEEQHRSDFEREIEILRTLD 64

Query: 578 HKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLL 633
           H+N+V+  G C++  G++  L+ E+L +G+L  +L  + +   NL+  +  + QI +G+ 
Sbjct: 65  HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMD 123

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ----SKAIR-TAIRGTK 688
           YL    S + IH D+  +NIL++     +ISDFGLAK+L  ++     K    + I    
Sbjct: 124 YLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF--- 177

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
            + APE  R S  ++  DV+SFGV L E+ +    S
Sbjct: 178 -WYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  112 bits (283), Expect = 1e-27
 Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 43/288 (14%)

Query: 526 EVGRGSFGIVYKGVILTTRTST--TAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G+          T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 13  ELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVV 72

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL--------FGNLK--PSWNLRTNIAFQIARGL 632
           RLLG    GQ  L+V E +  G L S+L               P+      +A +IA G+
Sbjct: 73  RLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM 132

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL      + +H D+  +N ++ +    +I DFG+ +   + ++   R   +G KG   
Sbjct: 133 AYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRD--IYETDYYR---KGGKGLLP 184

Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T K DV+SFGV+L E+               A L +  +    NE+
Sbjct: 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEM---------------ATLAEQPYQGLSNEE 229

Query: 748 LDDLVEGDMEALN-DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           +   V  D   L+    C +KL+ +   C Q +P +RPT  +++  L+
Sbjct: 230 VLKFV-IDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  112 bits (282), Expect = 2e-27
 Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 34/228 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ-THH 578
           F + +G GSF  V        + +    A+K LD+     +   K  K E  V+ +   H
Sbjct: 5   FGKIIGEGSFSTVVLA---KEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH 61

Query: 579 KNLVRLLG-FCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYL 635
             +++L   F DE +N   V E+  NG L  ++  +G+L          A +I   L YL
Sbjct: 62  PGIIKLYYTFQDE-ENLYFVLEYAPNGELLQYIRKYGSL--DEKCTRFYAAEILLALEYL 118

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ--------SKAIRTAIR-- 685
           H   S  IIH D+KP+NILLD   + +I+DFG AK+L  N         +  I + I   
Sbjct: 119 H---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKN 175

Query: 686 --------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
                   GT  YV+PE           D+++ G ++ ++++ +  F 
Sbjct: 176 RRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR 223

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  111 bits (279), Expect = 3e-27
 Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 10/199 (5%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KGV L        VAVK L       G+KEF  E  V+ Q  H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           L+G C +G+  +LV E    G L  +L    + P  +L   +A Q+A G+ YL       
Sbjct: 61  LIGVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDL-KELAHQVAMGMAYLES---KH 115

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTAIRGTKGYVAPEWFRNST 700
            +H D+  +N+LL + + A+ISDFG+++ L       +A  TA R    + APE      
Sbjct: 116 FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA-TTAGRWPLKWYAPECINYGK 174

Query: 701 ITAKVDVYSFGVLLLEIIS 719
            ++K DV+S+GV L E  S
Sbjct: 175 FSSKSDVWSYGVTLWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  110 bits (277), Expect = 6e-27
 Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 32/271 (11%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLG 586
           G+GS G+VYK      + +    A+KK+      +  K+   E+  +       +V+  G
Sbjct: 10  GQGSSGVVYKVR---HKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Query: 587 -FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
            F  EG+  + V E+++ G+LA  L    K    +   IA QI +GL YLH      IIH
Sbjct: 67  AFYKEGEISI-VLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTK--RHIIH 123

Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKV 705
            DIKP N+L++     +I+DFG++K   L  +        GT  Y++PE  +  + +   
Sbjct: 124 RDIKPSNLLINSKGEVKIADFGISK--VLENTLDQCNTFVGTVTYMSPERIQGESYSYAA 181

Query: 706 DVYSFGVLLLEIISCRKSFDIEMGEEYAIL----TDWAFDCYRNEKLDDLVEGDMEALND 761
           D++S G+ LLE           +G ++  L      +       E +  + +G   +L  
Sbjct: 182 DIWSLGLTLLECA---------LG-KFPFLPPGQPSFF------ELMQAICDGPPPSLPA 225

Query: 762 IKCVEKLV-MVSIWCIQEDPSLRPTMKKVLQ 791
            +   +    +S  C+Q+DP  RP+  ++LQ
Sbjct: 226 EEFSPEFRDFISA-CLQKDPKKRPSAAELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  108 bits (273), Expect = 2e-26
 Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 36/277 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHHKNLV 582
           +G G+FG VY  V L T      +AVK++    QD +    KE  +E+ V+    H NLV
Sbjct: 8   IGGGTFGKVYTAVNLDT---GELMAVKEIR--IQDNDPKTIKEIADEMKVLELLKHPNLV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           +  G     +   +  E+ + GTL   L  G +     +R     Q+  GL YLH   S 
Sbjct: 63  KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRV-YTLQLLEGLAYLH---SH 118

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI---RGTKGYVAPEWFRN 698
            I+H DIKP NI LD     ++ DFG A  L  N +  +   +    GT  Y+APE    
Sbjct: 119 GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK-NNTTTMGEEVQSLAGTPAYMAPEVITG 177

Query: 699 STITAK---VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
                     D++S G ++LE+ + ++ +  E+  E+ I+                  G 
Sbjct: 178 GKGKGHGRAADIWSLGCVVLEMATGKRPWS-ELDNEFQIMFHVGA-------------GH 223

Query: 756 MEALNDIKCVEKLVMVSI-WCIQEDPSLRPTMKKVLQ 791
              + D   +       +  C++ DP  RPT  ++LQ
Sbjct: 224 KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  108 bits (272), Expect = 4e-26
 Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 22/204 (10%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
              E++G G+ G VYK    T R +   VA+KK+ R+ +  ++   NE++++    H N+
Sbjct: 22  KNLEKIGEGASGEVYKA---TDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNI 77

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTN---IAF---QIARGLLY 634
           V          + L +V E+++ G+L   +  N      +R N   IA+   ++ +GL Y
Sbjct: 78  VDYYD-SYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQGLEY 131

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  +IH DIK  NILL    + +++DFG A  LT  +SK  R ++ GT  ++APE
Sbjct: 132 LH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK--RNSVVGTPYWMAPE 186

Query: 695 WFRNSTITAKVDVYSFGVLLLEII 718
             +      KVD++S G++ +E+ 
Sbjct: 187 VIKRKDYGPKVDIWSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  106 bits (266), Expect = 1e-25
 Identities = 70/203 (34%), Positives = 100/203 (49%), Gaps = 21/203 (10%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + ++G G FG V+ G    T   TT VAVK L       E  F  E  ++ +  H  LV+
Sbjct: 11  ERKLGAGQFGEVWMG----TWNGTTKVAVKTLKPGTMSPE-AFLQEAQIMKKLRHDKLVQ 65

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDC 639
           L   C E +   +V E+++ G+L  FL         LR      +A QIA G+ YL    
Sbjct: 66  LYAVCSEEEPIYIVTEYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLE--- 120

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
           S   IH D+  +NIL+ +    +I+DFGLA+L+  +      TA  G K    + APE  
Sbjct: 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD----EYTAREGAKFPIKWTAPEAA 176

Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
                T K DV+SFG+LL EI++
Sbjct: 177 NYGRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  106 bits (265), Expect = 2e-25
 Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 39/289 (13%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVV 572
           E+E      K ++G G +G VY+GV    + S T VAVK L    +D    +EF  E  V
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGV--WKKYSLT-VAVKTLK---EDTMEVEEFLKEAAV 55

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIAR 630
           + +  H NLV+LLG C       ++ EF+  G L  +L    +   N      +A QI+ 
Sbjct: 56  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 115

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-- 688
            + YL        IH D+  +N L+ + +  +++DFGL++L+T        TA  G K  
Sbjct: 116 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT----GDTYTAHAGAKFP 168

Query: 689 -GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRKSFDIEMGEEYAILTDWAFDCYRN 745
             + APE    +  + K DV++FGVLL EI +        I++ + Y +L       YR 
Sbjct: 169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KGYRM 224

Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E+     EG         C  K+  +   C Q +PS RP+  ++ Q  E
Sbjct: 225 ER----PEG---------CPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  104 bits (261), Expect = 7e-25
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E++  +     ++G G FG V++G+      +TT VAVK L     D  K+F  E  ++ 
Sbjct: 2   EIDRTSIQLLRKLGAGQFGEVWEGLW----NNTTPVAVKTLKPGTMD-PKDFLAEAQIMK 56

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGL 632
           +  H  L++L   C   +   +V E +  G+L  +L G    +  L    ++A Q+A G+
Sbjct: 57  KLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL    +   IH D+  +N+L+ +    +++DFGLA+++  +  +A R   +    + A
Sbjct: 117 AYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA-REGAKFPIKWTA 172

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE    +  + K DV+SFG+LL EI++
Sbjct: 173 PEAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  104 bits (262), Expect = 8e-25
 Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 28/266 (10%)

Query: 528 GRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           G G+FG VYKGV I         VA+K L +       KE  +E  V+    H ++VRLL
Sbjct: 16  GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLL 75

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           G C       L+ + +  G L  ++     N+   + L  N   QIA+G+ YL E    +
Sbjct: 76  GIC-LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLL--NWCVQIAKGMSYLEE---KR 129

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           ++H D+  +N+L+    + +I+DFGLAKLL +++ +      +    ++A E   +   T
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYT 189

Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE-GDMEALND 761
            K DV+S+GV + E+++         G +        ++     ++ DL+E G+      
Sbjct: 190 HKSDVWSYGVTVWELMT--------FGAK-------PYEGIPAVEIPDLLEKGERLPQPP 234

Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMK 787
           I C   + MV + C   D   RPT K
Sbjct: 235 I-CTIDVYMVLVKCWMIDAESRPTFK 259

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  104 bits (260), Expect = 1e-24
 Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 21/202 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
            ++G G FG V++G+          VA+K L       +++F+ EV  + +  HK+L+ L
Sbjct: 12  RKLGSGYFGEVWEGLWKNRVR----VAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
              C  G+   ++ E +  G+L +FL    G + P  +L  ++A Q+A G+ YL E    
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASL-IDMACQVAEGMAYLEEQ--- 123

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLT----LNQSKAIRTAIRGTKGYVAPEWFR 697
             IH D+  +NIL+ +    +++DFGLA+L+     L+  K I    + T    APE   
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWT----APEAAS 177

Query: 698 NSTITAKVDVYSFGVLLLEIIS 719
           + T + K DV+SFG+LL E+ +
Sbjct: 178 HGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score =  104 bits (260), Expect = 1e-24
 Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHH 578
               E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+     
Sbjct: 9   TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQI 628
            ++VRLLG   +GQ  L+V E + +G L S+L           G   P+      +A +I
Sbjct: 69  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
           A G+ YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G K
Sbjct: 129 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGK 180

Query: 689 G-----YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
           G     ++APE  ++   T   D++SFGV+L EI S               L +  +   
Sbjct: 181 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGL 225

Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
            NE++   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 226 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  102 bits (257), Expect = 3e-24
 Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 30/277 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           + +G G FG V +G +         VA+K L     D ++ +F  E  ++GQ  H N++R
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           L G   + +  +++ E++ NG+L  FL  N  K +      +   IA G+ YL E     
Sbjct: 70  LEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY-- 127

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS----KAIRTAIRGTKGYVAPEWFRN 698
            +H D+  +NIL++     ++SDFGL++ L  +++    K  +  IR T    APE    
Sbjct: 128 -VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWT----APEAIAY 182

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDME 757
              T+  DV+SFG+++ E++S         GE  Y    D +     N+ +   VE    
Sbjct: 183 RKFTSASDVWSFGIVMWEVMS--------YGERPYW---DMS-----NQDVIKAVEDGYR 226

Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
               + C   L  + + C Q+D + RPT  +++  L+
Sbjct: 227 LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  101 bits (253), Expect = 7e-24
 Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 43/281 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHK 579
           F +E+G G FG+V+ G           VA+K +    ++G   E +F  E  V+ +  H 
Sbjct: 8   FLKELGSGQFGVVHLGKWRGKID----VAIKMI----REGAMSEDDFIEEAKVMMKLSHP 59

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLH 636
           NLV+L G C + +   +V E++ NG L ++L    G L   W L  ++   +   + YL 
Sbjct: 60  NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLL--DMCSDVCEAMEYLE 117

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAP 693
            +     IH D+  +N L+ +    ++SDFGLA+ +  +Q     T+ +GTK    +  P
Sbjct: 118 SNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY----TSSQGTKFPVKWAPP 170

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-EKLDDLV 752
           E F  S  ++K DV+SFGVL+ E+ S  K                 ++ + N E ++ + 
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKM---------------PYERFSNSEVVESVS 215

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
            G            ++  +   C  E P  RP  KK+L  L
Sbjct: 216 AG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  101 bits (253), Expect = 7e-24
 Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 60/291 (20%)

Query: 522 NFK--EEVGRGSFGIVYKGVILTTRTSTTAV-AVKKLD-RVFQDGEKEFK-NEVVVIGQT 576
           +FK  +++G+GS+G VYK      R S     A+K++D       E+E   NE+ ++   
Sbjct: 1   DFKVLKKLGKGSYGSVYK----VKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV 56

Query: 577 HHKNLVR-----LLGFCDEGQNRL-LVYEFLNNGTLASFL-----FGNLKPS---WNLRT 622
           +H N++      L G      N+L +V E+   G L+  +        L P    W    
Sbjct: 57  NHPNIISYKEAFLDG------NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWR--- 107

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
            I  Q+ RGL  LHE    +I+H D+K  NILL      +I D G++K+L        +T
Sbjct: 108 -IFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLK---KNMAKT 160

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 740
            I GT  Y+APE ++    + K D++S G LL E+ +    F+    ++  Y +     +
Sbjct: 161 QI-GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-KY 218

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                    DL              +  +      +Q  P LRP   K+L 
Sbjct: 219 PPIPPIYSQDL--------------QNFIR---SMLQVKPKLRPNCDKILA 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  102 bits (255), Expect = 7e-24
 Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 54/299 (18%)

Query: 527 VGRGSFGIVYKG--VILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVV------VIGQT 576
           +G G+FG V K   V L     T+ VAVK L  D      EK+  + V       +IG+ 
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGK- 74

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------------FGNLKPSWNLR--- 621
            HKN++ LLG C +     +V E+  +G L  FL                 P   L    
Sbjct: 75  -HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD 133

Query: 622 -TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
             + A+Q+ARG+ +L    S + IH D+  +N+L+ + +  +I+DFGLA+ +        
Sbjct: 134 LVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK 190

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 738
            T  R    ++APE   +   T + DV+SFGVLL EI +   S    I + E + +L + 
Sbjct: 191 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG 250

Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
               YR EK                C ++L  +   C  E PS RPT K++++ L+ ++
Sbjct: 251 ----YRMEK-------------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  101 bits (252), Expect = 8e-24
 Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 33/276 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             +E+G G FG+V+ G  L  R     VA+K +       E++F  E  V+ +  H  LV
Sbjct: 8   LVQEIGSGQFGLVWLGYWLEKRK----VAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L G C E     LV+EF+ +G L+ +L    +  ++  T   +   +  G+ YL     
Sbjct: 63  QLYGVCTERSPICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSN- 120

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWFR 697
             +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F 
Sbjct: 121 --VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY----TSSTGTKFPVKWSSPEVFS 174

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
            S  ++K DV+SFGVL+ E+ S  K+                ++   N ++ + +     
Sbjct: 175 FSKYSSKSDVWSFGVLMWEVFSEGKT---------------PYENRSNSEVVETINAGFR 219

Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                   + +  +   C +E P  RP+   +L  L
Sbjct: 220 LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score =  101 bits (252), Expect = 9e-24
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 39/275 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E +G G FG V +G     +     VAVK  K D   Q     F  E  V+ + HHKNLV
Sbjct: 12  EIIGEGEFGAVLQGEYTGQK-----VAVKNIKCDVTAQ----AFLEETAVMTKLHHKNLV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCS 640
           RLLG         +V E ++ G L +FL    +   ++   + F   +A G+ YL    S
Sbjct: 63  RLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---S 118

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +++H D+  +NIL+ +   A++SDFGLA++     S  +  +    K + APE  ++  
Sbjct: 119 KKLVHRDLAARNILVSEDGVAKVSDFGLARV----GSMGVDNSKLPVK-WTAPEALKHKK 173

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG-DMEAL 759
            ++K DV+S+GVLL E+ S  ++        Y  ++         E  + + +G  ME  
Sbjct: 174 FSSKSDVWSYGVLLWEVFSYGRA-------PYPKMS-------LKEVKECVEKGYRMEPP 219

Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                   ++M S W  + +P  RP+  K+ + LE
Sbjct: 220 EGCPADVYVLMTSCW--ETEPKKRPSFHKLREKLE 252

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 99.4 bits (248), Expect = 5e-23
 Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 47/289 (16%)

Query: 527 VGRGSFGIVYKGVILTTRTSTT--AVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVR 583
           +G G+FG VY+G+            VAVK L     +  E +F  E +++ + +H+N+VR
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN----LKPSWNLRT----NIAFQIARGLLYL 635
           L+G   E   R ++ E +  G L SFL  N     +PS +L        A  +A+G  YL
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPS-SLTMKDLLFCARDVAKGCKYL 132

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNAR---ISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            E      IH DI  +N LL      R   I+DFG+A+   + ++   R   +G +    
Sbjct: 133 EE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR--DIYRASYYR---KGGRAMLP 184

Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++ PE F +   T+K DV+SFGVLL EI S               L    +    N++
Sbjct: 185 IKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS---------------LGYMPYPGRTNQE 229

Query: 748 LDDLVE--GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           + + V   G ++           +M   W  Q  P  RP    +L+ ++
Sbjct: 230 VMEFVTGGGRLDPPKGCPGPVYRIMTDCW--QHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 99.3 bits (247), Expect = 6e-23
 Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 43/288 (14%)

Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G+   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 13  ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L++ E +  G L S+L               PS      +A +IA G+
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 133 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 184

Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE+
Sbjct: 185 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGMSNEQ 229

Query: 748 -LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            L  ++EG +    D  C + L  +   C Q +P +RP+  +++  ++
Sbjct: 230 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 98.9 bits (247), Expect = 6e-23
 Identities = 77/283 (27%), Positives = 119/283 (42%), Gaps = 41/283 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAV-KKLD-RVFQDGEKE-FKNEVVVIGQTHHKNL 581
           E +G+GSFG V K V    R S   + V K++D     + EK+   +EV ++ +  H N+
Sbjct: 6   ETIGKGSFGTVRK-VR---RKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 582 VRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRT--------NIAFQIARG 631
           VR      D     L +V E+   G LA  +    +     R          I  Q+   
Sbjct: 62  VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLI----QKCKKERKYIEEEFIWRILTQLLLA 117

Query: 632 LLYLH--EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           L   H   D    ++H D+KP NI LD   N ++ DFGLAK+L  + S A      GT  
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA--KTYVGTPY 175

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           Y++PE   + +   K D++S G L+ E+ +    F          L        +  K  
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT---ARNQLQLASKI----KEGKFR 228

Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
            +       LN        V+ S   +  DP  RP+ +++LQ+
Sbjct: 229 RIPYRYSSELN-------EVIKS--MLNVDPDKRPSTEELLQL 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 98.5 bits (245), Expect = 1e-22
 Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 30/270 (11%)

Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G FG V+KG+ I    +    VA+K + DR  +   +E  + ++ +G   H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C  G +  LV +    G+L   +     +L P      N   QIA+G+ YL E    
Sbjct: 75  LGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDP--QRLLNWCVQIAKGMYYLEEHR-- 129

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            ++H ++  +NILL      +I+DFG+A LL  +  K   +  +    ++A E       
Sbjct: 130 -MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRY 188

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE-GDMEALN 760
           T + DV+S+GV + E++S          E YA +        R  ++ DL+E G+  A  
Sbjct: 189 THQSDVWSYGVTVWEMMSYG-------AEPYAGM--------RPHEVPDLLEKGERLAQP 233

Query: 761 DIKCVE-KLVMVSIWCIQEDPSLRPTMKKV 789
            I  ++  +VMV  W I E+  +RPT K++
Sbjct: 234 QICTIDVYMVMVKCWMIDEN--VRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 97.6 bits (243), Expect = 2e-22
 Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 32/286 (11%)

Query: 515 ELEEATDNFKEEV--GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 572
           E E   D   E V  G+G++GIVY    L+T+     +A+K++        +    E+ +
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVR---IAIKEIPERDSRYVQPLHEEIAL 58

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIA 629
                H+N+V+ LG   E     +  E +  G+L++ L     P  +    I F   QI 
Sbjct: 59  HSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQIL 118

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLT-LNQSKAIRTAIRGT 687
            GL YLH++   QI+H DIK  N+L++ Y    +ISDFG +K L  +N      T   GT
Sbjct: 119 EGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GT 172

Query: 688 KGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 745
             Y+APE          A  D++S G  ++E+ + +  F IE+GE  A +          
Sbjct: 173 LQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF-IELGEPQAAMFKVGMFKIHP 231

Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           E  + L     EA N I            C + DP  R +   +LQ
Sbjct: 232 EIPESLSA---EAKNFILR----------CFEPDPDKRASAHDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 97.1 bits (242), Expect = 2e-22
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 23/204 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+G+FG VYKGV+       T VAVK     +  D +++F  E  ++ Q  H N+V+
Sbjct: 1   EKIGKGNFGDVYKGVL----KGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVK 56

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI----ARGLLYLHEDC 639
           L+G C + Q   +V E +  G+L +FL    K    L      Q+    A G+ YL    
Sbjct: 57  LIGVCVQKQPIYIVMELVPGGSLLTFL---RKKKNRLTVKKLLQMSLDAAAGMEYLESKN 113

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK----GYVAPEW 695
               IH D+  +N L+ +    +ISDFG+++     +   I T   G K     + APE 
Sbjct: 114 C---IHRDLAARNCLVGENNVLKISDFGMSR----EEEGGIYTVSDGLKQIPIKWTAPEA 166

Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                 T++ DV+S+G+LL E  S
Sbjct: 167 LNYGRYTSESDVWSYGILLWETFS 190

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 97.3 bits (243), Expect = 2e-22
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 20/200 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQTHHKNL 581
           E +G+GSFG VYK +    + +   VA+K +D   ++ E E    + E+  + Q     +
Sbjct: 7   ECIGKGSFGEVYKAID---KRTNQVVAIKVID--LEEAEDEIEDIQQEIQFLSQCRSPYI 61

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHED 638
            +  G   +G    ++ E+   G+    L    KP     T IAF   ++  GL YLHE+
Sbjct: 62  TKYYGSFLKGSKLWIIMEYCGGGSCLDLL----KPGKLDETYIAFILREVLLGLEYLHEE 117

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
                IH DIK  NILL +  + +++DFG++  LT   SK  R    GT  ++APE  + 
Sbjct: 118 ---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK--RNTFVGTPFWMAPEVIKQ 172

Query: 699 STITAKVDVYSFGVLLLEII 718
           S    K D++S G+  +E+ 
Sbjct: 173 SGYDEKADIWSLGITAIELA 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 96.0 bits (239), Expect = 4e-22
 Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 14/209 (6%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAV-AVKKLDRVFQDG--EKEFKNEVVVIGQTHHKN 580
             ++G+GSFG+V+K V    R +   V A+K++D    +    +E  +E  V+ +     
Sbjct: 5   LNKIGKGSFGVVFKVV----RKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHED 638
           ++R      +     +V E+  NG L   L          +       QI  GL +LH  
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH-- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S +I+H DIK  N+ LD Y N +I D G+AKLL+ N + A  T I GT  Y++PE   +
Sbjct: 119 -SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA-NT-IVGTPYYLSPELCED 175

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIE 727
                K DV++ GV+L E  + +  FD  
Sbjct: 176 KPYNEKSDVWALGVVLYECCTGKHPFDAN 204

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 96.0 bits (239), Expect = 6e-22
 Identities = 60/206 (29%), Positives = 110/206 (53%), Gaps = 24/206 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLL 585
           +G+G FG VY G ++ +       AVK L+R+    E ++F  E +++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 586 GFC--DEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF--QIARGLLYLHEDC 639
           G C   EG   L+V  ++ +G L +F+      + N  ++  I F  Q+A+G+ YL    
Sbjct: 63  GICLPSEGSP-LVVLPYMKHGDLRNFI---RSETHNPTVKDLIGFGLQVAKGMEYL---A 115

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAK------LLTLNQSKAIRTAIRGTKGYVAP 693
           S + +H D+  +N +LD+ +  +++DFGLA+        +++     +  ++    ++A 
Sbjct: 116 SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVK----WMAL 171

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIIS 719
           E  +    T K DV+SFGVLL E+++
Sbjct: 172 ESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 95.7 bits (238), Expect = 9e-22
 Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 37/286 (12%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLV 582
           +E +G G FG V +G +         VA+K L   + + + ++F +E  ++GQ  H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLH 636
            L G   + +  +++ EF+ NG L SFL      F  ++    LR      IA G+ YL 
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRG-----IAAGMKYLS 123

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAP 693
           E      +H D+  +NIL++     ++SDFGL++ L  + S    T+  G K    + AP
Sbjct: 124 E---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP 180

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           E       T+  DV+S+G+++ E++S   R  +D+                  N+ + + 
Sbjct: 181 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----------------NQDVINA 223

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
           +E D      + C   L  + + C Q+D + RP   +++  L+ ++
Sbjct: 224 IEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 95.3 bits (237), Expect = 1e-21
 Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 25/214 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKE-------FKNEVVVIGQTH 577
           +G GSFG VY G+     +S   +AVK+  L  V    +            E+ ++ +  
Sbjct: 8   IGSGSFGSVYLGM---NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64

Query: 578 HKNLVRLLGFCDEGQNRLLVY-EFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 634
           H+N+V+ LG      + L ++ E++  G++A+ L  +G  + +  L  N   QI +GL Y
Sbjct: 65  HENIVQYLG-SSLDADHLNIFLEYVPGGSVAALLNNYGAFEET--LVRNFVRQILKGLNY 121

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----QSKAIRTAIRGTKGY 690
           LH   +  IIH DIK  NIL+D+    +ISDFG++K L  N    ++   R +++G+  +
Sbjct: 122 LH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           +APE  + ++ T K D++S G L++E+++ +  F
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPF 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 94.5 bits (236), Expect = 1e-21
 Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 28/241 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEF-KNEVVVIGQTHHKNLVR 583
           +G+GSFG V       T       A+K L   ++ +  E E    E  ++ + +H  +V+
Sbjct: 1   LGKGSFGKVLLVRKKDTGK---LYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK 57

Query: 584 LL-GFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF---QIARGLLYLH 636
           L   F  E   +L LV E+   G L S L   G             F   +I   L YLH
Sbjct: 58  LHYAFQTE--EKLYLVLEYAPGGELFSHLSKEGRFSEER-----ARFYAAEIVLALEYLH 110

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              S  II+ D+KP+NILLD   + +++DFGLAK L+   S+       GT  Y+APE  
Sbjct: 111 ---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRT--NTFCGTPEYLAPEVL 165

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYA-ILT-DWAFDCYRNEKLDDLVE 753
                   VD +S GVLL E+++ +  F  E   E Y  IL     F  + + +  DL+ 
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLIS 225

Query: 754 G 754
           G
Sbjct: 226 G 226

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 94.3 bits (234), Expect = 2e-21
 Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 14/200 (7%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV----VIGQTHHKNL 581
           E+G G+FG V KG+    ++  T VAVK L     + +   K+E++    V+ Q  +  +
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKT-VAVKILKN--DNNDPALKDELLREANVMQQLDNPYI 58

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR++G C E ++ +LV E    G L  FL  N   +    T +  Q++ G+ YL E    
Sbjct: 59  VRMIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET--- 114

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTAIRGTKGYVAPEWFRNS 699
             +H D+  +N+LL   + A+ISDFGL+K L  +++  KA        K Y APE     
Sbjct: 115 NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWY-APECMNYY 173

Query: 700 TITAKVDVYSFGVLLLEIIS 719
             ++K DV+SFGVL+ E  S
Sbjct: 174 KFSSKSDVWSFGVLMWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 94.5 bits (235), Expect = 2e-21
 Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 16/207 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQTHHKNLVR 583
           VGRG+FGIV+    L  R +   + + K   V Q  + E    +NE  V+    H N++ 
Sbjct: 8   VGRGAFGIVH----LCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE 63

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSA 641
                 E +  ++V E+   GTLA ++        +  T + F  QI   LL LH   + 
Sbjct: 64  YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQI---LLALHHVHTK 120

Query: 642 QIIHCDIKPQNILLDDYYN-ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            I+H D+K QNILLD +    +I DFG++K+L+   SK+    + GT  Y++PE      
Sbjct: 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILS---SKSKAYTVVGTPCYISPELCEGKP 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIE 727
              K D+++ G +L E+ S +++F+  
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAFEAA 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 93.5 bits (232), Expect = 3e-21
 Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 33/276 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E +GRG+FG V+ G +   R   T VAVK   + +  D + +F  E  ++ Q  H N+VR
Sbjct: 1   ERIGRGNFGEVFSGRL---RADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 57

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSA 641
           L+G C + Q   +V E +  G   +FL     P   ++  I      A G+ YL      
Sbjct: 58  LIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKHC- 115

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK----GYVAPEWFR 697
             IH D+  +N L+ +    +ISDFG+++     +   +  +  G K     + APE   
Sbjct: 116 --IHRDLAARNCLVTEKNVLKISDFGMSR----EEEDGVYASTGGMKQIPVKWTAPEALN 169

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
               +++ DV+SFG+LL E  S            YA L+        N++  + +E  + 
Sbjct: 170 YGRYSSESDVWSFGILLWEAFSLGAV-------PYANLS--------NQQTREAIEQGVR 214

Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                 C + +  +   C + DP  RP+   V Q L
Sbjct: 215 LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 93.6 bits (233), Expect = 3e-21
 Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 46/281 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-----KEFKNEVVVIGQTHHK 579
           E +G GSFG VY+G+           AVK++             K+ + E+ ++ +  H 
Sbjct: 6   ELLGSGSFGSVYEGL---NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHP 62

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHE 637
           N+V+ LG   E  N  +  E +  G+LA  L  +G+      +      QI  GL YLH 
Sbjct: 63  NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEP--VIRLYTRQILLGLEYLH- 119

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA--IRGTKGYVAPEW 695
                 +H DIK  NIL+D     +++DFG+AK     Q      A   +G+  ++APE 
Sbjct: 120 --DRNTVHRDIKGANILVDTNGVVKLADFGMAK-----QVVEFSFAKSFKGSPYWMAPEV 172

Query: 696 F-RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL----DD 750
             +        D++S G  +LE+ + +  +     E  A +    F   R+++L    D 
Sbjct: 173 IAQQGGYGLAADIWSLGCTVLEMATGKPPWSQL--EGVAAV----FKIGRSKELPPIPDH 226

Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L     EA + I          + C+Q DPSLRPT  ++L+
Sbjct: 227 L---SDEAKDFI----------LKCLQRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 93.4 bits (232), Expect = 4e-21
 Identities = 82/276 (29%), Positives = 131/276 (47%), Gaps = 35/276 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +++G G FG V+ G         T VA+K L +     E  F  E  ++ Q  H  LVRL
Sbjct: 12  KKLGAGQFGEVWMGYY----NGHTKVAIKSLKQGSMSPEA-FLAEANLMKQLQHPRLVRL 66

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
                + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+ ++       
Sbjct: 67  YAVVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KN 122

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWFRNS 699
            IH D++  NIL+ +    +I+DFGLA+L+  N+     TA  G K    + APE     
Sbjct: 123 YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY----TAREGAKFPIKWTAPEAINYG 178

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-EKLDDLVEGDMEA 758
           T T K DV+SFG+LL EI++  +         Y  +T+   +  +N E+   +   D   
Sbjct: 179 TFTIKSDVWSFGILLTEIVTYGRI-------PYPGMTN--PEVIQNLERGYRMPRPDN-- 227

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                C E+L  +   C +E P  RPT + +  +LE
Sbjct: 228 -----CPEELYELMRLCWKEKPEERPTFEYLRSVLE 258

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 93.5 bits (232), Expect = 4e-21
 Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 53/290 (18%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G++        AVA+K L   + + ++ +F +E  ++GQ  H N++RL 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           G   + +  +++ E++ NG L  +L      F + +    LR      IA G+ YL +  
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRG-----IAAGMKYLSD-- 125

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-----IRGTKGYVAPE 694
               +H D+  +NIL++     ++SDFGL+++L  +      T+     IR T    APE
Sbjct: 126 -MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWT----APE 180

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
                  T+  DV+SFG+++ E++S         GE       W      N ++      
Sbjct: 181 AIAYRKFTSASDVWSFGIVMWEVMS--------FGER----PYWDMS---NHEV------ 219

Query: 755 DMEALND-------IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
            M+A+ND       + C   +  + + C Q+D + RP    ++ +L+ ++
Sbjct: 220 -MKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 93.9 bits (233), Expect = 5e-21
 Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 55/300 (18%)

Query: 527 VGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVR 583
           +G G FG V K     L  R   T VAVK L       E ++  +E  ++ Q +H ++++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL-------------FGNLKPSW---------NLR 621
           L G C +    LL+ E+   G+L SFL              GN   S+          + 
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127

Query: 622 TNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
             I+F  QI+RG+ YL E    +++H D+  +N+L+ +    +ISDFGL++ +    S  
Sbjct: 128 DLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV 184

Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 738
            R+  R    ++A E   +   T + DV+SFGVLL EI++         G  Y  I  + 
Sbjct: 185 KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIAPER 237

Query: 739 AFDC----YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            F+     YR E+ ++             C E++  + + C +++P  RPT   + + LE
Sbjct: 238 LFNLLKTGYRMERPEN-------------CSEEMYNLMLTCWKQEPDKRPTFADISKELE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 93.7 bits (233), Expect = 5e-21
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 523 FKEEVGRGSFGIVYKG--VILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHK 579
            K E+G G+FG V+ G    L        VAVK L +    D  K+F+ E  ++    H+
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN--------------IA 625
           N+V+  G C EG   ++V+E++ +G L  FL  +   +  L++               IA
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-- 683
            QIA G++YL    S   +H D+  +N L+      +I DFG+        S+ + T   
Sbjct: 129 VQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGM--------SRDVYTTDY 177

Query: 684 --IRGTK----GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             + G       ++ PE       T + DV+SFGV+L EI +
Sbjct: 178 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 92.4 bits (230), Expect = 8e-21
 Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 24/274 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +++G GSFG+V +G   T+      VAVK L      D   +F  E  ++    H+NL+R
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCSA 641
           L G        ++V E    G+L   L  +    + + T  + A QIA G+ YL    S 
Sbjct: 61  LYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SK 116

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVAPEWFRNST 700
           + IH D+  +NILL      +I DFGL + L  N+   +          + APE  R  T
Sbjct: 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT 176

Query: 701 ITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
            +   DV+ FGV L E+ +   + +    G +     D   +  R E+ +          
Sbjct: 177 FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE--RLERPEA--------- 225

Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
               C + +  V + C   +P+ RPT   + + L
Sbjct: 226 ----CPQDIYNVMLQCWAHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 92.9 bits (232), Expect = 8e-21
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 21/203 (10%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKN---EVVVIGQTHH 578
            E++G G++G+VYK      + +   VA+KK   +  D E+E        E+ ++ +  H
Sbjct: 4   LEKLGEGTYGVVYKA---RDKKTGEIVALKK---IRLDNEEEGIPSTALREISLLKELKH 57

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLH 636
            N+V+LL      +   LV+E+ +   L  +L        +     +I +Q+ RGL Y H
Sbjct: 58  PNIVKLLDVIHTERKLYLVFEYCDM-DLKKYL-DKRPGPLSPNLIKSIMYQLLRGLAYCH 115

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              S +I+H D+KPQNIL++     +++DFGLA+   +         +  T  Y APE  
Sbjct: 116 ---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV--TLWYRAPEIL 170

Query: 697 RNSTI-TAKVDVYSFGVLLLEII 718
             S   +  VD++S G +  E+I
Sbjct: 171 LGSKHYSTAVDIWSVGCIFAEMI 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 92.4 bits (230), Expect = 1e-20
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 34/214 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLVR 583
           +G+G+FG V    I+  R +    A+K +++     +   +N   E  ++ + +H  LV 
Sbjct: 8   IGKGAFGKVC---IVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN 64

Query: 584 L-LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQ----------IARGL 632
           L   F DE +N  LV + L  G L           ++L   + F           I   L
Sbjct: 65  LWYSFQDE-ENMYLVVDLLLGGDL----------RYHLSQKVKFSEEQVKFWICEIVLAL 113

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YLH   S  IIH DIKP NILLD+  +  I+DF +A  +T +      T+  GT GY+A
Sbjct: 114 EYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT---TSTSGTPGYMA 167

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDI 726
           PE       +  VD +S GV   E +  ++ +  
Sbjct: 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG 201

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 8/110 (7%)

Query: 81  KTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSS-EIDIGTVAVGHMNDTG 139
           +TVVW   N+  NP       + L +D  LVL D  G+ VWSS     G+  V  + D G
Sbjct: 2   QTVVWVA-NRL-NPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDG 59

Query: 140 NFVLASSSSSKLWDSFSNPSDTLLPGQTMETK-----QGLFSRKSETNFS 184
           N VL  +S   LW SF +P+DTLLPGQ          + L S KS T+ S
Sbjct: 60  NLVLYDNSGKVLWQSFDHPTDTLLPGQKDGNVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 91.6 bits (227), Expect = 3e-20
 Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 37/294 (12%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKG-VILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVV 572
           EL  +   F EE+G  +FG +YKG + L        VA+K L  +    +  EF+ E  +
Sbjct: 1   ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASL 60

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---------------GNLKPS 617
           + + HH N+V LLG   + Q   +++E+LN G L  FL                G +K S
Sbjct: 61  MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS 120

Query: 618 WNLRT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
            +     +IA QIA G+ YL    S   +H D+  +NIL+ +  + +ISD GL++ +   
Sbjct: 121 LDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA 177

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
               ++        ++ PE       ++  D++SFGV+L EI      F   +   Y   
Sbjct: 178 DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI------FSFGLQPYYGFS 231

Query: 736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
                +  R  +L    E          C  ++  +   C QE PS RP  K +
Sbjct: 232 NQEVIEMVRKRQLLPCSE---------DCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 77/292 (26%), Positives = 122/292 (41%), Gaps = 53/292 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL---DRVFQDGEKE-------FKNEVVVIG 574
           E +G G+FG VYK  +         +A+K++   +  F   ++E         +EV +I 
Sbjct: 6   EHLGSGAFGCVYK--VRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIK 63

Query: 575 -QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS---------WNLRTNI 624
            Q  H N+VR      E     +V + +    L    F +LK           WN    I
Sbjct: 64  EQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGE-HFNSLKEKKQRFTEERIWN----I 118

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
             Q+   L YLH++   +I+H D+ P NI+L +     I+DFGLAK     Q ++  T++
Sbjct: 119 FVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK---QKQPESKLTSV 173

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
            GT  Y  PE  +N     K DV++FG +L ++ + +  F                  Y 
Sbjct: 174 VGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPF------------------YS 215

Query: 745 NEKLD---DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
              L     +VE   E L +    E +  V   C+  D   RP + +V  M+
Sbjct: 216 TNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 90.9 bits (226), Expect = 5e-20
 Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 25/210 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHKNLV 582
            ++G G++G+VYK      + +   VA+KK+   F+          E+ ++ + +H N++
Sbjct: 5   GKIGEGTYGVVYKA---RDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNII 61

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSA 641
           +LL       +  LV+EF++   L   +    +    +L  +  +Q+ +GL + H   S 
Sbjct: 62  KLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SH 117

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            I+H D+KP+N+L++     +++DFGLA+           + +R    YV   W+R   +
Sbjct: 118 GILHRDLKPENLLINTEGVLKLADFGLARSF--------GSPVRPYTHYVVTRWYRAPEL 169

Query: 702 -------TAKVDVYSFGVLLLEIISCRKSF 724
                  +  VD++S G +  E++S R  F
Sbjct: 170 LLGDKGYSTPVDIWSVGCIFAELLSRRPLF 199

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 91.0 bits (226), Expect = 5e-20
 Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 10/198 (5%)

Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T +++   VAVKK+D   Q   +   NEVV++    H N
Sbjct: 22  DNFVK-IGEGSTGIV---CIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPN 77

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         + T +   + + L +LH   +
Sbjct: 78  IVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLAVLKALSFLH---A 133

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R ++ GT  ++APE      
Sbjct: 134 QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPEVISRLP 191

Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 192 YGTEVDIWSLGIMVIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 90.5 bits (224), Expect = 6e-20
 Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 44/277 (15%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNL 581
           E +G+GSFG VYKG+      +   VA+K +D   ++ E E ++   E+ V+ Q     +
Sbjct: 10  ERIGKGSFGEVYKGI---DNRTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYI 64

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHED 638
            R  G   +G    ++ E+L  G+    L    KP     T IA    +I +GL YLH  
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLH-- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S + IH DIK  N+LL +  + +++DFG+A  LT  Q K  R    GT  ++APE  + 
Sbjct: 119 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQ 175

Query: 699 STITAKVDVYSFGVLLLEIISCRKSF-DIE-MGEEYAILTDW--AFDCYRNEKLDDLVEG 754
           S    K D++S G+  +E+        D+  M   + I  +     +   ++   + VE 
Sbjct: 176 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEA 235

Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                               C+ +DP  RPT K++L+
Sbjct: 236 --------------------CLNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 90.3 bits (225), Expect = 6e-20
 Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 13/204 (6%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQ-THHKNLV 582
           +++G G+FG VY       + +   VA+KK+ + F   E+     EV  + +   H N+V
Sbjct: 5   KQLGDGTFGSVYLAR---NKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIV 61

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSA 641
           +L     E      V+E++             KP S ++  +I +QI +GL ++H     
Sbjct: 62  KLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KH 118

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF-RNST 700
              H D+KP+N+L+      +I+DFGLA+ +   +S+   T    T+ Y APE   R+++
Sbjct: 119 GFFHRDLKPENLLVSGPEVVKIADFGLAREI---RSRPPYTDYVSTRWYRAPEILLRSTS 175

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            ++ VD+++ G ++ E+ + R  F
Sbjct: 176 YSSPVDIWALGCIMAELYTLRPLF 199

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 90.2 bits (224), Expect = 7e-20
 Identities = 63/218 (28%), Positives = 114/218 (52%), Gaps = 34/218 (15%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL----------DRVFQDGEKEFKNEVVVIG 574
           E +G+G++G VY  + +TT      +AVK++          D   +D  K  ++E+  + 
Sbjct: 7   ELIGKGTYGRVYLALNVTT---GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLK 63

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVY-EFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARG 631
              H N+V+ LGF +  +  L ++ E++  G++ S L  +G  +    L      Q+  G
Sbjct: 64  DLDHLNIVQYLGF-ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQ--LVRFFTEQVLEG 120

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-----RTAIRG 686
           L YLH   S  I+H D+K  N+L+D     +ISDFG++K     +S  I       +++G
Sbjct: 121 LAYLH---SKGILHRDLKADNLLVDADGICKISDFGISK-----KSDDIYDNDQNMSMQG 172

Query: 687 TKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRK 722
           +  ++APE   + +   +AKVD++S G ++LE+ + R+
Sbjct: 173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 89.9 bits (223), Expect = 9e-20
 Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 44/288 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G FG V +G +     S   VAVK  KLD       +EF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 585 LGFCDEGQNR------LLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAF--QIARGL 632
           +G C E  +       +++  F+ +G L SFL     G L     L+T + F   IA G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL----TLNQSKAIRTAIRGTK 688
            YL    +   IH D+  +N +L +     ++DFGL+K +       Q +  +  ++   
Sbjct: 127 EYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK--- 180

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNE 746
            ++A E   +   T+K DV++FGV + EI +  ++    +E  E Y    D+     R +
Sbjct: 181 -WIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY----DYLRHGNRLK 235

Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           + +D             C+++L  +   C + DP  RPT  K+ ++LE
Sbjct: 236 QPED-------------CLDELYDLMYSCWRADPKDRPTFTKLREVLE 270

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 90.4 bits (224), Expect = 1e-19
 Identities = 87/308 (28%), Positives = 138/308 (44%), Gaps = 48/308 (15%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 572
           Y  LE     F++ +G G+FG V K  I        A   +  +   +D  ++F  E+ V
Sbjct: 1   YPVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 60

Query: 573 IGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA-- 629
           + +  HH N++ LLG C+      L  E+  +G L  FL    + S  L T+ AF IA  
Sbjct: 61  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANS 116

Query: 630 ------------------RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
                             RG+ YL +    Q IH D+  +NIL+ + Y A+I+DFGL++ 
Sbjct: 117 TASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG 173

Query: 672 LTLNQSKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
             +   K + R  +R    ++A E    S  T   DV+S+GVLL EI+S         G 
Sbjct: 174 QEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-------GT 222

Query: 731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
            Y  +T     C   E  + L +G       + C +++  +   C +E P  RP+  ++L
Sbjct: 223 PYCGMT-----C--AELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274

Query: 791 QMLEGVVE 798
             L  ++E
Sbjct: 275 VSLNRMLE 282

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 36/275 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKK---LDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG       L  RT   ++ V K   L R+ +   ++  NE+V++    H N++ 
Sbjct: 8   LGKGAFGEA----TLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIA 63

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--FQIARGLLYLHEDCSA 641
                 +    L+  E+ N GTL   +       +     +   FQI   + Y+H+   A
Sbjct: 64  YYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---A 120

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            I+H DIK  NI L      ++ DFG++K+  L    ++   + GT  Y++PE  +    
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKI--LGSEYSMAETVVGTPYYMSPELCQGVKY 178

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME-ALN 760
             K D+++ G +L E+++ +++FD                        +LV   ++    
Sbjct: 179 NFKSDIWALGCVLYELLTLKRTFD-------------------ATNPLNLVVKIVQGNYT 219

Query: 761 DIKCV--EKLVMVSIWCIQEDPSLRPTMKKVLQML 793
            +  V   +L+ +    +Q+DP  RPT  +VL   
Sbjct: 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 89.7 bits (222), Expect = 1e-19
 Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 50/280 (17%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNL 581
           E +G+GSFG V+KG+    RT    VA+K +D   ++ E E ++   E+ V+ Q     +
Sbjct: 10  ERIGKGSFGEVFKGI--DNRTQQV-VAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYV 64

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
            +  G   +G    ++ E+L  G+    L       + + T +  +I +GL YLH   S 
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLH---SE 120

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           + IH DIK  N+LL +  + +++DFG+A  LT  Q K  R    GT  ++APE  + S  
Sbjct: 121 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAY 178

Query: 702 TAKVDVYSFGVLLLEIIS----------CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
            +K D++S G+  +E+             R  F I       +  +++    +  K  + 
Sbjct: 179 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFS----KPFK--EF 232

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           ++                     C+ +DPS RPT K++L+
Sbjct: 233 IDA--------------------CLNKDPSFRPTAKELLK 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 89.2 bits (221), Expect = 1e-19
 Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 31/276 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           F +E+G G FG+V  G           VA+K + +     E EF  E  V+ +  H+ LV
Sbjct: 8   FLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMKLSHEKLV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSA 641
           +L G C + +   +V E+++NG L ++L  + K    +    +   +  G+ YL    S 
Sbjct: 63  QLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SK 119

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFRN 698
           Q IH D+  +N L+DD    ++SDFGL++ +  ++     T+  G+K  V    PE    
Sbjct: 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEVLLY 175

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
           S  ++K DV++FGVL+ E+ S               L    ++ + N +  + V   +  
Sbjct: 176 SKFSSKSDVWAFGVLMWEVYS---------------LGKMPYERFNNSETVEKVSQGLRL 220

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                  EK+  +   C  E    RPT +++L  +E
Sbjct: 221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 88.9 bits (221), Expect = 1e-19
 Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 29/273 (10%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G G+ G+V K +    R +   +AVK + R+  + E   K    E+ ++ + +   +V
Sbjct: 8   ELGAGNSGVVSKVLH---RPTGKIMAVKTI-RLEIN-EAIQKQILRELDILHKCNSPYIV 62

Query: 583 RLLG-FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDC 639
              G F + G   + + E+++ G+L   L          R    IA  + +GL YLHE  
Sbjct: 63  GFYGAFYNNGDISICM-EYMDGGSLDKILKEVQGR-IPERILGKIAVAVLKGLTYLHEK- 119

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
             +IIH D+KP NIL++     ++ DFG++  L    S A      GT  Y+APE  + +
Sbjct: 120 -HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV--NSLAKTFV--GTSSYMAPERIQGN 174

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
             + K D++S G+ L+E+ + R  +  E      I           E L  +V      L
Sbjct: 175 DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF----------ELLQYIVNEPPPRL 224

Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
              K           C+ +DP  RP+ K++L+ 
Sbjct: 225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 88.9 bits (221), Expect = 1e-19
 Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 33/217 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             + +G G++G VYK   + T     A+ V KL+    D  +  + E+ ++ +  H N+V
Sbjct: 7   LIQRIGSGTYGDVYKARDIATGELV-AIKVIKLEP--GDDFEIIQQEISMLKECRHPNIV 63

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLA---SFLFGNLKPSWNLRTNIAF---QIARGLLYLH 636
              G         +V E+   G+L        G L         IA+   +  +GL YLH
Sbjct: 64  AYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLS-----ELQIAYVCRETLKGLAYLH 118

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
           E      IH DIK  NILL +  + +++DFG++  LT   +K  R +  GT  ++APE  
Sbjct: 119 E---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK--RKSFIGTPYWMAPEVA 173

Query: 697 ---RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
              R      K D+++ G      I+      IE+ E
Sbjct: 174 AVERKGGYDGKCDIWALG------ITA-----IELAE 199

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 36/285 (12%)

Query: 527 VGRGSFGIVYKGV---ILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           +G G+FG VY+G    IL   +    VAVK L +   D EK EF  E  ++   +H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRT-----NIAFQIARGLLYL 635
           +LLG C   + + ++ E +  G L S+L       +   L T     +I   +A+G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 636 HEDCSAQIIHCDIKPQNILLD--DYYNAR---ISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
            +      IH D+  +N L+    Y   R   I DFGLA+ +  +              +
Sbjct: 123 EQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRW 179

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLD 749
           +APE   +   T + DV+SFGVL+ EI++        +G++ Y  L +     +      
Sbjct: 180 MAPESLLDGKFTTQSDVWSFGVLMWEILT--------LGQQPYPALNNQEVLQHVTA--- 228

Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
               G ++   +  C +K+  +   C  +DPS RPT  ++ ++L+
Sbjct: 229 ---GGRLQKPEN--CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 41/299 (13%)

Query: 511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTST--TAVAVKKLDRV-FQDGEKEFK 567
           F    L+E T      +GRG FG V+             T V VK L +   ++ + EF+
Sbjct: 2   FPRSNLQEIT-----TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFR 56

Query: 568 NEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN------LKP---SW 618
            E+ +  +  HKN+VRLLG C E +   ++ E+ + G L  FL         LKP   S 
Sbjct: 57  RELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLST 116

Query: 619 NLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
             +  +  QIA G+ +L    +A+ +H D+  +N L+      ++S   L+K +  ++  
Sbjct: 117 KQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 737
            +R A+   + ++APE  +    + K DV+SFGVL+ E+ +         GE  +  L+D
Sbjct: 174 KLRNALIPLR-WLAPEAVQEDDFSTKSDVWSFGVLMWEVFT--------QGELPFYGLSD 224

Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
                   E L+ L  G +E      C  +L  +M   W +  +P  RP+  +++  L 
Sbjct: 225 -------EEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAV--NPKDRPSFSELVSALG 274

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 88.7 bits (220), Expect = 2e-19
 Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 24/291 (8%)

Query: 517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIGQ 575
           EE    F +++G+G+FG V        + +T   VAVKKL     +  ++F+ E+ ++  
Sbjct: 2   EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKS 61

Query: 576 THHKNLVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARG 631
             H N+V+  G C   G+  L LV E+L  G+L  +L  + +   + R  + +  QI +G
Sbjct: 62  LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKG 120

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGY 690
           + YL    S + +H D+  +NIL++     +I DFGL K+L  ++    +R        +
Sbjct: 121 MEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFW 177

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS------FDIEMGEEYAILTDWAFDCY 743
            APE    S  +   DV+SFGV+L E+ +   KS      F   MG +           Y
Sbjct: 178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND----KQGQMIVY 233

Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
               L +L++ +        C  ++  +   C   DPS RP+  ++   +E
Sbjct: 234 H---LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 88.2 bits (218), Expect = 3e-19
 Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 27/271 (9%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ +  H+ LV+L 
Sbjct: 13  KLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 67

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSAQI 643
               E +   +V E+++ G+L  FL G +     L    ++A QIA G+ Y+        
Sbjct: 68  AVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 123

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + APE       T 
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTI 182

Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK 763
           K DV+SFG+LL E+ +  +                 +    N ++ D VE         +
Sbjct: 183 KSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPCPPE 227

Query: 764 CVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           C E L  +   C +++P  RPT + +   LE
Sbjct: 228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 88.6 bits (220), Expect = 3e-19
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 24/205 (11%)

Query: 525 EEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHH---K 579
           E +GRG++G VY+G  + T R     VA+K ++    D +  + + EV ++ Q       
Sbjct: 7   ELIGRGAYGAVYRGKHVPTGRV----VALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL----YL 635
           N+ +  G   +G    ++ E+   G++ + +    K        I+  I R +L    Y+
Sbjct: 63  NITKYYGSYLKGPRLWIIMEYAEGGSVRTLM----KAGPIAEKYISV-IIREVLVALKYI 117

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H      +IH DIK  NIL+ +  N ++ DFG+A LL  N SK  R+   GT  ++APE 
Sbjct: 118 H---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAPEV 172

Query: 696 FRN-STITAKVDVYSFGVLLLEIIS 719
                    K D++S G+ + E+ +
Sbjct: 173 ITEGKYYDTKADIWSLGITIYEMAT 197

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 87.6 bits (217), Expect = 4e-19
 Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 37/278 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           F +E+G G FG+V+ G       +   VA+K +       E++F  E  V+ +  H  LV
Sbjct: 8   FMKELGSGQFGVVHLG----KWRAQIKVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +L G C + +   +V EF+ NG L ++L    G L     L  ++   +  G+ YL  + 
Sbjct: 63  QLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLL--SMCQDVCEGMEYLERN- 119

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
               IH D+  +N L+      ++SDFG+ + +  ++     T+  G K    +  PE F
Sbjct: 120 --SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY----TSSSGAKFPVKWSPPEVF 173

Query: 697 RNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
             S  ++K DV+SFGVL+ E+ +  +  F+ +   E   +    F  YR +     V   
Sbjct: 174 NFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYE- 232

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                        VM S W   E P  RPT  ++L+ +
Sbjct: 233 -------------VMYSCW--HEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 88.2 bits (218), Expect = 4e-19
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 10/201 (4%)

Query: 518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           E  D+F + +G GS GIV    I T + +   VAVKK+D   Q   +   NEVV++   H
Sbjct: 22  EYLDSFIK-IGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 77

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H+N+V +      G    +V EFL  G L   +         + T +   + R L YLH 
Sbjct: 78  HENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSYLH- 135

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             +  +IH DIK  +ILL      ++SDFG    ++    K  R ++ GT  ++APE   
Sbjct: 136 --NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKSLVGTPYWMAPEVIS 191

Query: 698 NSTITAKVDVYSFGVLLLEII 718
                 +VD++S G++++E+I
Sbjct: 192 RLPYGTEVDIWSLGIMVIEMI 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 87.5 bits (217), Expect = 5e-19
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 46/275 (16%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
              +G G FG VY+GV ++      AVAVK  K        EK F  E  ++ Q  H ++
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREK-FLQEAYIMRQFDHPHI 69

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDC 639
           V+L+G   E     +V E    G L S+L  N K S +L + I  ++Q++  L YL    
Sbjct: 70  VKLIGVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLE--- 124

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTA--IRGTKGYVAPEW 695
           S + +H DI  +N+L+      ++ DFGL++ L  ++S  KA +    I+    ++APE 
Sbjct: 125 SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE-DESYYKASKGKLPIK----WMAPES 179

Query: 696 FRNSTITAKVDVYSFGVLLLEIISC-RKSFD----------IEMGEE-----------YA 733
                 T+  DV+ FGV + EI+    K F           IE GE            Y+
Sbjct: 180 INFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 239

Query: 734 ILTD-WAFDCYRNEKLDDLVEGDMEALNDIKCVEK 767
           ++T  WA+D  +  +  +L       L+DI   EK
Sbjct: 240 LMTKCWAYDPSKRPRFTELK----AQLSDILQEEK 270

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 87.2 bits (216), Expect = 7e-19
 Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 16/204 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V        + +    A KKLD+     + GE+   NE  ++ +   + +V 
Sbjct: 1   LGKGGFGEVCA---CQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVS 57

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           L  +  E ++ L LV   +N G L   ++   +P +     I  A QI  GL +LH+   
Sbjct: 58  L-AYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-- 114

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I++ D+KP+N+LLDD+ N RISD GLA  + L   K I     GT GY+APE  +   
Sbjct: 115 -RIVYRDLKPENVLLDDHGNVRISDLGLA--VELKGGKKI-KGRAGTPGYMAPEVLQGEV 170

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
               VD ++ G  L E+I+ R  F
Sbjct: 171 YDFSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 87.1 bits (216), Expect = 9e-19
 Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 39/289 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKN----EVVVIGQTHHKN 580
           VG GS+G+V K      + +   VA+KK    F + E  K  K     E+ ++ Q  H+N
Sbjct: 9   VGEGSYGMVMK---CKHKETGQIVAIKK----FLESEDDKMVKKIAMREIRMLKQLRHEN 61

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASF-LFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           LV L+      +   LV+EF+++  L     + N      +R  + FQI RG+ + H   
Sbjct: 62  LVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL-FQILRGIEFCH--- 117

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  IIH DIKP+NIL+      ++ DFG A+  TL     + T    T+ Y APE     
Sbjct: 118 SHNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYTDYVATRWYRAPELLVGD 175

Query: 700 TITAK-VDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNEKL---DDLVE 753
           T   + VD+++ G L+ E+++    F  D ++ + Y I+        R++++   + L  
Sbjct: 176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235

Query: 754 GDMEALNDIKCVEKL---------VMVSIW--CIQEDPSLRPTMKKVLQ 791
           G    L ++K +E L         +++ +   C++ DP  RP+  ++L 
Sbjct: 236 G--MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 87.4 bits (216), Expect = 9e-19
 Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 10/198 (5%)

Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T ++S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 23  DNFIK-IGEGSTGIV---CIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         +   +   + + L  LH   +
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLKALSVLH---A 134

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG      +++    R ++ GT  ++APE      
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKSLVGTPYWMAPELISRLP 192

Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 193 YGPEVDIWSLGIMVIEMV 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 87.0 bits (215), Expect = 1e-18
 Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 33/293 (11%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L     +  K+F  E  ++    H++
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRT--------NIAFQ 627
           +V+  G C EG   ++V+E++ +G L  FL  +     L    N           +IA Q
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           IA G++YL    S   +H D+  +N L+ +    +I DFG+++ +       +       
Sbjct: 129 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 185

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++ PE       T + DV+S GV+L EI +  K               W +    NE 
Sbjct: 186 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ-------------PW-YQLSNNEV 231

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           ++ + +G +       C +++  + + C Q +P +R  +K++  +L+ + + S
Sbjct: 232 IECITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 86.5 bits (215), Expect = 1e-18
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV----AVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           + +G++G V+    L  + ST  +     +KK D + ++   +   E  ++ Q     +V
Sbjct: 1   ISKGAYGRVF----LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVV 56

Query: 583 RLL-GFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +L   F  + +N  LV E+L  G LAS L   G+L            +I   L YLH   
Sbjct: 57  KLYYSFQGK-KNLYLVMEYLPGGDLASLLENVGSLDEDV--ARIYIAEIVLALEYLH--- 110

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKL----LTLNQSKAIR--TAIRGTKGYVAP 693
           S  IIH D+KP NIL+D   + +++DFGL+K+      +N +   +    I GT  Y+AP
Sbjct: 111 SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAP 170

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIIS 719
           E       +  VD +S G +L E + 
Sbjct: 171 EVILGQGHSKTVDWWSLGCILYEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 86.4 bits (215), Expect = 1e-18
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHH 578
            F + +G GSFG V    ++  + S    A+K L +   V     +   NE  ++    H
Sbjct: 4   EFIKTLGTGSFGRVM---LVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH 60

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             LV L G   +  N  LV E++  G L S L  + +    +    A Q+   L YLH  
Sbjct: 61  PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH-- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPEWFR 697
            S  I++ D+KP+N+LLD     +I+DFG AK +        RT  + GT  Y+APE   
Sbjct: 119 -SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRV------KGRTYTLCGTPEYLAPEIIL 171

Query: 698 NSTITAKVDVYSFGVLLLEII 718
           +      VD ++ G+L+ E++
Sbjct: 172 SKGYGKAVDWWALGILIYEML 192

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 86.7 bits (214), Expect = 2e-18
 Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 26/268 (9%)

Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNLV 582
           +G G+FG VYKG+ +    T    VA+K L+     G K   EF +E +++    H +LV
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMASMDHPHLV 72

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSA 641
           RLLG C     +L V + + +G L  ++  +       L  N   QIA+G++YL E    
Sbjct: 73  RLLGVCLSPTIQL-VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---R 128

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLA+LL  ++ +      +    ++A E       
Sbjct: 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 188

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           T + DV+S+GV + E+++         G+ Y        D     ++ DL+E        
Sbjct: 189 THQSDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLEKGERLPQP 233

Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
             C   + MV + C   D   RP  K++
Sbjct: 234 PICTIDVYMVMVKCWMIDADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 86.3 bits (213), Expect = 2e-18
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 20/199 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNL 581
           E++G+GSFG V+KG+    RT    VA+K +D   ++ E E ++   E+ V+ Q     +
Sbjct: 10  EKIGKGSFGEVFKGI--DNRTQKV-VAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYV 64

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHED 638
            +  G   +     ++ E+L  G+    L    +P     T IA    +I +GL YLH  
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH-- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + 
Sbjct: 119 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQ 175

Query: 699 STITAKVDVYSFGVLLLEI 717
           S   +K D++S G+  +E+
Sbjct: 176 SAYDSKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 85.8 bits (212), Expect = 2e-18
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 20/203 (9%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK----NL 581
           E+G G+FG V KGV    R     VA+K L     + EK  ++E++   +  H+     +
Sbjct: 2   ELGSGNFGCVKKGV-YKMRKKQIDVAIKVLK---NENEKSVRDEMMREAEIMHQLDNPYI 57

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---FQIARGLLYLHED 638
           VR++G C E +  +LV E  + G L  FL G  K      +N+     Q++ G+ YL   
Sbjct: 58  VRMIGVC-EAEALMLVMEMASGGPLNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEG- 113

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTAIRGTKGYVAPEWF 696
                +H D+  +N+LL + + A+ISDFGL+K L  + S  KA R+A +    + APE  
Sbjct: 114 --KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA-RSAGKWPLKWYAPECI 170

Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
                +++ DV+S+G+ + E  S
Sbjct: 171 NFRKFSSRSDVWSYGITMWEAFS 193

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 86.2 bits (214), Expect = 2e-18
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 28/208 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQT---H 577
            E+G G++G VYK        +   VA+KK+       E+        E+ ++ Q     
Sbjct: 5   AEIGEGAYGTVYKA---RDLNTGRFVALKKV--RVPLSEEGIPLSTLREIALLKQLESFE 59

Query: 578 HKNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIA 629
           H N+VRLL  C     D      LV+E ++   LA++L    KP      ++ ++  Q+ 
Sbjct: 60  HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIK-DLMRQLL 117

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           RG+ +LH   S +I+H D+KPQNIL+      +I+DFGLA++ +   +    T++  T  
Sbjct: 118 RGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLW 171

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEI 717
           Y APE    S+    VD++S G +  E+
Sbjct: 172 YRAPEVLLQSSYATPVDMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 29/283 (10%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   ++++G G FG V+    + T    T VAVK +       E  F  E  V+ 
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVW----MATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMK 56

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARG 631
              H  LV+L     + +   ++ EF+  G+L  FL    G+ +P   L  + + QIA G
Sbjct: 57  TLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEG 114

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + ++ +      IH D++  NIL+      +I+DFGLA+++  N+  A R   +    + 
Sbjct: 115 MAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWT 170

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           APE     + T K DV+SFG+LL+EI++  +     M     I        YR  + +  
Sbjct: 171 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA--LERGYRMPRPE-- 226

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                       C E+L  + + C +  P  RPT + +  +L+
Sbjct: 227 -----------NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 85.0 bits (210), Expect = 3e-18
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 19/204 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKN---EVVVIGQTHHKN 580
           E +G+G++G VY G  LT +    AV   +LD       EKE++    EV ++    H N
Sbjct: 6   EVLGKGAYGTVYCG--LTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN 63

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNL-KPSWNLRTNIAFQIARGLLYLHE 637
           +V+ LG C +     +  EF+  G+++S L  FG L +P +   T    QI  G+ YLH 
Sbjct: 64  IVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK---QILDGVAYLHN 120

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL---TLNQSKA-IRTAIRGTKGYVAP 693
           +C   ++H DIK  N++L      ++ DFG A+ L    L+ + + +  ++ GT  ++AP
Sbjct: 121 NC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177

Query: 694 EWFRNSTITAKVDVYSFGVLLLEI 717
           E    S    K D++S G  + E+
Sbjct: 178 EVINESGYGRKSDIWSIGCTVFEM 201

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 85.0 bits (210), Expect = 3e-18
 Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 35/281 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLL 585
           +G G FG V  G +         VA+K L   + + ++ +F +E  ++GQ  H N++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           G   + +  ++V E++ NG+L +FL      F  ++    LR      IA G+ YL  D 
Sbjct: 72  GVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRG-----IASGMKYL-SDM 125

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
               +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG K    + APE  
Sbjct: 126 GY--VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIPIRWTAPEAI 181

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
                T+  DV+S+G+++ E++S  +    EM  +  I                 +E   
Sbjct: 182 AYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA---------------IEEGY 226

Query: 757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                + C   L  + + C Q+D + RP  ++++ +L+ ++
Sbjct: 227 RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 4e-18
 Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 24/210 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRVFQDGEKEFKN----EVVVIGQTHH 578
             VG G++G+V K      R   T   VA+KK      + +++ K     EV V+ Q  H
Sbjct: 7   GVVGEGAYGVVLK-----CRNKATGEIVAIKKFKES--EDDEDVKKTALREVKVLRQLRH 59

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYL 635
           +N+V L           LV+E++   TL   L    G L P         +Q+ + + Y 
Sbjct: 60  ENIVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRS--YIWQLLQAIAYC 116

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S  IIH DIKP+NIL+ +    ++ DFG A+ L    +  + T    T+ Y APE 
Sbjct: 117 H---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL-TDYVATRWYRAPEL 172

Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSF 724
               T   K VDV++ G ++ E++     F
Sbjct: 173 LVGDTNYGKPVDVWAIGCIMAELLDGEPLF 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 84.7 bits (210), Expect = 4e-18
 Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 580
              E +G G+  +VY  + L        VA+K++D    Q    E + EV  + Q +H N
Sbjct: 4   ELIEVIGVGATAVVYAAICLPNNEK---VAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHE 637
           +V+       G    LV  +L+ G+L   +  +          IA    ++ +GL YLH 
Sbjct: 61  VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH- 119

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL---TLNQSKAIRTAIRGTKGYVAPE 694
             S   IH DIK  NILL +  + +I+DFG++  L        K  R    GT  ++APE
Sbjct: 120 --SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKV-RKTFVGTPCWMAPE 176

Query: 695 WFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-DWAFDCYRNEKLDDLV 752
                     K D++SFG+  +E+ +    +      +  +LT                 
Sbjct: 177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGA----- 231

Query: 753 EGDMEALNDIKCVEKLV--MVSIWCIQEDPSLRPTMKKVLQ 791
                   D K   K    M+S+ C+Q+DPS RPT +++L+
Sbjct: 232 --------DYKKYSKSFRKMISL-CLQKDPSKRPTAEELLK 263

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 84.7 bits (209), Expect = 4e-18
 Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 27/272 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +++G G FG V+ G    T    T VAVK L       E  F  E  ++ +  H  LV+L
Sbjct: 12  KKLGNGQFGEVWMG----TWNGNTKVAVKTLKPGTMSPES-FLEEAQIMKKLRHDKLVQL 66

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSAQ 642
                E +   +V E+++ G+L  FL      +  L    ++A Q+A G+ Y+       
Sbjct: 67  YAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MN 122

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
            IH D++  NIL+ D    +I+DFGLA+L+  N+  A R   +    + APE       T
Sbjct: 123 YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFT 181

Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
            K DV+SFG+LL E+++  +                 +    N ++ + VE         
Sbjct: 182 IKSDVWSFGILLTELVTKGRV---------------PYPGMNNREVLEQVERGYRMPCPQ 226

Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            C   L  + + C ++DP  RPT + +   LE
Sbjct: 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 84.9 bits (210), Expect = 5e-18
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
           E++G G++G+VYK      R +   +A+KK+ R+ Q+ E        E+ ++ +  H N+
Sbjct: 8   EKIGEGTYGVVYKA---RDRVTNETIALKKI-RLEQEDEGVPSTAIREISLLKEMQHGNI 63

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDC 639
           VRL       +   LV+E+L+   L   +  +   + N R      +QI RG+ Y H   
Sbjct: 64  VRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH--- 119

Query: 640 SAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRTAIRG--TKGYVAPEWF 696
           S +++H D+KPQN+L+D   NA +++DFGLA+   +     +RT      T  Y APE  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI----PVRTFTHEVVTLWYRAPEIL 175

Query: 697 RNS-TITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             S   +  VD++S G +  E+++ +  F  D E+ E + I
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKI 216

Length = 294

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 88.7 bits (220), Expect = 6e-18
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)

Query: 549 AVAVKKLDRVFQDGEKE---FKNEVVVIGQTHHKNLVRLLGFCDEGQ---NRLL-VYEFL 601
            VA+K L     + E +   F+ E  +  + +H N+V LL   D G+     L  V+E++
Sbjct: 5   EVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALL---DSGEAPPGLLFAVFEYV 61

Query: 602 NNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---D 656
              TL   L   G L      R  +  Q+   L   H      I+H D+KPQNI++    
Sbjct: 62  PGRTLREVLAADGALPAGETGR--LMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTG 116

Query: 657 DYYNARISDFGLAKLLTLNQSKAIRTAIR-----GTKGYVAPEWFRNSTITAKVDVYSFG 711
              +A++ DFG+  LL   +   + T  R     GT  Y APE  R   +T   D+Y++G
Sbjct: 117 VRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWG 176

Query: 712 VLLLE 716
           ++ LE
Sbjct: 177 LIFLE 181

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 84.3 bits (208), Expect = 7e-18
 Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 32/220 (14%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L    +   ++F+ E  ++    H++
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----------------FGNLKPSWNLRTN 623
           +VR  G C EG+  L+V+E++ +G L  FL                  G L     L   
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA-- 126

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--R 681
           IA QIA G++YL    S   +H D+  +N L+      +I DFG+++ +       +  R
Sbjct: 127 IASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 183

Query: 682 T--AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           T   IR    ++ PE       T + D++SFGV+L EI +
Sbjct: 184 TMLPIR----WMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 85.4 bits (212), Expect = 7e-18
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V       T+T    VA+KKL R FQ     K    E+ ++    H+N++ L
Sbjct: 23  VGSGAYGQVCSAFD--TKTGRK-VAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGL 79

Query: 585 LG-FC-----DEGQNRLLVYEF----LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           L  F      ++ Q+  LV       LNN      +    K S +    + +QI RGL Y
Sbjct: 80  LDVFTPASSLEDFQDVYLVTHLMGADLNN------IVKCQKLSDDHIQFLVYQILRGLKY 133

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           +H   SA IIH D+KP NI +++    +I DFGLA           R       GYVA  
Sbjct: 134 IH---SAGIIHRDLKPSNIAVNEDCELKILDFGLA-----------RHTDDEMTGYVATR 179

Query: 695 WFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           W+R   I          VD++S G ++ E+++ +  F
Sbjct: 180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 83.9 bits (207), Expect = 8e-18
 Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 11/197 (5%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +++G G FG V+ G       ++T VAVK L +      + F  E  ++    H  LVRL
Sbjct: 12  KKLGAGQFGEVWMGYY----NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 66

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSAQ 642
                + +   ++ E++  G+L  FL  +      L   I F  QIA G+ Y+       
Sbjct: 67  YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---N 123

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
            IH D++  N+L+ +    +I+DFGLA+++  N+  A R   +    + APE     + T
Sbjct: 124 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFT 182

Query: 703 AKVDVYSFGVLLLEIIS 719
            K DV+SFG+LL EI++
Sbjct: 183 IKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 84.5 bits (210), Expect = 8e-18
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 34/211 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKE-----FKNEVVVIGQTHH 578
            ++G G++G VYK         T   VA+KK+     + EKE        E+ ++ +  H
Sbjct: 5   AQIGEGTYGQVYKA----RNKKTGELVALKKIR---MENEKEGFPITAIREIKLLQKLRH 57

Query: 579 KNLVRLLGFC-DEGQNRL-LVYEFLN---NGTLAS----FLFGNLKPSWNLRTNIAFQIA 629
            N+VRL      +G+  + +V+E+++    G L S    F    +K           Q+ 
Sbjct: 58  PNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIK-------CYMKQLL 110

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
            GL YLH   S  I+H DIK  NIL+++    +++DFGLA+  T  ++ A  T    T  
Sbjct: 111 EGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYT-KRNSADYTNRVITLW 166

Query: 690 YVAPEWFRNSTI-TAKVDVYSFGVLLLEIIS 719
           Y  PE    +T    +VD++S G +L E+  
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFL 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 83.8 bits (207), Expect = 1e-17
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 28/288 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLV 582
             +G G FG V           T   VAVK L R   Q     +K E+ ++   +H+N+V
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 583 RLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHED 638
           +  G C E  G+   L+ E++  G+L  +L    K   NL   + F  QI  G+ YLH  
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYL---PKHKLNLAQLLLFAQQICEGMAYLH-- 124

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL-TLNQSKAIRTAIRGTKGYVAPEWFR 697
            S   IH D+  +N+LLD+    +I DFGLAK +   ++   +R        + A E  +
Sbjct: 125 -SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK 183

Query: 698 NSTITAKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD 750
            +  +   DV+SFGV L E++       S  K F+  +G +   +T          +L +
Sbjct: 184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMT--------VVRLIE 235

Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
           L+E  M       C +++ ++   C + +   RPT + ++ +L+ +  
Sbjct: 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 83.3 bits (206), Expect = 1e-17
 Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKE---FKNEVVVIGQTHHKNL 581
           +G+G+FG VY    + T      +AVK++  D    + +KE    + E+ ++    H+ +
Sbjct: 10  LGQGAFGRVYLCYDVDT---GRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI 66

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+  G   + +   +  E++  G++   L  +G L  +  +      QI  G+ YLH   
Sbjct: 67  VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGAL--TETVTRKYTRQILEGVEYLH--- 121

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
           S  I+H DIK  NIL D   N ++ DFG +K L T+  S     ++ GT  +++PE    
Sbjct: 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG 181

Query: 699 STITAKVDVYSFGVLLLEIIS 719
                K DV+S G  ++E+++
Sbjct: 182 EGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 84.5 bits (210), Expect = 1e-17
 Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 31/217 (14%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQ-THHK 579
            +++G+G++GIV+K +    R +   VA+KK+   F+   D ++ F+ E++ + +   H 
Sbjct: 12  LQKLGKGAYGIVWKAI---DRRTKEVVALKKIFDAFRNATDAQRTFR-EIMFLQELGDHP 67

Query: 580 NLVRLLGF--CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           N+V+LL     +  ++  LV+E++     A      L+     +  I +Q+ + L Y+H 
Sbjct: 68  NIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILEDVH--KRYIMYQLLKALKYIH- 124

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT---LNQSKAIRTAIRGTKGYVAPE 694
             S  +IH D+KP NILL+     +++DFGLA+ L+    N    + T       YVA  
Sbjct: 125 --SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTD------YVATR 176

Query: 695 WFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           W+R   I       T  VD++S G +L E++  +  F
Sbjct: 177 WYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLF 213

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 20/213 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVVIGQTHHKN 580
           + + +G+FG VY   +   R++    A+K L +     + +  N      +++ Q     
Sbjct: 2   KPISKGAFGSVY---LAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPY 58

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           + +L           LV E+LN G  AS +   G L   W  +  IA ++  G+  LH+ 
Sbjct: 59  VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDW-AKQYIA-EVVLGVEDLHQR 116

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               IIH DIKP+N+L+D   + +++DFGL++    N+         GT  Y+APE    
Sbjct: 117 ---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------FVGTPDYLAPETILG 167

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                  D +S G ++ E +     F  E  + 
Sbjct: 168 VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA 200

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 83.2 bits (206), Expect = 2e-17
 Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 26/239 (10%)

Query: 563 EKEFKNEVVVIGQTHHKNLVRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNL 620
           +K+   E+ +        +V+  G F DE  + + +  E+   G+L S ++  +K     
Sbjct: 43  QKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDS-IYKKVK-KRGG 100

Query: 621 RTN------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL 674
           R        IA  + +GL YLH   S +IIH DIKP NILL      ++ DFG++  L  
Sbjct: 101 RIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157

Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
           + +        GT  Y+APE  +    +   DV+S G+ LLE+   R  F  E GE    
Sbjct: 158 SLAG----TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE-GEPPLG 212

Query: 735 LTDWAFDCYR--NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             +         N +L D      E  N IK  E+       C+++DP+ RPT   +L+
Sbjct: 213 PIELLSYIVNMPNPELKD------EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 41/211 (19%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             E++G GS+G VYK      + +   VA+K +  V +D + E   E+ ++ Q     +V
Sbjct: 7   ILEKLGEGSYGSVYKA---IHKETGQVVAIKVV-PVEEDLQ-EIIKEISILKQCDSPYIV 61

Query: 583 RLLGFCDEGQNRLLVYEF----------------LNNGTLASFLFGNLKPSWNLRTNIAF 626
           +  G   +  +  +V E+                L    +A+ L+  LK           
Sbjct: 62  KYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLK----------- 110

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
               GL YLH   S + IH DIK  NILL++   A+++DFG++  LT   +K   T I G
Sbjct: 111 ----GLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR-NTVI-G 161

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEI 717
           T  ++APE  +      K D++S G+  +E+
Sbjct: 162 TPFWMAPEVIQEIGYNNKADIWSLGITAIEM 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 83.0 bits (205), Expect = 3e-17
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 42/226 (18%)

Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           ++G+G+FG V++     L      T VAVK L +    D + +F+ E  ++ +  H N+V
Sbjct: 12  DIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIV 71

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN----------------------- 619
           +LLG C  G+   L++E++  G L  FL     P                          
Sbjct: 72  KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHR-SPRAQCSLSHSTSSARKCGLNPLPLSCT 130

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL------AKLLT 673
            +  IA Q+A G+ YL E    + +H D+  +N L+ +    +I+DFGL      A    
Sbjct: 131 EQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187

Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
            +++ AI   IR    ++ PE    +  T + DV+++GV+L EI S
Sbjct: 188 ASENDAI--PIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 82.2 bits (203), Expect = 5e-17
 Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 36/220 (16%)

Query: 522 NFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIG 574
           NF+  E++G G++G+VYK      + +   VA+KK+ R+  D E E        E+ ++ 
Sbjct: 1   NFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKI-RL--DTETEGVPSTAIREISLLK 54

Query: 575 QTHHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARG 631
           + +H N+V+LL      +N+L LV+EFL+   L  F+  +        L  +  FQ+ +G
Sbjct: 55  ELNHPNIVKLLDVI-HTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V
Sbjct: 113 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEV 161

Query: 692 APEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
              W+R   I       +  VD++S G +  E+++ R  F
Sbjct: 162 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 81.6 bits (201), Expect = 6e-17
 Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 39/295 (13%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKL-DRVFQDGEKEFKNEVV 571
           E+  +T  F EE+G   FG VYKG +  T     T AVA+K L D+      +EFK+E +
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAM 60

Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--------GNLKPSWNLRT- 622
           +  +  H N+V LLG   + Q   +++ + ++  L  FL         G+      +++ 
Sbjct: 61  MRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKST 120

Query: 623 -------NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTL 674
                  +I  QIA G+ +L    S  ++H D+  +N+L+ D  N +ISD GL + +   
Sbjct: 121 LEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA 177

Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
           +  K +  ++   + +++PE       +   D++S+GV+L E+ S            Y +
Sbjct: 178 DYYKLMGNSLLPIR-WMSPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YGL 224

Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
                +  Y N+ + +++           C   +  + + C  E PS RP  K +
Sbjct: 225 ---QPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 80.9 bits (199), Expect = 8e-17
 Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 27/271 (9%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G+G FG V+ G    T   TT VA+K L       E  F  E  ++ +  H  LV L 
Sbjct: 13  KLGQGCFGEVWMG----TWNGTTKVAIKTLKPGTMMPEA-FLQEAQIMKKLRHDKLVPLY 67

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHEDCSAQI 643
               E +   +V EF+  G+L  FL         L    ++A QIA G+ Y+        
Sbjct: 68  AVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNY 123

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH D++  NIL+ D    +I+DFGLA+L+  N+  A R   +    + APE       T 
Sbjct: 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTI 182

Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK 763
           K DV+SFG+LL E+++  +                 +    N ++ + VE          
Sbjct: 183 KSDVWSFGILLTELVTKGRV---------------PYPGMVNREVLEQVERGYRMPCPQG 227

Query: 764 CVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           C E L  +   C ++DP  RPT + +   LE
Sbjct: 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 80.4 bits (198), Expect = 9e-17
 Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 39/278 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E +G+G+FG V+KG    T    T VAVK   + + Q+ + +F +E  ++ Q  H N+V+
Sbjct: 1   ELLGKGNFGEVFKG----TLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVK 56

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDC 639
           L+G C + Q   +V E +  G   SFL    K    L+T      A   A G+ YL    
Sbjct: 57  LIGVCTQRQPIYIVMELVPGGDFLSFL---RKKKDELKTKQLVKFALDAAAGMAYLE--- 110

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK----GYVAPEW 695
           S   IH D+  +N L+ +    +ISDFG+++     +   I ++  G K     + APE 
Sbjct: 111 SKNCIHRDLAARNCLVGENNVLKISDFGMSR----QEDDGIYSS-SGLKQIPIKWTAPEA 165

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
                 +++ DV+S+G+LL E  S               L    +    N++  + VE  
Sbjct: 166 LNYGRYSSESDVWSYGILLWETFS---------------LGVCPYPGMTNQQAREQVEKG 210

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                  KC + +  V   C    P  RP   ++ + L
Sbjct: 211 YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 80.4 bits (198), Expect = 1e-16
 Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 18/196 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G FG V  G     R +  AV   K D   Q     F  E  V+ Q  H NLV+LLG
Sbjct: 14  IGKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQLLG 66

Query: 587 FCDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
              E +  L +V E++  G+L  +L   G      +     +  +   + YL    +   
Sbjct: 67  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNF 123

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++ T    APE  R    + 
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVKWT----APEALREKKFST 178

Query: 704 KVDVYSFGVLLLEIIS 719
           K DV+SFG+LL EI S
Sbjct: 179 KSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 80.7 bits (199), Expect = 1e-16
 Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 27/276 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+F   Y+   + T T      V  +     + E+     + E+ ++ + +H ++
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +R+LG   E  +  L  E++  G+++  L  +G  K    +  N   Q+ RGL YLHE+ 
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE--AVIINYTEQLLRGLSYLHEN- 122

Query: 640 SAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLNQSKA--IRTAIRGTKGYVAPEWF 696
             QIIH D+K  N+L+D      RI+DFG A  L    + A   +  + GT  ++APE  
Sbjct: 123 --QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVL 180

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGD 755
           R        DV+S G +++E+ + +  ++ E      A++    F          + E  
Sbjct: 181 RGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI----FKIASATTAPSIPEHL 236

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              L D         V++ C++  P  RP  +++L+
Sbjct: 237 SPGLRD---------VTLRCLELQPEDRPPSRELLK 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 31/221 (14%)

Query: 516 LEEATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           L + T  F   E +G G++G VYK     T      VA+K +D + +D E+E K E  ++
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQ---LVAIKIMD-IIEDEEEEIKEEYNIL 56

Query: 574 GQ-THHKNLVRLLG-------FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTN- 623
            + ++H N+    G         ++ Q  L LV E    G++   + G  K    L+   
Sbjct: 57  RKYSNHPNIATFYGAFIKKNPPGNDDQ--LWLVMELCGGGSVTDLVKGLRKKGKRLKEEW 114

Query: 624 IAF---QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
           IA+   +  RGL YLHE+   ++IH DIK QNILL      ++ DFG++  L     +  
Sbjct: 115 IAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR-- 169

Query: 681 RTAIRGTKGYVAPEWF-----RNSTITAKVDVYSFGVLLLE 716
           R    GT  ++APE        +++  A+ DV+S G+  +E
Sbjct: 170 RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIE 210

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 82.0 bits (202), Expect = 1e-16
 Identities = 84/318 (26%), Positives = 134/318 (42%), Gaps = 46/318 (14%)

Query: 508 LPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-----DRV 558
           LP     EL        + +G G FG V      G+          VAVK L     D+ 
Sbjct: 1   LPADPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKD 60

Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSW 618
             D   E +  + +IG+  HKN++ LLG C +     ++ E+ + G L  +L     P  
Sbjct: 61  LSDLVSEME-MMKMIGK--HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGM 117

Query: 619 NLR----------------TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
           +                   + A+Q+ARG+ YL    S + IH D+  +N+L+ +    +
Sbjct: 118 DYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMK 174

Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +   
Sbjct: 175 IADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 234

Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
           S                +     E+L  L++          C  +L M+   C    PS 
Sbjct: 235 S---------------PYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQ 279

Query: 783 RPTMKKVLQMLEGVVEVS 800
           RPT K++++ L+ V+ V+
Sbjct: 280 RPTFKQLVEDLDRVLTVT 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 81.1 bits (200), Expect = 1e-16
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+K+++   Q  ++   NE++V+ +  H N+V  
Sbjct: 25  EKIGQGASGTVYTAIDVATGQE---VAIKQMNLQQQPKKELIINEILVMRENKHPNIVNY 81

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 82  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 137

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 195

Query: 705 VDVYSFGVLLLEII 718
           VD++S G++ +E++
Sbjct: 196 VDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 81.0 bits (200), Expect = 1e-16
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 9/203 (4%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQT-HH 578
           F + +G G+FG V +     L+   +   VAVK L       E+E   +E+ ++    +H
Sbjct: 39  FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH 98

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLH 636
           +N+V LLG C  G   L++ E+   G L +FL    +    L   ++F  Q+A+G+ +L 
Sbjct: 99  ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL- 157

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              S   IH D+  +N+LL      +I DFGLA+ +  + +  ++   R    ++APE  
Sbjct: 158 --ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI 215

Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
            N   T + DV+S+G+LL EI S
Sbjct: 216 FNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 81.8 bits (202), Expect = 1e-16
 Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 46/305 (15%)

Query: 497 NSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD 556
           +S   G+  +     S  ELE         +G G+ G VYK +    R +    A+K + 
Sbjct: 59  SSSASGSAPSAAKSLS--ELERV-----NRIGSGAGGTVYKVI---HRPTGRLYALKVIY 108

Query: 557 RVFQDG-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +D   ++   E+ ++   +H N+V+     D      ++ EF++ G+L     G   
Sbjct: 109 GNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLE----GTHI 164

Query: 616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
                  ++A QI  G+ YLH      I+H DIKP N+L++   N +I+DFG++++  L 
Sbjct: 165 ADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRI--LA 219

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKV-----DVYSFGVLLLEIISCRKSFDIEMGE 730
           Q+     +  GT  Y++PE                D++S GV +LE    R  F   +G 
Sbjct: 220 QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR--FPFGVGR 277

Query: 731 EYAILTDWA----FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM 786
           +     DWA      C  ++  +       E  + I C          C+Q +P+ R + 
Sbjct: 278 Q----GDWASLMCAICM-SQPPEAPATASREFRHFISC----------CLQREPAKRWSA 322

Query: 787 KKVLQ 791
            ++LQ
Sbjct: 323 MQLLQ 327

Length = 353

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 80.4 bits (198), Expect = 2e-16
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 14/203 (6%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V     +  + +    A KKLD+     + GEK    E  ++ + +   +V 
Sbjct: 1   LGKGGFGEV---CAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVN 57

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSA 641
           L    +   +  LV   +N G L   ++   +    +   I +  QI  G+L+LH   S 
Sbjct: 58  LAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SM 114

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            I++ D+KP+N+LLDD  N R+SD GLA  + L   K I T   GT GY+APE  +    
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLA--VELKDGKTI-TQRAGTNGYMAPEILKEEPY 171

Query: 702 TAKVDVYSFGVLLLEIISCRKSF 724
           +  VD ++ G  + E+++ R  F
Sbjct: 172 SYPVDWFAMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 80.3 bits (198), Expect = 2e-16
 Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 17/206 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV---VIGQTHHKNLVR 583
           +G+G FG V        R +    A KKL++      K ++  +V   ++ + H + +V 
Sbjct: 1   LGKGGFGEVSA---CQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVS 57

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNL---KPSWNLRTNIAF--QIARGLLYLHED 638
           L        +  LV   +N G L   ++ N+    P +       +  QI  GL +LH+ 
Sbjct: 58  LAYAFQTKTDLCLVMTIMNGGDLRYHIY-NVDEENPGFPEPRACFYTAQIISGLEHLHQR 116

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +II+ D+KP+N+LLD+  N RISD GLA  L   QSK    A  GT G++APE  + 
Sbjct: 117 ---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA--GTPGFMAPELLQG 171

Query: 699 STITAKVDVYSFGVLLLEIISCRKSF 724
                 VD ++ GV L E+I+ R  F
Sbjct: 172 EEYDFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 81.0 bits (201), Expect = 2e-16
 Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 38/212 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVR 583
           +G G++G+V   V    RT    VA+KK+  VF    D ++  + E+ ++    H+N++ 
Sbjct: 8   IGSGAYGVVCSAV--DKRTGRK-VAIKKISNVFDDLIDAKRILR-EIKLLRHLRHENIIG 63

Query: 584 LLG-FCDEGQNRL----LVYEFLNNGT-LASFLFGNLKPSWNLRTN----IAFQIARGLL 633
           LL               +V E +   T L   +    K    L  +      +QI RGL 
Sbjct: 64  LLDILRPPSPEDFNDVYIVTELM--ETDLHKVI----KSPQPLTDDHIQYFLYQILRGLK 117

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           YLH   SA +IH D+KP NIL++   + +I DFGLA+ +  ++ +           YV  
Sbjct: 118 YLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK-----GFLTEYVVT 169

Query: 694 EWFR-------NSTITAKVDVYSFGVLLLEII 718
            W+R       +S  T  +D++S G +  E++
Sbjct: 170 RWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 80.4 bits (198), Expect = 2e-16
 Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 40/291 (13%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L+       VAVK L        K+F+ E  ++    H++
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF------------------GNLKPSWNLRT 622
           +V+  G C +G   ++V+E++ +G L  FL                   G L  S  L  
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML-- 126

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
           +IA QIA G++YL    S   +H D+  +N L+      +I DFG+++ +       +  
Sbjct: 127 HIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 183

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
                  ++ PE       T + DV+SFGV+L EI +  K    ++     I      +C
Sbjct: 184 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI------EC 237

Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
                   + +G +     + C +++  + + C Q +P  R  +K++ ++L
Sbjct: 238 --------ITQGRVLERPRV-CPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 61/301 (20%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
           E++G G++G+VYKG     + +   VA+KK+ R+  + E        E+ ++ +  H N+
Sbjct: 6   EKIGEGTYGVVYKGR---NKKTGQIVAMKKI-RLESEEEGVPSTAIREISLLKELQHPNI 61

Query: 582 VRLLGFCDEGQNRL-LVYEFLN---NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           V L     + ++RL L++EFL+      L S   G    +  +++ + +QI +G+L+ H 
Sbjct: 62  VCLQDVLMQ-ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYL-YQILQGILFCH- 118

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG------TKGYV 691
             S +++H D+KPQN+L+D+    +++DFGLA        +A    +R       T  Y 
Sbjct: 119 --SRRVLHRDLKPQNLLIDNKGVIKLADFGLA--------RAFGIPVRVYTHEVVTLWYR 168

Query: 692 APEWFRNST-ITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI-------------- 734
           APE    S   +  VD++S G +  E+ + +  F  D E+ + + I              
Sbjct: 169 APEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228

Query: 735 ---LTDW--AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
              L D+   F  ++   L   V+ +++  + +  +EK+++        DP+ R + KK 
Sbjct: 229 VTSLPDYKNTFPKWKKGSLRSAVK-NLDE-DGLDLLEKMLIY-------DPAKRISAKKA 279

Query: 790 L 790
           L
Sbjct: 280 L 280

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 80.2 bits (197), Expect = 2e-16
 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+K+++   Q  ++   NE++V+ +  + N+V  
Sbjct: 25  EKIGQGASGTVYTAIDIATGQE---VAIKQMNLQQQPKKELIINEILVMRENKNPNIVNY 81

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 82  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALDFLH---SNQVI 137

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 195

Query: 705 VDVYSFGVLLLEII 718
           VD++S G++ +E++
Sbjct: 196 VDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 79.6 bits (197), Expect = 4e-16
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 16/209 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV+K     T      VA+KK  L R+      +   E+  +    H  +V+L
Sbjct: 8   IGEGAHGIVFKAKDRET---GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKL 64

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN-IAFQIARGLLYLHEDCSAQI 643
           L     G   +LV E++    L+  L    +P    +       + +G+ Y+H      I
Sbjct: 65  LDVFPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NGI 120

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TIT 702
           +H D+KP N+L+      +I+DFGLA+L +  + +     +  T+ Y APE    +    
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQV-ATRWYRAPELLYGARKYD 179

Query: 703 AKVDVYSFGVLLLEIISCRKSF----DIE 727
             VD+++ G +  E+++    F    DIE
Sbjct: 180 PGVDLWAVGCIFAELLNGSPLFPGENDIE 208

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 79/296 (26%), Positives = 127/296 (42%), Gaps = 60/296 (20%)

Query: 520 TDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVVI 573
             NFK E  +G+G F +VYK            VA+KK+ ++F+  + + +     E+ ++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKA---ICLLDGRVVALKKV-QIFEMMDAKARQDCLKEIDLL 56

Query: 574 GQTHHKNLVRLL-GFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRT--NIAFQ 627
            Q  H N+++ L  F +   N L +V E  + G L+  +  F   K     RT      Q
Sbjct: 57  KQLDHPNVIKYLASFIEN--NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQ 114

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           +   L ++H   S +I+H DIKP N+ +      ++ D GL +  +   + A   ++ GT
Sbjct: 115 LCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGT 169

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF------------DIEMGEEYAIL 735
             Y++PE    +    K D++S G LL E+ + +  F             IE   +Y  L
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC-DYPPL 228

Query: 736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                D Y +E+L DLV                      CI  DP  RP +  VLQ
Sbjct: 229 PA---DHY-SEELRDLVSR--------------------CINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 79.4 bits (195), Expect = 4e-16
 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVAT---GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 705 VDVYSFGVLLLEII 718
           VD++S G++ +E+I
Sbjct: 197 VDIWSLGIMAIEMI 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 79.0 bits (195), Expect = 5e-16
 Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 65/293 (22%)

Query: 530 GSFGIVYKGVIL-TTRTSTTAVAVK---------KLDRVFQDGEKEFKNEVVVIGQTHHK 579
           G+FG ++ G+++         V VK         ++  + Q+          + G   H+
Sbjct: 17  GTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCL-------LYG-LSHQ 68

Query: 580 NLVRLLGFCDEGQNRLLV-YEFLNNGTLASFL----FGNLKPSWNLRT----NIAFQIAR 630
           N++ +L  C E      V Y ++N G L  FL     G       L T    ++A QIA 
Sbjct: 69  NILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK--------LLTLNQSKAIRT 682
           G+ YLH      +IH DI  +N ++D+    +I+D  L++         L  N+++ ++ 
Sbjct: 129 GMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVK- 184

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAF 740
                  ++A E   N   ++  DV+SFGVLL E+++  ++   +I+  E  A L D   
Sbjct: 185 -------WMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-- 235

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
             YR  +              I C ++L  V   C   DP  RP+  +++Q L
Sbjct: 236 --YRLAQ-------------PINCPDELFAVMACCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 78.9 bits (195), Expect = 6e-16
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 37/231 (16%)

Query: 522 NFKEEVGRGSFGIVY----KGVILTTR---------TSTTAVAVKKL-DRVFQDGEKEFK 567
           NF E++G G FG V+     G+   +           +   VAVK L      +  ++F 
Sbjct: 8   NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFL 67

Query: 568 NEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----------FGNLKP 616
            EV ++ +    N+ RLLG C       ++ E++ NG L  FL             +   
Sbjct: 68  KEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSL 127

Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           S++    +A QIA G+ YL    S   +H D+  +N L+   Y  +I+DFG+++ L  + 
Sbjct: 128 SFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD 184

Query: 677 SKAIR----TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRK 722
              ++      IR    ++A E       T K DV++FGV L EI++ CR+
Sbjct: 185 YYRVQGRAPLPIR----WMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 78.9 bits (194), Expect = 6e-16
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 9/193 (4%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G GS GIV    I   + S   VAVK +D   Q   +   NEVV++    H+N+V + 
Sbjct: 28  KIGEGSTGIV---CIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMY 84

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
                G+   ++ EFL  G L   +    + +      +   + + L YLH   S  +IH
Sbjct: 85  KSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLH---SQGVIH 140

Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKV 705
            DIK  +ILL      ++SDFG    ++ +  K  R ++ GT  ++APE    +    +V
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRTPYGTEV 198

Query: 706 DVYSFGVLLLEII 718
           D++S G++++E++
Sbjct: 199 DIWSLGIMVIEMV 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 78.7 bits (194), Expect = 6e-16
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 16/204 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQ-DGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V        R +    A KKL+  R+ +  GE    NE  ++ + + + +V 
Sbjct: 8   LGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS 64

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           L  +  E ++ L LV   +N G L   ++    P ++    +  A +I  GL  LH    
Sbjct: 65  L-AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---R 120

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I++ D+KP+NILLDDY + RISD GLA  + + + + IR  + GT GY+APE  +N  
Sbjct: 121 ERIVYRDLKPENILLDDYGHIRISDLGLA--VEIPEGETIRGRV-GTVGYMAPEVVKNER 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T   D +  G L+ E+I  +  F
Sbjct: 178 YTFSPDWWGLGCLIYEMIEGKSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 79.6 bits (196), Expect = 8e-16
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 30/225 (13%)

Query: 514 KELEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNE 569
           K + E  D +++  +VG G++G V     L  RT    VA+KKL R FQ     K    E
Sbjct: 8   KTIWEVPDRYRDLKQVGSGAYGTVCSA--LDRRTGAK-VAIKKLYRPFQSELFAKRAYRE 64

Query: 570 VVVIGQTHHKNLVRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 623
           + ++    H+N++ LL         D   +  LV  F+  GT    L  + K S +    
Sbjct: 65  LRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQF 122

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
           + +Q+ +GL Y+H   +A IIH D+KP N+ +++    +I DFGLA+     Q+ +  T 
Sbjct: 123 LVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QTDSEMTG 174

Query: 684 IRGTKGYVAPE----WFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
              T+ Y APE    W      T  VD++S G ++ E+++ +  F
Sbjct: 175 YVVTRWYRAPEVILNWMH---YTQTVDIWSVGCIMAEMLTGKPLF 216

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKNL 581
           +G G++GIVY+       TS   VA+KK   V  D E++        E+ ++    H N+
Sbjct: 15  IGEGTYGIVYRA---RDTTSGEIVALKK---VRMDNERDGIPISSLREITLLLNLRHPNI 68

Query: 582 VRLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHED 638
           V L          +  LV E+     LAS L     P S +    +  Q+ RGL YLHE+
Sbjct: 69  VELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN 127

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-WFR 697
               IIH D+K  N+LL D    +I+DFGLA+   L       T    T  Y APE    
Sbjct: 128 F---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLG 182

Query: 698 NSTITAKVDVYSFGVLLLEII 718
            +T T  +D+++ G +L E++
Sbjct: 183 CTTYTTAIDMWAVGCILAELL 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 78.5 bits (193), Expect = 1e-15
 Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 52/302 (17%)

Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV------VIGQT 576
           +G G FG V      G+        T VAVK L       EK+  + +       +IG+ 
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK- 82

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------------- 623
            HKN++ LLG C +     ++ E+ + G L  +L     P      N             
Sbjct: 83  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141

Query: 624 ---IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
               A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 142 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 198

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 738
            T  R    ++APE   +   T + DV+SFGVLL EI +   S    + + E + +L + 
Sbjct: 199 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 258

Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
               +R +K  +             C  +L M+   C    PS RPT K++++ L+ ++ 
Sbjct: 259 ----HRMDKPSN-------------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301

Query: 799 VS 800
           ++
Sbjct: 302 LT 303

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 78.1 bits (193), Expect = 1e-15
 Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 38/228 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 579
           E++G G++G+VYK     T      VA+KK+ R+  + E E        E+ ++ + +H 
Sbjct: 5   EKIGEGTYGVVYKARDKLT---GEIVALKKI-RL--ETEDEGVPSTAIREISLLKELNHP 58

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI----AFQIARGLLYL 635
           N+VRLL          LV+EFL+   L  ++  +  P   L   +     +Q+ +G+ Y 
Sbjct: 59  NIVRLLDVVHSENKLYLVFEFLDL-DLKKYM--DSSPLTGLDPPLIKSYLYQLLQGIAYC 115

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG------TKG 689
           H   S +++H D+KPQN+L+D     +++DFGLA        +A    +R       T  
Sbjct: 116 H---SHRVLHRDLKPQNLLIDREGALKLADFGLA--------RAFGVPVRTYTHEVVTLW 164

Query: 690 YVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           Y APE    S   +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 YRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI 212

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 34/273 (12%)

Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K L +       KE  +E  V+       + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDCSAQ 642
           LG C     +L V + +  G L  ++  N     S +L  N   QIA+G+ YL E    +
Sbjct: 75  LGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWCVQIAKGMSYLEE---VR 129

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI- 701
           ++H D+  +N+L+    + +I+DFGLA+LL +++     T      G V  +W    +I 
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE-----TEYHADGGKVPIKWMALESIL 184

Query: 702 ----TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
               T + DV+S+GV + E++    +F  +            +D     ++ DL+E    
Sbjct: 185 HRRFTHQSDVWSYGVTVWELM----TFGAK-----------PYDGIPAREIPDLLEKGER 229

Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
                 C   + M+ + C   D   RP  ++++
Sbjct: 230 LPQPPICTIDVYMIMVKCWMIDSECRPRFRELV 262

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 78.7 bits (194), Expect = 1e-15
 Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 18/217 (8%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFK-NEVVVIGQTH 577
           NF   +G+GSFG     V+L  R  T    A+ + K D + QD + E    E  V+    
Sbjct: 3   NFLMVLGKGSFG----KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG 58

Query: 578 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 634
               +  L  C +  +RL  V E++N G L   +   G  K         A +IA GL +
Sbjct: 59  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEP--HAVFYAAEIAIGLFF 116

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  II+ D+K  N++LD   + +I+DFG+ K   +   K  RT   GT  Y+APE
Sbjct: 117 LH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKE-NIFGGKTTRTFC-GTPDYIAPE 171

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                     VD ++FGVLL E+++ +  FD E  +E
Sbjct: 172 IIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE 208

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V        R +    A K+L++     + GE    NE  ++ + + + +V 
Sbjct: 8   LGKGGFGEV---CACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVN 64

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           L  +  E ++ L LV   +N G L   ++    P +     +  A +I  GL  LH +  
Sbjct: 65  L-AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-- 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              ++ D+KP+NILLDDY + RISD GLA  + + + ++IR  + GT GY+APE   N  
Sbjct: 122 -NTVYRDLKPENILLDDYGHIRISDLGLA--VKIPEGESIRGRV-GTVGYMAPEVLNNQR 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T   D +  G L+ E+I  +  F
Sbjct: 178 YTLSPDYWGLGCLIYEMIEGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 35/220 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKN 580
           F++ +G G+FG V + +I        A A+K L +   ++  ++F  E+ V+ +  HH N
Sbjct: 6   FEDVIGEGNFGQVIRAMIKKDGLKMNA-AIKMLKEFASENDHRDFAGELEVLCKLGHHPN 64

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-------------- 626
           ++ LLG C+      +  E+   G L  FL    + S  L T+ AF              
Sbjct: 65  IINLLGACENRGYLYIAIEYAPYGNLLDFL----RKSRVLETDPAFAKEHGTASTLTSQQ 120

Query: 627 ------QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
                  +A G+ YL E    Q IH D+  +N+L+ +   ++I+DFGL++   +   K +
Sbjct: 121 LLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTM 177

Query: 681 -RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
            R  +R    ++A E    S  T K DV+SFGVLL EI+S
Sbjct: 178 GRLPVR----WMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 60/316 (18%)

Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKL-----DRVFQDGEKEFKNEVV-VIGQT 576
           +G G FG V +    G+  +    T  VAVK L     D+   D   E   E++ +IG+ 
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEM--ELMKLIGK- 76

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI------------ 624
            HKN++ LLG C +     ++ E+   G L  FL     P  +   +I            
Sbjct: 77  -HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135

Query: 625 ----AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
               A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 136 LVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK 192

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 738
            +  R    ++APE   +   T + DV+SFG+L+ EI +   S    I + E + +L + 
Sbjct: 193 TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG 252

Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV-- 796
               +R +K  +             C  +L M+   C    P+ RPT K++++ L+ V  
Sbjct: 253 ----HRMDKPSN-------------CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295

Query: 797 ------VEVSLPPNPY 806
                 +++S+P   Y
Sbjct: 296 AVSEEYLDLSMPFEQY 311

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 76.9 bits (189), Expect = 2e-15
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 29/212 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEF-KNEVVVIGQTHHKNLVRL 584
           +G GSFG +Y   +   ++ +    +K++D       EKE  K EV+++ +  H N+V  
Sbjct: 8   IGEGSFGKIY---LAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTF 64

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARGLLY 634
                E     +V E+ + G L   +        N +  + F          QI+ GL +
Sbjct: 65  FASFQENGRLFIVMEYCDGGDLMKRI--------NRQRGVLFSEDQILSWFVQISLGLKH 116

Query: 635 LHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +H+    +I+H DIK QNI L  +   A++ DFG+A+   LN S  +     GT  Y++P
Sbjct: 117 IHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIAR--QLNDSMELAYTCVGTPYYLSP 171

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           E  +N     K D++S G +L E+ + +  F+
Sbjct: 172 EICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 78.1 bits (192), Expect = 2e-15
 Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 30/271 (11%)

Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L + + +  G L  ++     N+   + L  N   QIA+G+ YL E    
Sbjct: 75  LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLEE---R 128

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL  ++ +      +    ++A E   +   
Sbjct: 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIY 188

Query: 702 TAKVDVYSFGVLLLEIISC-RKSFD-IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
           T + DV+S+GV + E+++   K +D I   E  +IL          EK + L +  +   
Sbjct: 189 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----------EKGERLPQPPI--- 235

Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
               C   + M+ + C   D   RP  ++++
Sbjct: 236 ----CTIDVYMIMVKCWMIDADSRPKFRELI 262

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 77.5 bits (190), Expect = 2e-15
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 9/194 (4%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G V+         +   VA+K+++   Q  ++   NE++V+ +  + N+V  
Sbjct: 25  EKIGQGASGTVFTA---IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNF 81

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH +   Q+I
Sbjct: 82  LDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAA-VCRECLQALEFLHAN---QVI 137

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  N+LL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 195

Query: 705 VDVYSFGVLLLEII 718
           VD++S G++ +E++
Sbjct: 196 VDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 76.9 bits (189), Expect = 3e-15
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 14/178 (7%)

Query: 550 VAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNLVRLLGFCDEGQNR--LLVYEFLNNG 604
           VAVK L    + G     + K E+ ++   +H+N+V+  G C E       L+ EFL +G
Sbjct: 36  VAVKSLKP--ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 93

Query: 605 TLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
           +L  +L  N K   NL+     A QI +G+ YL    S Q +H D+  +N+L++  +  +
Sbjct: 94  SLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 149

Query: 663 ISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           I DFGL K +  ++    ++  +     + APE    S      DV+SFGV L E+++
Sbjct: 150 IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 28/213 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +++G GSFG   K +++ ++       +K+++  ++     +E + EV V+    H N+V
Sbjct: 6   KKIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIV 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARGL 632
           +     +E  N  +V ++   G L   +        N +  + F          QI   L
Sbjct: 63  QYQESFEENGNLYIVMDYCEGGDLYKKI--------NAQRGVLFPEDQILDWFVQICLAL 114

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++H+    +I+H DIK QNI L      ++ DFG+A++L  +  +  RT I GT  Y++
Sbjct: 115 KHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLN-STVELARTCI-GTPYYLS 169

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           PE   N     K D+++ G +L E+ + + +F+
Sbjct: 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 77.1 bits (190), Expect = 3e-15
 Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 23/226 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKE--FKNEVVVIGQTHHKNLV 582
           +G+GSFG   K ++   + +    A+K L  D V +D + E       V+     H  L 
Sbjct: 3   LGKGSFG---KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLT 59

Query: 583 RLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
            L  FC     ++   V E+LN G L   +  + +         A +I  GL +LH    
Sbjct: 60  HL--FCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLH---K 114

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             II+ D+K  N+LLD   + +I+DFG+ K     + KA  +   GT  Y+APE  +   
Sbjct: 115 KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA--STFCGTPDYIAPEILKGQK 172

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
               VD +SFGVLL E++  +  F  E  +E        FD   N+
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL-------FDSILND 211

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 77.0 bits (190), Expect = 4e-15
 Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 20/220 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEF-KNEVVVIGQT-HHKNL 581
           +G+GSFG     V+L     T    AV V K D + QD + E    E  V+     H  L
Sbjct: 3   LGKGSFG----KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL 58

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
            +L   C + ++RL  V E++N G L   +  + +         A +I  GL +LHE   
Sbjct: 59  TQLHS-CFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER-- 115

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             II+ D+K  N+LLD   + +I+DFG+ K   L       +   GT  Y+APE      
Sbjct: 116 -GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT--STFCGTPDYIAPEILSYQP 172

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTD 737
               VD ++ GVLL E+++ +  F+ +  E+    +IL D
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGD-DEDELFQSILED 211

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 16/204 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V        R +    A KKL++     + GE    NE  ++ + + + +V 
Sbjct: 8   LGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVS 64

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           L  +  E ++ L LV   +N G L   ++   +  +     +  A +I  GL  LH++  
Sbjct: 65  L-AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-- 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I++ D+KP+NILLDD+ + RISD GLA  +   Q+   R    GT GY+APE  +N  
Sbjct: 122 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNER 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T   D ++ G LL E+I+ +  F
Sbjct: 178 YTFSPDWWALGCLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G V+K   L  +     VA+K++ RV Q GE+        EV V+       H
Sbjct: 8   EIGEGAYGKVFKARDL--KNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 63

Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL   C     D      LV+E ++   L ++L    +P     T  ++ FQ+ RG
Sbjct: 64  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 122

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH   S +++H D+KPQNIL+      +++DFGLA++ +    +   T++  T  Y 
Sbjct: 123 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYR 176

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    S+    VD++S G +  E+   +  F
Sbjct: 177 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 209

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 44/298 (14%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVV------VIGQTHH 578
           +G G FG V     L         AV    ++ +D   EK+  + V       +IG+  H
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 80

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA------------- 625
           KN++ LLG C +     ++ E+ + G L  +L     P      +IA             
Sbjct: 81  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLV 140

Query: 626 ---FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
              +Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +         T
Sbjct: 141 SCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
             R    ++APE   +   T + DV+SFGVL+ EI +   S                +  
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS---------------PYPG 242

Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
              E+L  L++          C  +L M+   C    PS RPT K++++ L+ ++ ++
Sbjct: 243 IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 43/244 (17%)

Query: 523 FKEEVGRGSFGIVY----KGVILTTRTSTTA-------VAVKKL-DRVFQDGEKEFKNEV 570
            KE++G G FG V+    +G+                 VAVK L   V +    +F  E+
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL----------FGNLKPSWNL 620
            ++ +  + N++RLLG C       ++ E++ NG L  FL            N  PS ++
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128

Query: 621 RT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN--- 675
                +A QIA G+ YL    S   +H D+  +N L+ ++Y  +I+DFG+++ L      
Sbjct: 129 ANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY 185

Query: 676 --QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 733
             Q +A+   IR    ++A E       T   DV++FGV L E+ +  K       + Y+
Sbjct: 186 RIQGRAV-LPIR----WMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE------QPYS 234

Query: 734 ILTD 737
           +L+D
Sbjct: 235 LLSD 238

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 75.5 bits (185), Expect = 6e-15
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVR 583
           E VG G++G VYKG        T  +A  K+  V  D E+E K E+ ++ + +HH+N+  
Sbjct: 12  ELVGNGTYGQVYKG----RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 584 LLG-FCDEGQNRL-----LVYEFLNNGTLASFLF---GN-LKPSWNLRTNIAFQIARGLL 633
             G F  +    +     LV EF   G++   +    GN LK  W     I  +I RGL 
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--IAYICREILRGLS 125

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH+    ++IH DIK QN+LL +    ++ DFG++    L+++   R    GT  ++AP
Sbjct: 126 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA--QLDRTVGRRNTFIGTPYWMAP 180

Query: 694 EWFR-----NSTITAKVDVYSFGVLLLEI 717
           E        ++T   K D++S G+  +E+
Sbjct: 181 EVIACDENPDATYDFKSDLWSLGITAIEM 209

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 75.0 bits (184), Expect = 8e-15
 Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 29/289 (10%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVI 573
           EL+  +   +  +G G FG + +G +         VA+  L     D ++  F  E + +
Sbjct: 1   ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIAR 630
           GQ  H N+VRL G    G   ++V E+++NG L SFL    G L     +   +   +A 
Sbjct: 61  GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLM--GMLPGLAS 118

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG- 689
           G+ YL E      +H  +    +L++     +IS F     L  ++S+AI T + G    
Sbjct: 119 GMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFR---RLQEDKSEAIYTTMSGKSPV 172

Query: 690 -YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE  +    ++  DV+SFG+++ E++S  +    +M                 + +
Sbjct: 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS---------------GQDV 217

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              VE          C   L  + + C Q++   RP   ++  +L  +V
Sbjct: 218 IKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 75.0 bits (184), Expect = 1e-14
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 36/240 (15%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIG---QTHH 578
           E+G G++G VYK        S   VA+K + RV Q  E         EV ++       H
Sbjct: 7   EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-QTNEDGLPLSTVREVALLKRLEAFDH 61

Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL+  C     D      LV+E ++   L ++L     P     T  ++  Q  RG
Sbjct: 62  PNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRG 120

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH +C   I+H D+KP+NIL+      +++DFGLA++ +   +    T +  T  Y 
Sbjct: 121 LDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYR 174

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS-----CRKSFDIEMGEEYAIL-----TDWAFD 741
           APE    ST    VD++S G +  E+       C  S   ++G+ + ++      DW  D
Sbjct: 175 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 26/209 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G FG V +G  L    S   VAVK  K+    +   ++F +E V + +  H N++RL
Sbjct: 7   LGEGEFGSVMEG-QLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRL 65

Query: 585 LGFCDEGQNR------LLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAF--QIARGL 632
           +G C +          +++  F+ +G L SFL     G+       +  + F   IA G+
Sbjct: 66  IGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM 125

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL----TLNQSKAIRTAIRGTK 688
            YL    S   IH D+  +N +L++  N  ++DFGL+K +       Q +  +  ++   
Sbjct: 126 EYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVK--- 179

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEI 717
            ++A E   +   T K DV+SFGV + EI
Sbjct: 180 -WIAIESLADRVYTTKSDVWSFGVTMWEI 207

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 27/209 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVR 583
           E VG G++G VYKG        T  +A  K+  V +D E+E K E+ ++ + +HH+N+  
Sbjct: 22  EVVGNGTYGQVYKG----RHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77

Query: 584 LLG-FCDE---GQNR--LLVYEFLNNGTLASFLF---GN-LKPSWNLRTNIAFQIARGLL 633
             G F  +   G +    LV EF   G++   +    GN LK  W     I  +I RGL 
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDW--IAYICREILRGLA 135

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH   + ++IH DIK QN+LL +    ++ DFG++    L+++   R    GT  ++AP
Sbjct: 136 HLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSA--QLDRTVGRRNTFIGTPYWMAP 190

Query: 694 EWFR-----NSTITAKVDVYSFGVLLLEI 717
           E        ++T   + D++S G+  +E+
Sbjct: 191 EVIACDENPDATYDYRSDIWSLGITAIEM 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 35/216 (16%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQT-HHKNLVRL 584
           +G G+FG V K  I        A A+K++ +   +D  ++F  E+ V+ +  HH N++ L
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDA-AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF------------------ 626
           LG C+      L  E+  +G L  FL    + S  L T+ AF                  
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHF 117

Query: 627 --QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-RTA 683
              +ARG+ YL +    Q IH D+  +NIL+ + Y A+I+DFGL++   +   K + R  
Sbjct: 118 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 174

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +R    ++A E    S  T   DV+S+GVLL EI+S
Sbjct: 175 VR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 28/222 (12%)

Query: 514 KELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV 571
           + L + TD ++  E +G+G++G VYK   +T +   +  AVK LD +  D ++E + E  
Sbjct: 15  ESLGDPTDTWEIIETIGKGTYGKVYK---VTNKKDGSLAAVKILDPI-SDVDEEIEAEYN 70

Query: 572 VIGQ-THHKNLVRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--- 621
           ++    +H N+V+  G          GQ   LV E  N G++   + G L     L    
Sbjct: 71  ILQSLPNHPNVVKFYGMFYKADKLVGGQ-LWLVLELCNGGSVTELVKGLLICGQRLDEAM 129

Query: 622 -TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
            + I +    GL +LH +   +IIH D+K  NILL      ++ DFG++  LT   ++  
Sbjct: 130 ISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT--STRLR 184

Query: 681 RTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEI 717
           R    GT  ++APE        + +  A+ DV+S G+  +E+
Sbjct: 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 75.1 bits (185), Expect = 2e-14
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 30/223 (13%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTHHK 579
           E+G+G++GIV         +    VA+KK+  VF          +E K   ++     HK
Sbjct: 7   ELGQGAYGIVCS-ARNAETSEEETVAIKKITNVFSKKILAKRALRELK---LLRHFRGHK 62

Query: 580 NLVRL--LGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           N+  L  +     G  N L +YE L    L   +      +     +  +QI  GL Y+H
Sbjct: 63  NITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH 122

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              SA ++H D+KP N+L++     +I DFGLA+  + N  +           YVA  W+
Sbjct: 123 ---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGF----MTEYVATRWY 175

Query: 697 R-------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 732
           R         + T  +DV+S G +L E++  +  F    G++Y
Sbjct: 176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVF---KGKDY 215

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 75.5 bits (185), Expect = 2e-14
 Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 44/239 (18%)

Query: 509 PCFSYKELE----EATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL     E  + ++    VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 1   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 57

Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 58  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 113

Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA+  
Sbjct: 114 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 168

Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
                    T    T GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 169 --------HTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 75.2 bits (185), Expect = 2e-14
 Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 14/205 (6%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG+V+    +T       VA+KK+  VFQ+    K    E+ ++    H N++  
Sbjct: 8   IGYGAFGVVWS---VTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSA 64

Query: 585 LGFCDEGQ----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           L             + V   L    L   +      S +      +QI RGL YLH   S
Sbjct: 65  LDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH---S 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           A I+H DIKP N+L++     +I DFGLA++   ++SK   T    T+ Y APE    S 
Sbjct: 122 AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSR 180

Query: 701 -ITAKVDVYSFGVLLLEIISCRKSF 724
             T+ VD++S G +  E++  R  F
Sbjct: 181 HYTSAVDIWSVGCIFAELLGRRILF 205

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 74.7 bits (184), Expect = 2e-14
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 20/211 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKN 580
           E +G G++G+V   +     T +   VA+KK+   F      ++  + E+ ++    H N
Sbjct: 11  ENIGSGAYGVVCSAI----DTRSGKKVAIKKIPHAFDVPTLAKRTLR-ELKILRHFKHDN 65

Query: 581 LVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           ++ +         + ++  +V + L    L   +  +   +        +Q+ RGL Y+H
Sbjct: 66  IIAIRDILRPPGADFKDVYVVMD-LMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH 124

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTAIRGTKGYVAPE 694
              SA +IH D+KP N+L+++    RI DFG+A+ L+ + +  K   T    T+ Y APE
Sbjct: 125 ---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPE 181

Query: 695 -WFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                   T  +D++S G +  E++  R+ F
Sbjct: 182 LLLSLPEYTTAIDMWSVGCIFAEMLGRRQLF 212

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 16/204 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG V        R +    A KKL++     + GE    NE  ++ + + + +V 
Sbjct: 8   LGKGGFGEV---CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVS 64

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCS 640
           L  +  E ++ L LV   +N G L   ++    P ++ +  I  A ++  GL  L  +  
Sbjct: 65  L-AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-- 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I++ D+KP+NILLDD  + RISD GLA  + + + + +R  + GT GY+APE   N  
Sbjct: 122 -RIVYRDLKPENILLDDRGHIRISDLGLA--VQIPEGETVRGRV-GTVGYMAPEVINNEK 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T   D +  G L+ E+I  +  F
Sbjct: 178 YTFSPDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 74.0 bits (182), Expect = 3e-14
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 16/197 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL---DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           VG G+FG V+    +  R S    A+K +   + +    E+   NE  V+ +  H  ++R
Sbjct: 9   VGTGTFGRVHL---VRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIR 65

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     + +   ++ E++  G L S+L  + + S +     A +I   L YLH   S +I
Sbjct: 66  LFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLH---SKEI 122

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPEWFRNSTIT 702
           ++ D+KP+NILLD   + +++DFG AK L        RT  + GT  Y+APE  ++    
Sbjct: 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLR------DRTWTLCGTPEYLAPEVIQSKGHN 176

Query: 703 AKVDVYSFGVLLLEIIS 719
             VD ++ G+L+ E++ 
Sbjct: 177 KAVDWWALGILIYEMLV 193

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 73.2 bits (180), Expect = 4e-14
 Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHH-KNLV 582
           EE+GRG++G+V K   +    + T +AVK++       E K    ++ +  ++      V
Sbjct: 7   EELGRGAYGVVDK---MRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTV 63

Query: 583 RLLG---------FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
              G          C E  +  L  +F        +  G   P  ++   IA  I + L 
Sbjct: 64  TFYGALFREGDVWICMEVMDTSL-DKFYKK----VYDKGLTIPE-DILGKIAVSIVKALE 117

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           YLH   S  +IH D+KP N+L++     ++ DFG++  L  + +K I     G K Y+AP
Sbjct: 118 YLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA---GCKPYMAP 172

Query: 694 EWFRNSTITA----KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN--EK 747
           E             K DV+S G+ ++E+               A    + +D ++   ++
Sbjct: 173 ERINPELNQKGYDVKSDVWSLGITMIEL---------------ATGR-FPYDSWKTPFQQ 216

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
           L  +VE     L   K   +       C++++   RP   ++LQ 
Sbjct: 217 LKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 73.0 bits (179), Expect = 4e-14
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 29/212 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G FG V  G       S   V VK+L      D +  F  EV    + +H N+++
Sbjct: 1   DEIGNGWFGKVLLGEA-HRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQ 59

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHED 638
            LG C E    LLV EF   G L ++L  N          ++   +A ++A GLL+LH+ 
Sbjct: 60  CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ- 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA------IRGTKGYVA 692
             A  IH D+  +N  L    + +I D+GLA  L         T       +R    ++A
Sbjct: 119 --ADFIHSDLALRNCQLTADLSVKIGDYGLA--LEQYPEDYYITKDCHAVPLR----WLA 170

Query: 693 PEW-------FRNSTITAKVDVYSFGVLLLEI 717
           PE              T K +++S GV + E+
Sbjct: 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 73.3 bits (180), Expect = 5e-14
 Identities = 59/212 (27%), Positives = 112/212 (52%), Gaps = 20/212 (9%)

Query: 522 NFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQTHH 578
           NFK  E++G G++  VYKG     RT+   VA+K++    ++G       E+ ++ +  H
Sbjct: 1   NFKQLEKLGEGTYATVYKG---RNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH 57

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-----FGNLKPSWNLRTNIAFQIARGLL 633
           +N+VRL          +LV+E+++   L  ++      G L P  N   +  +Q+ +G+ 
Sbjct: 58  ENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDP--NTVKSFTYQLLKGIA 114

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           + HE+   +++H D+KPQN+L++     +++DFGLA+   +  +      +  T  Y AP
Sbjct: 115 FCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV--TLWYRAP 169

Query: 694 EWFRNS-TITAKVDVYSFGVLLLEIISCRKSF 724
           +    S T +  +D++S G ++ E+I+ R  F
Sbjct: 170 DVLLGSRTYSTSIDIWSVGCIMAEMITGRPLF 201

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 73.9 bits (181), Expect = 5e-14
 Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 20/218 (9%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 577
           NF   +G+GSFG     V+L  R  T    A+ + K D V QD + E    E  V+  + 
Sbjct: 3   NFLMVLGKGSFG----KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG 58

Query: 578 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 634
               +  L  C +  +RL  V E++N G L   +   G  K    +    A +IA GL +
Sbjct: 59  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVF--YAAEIAIGLFF 116

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAP 693
           LH   S  II+ D+K  N++LD   + +I+DFG+ K    N    + T    GT  Y+AP
Sbjct: 117 LH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---NMWDGVTTKTFCGTPDYIAP 170

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           E          VD ++FGVLL E+++ +  F+ E  +E
Sbjct: 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 74.9 bits (184), Expect = 6e-14
 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 22/174 (12%)

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           LL +H   S  +IH DIK  NILL      ++ DFG +K+     S  +     GT  YV
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYV 212

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           APE +R    + K D++S GVLL E+++ ++ FD E  EE                +   
Sbjct: 213 APEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV---------------MHKT 257

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM------LEGVVEV 799
           + G  + L      E   +V+   +  DP  RP+  K+L M      + G++E+
Sbjct: 258 LAGRYDPLPPSISPEMQEIVTA-LLSSDPKRRPSSSKLLNMPICKLFISGLLEI 310

Length = 496

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 72.6 bits (178), Expect = 6e-14
 Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           ++E +G G+ G VYK   L TR    AV V  LD +  + +K+  +E+ ++ +     ++
Sbjct: 5   YQEILGHGNGGTVYKAYHLLTR-RILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYII 62

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
              G F  E  NR+ +  EF++ G+L  +     K   ++   IA  + +GL YL    S
Sbjct: 63  GFYGAFFVE--NRISICTEFMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYL---WS 113

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I+H D+KP N+L++     ++ DFG++  L      +I     GT  Y+APE      
Sbjct: 114 LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV----NSIAKTYVGTNAYMAPERISGEQ 169

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
                DV+S G+  +E+   R  +      + +++      C        +V+ D   L 
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC--------IVDEDPPVLP 221

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
             +  EK V     C+++ P  RP  + ++
Sbjct: 222 VGQFSEKFVHFITQCMRKQPKERPAPENLM 251

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 72.6 bits (179), Expect = 7e-14
 Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 37/215 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--------EVVVIGQTHH 578
           +G G++ +VYK       T    VA+KK   +     KE K+        E+ ++ +  H
Sbjct: 8   LGEGTYAVVYKAR--DKETGRI-VAIKK---IKLGERKEAKDGINFTALREIKLLQELKH 61

Query: 579 KNLVRLLGFCDEGQNRLLVYEFL--------NNGTLASFLFGNLKPSWNLRTNIAFQIAR 630
            N++ LL       N  LV+EF+         + ++      ++K S+ L         R
Sbjct: 62  PNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSI-VLTPADIK-SYML------MTLR 113

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL YLH   S  I+H D+KP N+L+      +++DFGLA+  +        T    T+ Y
Sbjct: 114 GLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLAR--SFGSPNRKMTHQVVTRWY 168

Query: 691 VAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSF 724
            APE    +      VD++S G +  E++  R  F
Sbjct: 169 RAPELLFGARHYGVGVDMWSVGCIFAELLL-RVPF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 72.5 bits (178), Expect = 8e-14
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 24/203 (11%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLVR 583
           E+G G+FG VYK      + +    A K +    +  E+  +F  E+ ++ +  H N+V 
Sbjct: 12  ELGDGAFGKVYKAQ---HKETGLFAAAKIIQ--IESEEELEDFMVEIDILSECKHPNIVG 66

Query: 584 LL-GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDC 639
           L   +  E +  +L+ EF + G L S +    +        I +   Q+   L +LH   
Sbjct: 67  LYEAYFYENKLWILI-EFCDGGALDSIMLELERGL--TEPQIRYVCRQMLEALNFLHSH- 122

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP-----E 694
             ++IH D+K  NILL    + +++DFG++        K  R    GT  ++AP     E
Sbjct: 123 --KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK--RDTFIGTPYWMAPEVVACE 178

Query: 695 WFRNSTITAKVDVYSFGVLLLEI 717
            F+++    K D++S G+ L+E+
Sbjct: 179 TFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 71.6 bits (175), Expect = 1e-13
 Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 24/277 (8%)

Query: 522 NFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           NF+ E  +GRG F  VY+   L  R       V+  + +     ++   E+ ++ Q +H 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF--QIARGLLYL 635
           N+++ L    E     +V E  + G L+  +  F   K     RT   +  Q+   + ++
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S +++H DIKP N+ +      ++ D GL +  +   + A   ++ GT  Y++PE 
Sbjct: 123 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPER 177

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
              +    K D++S G LL E+ + +  F    G++  + +     C + E+       D
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPF---YGDKMNLFS----LCQKIEQC------D 224

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
              L      EKL  +   CI  DP  RP +  V Q+
Sbjct: 225 YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 72.0 bits (176), Expect = 1e-13
 Identities = 56/210 (26%), Positives = 108/210 (51%), Gaps = 26/210 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           +++G G++  V+KG    ++ +   VA+K++    ++G       EV ++    H N+V 
Sbjct: 11  DKLGEGTYATVFKG---RSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVT 67

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L       +   LV+E+L++  L  +L   GNL    N++    FQ+ RGL Y H+    
Sbjct: 68  LHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKI-FMFQLLRGLSYCHK---R 122

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---- 697
           +I+H D+KPQN+L+++    +++DFGLA+      +K++ T     +  V   W+R    
Sbjct: 123 KILHRDLKPQNLLINEKGELKLADFGLAR------AKSVPTKTYSNE--VVTLWYRPPDV 174

Query: 698 ---NSTITAKVDVYSFGVLLLEIISCRKSF 724
              ++  +  +D++  G +L E+ + R  F
Sbjct: 175 LLGSTEYSTPIDMWGVGCILYEMATGRPMF 204

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 25/203 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNL 581
           E++G G++G V+K      R +   VA+K++ R+  D E    +   E+ ++ +  HKN+
Sbjct: 6   EKIGEGTYGTVFKAK---NRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 61

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VRL       +   LV+E+ +      F   N      +  +  FQ+ +GL + H   S 
Sbjct: 62  VRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SH 118

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            ++H D+KPQN+L++     +++DFGLA        +A    +R     V   W+R   +
Sbjct: 119 NVLHRDLKPQNLLINKNGELKLADFGLA--------RAFGIPVRCYSAEVVTLWYRPPDV 170

Query: 702 -------TAKVDVYSFGVLLLEI 717
                  +  +D++S G +  E+
Sbjct: 171 LFGAKLYSTSIDMWSAGCIFAEL 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 71.9 bits (176), Expect = 1e-13
 Identities = 55/210 (26%), Positives = 108/210 (51%), Gaps = 26/210 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           E++G G++  V+KG    ++ +   VA+K++    ++G       EV ++    H N+V 
Sbjct: 12  EKLGEGTYATVFKG---RSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 68

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L       ++  LV+E+L+   L  ++   GN+    N++  + +QI RGL Y H     
Sbjct: 69  LHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFL-YQILRGLAYCHR---R 123

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---- 697
           +++H D+KPQN+L+++    +++DFGLA+      +K++ T     +  V   W+R    
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLAR------AKSVPTKTYSNE--VVTLWYRPPDV 175

Query: 698 ---NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +S  + ++D++  G +  E+ S R  F
Sbjct: 176 LLGSSEYSTQIDMWGVGCIFFEMASGRPLF 205

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 71.8 bits (176), Expect = 1e-13
 Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 50/288 (17%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHK 579
             +E+G+G++G VYK  +L   T  T +A+K++ R+  D E +F     E+ ++ +    
Sbjct: 5   VLDELGKGNYGSVYK--VLHRPTGVT-MAMKEI-RLELD-ESKFNQIIMELDILHKAVSP 59

Query: 580 NLVRLLG-FCDEGQNRLLVY---EFLNNGTLASFLFGNL----KPSWNLRTNIAFQIARG 631
            +V   G F  EG     VY   E+++ G+L     G +     P   LR  I + + +G
Sbjct: 60  YIVDFYGAFFIEGA----VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLR-RITYAVVKG 114

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +L E+    IIH D+KP N+L++     ++ DFG++  L  + +K   T I G + Y+
Sbjct: 115 LKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK---TNI-GCQSYM 168

Query: 692 APEWFR------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 745
           APE  +      N T T + DV+S G+ +LE+   R  +  E               Y N
Sbjct: 169 APERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET--------------YAN 214

Query: 746 --EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              +L  +V+GD   L      +    V+  C+ + P+ RPT  ++L+
Sbjct: 215 IFAQLSAIVDGDPPTLPSGYSDDAQDFVAK-CLNKIPNRRPTYAQLLE 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 35/219 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKN 580
           F   VG+GS+G V    ++  RT      +KKL+     +   K  + E  ++ Q  H N
Sbjct: 4   FVRVVGKGSYGEV---SLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPN 60

Query: 581 LVR--------------LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           +V               ++GFC+ G     +Y  L          G L P  N       
Sbjct: 61  IVAYRESWEGEDGLLYIVMGFCEGGD----LYHKLKEQK------GKLLPE-NQVVEWFV 109

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QIA  L YLHE     I+H D+K QN+ L      ++ D G+A++L  NQ     T I G
Sbjct: 110 QIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLE-NQCDMASTLI-G 164

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           T  Y++PE F N     K DV++ G  + E+ + + +F+
Sbjct: 165 TPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFN 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 72.2 bits (177), Expect = 2e-13
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 27/201 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRL 584
           VG G+FG+V        + +   VA+KK+ + F      K    E+ ++    H+N++ L
Sbjct: 18  VGMGAFGLVCSA---RDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISL 74

Query: 585 LG-FCDEGQNRLLVYEFLNNGT-LASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
              F    ++   V E L  GT L   L    L+  +       +QI RGL Y+H   SA
Sbjct: 75  SDIFISPLEDIYFVTELL--GTDLHRLLTSRPLEKQF--IQYFLYQILRGLKYVH---SA 127

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE----WFR 697
            ++H D+KP NIL+++  + +I DFGLA++    Q   + T    T+ Y APE    W +
Sbjct: 128 GVVHRDLKPSNILINENCDLKICDFGLARI----QDPQM-TGYVSTRYYRAPEIMLTWQK 182

Query: 698 NSTITAKVDVYSFGVLLLEII 718
                 +VD++S G +  E++
Sbjct: 183 YDV---EVDIWSAGCIFAEML 200

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 71.9 bits (177), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ-SKAIRTAI 684
           +QI RGL Y+H   SA ++H D+KP N+LL+   + +I DFGLA++           T  
Sbjct: 113 YQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEY 169

Query: 685 RGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSF 724
             T+ Y APE   NS   T  +D++S G +L E++S R  F
Sbjct: 170 VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLF 210

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 43/214 (20%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE------KEFKNEVVVIGQTHH 578
            ++G GS+G+V+K      R +   VA+KK    F + E      K    E+ ++ Q  H
Sbjct: 7   SKIGEGSYGVVFK---CRNRETGQIVAIKK----FVESEDDPVIKKIALREIRMLKQLKH 59

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLH 636
            NLV L+      +   LV+E+ ++ T+ + L  N +  P   ++  I +Q  + + + H
Sbjct: 60  PNLVNLIEVFRRKRKLHLVFEYCDH-TVLNELEKNPRGVPEHLIK-KIIWQTLQAVNFCH 117

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG----YVA 692
                  IH D+KP+NIL+      ++ DFG A++LT            G       YVA
Sbjct: 118 ---KHNCIHRDVKPENILITKQGQIKLCDFGFARILT------------GPGDDYTDYVA 162

Query: 693 PEWFR-------NSTITAKVDVYSFGVLLLEIIS 719
             W+R       ++     VDV++ G +  E+++
Sbjct: 163 TRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 71.2 bits (174), Expect = 3e-13
 Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 26/217 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           +++G G++  VYKG    ++ +   VA+K++    ++G       EV ++    H N+V 
Sbjct: 12  DKLGEGTYATVYKG---RSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 68

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L       ++  LV+E+L+   L  +L   GN     N++  + FQ+ RGL Y H     
Sbjct: 69  LHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFL-FQLLRGLNYCHRR--- 123

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+KPQN+L+++    +++DFGLA+      +K+I T     +  V   W+R   I
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYSNE--VVTLWYRPPDI 175

Query: 702 -------TAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                  + ++D++  G +  E+ + R  F     EE
Sbjct: 176 LLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 70.7 bits (173), Expect = 3e-13
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 44/290 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G+G FG V +  + +   S   VAVK  K D       +EF  E   + +  H N+++L
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66

Query: 585 LGFC--DEGQNRL----LVYEFLNNGTLASFLF----GNLKPSWNLRTNIAF--QIARGL 632
           +G       + RL    ++  F+ +G L +FL     G    +  L+T + F   IA G+
Sbjct: 67  IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL----TLNQSKAIRTAIRGTK 688
            YL    S   IH D+  +N +L++     ++DFGL+K +       Q  A +  ++   
Sbjct: 127 EYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVK--- 180

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNE 746
            ++A E   ++  T   DV++FGV + EI++  ++    +E  E Y  L        +  
Sbjct: 181 -WLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI-------KGN 232

Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
           +L    +          C+E +  +   C   +P  RP+ + +   LE +
Sbjct: 233 RLKQPPD----------CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 71.0 bits (174), Expect = 3e-13
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 27/205 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--------DRVFQDGEKEFKNEVVVIGQTHH 578
           +G+GSFG V+    +T   +    A+K L        DRV        K E  ++ + +H
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRV------RTKMERDILAEVNH 57

Query: 579 KNLVRL-LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLY 634
             +V+L   F  EG+   L+ +FL  G L + L    K       ++ F   ++A  L +
Sbjct: 58  PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDH 113

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  II+ D+KP+NILLD+  + +++DFGL+K    ++ KA   +  GT  Y+APE
Sbjct: 114 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY--SFCGTVEYMAPE 168

Query: 695 WFRNSTITAKVDVYSFGVLLLEIIS 719
                  T   D +SFGVL+ E+++
Sbjct: 169 VVNRRGHTQSADWWSFGVLMFEMLT 193

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 71.2 bits (174), Expect = 3e-13
 Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 18/219 (8%)

Query: 520 TDNFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQ 575
             NF   +G+GSFG     V+L  R  T    A+ + K D V QD + E    E  V+  
Sbjct: 1   DFNFLMVLGKGSFG----KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLAL 56

Query: 576 THHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGL 632
                 +  L  C +  +RL  V E++N G L   +   G  K    +    A +I+ GL
Sbjct: 57  QDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF--YAAEISVGL 114

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            +LH      II+ D+K  N++LD   + +I+DFG+ K   +      RT   GT  Y+A
Sbjct: 115 FFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMVDGVTTRTFC-GTPDYIA 169

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           PE          VD +++GVLL E+++ +  FD E  +E
Sbjct: 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 70.9 bits (174), Expect = 4e-13
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 27/205 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVR 583
           +GRG++GIV       T      VA+KK+   F    D ++  + E+ ++    H+N++ 
Sbjct: 13  IGRGAYGIVCSAKNSETNEK---VAIKKIANAFDNRIDAKRTLR-EIKLLRHLDHENVIA 68

Query: 584 LLGFCDEGQNR-----LLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLY 634
           +                +VYE ++       L   ++ S  L  +      +Q+ RGL Y
Sbjct: 69  IKDIMPPPHREAFNDVYIVYELMDTD-----LHQIIRSSQTLSDDHCQYFLYQLLRGLKY 123

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           +H   SA ++H D+KP N+LL+   + +I DFGLA+  T ++     T    T+ Y APE
Sbjct: 124 IH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR--TTSEKGDFMTEYVVTRWYRAPE 178

Query: 695 WFRNST-ITAKVDVYSFGVLLLEII 718
              N +  T  +DV+S G +  E++
Sbjct: 179 LLLNCSEYTTAIDVWSVGCIFAELL 203

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 70.5 bits (173), Expect = 4e-13
 Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 40/225 (17%)

Query: 511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKN 568
           F+ ++L++       E+GRG+FG V K   +  + S T +AVK++ R   D   +K    
Sbjct: 1   FTAEDLKD-----LGEIGRGAFGTVNK---MLHKPSGTIMAVKRI-RSTVDEKEQKRLLM 51

Query: 569 EV-VVIGQTHHKNLVRLLG---------FCDEGQNRLLVYEFLNNGTLASFLFGNLK--- 615
           ++ VV+  +    +V+  G          C E     L+   L+      +++  LK   
Sbjct: 52  DLDVVMRSSDCPYIVKFYGALFREGDCWICME-----LMDISLDK--FYKYVYEVLKSVI 104

Query: 616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
           P   +   IA    + L YL E+   +IIH D+KP NILLD   N ++ DFG++  L   
Sbjct: 105 PE-EILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL--- 158

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITA---KVDVYSFGVLLLEI 717
                +T   G + Y+APE    S       + DV+S G+ L E+
Sbjct: 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 69.6 bits (171), Expect = 5e-13
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 18/217 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDG-EKEFKNEVVVIGQTHHKNLVR 583
           +G G FG V     +  ++     A+K + +  + + G ++   +E  ++ + +H  +V+
Sbjct: 1   LGVGGFGRVEL---VKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVK 57

Query: 584 LL-GFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           L   F D+ +   ++ E+   G L + L   G     +  R  IA  +     YLH   +
Sbjct: 58  LYRTFKDK-KYIYMLMEYCLGGELWTILRDRGLF-DEYTARFYIA-CVVLAFEYLH---N 111

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             II+ D+KP+N+LLD     ++ DFG AK L   +S        GT  YVAPE   N  
Sbjct: 112 RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKL---KSGQKTWTFCGTPEYVAPEIILNKG 168

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
               VD +S G+LL E+++ R  F  +  +   I  D
Sbjct: 169 YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND 205

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 70.8 bits (173), Expect = 5e-13
 Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 38/215 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V        R     VAVKKL R FQ     +    E+ ++    H+N++ L
Sbjct: 23  VGSGAYGSVCSAYDTRLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGL 79

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTN----IAFQIARGLLYLH 636
           L       +     E  N   L + L G    N+     L       + +Q+ RGL Y+H
Sbjct: 80  LDVFTPATS----IENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIH 135

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              SA IIH D+KP N+ +++    RI DFGLA           R A     GYVA  W+
Sbjct: 136 ---SAGIIHRDLKPSNVAVNEDCELRILDFGLA-----------RQADDEMTGYVATRWY 181

Query: 697 RNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           R   I          VD++S G ++ E++  +  F
Sbjct: 182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 69.7 bits (171), Expect = 8e-13
 Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 42/239 (17%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK-LDRVFQDGEKEFK----NEVVVIGQT 576
               ++G G+FG VYK   + T      VA+KK L    +DG   F      E+ ++ + 
Sbjct: 11  EILGKLGEGTFGEVYKARQIKTGR---VVALKKILMHNEKDG---FPITALREIKILKKL 64

Query: 577 HHKNLVRLLGFC-----DEGQNRLLVY--EFLNNGTLASFLFGNLKPSWNLR----TNIA 625
            H N+V L+           + R  VY      +  L+  L  N  PS  L         
Sbjct: 65  KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLL-EN--PSVKLTESQIKCYM 121

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
            Q+  G+ YLHE     I+H DIK  NIL+D+    +I+DFGLA+               
Sbjct: 122 LQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGG 178

Query: 686 GTKGY---VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF----DIEMGE 730
           GT+ Y   V   W+R   +       T  VD++  G +  E+ + R       DI+   
Sbjct: 179 GTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 70.0 bits (171), Expect = 8e-13
 Identities = 90/337 (26%), Positives = 138/337 (40%), Gaps = 90/337 (26%)

Query: 527 VGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEV-VVIGQTHHKNLV 582
           +G G+FG V +     +  ++S   VAVK L       E K   +E+ ++I   +H N+V
Sbjct: 15  LGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVV 74

Query: 583 RLLGFCDEGQNRLLV-YEFLNNGTL----------------------------------- 606
            LLG C +    L+V  EF   G L                                   
Sbjct: 75  NLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVD 134

Query: 607 -------ASFLFGNLKPSWNLRTN--------------------IAFQIARGLLYLHEDC 639
                  AS LF   +PS +  TN                     +FQ+ARG+ +L    
Sbjct: 135 RRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL---A 191

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S + IH D+  +NILL +    +I DFGLA+ +  +     + + R    ++APE   + 
Sbjct: 192 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDK 251

Query: 700 TITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD-M 756
             T + DV+SFGVLL EI S   S    +++ EE+         C R      L +G  M
Sbjct: 252 VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF---------CQR------LKDGTRM 296

Query: 757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
            A  +       +M++ W  Q DP  RPT   ++++L
Sbjct: 297 RAPENATPEIYRIMLACW--QGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 69.6 bits (170), Expect = 1e-12
 Identities = 65/200 (32%), Positives = 91/200 (45%), Gaps = 8/200 (4%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V+   +  T       A+KK D V  D + E     + V+     H  L  L
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTHL 61

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                  +N   V E+LN G L   +    K      T  A +I  GL +LH   S  I+
Sbjct: 62  YCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLH---SKGIV 118

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           + D+K  NILLD   + +I+DFG+ K   L  +K       GT  Y+APE          
Sbjct: 119 YRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT--CTFCGTPDYIAPEILLGQKYNTS 176

Query: 705 VDVYSFGVLLLEIISCRKSF 724
           VD +SFGVLL E++  +  F
Sbjct: 177 VDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 70.1 bits (171), Expect = 1e-12
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV              VAVKKL R FQ+    K    E+V++   +HKN++ L
Sbjct: 29  IGSGAQGIVCAAF---DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL 85

Query: 585 LGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           L         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +LH  
Sbjct: 86  LNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH-- 140

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            SA IIH D+KP NI++      +I DFGLA+    N    + T    T+ Y APE    
Sbjct: 141 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILG 196

Query: 699 STITAKVDVYSFGVLLLEII 718
                 VD++S G ++ E++
Sbjct: 197 MGYKENVDIWSVGCIMGELV 216

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 24/277 (8%)

Query: 522 NFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           NF+ E  +GRG F  VY+   L          V+  D +      +   E+ ++ Q +H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF--QIARGLLYL 635
           N+++      E     +V E  + G L+  +  F   K     +T   +  Q+   L ++
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S +++H DIKP N+ +      ++ D GL +  +   + A   ++ GT  Y++PE 
Sbjct: 123 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPER 177

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
              +    K D++S G LL E+ + +  F  +    Y++       C + E+       D
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-------CKKIEQC------D 224

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
              L      E+L  +   CI  DP  RP +  V  +
Sbjct: 225 YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V   +   T      VA+KKL R FQ     K    E+ ++    H+N++ L
Sbjct: 23  VGSGAYGSVCSAIDKRTGEK---VAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGL 79

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGLLYLHED 638
           L   D   + +   EF +   +  ++  +L+       +      + +Q+  GL Y+H  
Sbjct: 80  L---DVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIH-- 134

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            SA IIH D+KP N+ +++    +I DFGLA           R A     GYV   W+R 
Sbjct: 135 -SAGIIHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYRA 182

Query: 699 STI-------TAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 732
             +          VD++S G ++ E+++ +  F    G++Y
Sbjct: 183 PEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDY 220

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 69.2 bits (169), Expect = 1e-12
 Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 75/320 (23%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTA-------------VAVKKL-DRVFQDGEKEFKN 568
           FKE++G G FG V+   ++  +   T              VAVK L     ++   +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLK 68

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--------------- 613
           EV ++ +    N++RLLG C +     ++ E++ NG L  FL  +               
Sbjct: 69  EVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP 128

Query: 614 ----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
                  S++   ++A QIA G+ YL    S   +H D+  +N L+ +    +I+DFG++
Sbjct: 129 AHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMS 185

Query: 670 KLLTLN-----QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
           + L        Q +A+   IR    ++A E       T   DV++FGV L EI+  C++ 
Sbjct: 186 RNLYAGDYYRIQGRAV-LPIR----WMAWECILMGKFTTASDVWAFGVTLWEILMLCKE- 239

Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK----------CVEKLVMVSI 773
                 + Y  LTD           + ++E   E   D            C + L  + +
Sbjct: 240 ------QPYGELTD-----------EQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELML 282

Query: 774 WCIQEDPSLRPTMKKVLQML 793
            C   D   RP+   +   L
Sbjct: 283 QCWSRDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 35/273 (12%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G GSFG VY     T   +   VAVKK+    +   +++++   EV  + Q  H N +
Sbjct: 28  EIGHGSFGAVY---FATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTI 84

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
              G   +     LV E+   G+ +  L  + KP   +    I     +GL YLH     
Sbjct: 85  EYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN-- 141

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
            +IH DIK  NILL +    +++DFG A   +   S        GT  ++APE       
Sbjct: 142 -MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS------FVGTPYWMAPEVILAMDE 194

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                KVDV+S G      I+C     IE+ E    L    F+      L  + + D   
Sbjct: 195 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNDSPT 239

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L   +  +       +C+Q+ P  RP   ++L+
Sbjct: 240 LQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI-GQTHHKNLVR 583
           E +G+G++G V+K  +L  +  + A AVK LD +  D ++E + E  ++   + H N+V+
Sbjct: 24  ETIGKGTYGKVFK--VLNKKNGSKA-AVKILDPI-HDIDEEIEAEYNILKALSDHPNVVK 79

Query: 584 LLGF-----CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIAR----GLLY 634
             G         G    LV E  N G++   + G LK    +   I   I      GL +
Sbjct: 80  FYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQH 139

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH +   + IH D+K  NILL      ++ DFG++  LT   ++  R    GT  ++APE
Sbjct: 140 LHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT--STRLRRNTSVGTPFWMAPE 194

Query: 695 WFR-----NSTITAKVDVYSFGVLLLEI 717
                   +ST  A+ DV+S G+  +E+
Sbjct: 195 VIACEQQLDSTYDARCDVWSLGITAIEL 222

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 69.0 bits (169), Expect = 2e-12
 Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 60/220 (27%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV       T      VA+KKL R FQ+    K    E+V++   +HKN++ L
Sbjct: 24  IGSGAQGIVCAAYDTVT---GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGL 80

Query: 585 LG-FC-----DEGQNRLLVYEF------------LNNGTLASFLFGNLKPSWNLRTNIAF 626
           L  F      +E Q+  LV E             L++  ++  L               +
Sbjct: 81  LNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLL---------------Y 125

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           Q+  G+ +LH   SA IIH D+KP NI++      +I DFGLA           RTA   
Sbjct: 126 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 171

Query: 687 --------TKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
                   T+ Y APE          VD++S G ++ E+I
Sbjct: 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 67.1 bits (164), Expect = 5e-12
 Identities = 66/288 (22%), Positives = 118/288 (40%), Gaps = 54/288 (18%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV----VIGQTHHKNL 581
           ++G G+ G V K         T  V  KK+  V    +   + +++    ++ +     +
Sbjct: 12  DLGAGNGGSVSK----VKHIPTGTVMAKKV--VHIGAKSSVRKQILRELQIMHECRSPYI 65

Query: 582 VRLLG-FCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           V   G F +E  N  +  EF++ G+L       G +     +   IA  +  GL YL+  
Sbjct: 66  VSFYGAFLNEN-NICMCMEFMDCGSLDRIYKKGGPIPV--EILGKIAVAVVEGLTYLYN- 121

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +I+H DIKP NIL++     ++ DFG++  L      +I     GT  Y++PE  + 
Sbjct: 122 -VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI----NSIADTFVGTSTYMSPERIQG 176

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
              T K DV+S G+ ++E+   +  F                    +   DD  +  M  
Sbjct: 177 GKYTVKSDVWSLGISIIELALGKFPFAF------------------SNIDDDGQDDPMGI 218

Query: 759 LNDIKCV--------------EKLVMVSIWCIQEDPSLRPTMKKVLQM 792
           L+ ++ +              E L      C+ +DP+ RPT +++  M
Sbjct: 219 LDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 66.9 bits (163), Expect = 5e-12
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +E+G G FG V  G +  +  +   V VK+L      Q+ + +F  E        H NL+
Sbjct: 1   KEIGNGWFGKVILGEV-NSGYTPAQVVVKELRVSASVQE-QMKFLEEAQPYRSLQHSNLL 58

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFG-----NLKPSWNLRTNIAFQIARGLLYLHE 637
           + LG C E    LLV EF   G L  +L        + P       +A +IA GLL+LH+
Sbjct: 59  QCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK 118

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
           +     IH D+  +N LL      +I D+GL+  
Sbjct: 119 N---NFIHSDLALRNCLLTADLTVKIGDYGLSHN 149

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 67.0 bits (163), Expect = 6e-12
 Identities = 55/204 (26%), Positives = 105/204 (51%), Gaps = 26/204 (12%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + +    A K ++   ++  +++  E+ ++   +H  +V+LL
Sbjct: 19  ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL 75

Query: 586 G-FCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           G F  +G+  +++ EF   G + + +     G  +P   +   I  Q+   L YLH   S
Sbjct: 76  GAFYWDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---ICRQMLEALQYLH---S 128

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLA--KLLTLNQSKAIRTAIRGTKGYVAP----- 693
            +IIH D+K  N+LL    + +++DFG++   + TL +    R +  GT  ++AP     
Sbjct: 129 MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR----RDSFIGTPYWMAPEVVMC 184

Query: 694 EWFRNSTITAKVDVYSFGVLLLEI 717
           E  +++    K D++S G+ L+E+
Sbjct: 185 ETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (163), Expect = 7e-12
 Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 19/219 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLVR 583
           +G+GSFG V +   +  R +    A+K + +       E  +   E  V+ Q +   +V 
Sbjct: 1   IGKGSFGKVMQ---VRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP 57

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSA 641
           L  F  +   +L LV  F+N G L    F +L+       + A F  A  L  L      
Sbjct: 58  L-KFSFQSPEKLYLVLAFINGGEL----FHHLQREGRFDLSRARFYTAELLCALENLHKF 112

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPEWFRNST 700
            +I+ D+KP+NILLD   +  + DFGL K   LN     +T    GT  Y+APE      
Sbjct: 113 NVIYRDLKPENILLDYQGHIALCDFGLCK---LNMKDDDKTNTFCGTPEYLAPELLLGHG 169

Query: 701 ITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEY-AILTD 737
            T  VD ++ GVLL E+++    F D  + E Y  IL +
Sbjct: 170 YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE 208

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 66.8 bits (163), Expect = 7e-12
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 16/218 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFK-NEVVVIGQTHHKNLVR 583
           +G+GSFG   K ++   + S    AVK  K D + QD + E    E  ++    +   + 
Sbjct: 3   LGKGSFG---KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 59

Query: 584 LLGFCDEGQNRLL-VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L  C +  +RL  V EF+N G L   +  + +         A +I   L++LH+     
Sbjct: 60  QLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHD---KG 116

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFRNSTI 701
           II+ D+K  N+LLD   + +++DFG+ K    N      T+   GT  Y+APE  +    
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN---GKTTSTFCGTPDYIAPEILQEMLY 173

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 737
              VD ++ GVLL E++     F+ E  ++   AIL D
Sbjct: 174 GPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 66.2 bits (161), Expect = 8e-12
 Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + +    A K +D   ++  +++  E+ ++    H N+V+LL
Sbjct: 12  ELGDGAFGKVYKA---QNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 68

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-QIARGLLYLHEDCSAQII 644
                  N  ++ EF   G + + +    +P    +  +   Q    L YLHE+   +II
Sbjct: 69  DAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KII 125

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF-----RNS 699
           H D+K  NIL     + +++DFG++   T    +  R +  GT  ++APE       ++ 
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDR 183

Query: 700 TITAKVDVYSFGVLLLEI 717
               K DV+S G+ L+E+
Sbjct: 184 PYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 15/203 (7%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           VG GSFG   + +++    S    A+K  +L +     E   K E V++ +  H N+V  
Sbjct: 8   VGEGSFG---RALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRK-EAVLLAKMKHPNIVAF 63

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
               +   +  +V E+ + G L   +    G L P  +       Q+  G+ ++HE    
Sbjct: 64  KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPE-DTILQWFVQMCLGVQHIHEK--- 119

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H DIK +NI L      ++ DFG A+LLT   + A      GT  YV PE + N   
Sbjct: 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYV--GTPYYVPPEIWENMPY 177

Query: 702 TAKVDVYSFGVLLLEIISCRKSF 724
             K D++S G +L E+ + +  F
Sbjct: 178 NNKSDIWSLGCILYELCTLKHPF 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 66.8 bits (163), Expect = 1e-11
 Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 48/215 (22%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--- 580
            E +G GSFG V    I   + +    A+K L           K E++ + Q  H     
Sbjct: 23  GETLGTGSFGRVR---IAKHKGTGEYYAIKCLK----------KREILKMKQVQHVAQEK 69

Query: 581 ----------LVRLL-GFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQ 627
                     +V ++  F DE  NR+  + EF+  G L    F +L+ +     ++A F 
Sbjct: 70  SILMELSHPFIVNMMCSFQDE--NRVYFLLEFVVGGEL----FTHLRKAGRFPNDVAKFY 123

Query: 628 IARGLL---YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-A 683
            A  +L   YLH   S  II+ D+KP+N+LLD+  + +++DFG AK +        RT  
Sbjct: 124 HAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP------DRTFT 174

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
           + GT  Y+APE  ++      VD ++ GVLL E I
Sbjct: 175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFI 209

Length = 329

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 66.6 bits (163), Expect = 1e-11
 Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 44/226 (19%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL---DRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V+    L     T  V A+K L   D + ++     + E  ++       +V
Sbjct: 9   IGRGAFGEVW----LVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIV 64

Query: 583 RLL-GFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +L   F DE ++  LV E++  G L + L                 F IA  +L L    
Sbjct: 65  KLYYSFQDE-EHLYLVMEYMPGGDLMNLLIRKDVFPEET-----ARFYIAELVLALDSVH 118

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLL--------------------------- 672
               IH DIKP NIL+D   + +++DFGL K +                           
Sbjct: 119 KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRR 178

Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
              Q +    +  GT  Y+APE  R +    + D +S GV+L E++
Sbjct: 179 DHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 8/200 (4%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V     L  +    AV   K D V  D + E     + V+     +  L  L
Sbjct: 3   LGKGSFGKVLLAE-LKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL 61

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                  ++   V EFLN G L   +    +      T  A +I  GL +LH   S  II
Sbjct: 62  YCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLH---SKGII 118

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           + D+K  N++LD   + +I+DFG+ K      ++A  +   GT  Y+APE  +    T  
Sbjct: 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA--STFCGTPDYIAPEILQGLKYTFS 176

Query: 705 VDVYSFGVLLLEIISCRKSF 724
           VD +SFGVLL E++  +  F
Sbjct: 177 VDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 30/212 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK--NEVVVIGQTHHKNLV 582
           E++G GS+  VYKG+   +R +   VA+K +    ++G   F    E  ++    H N+V
Sbjct: 11  EKLGEGSYATVYKGI---SRINGQLVALKVISMKTEEG-VPFTAIREASLLKGLKHANIV 66

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDC 639
            L       +    V+E+++   LA ++    G L P +N+R    FQ+ RGL Y+H   
Sbjct: 67  LLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHP-YNVRL-FMFQLLRGLAYIHGQ- 122

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR-- 697
              I+H D+KPQN+L+      +++DFGLA+      +K+I +    ++  V   W+R  
Sbjct: 123 --HILHRDLKPQNLLISYLGELKLADFGLAR------AKSIPSQTYSSE--VVTLWYRPP 172

Query: 698 -----NSTITAKVDVYSFGVLLLEIISCRKSF 724
                 +  ++ +D++  G + +E++  + +F
Sbjct: 173 DVLLGATDYSSALDIWGAGCIFIEMLQGQPAF 204

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 82/321 (25%)

Query: 523 FKEEVGRGSFGIVY----KGV---------ILTTRTSTTAVAVKKL-DRVFQDGEKEFKN 568
           FKE++G G FG V+    +G+         +  +      VAVK L +   ++   +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------------------ 610
           E+ ++ +    N++RLL  C       ++ E++ NG L  FL                  
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128

Query: 611 FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           +  L         +A QIA G+ YL    S   +H D+  +N L+   Y  +I+DFG+++
Sbjct: 129 YSTLI-------FMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSR 178

Query: 671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-----TAKVDVYSFGVLLLEIIS-CRKSF 724
               N        I+G +  +   W    +I     T   DV++FGV L EI++ C++  
Sbjct: 179 ----NLYSGDYYRIQG-RAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE-- 231

Query: 725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK----------CVEKLVMVSIW 774
                + Y+ L+D           + ++E   E   D            C + L  + + 
Sbjct: 232 -----QPYSQLSD-----------EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLS 275

Query: 775 CIQEDPSLRPTMKKV-LQMLE 794
           C + +   RP+ +++   +LE
Sbjct: 276 CWRRNAKERPSFQEIHATLLE 296

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 525 EEVGRGSFGIVYKG----VILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           E +G+G+F  ++KG    V        T V +K LD+  ++  + F     ++ Q  HK+
Sbjct: 1   ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH 60

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHE 637
           LV   G C  G   ++V E++  G+L ++L  N   +  SW L   +A Q+A  L +L +
Sbjct: 61  LVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLE--VAKQLAWALHFLED 118

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEW 695
                + H ++  +N+LL    + +  +    KL     S  +  +  +     +V PE 
Sbjct: 119 K---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPEC 175

Query: 696 FRNS-TITAKVDVYSFGVLLLEIIS 719
             N   ++   D +SFG  L EI S
Sbjct: 176 IENPQNLSLAADKWSFGTTLWEIFS 200

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 67.0 bits (163), Expect = 2e-11
 Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 48/216 (22%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+ + + T   +  VA+KK   V QD   ++KN E++++   +H N++ L 
Sbjct: 74  IGNGSFGVVYEAICIDT---SEKVAIKK---VLQD--PQYKNRELLIMKNLNHINIIFLK 125

Query: 585 --------------------LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 624
                               + F  +  ++ + +   NN  L  FL              
Sbjct: 126 DYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLV----------KLY 175

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTA 683
           ++Q+ R L Y+H   S  I H D+KPQN+L+D + +  ++ DFG AK L   Q       
Sbjct: 176 SYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYIC 232

Query: 684 IRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEII 718
            R    Y APE    +T  T  +D++S G ++ E+I
Sbjct: 233 SR---FYRAPELMLGATNYTTHIDLWSLGCIIAEMI 265

Length = 440

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 26/205 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV----VIGQTHH-K 579
            E+G G+ G VYK   +  + +   +AVK++ R    G KE    ++    V+ ++H   
Sbjct: 21  GEIGSGTCGQVYK---MRFKKTGHVMAVKQMRRT---GNKEENKRILMDLDVVLKSHDCP 74

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK---PSWNLRTNIAFQIARGLLYLH 636
            +V+  G+     +  +  E +   T    L   ++   P  ++   +   I + L YL 
Sbjct: 75  YIVKCYGYFITDSDVFICMELM--STCLDKLLKRIQGPIPE-DILGKMTVAIVKALHYLK 131

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
           E     +IH D+KP NILLD   N ++ DFG++  L    SKA +T   G   Y+APE  
Sbjct: 132 E--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV--DSKA-KTRSAGCAAYMAPERI 186

Query: 697 ----RNSTITAKVDVYSFGVLLLEI 717
                N     + DV+S G+ L+E+
Sbjct: 187 DPPDPNPKYDIRADVWSLGISLVEL 211

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 65.6 bits (160), Expect = 2e-11
 Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 16/199 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKLDRVFQDGEKEFKNEV----VVIGQTHHKNL 581
           +G+GSFG V     L    +     AVK L +     +KE K+ +    V++    H  L
Sbjct: 3   IGKGSFGKVL----LAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL 58

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           V L  +  +  ++L  V +++N G L   L              A +IA  L YLH   S
Sbjct: 59  VGL-HYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLH---S 114

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             II+ D+KP+NILLD   +  ++DFGL K   +  SK   T   GT  Y+APE  R   
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGIEHSKTTSTFC-GTPEYLAPEVLRKQP 172

Query: 701 ITAKVDVYSFGVLLLEIIS 719
               VD +  G +L E++ 
Sbjct: 173 YDRTVDWWCLGAVLYEMLY 191

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 64.7 bits (157), Expect = 3e-11
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 14/201 (6%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQTHHKNLVR 583
           +G+G+FG VY    + T     A  V+  D    +  KE    + E+ ++    H+ +V+
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQ-FDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 584 LLG-FCDEGQNRLLVY-EFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
             G   D  +  L ++ E++  G++   L  +G L  S  +      QI  G+ YLH   
Sbjct: 69  YYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTES--VTRKYTRQILEGMSYLH--- 123

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
           S  I+H DIK  NIL D   N ++ DFG +K L T+  S     ++ GT  +++PE    
Sbjct: 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG 183

Query: 699 STITAKVDVYSFGVLLLEIIS 719
                K DV+S G  ++E+++
Sbjct: 184 EGYGRKADVWSLGCTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 10/119 (8%)

Query: 40  TNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRG 99
           ++  T +S +  F  GF                I Y +   +TVVW   N+D NP V   
Sbjct: 5   SSGQTLVSGNSLFELGFF-----TLIMQNDYNLILYKSSS-RTVVWVA-NRD-NP-VSDS 55

Query: 100 SQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSN 157
             + L +D  LVL D  G+ VWSS         V  + D GN V+  S  + LW SF  
Sbjct: 56  CTLTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114

Length = 114

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 65.1 bits (158), Expect = 3e-11
 Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 18/206 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK--NEVVVIGQTHHKNLV 582
           E++G GS+  VYKG    ++ +   VA+K + R+ ++    F    E  ++    H N+V
Sbjct: 11  EKLGEGSYATVYKG---KSKVNGKLVALKVI-RLQEEEGTPFTAIREASLLKGLKHANIV 66

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDC 639
            L       +   LV+E+++   L  ++    G L P  N++  + FQ+ RGL Y+H+  
Sbjct: 67  LLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPE-NVKLFL-FQLLRGLSYIHQ-- 121

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I+H D+KPQN+L+ D    +++DFGLA+  ++         +  T  Y  P+    S
Sbjct: 122 -RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV--TLWYRPPDVLLGS 178

Query: 700 T-ITAKVDVYSFGVLLLEIISCRKSF 724
           T  +  +D++  G + +E+I    +F
Sbjct: 179 TEYSTCLDMWGVGCIFVEMIQGVAAF 204

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 65.3 bits (159), Expect = 4e-11
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+ARG+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 179 SFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 235

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEF---------C 286

Query: 743 YRNEKLDDLVEGD-MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG  M A          +M+  W    +P  RPT  +++++L  +++ +
Sbjct: 287 RR------LKEGTRMRAPEYATPEIYSIMLDCW--HNNPEDRPTFSELVEILGDLLQEN 337

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 20/204 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKE---FKNEVVVIGQTHHKNL 581
           +GRG+FG VY   +     +   +AVK++  D   Q+  KE    + E+ ++    H  +
Sbjct: 10  LGRGAFGEVY---LCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI 66

Query: 582 VRLLGFC--DEGQNRLLVY-EFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLH 636
           V+  G C  D  + +L ++ E++  G++   L  +G L  + N+      QI +G+ YLH
Sbjct: 67  VQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGAL--TENVTRRYTRQILQGVSYLH 123

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I+H DIK  NIL D   N ++ DFG +K + T+  S     ++ GT  +++PE 
Sbjct: 124 ---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV 180

Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                   K DV+S    ++E+++
Sbjct: 181 ISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.4 bits (157), Expect = 5e-11
 Identities = 79/273 (28%), Positives = 116/273 (42%), Gaps = 35/273 (12%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEK--EFKNEVVVIGQTHHKNLV 582
           E+G GSFG VY       RT+   VA+KK+     Q  EK  +   EV  + Q  H N +
Sbjct: 22  EIGHGSFGAVYFAR--DVRTNEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTI 78

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
              G         LV E+   G+ +  L  + KP   +    I     +GL YLH   S 
Sbjct: 79  EYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SH 134

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
           + IH DIK  NILL +    +++DFG A L++   S        GT  ++APE       
Sbjct: 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS------FVGTPYWMAPEVILAMDE 188

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                KVDV+S G      I+C     IE+ E    L    F+      L  + + D   
Sbjct: 189 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNDSPT 233

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L+     +        C+Q+ P  RP+ +++L+
Sbjct: 234 LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score = 60.0 bits (146), Expect = 5e-11
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 18/133 (13%)

Query: 27  NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWY 86
           +  +  G TL +   S   L   G F    +  D            I Y     +TVVW 
Sbjct: 1   SNPLSSGQTLVSS-GSLFEL---GFFKLIMQSRD---------YNLILYKGSS-RTVVWV 46

Query: 87  TDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLAS 145
             N+D NP       + L +D  LV+ D  G  VWSS         V  + D GN VL  
Sbjct: 47  A-NRD-NP-SGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYD 103

Query: 146 SSSSKLWDSFSNP 158
           S  + LW SF  P
Sbjct: 104 SDGNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 64.1 bits (156), Expect = 6e-11
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 28/216 (12%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQ 575
           D ++  E++G G++G VYK     T      VA+KK  R+  D E        E+ ++  
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNT---GKLVALKK-TRLEMDEEGIPPTALREISLLQM 56

Query: 576 THHKN-LVRLLGF----CDEGQNRL-LVYEFLNNGTLASFLFGNLK-PSWNLRTNIA--- 625
                 +VRLL         G+  L LV+E+L++  L  F+  N + P   L        
Sbjct: 57  LSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSF 115

Query: 626 -FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRTA 683
            +Q+ +G+ + H      ++H D+KPQN+L+D      +I+D GL +  ++         
Sbjct: 116 MYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEI 172

Query: 684 IRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEII 718
           +  T  Y APE    ST  +  VD++S G +  E+ 
Sbjct: 173 V--TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 64.7 bits (157), Expect = 6e-11
 Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 26/203 (12%)

Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 25  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78

Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 79  ISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 135

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 189

Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E++
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 63.9 bits (155), Expect = 8e-11
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 20/208 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q  +   +  L
Sbjct: 3   IGRGSYAKVLL-VRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 61

Query: 586 GFCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C + ++RL  V E++N G L   +    K P  + R   A +I+  L YLHE     I
Sbjct: 62  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 117

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWFRN 698
           I+ D+K  N+LLD   + +++D+G+ K       + +R     +   GT  Y+APE  R 
Sbjct: 118 IYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSTFCGTPNYIAPEILRG 170

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDI 726
                 VD ++ GVL+ E+++ R  FDI
Sbjct: 171 EDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 63.9 bits (155), Expect = 8e-11
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 21/178 (11%)

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 185 SFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 292

Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 293 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 343

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 18/205 (8%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKE---FKNEVVVIGQTHHKNL 581
           +G+G+FG VY   +     +   +AVK++  D    +  KE    + E+ ++    H+ +
Sbjct: 10  LGQGAFGRVY---LCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERI 66

Query: 582 VRLLGFCDEGQNRLL--VYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHE 637
           V+  G   +   R L    E +  G++   L  +G L  + N+      QI  G+ YLH 
Sbjct: 67  VQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGAL--TENVTRKYTRQILEGVSYLH- 123

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEWF 696
             S  I+H DIK  NIL D   N ++ DFG +K L T+  S     ++ GT  +++PE  
Sbjct: 124 --SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI 181

Query: 697 RNSTITAKVDVYSFGVLLLEIISCR 721
                  K D++S G  ++E+++ +
Sbjct: 182 SGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 20/208 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q      +  L
Sbjct: 3   IGRGSYAKVLL-VRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 586 GFCDEGQNRL-LVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C +  +RL LV E++N G L   +    K P  + R   A +I   L +LHE     I
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAA-EICIALNFLHE---RGI 117

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWFRN 698
           I+ D+K  N+LLD   + +++D+G+ K       + +      +   GT  Y+APE  R 
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCK-------EGLGPGDTTSTFCGTPNYIAPEILRG 170

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDI 726
                 VD ++ GVL+ E+++ R  FDI
Sbjct: 171 EEYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 63.4 bits (154), Expect = 2e-10
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 37/182 (20%)

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
           + ++Q+A+G+ +L    S   IH D+  +NILL      +I DFGLA+ +  + +  ++ 
Sbjct: 218 SFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS----------FDIEMGEEY 732
             R    ++APE   N   T + DV+S+G+LL EI S   S          F   + E Y
Sbjct: 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY 334

Query: 733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
            +L+    +C  +E  D                   +M S W    DP  RPT K+++Q+
Sbjct: 335 RMLSP---ECAPSEMYD-------------------IMKSCW--DADPLKRPTFKQIVQL 370

Query: 793 LE 794
           +E
Sbjct: 371 IE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 62.9 bits (153), Expect = 2e-10
 Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 20/220 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKE---FKNEVVVIGQTHHKN 580
           +G+GSFG     V+L     T    A+ V K D + QD + +    +  ++ +   H   
Sbjct: 3   LGKGSFG----KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--P 56

Query: 581 LVRLLGFCDEGQNRLL-VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
            +  L  C + ++RL  V E++N G L   +  + K         A ++   L++LH   
Sbjct: 57  FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH- 115

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              +I+ D+K  NILLD   + +++DFG+ K   LN      T   GT  Y+APE  +  
Sbjct: 116 --GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--GVTTTTFCGTPDYIAPEILQEL 171

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 737
                VD ++ GVL+ E+++ +  F+ +  ++   +IL D
Sbjct: 172 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 38/228 (16%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FK----NEVVVIGQTHHKN 580
           ++G G++G VYK      + +   VA+KK   V  D EKE F      E+ ++ Q +H+N
Sbjct: 14  QIGEGTYGQVYKAR---DKDTGELVALKK---VRLDNEKEGFPITAIREIKILRQLNHRN 67

Query: 581 LVRL----------LGFCDEGQNRLLVYEFLNN---GTLASFLFGNLKPSWNLRTNIAF- 626
           +V L          L F  +     LV+E++++   G L S L       ++     +F 
Sbjct: 68  IVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLV-----HFSEDHIKSFM 122

Query: 627 -QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
            Q+  GL Y H+      +H DIK  NILL++    +++DFGLA+L    +S+     + 
Sbjct: 123 KQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI 179

Query: 686 GTKGYVAPEWFR-NSTITAKVDVYSFGVLLLEIISCRKSF--DIEMGE 730
            T  Y  PE           +DV+S G +L E+ + +  F  + E+ +
Sbjct: 180 -TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ 226

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 37/220 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNL 581
           E +G+GS+G+V   +   T      VA+KK++ VF+   D  +  + E+ ++    H ++
Sbjct: 6   EVIGKGSYGVVCSAIDTHTGEK---VAIKKINDVFEHVSDATRILR-EIKLLRLLRHPDI 61

Query: 582 VRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGL 632
           V +          E ++  +V+E +      S L   +K + +L         +Q+ R L
Sbjct: 62  VEIKHIMLPPSRREFKDIYVVFELME-----SDLHQVIKANDDLTPEHHQFFLYQLLRAL 116

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+H   +A + H D+KP+NIL +     +I DFGLA++   +      TAI  T  YVA
Sbjct: 117 KYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP----TAIFWTD-YVA 168

Query: 693 PEWFRN--------STITAKVDVYSFGVLLLEIISCRKSF 724
             W+R         S  T  +D++S G +  E+++ +  F
Sbjct: 169 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 208

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 62.8 bits (152), Expect = 3e-10
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 26/203 (12%)

Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85

Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+  T   S  +   +  T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVV-TRYYRAPEV 196

Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 62.4 bits (151), Expect = 3e-10
 Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 517 EEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVI 573
           E   D+F+   E+G G+ G+V K   +  + S   +A K +    +     +   E+ V+
Sbjct: 1   ELKDDDFERISELGAGNGGVVTK---VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL 57

Query: 574 GQTHHKNLVRLLG-FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
            + +   +V   G F  +G+  + + E ++ G+L   L    +    +   ++  + RGL
Sbjct: 58  HECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGL 116

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL E    QI+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ Y++
Sbjct: 117 AYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMS 170

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEI 717
           PE  + +  + + D++S G+ L+E+
Sbjct: 171 PERLQGTHYSVQSDIWSMGLSLVEL 195

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 62.6 bits (152), Expect = 3e-10
 Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 21/172 (12%)

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           + Q+A+G+ +L    S   IH D+  +N+LL D   A+I DFGLA+ +  + +  ++   
Sbjct: 218 SSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 743
           R    ++APE   +   T + DV+S+G+LL EI S  KS        Y  IL +  F  Y
Sbjct: 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS-------PYPGILVNSKF--Y 325

Query: 744 RNEKLDDLVEGDMEALNDIKCVE-KLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           +  K      G   +  D    E   +M   W +  +P+ RPT  ++ Q+++
Sbjct: 326 KMVK-----RGYQMSRPDFAPPEIYSIMKMCWNL--EPTERPTFSQISQLIQ 370

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 61.9 bits (151), Expect = 3e-10
 Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 41/171 (23%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--------EVVVIGQTH 577
            +GRG++G VYK      +      A+KK       G+KE           E+ ++ +  
Sbjct: 7   CIGRGTYGRVYKAKRKNGKD-GKEYAIKKF-----KGDKEQYTGISQSACREIALLRELK 60

Query: 578 HKNLVRLLGFCDEGQNRL--LVYEFLNNGTLASF-LFGNLK----------PSWNLRTNI 624
           H+N+V L+    E  ++   L++++      A   L+  +K          P   ++ ++
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDY------AEHDLWQIIKFHRQAKRVSIPPSMVK-SL 113

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR----ISDFGLAKL 671
            +QI  G+ YLH +    ++H D+KP NIL+      R    I D GLA+L
Sbjct: 114 LWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           + VG G++G VYK   L T     AV + KL+    D     + E+ ++ +  H N+V  
Sbjct: 15  QRVGSGTYGDVYKARNLHT-GELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAY 71

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSA 641
            G     +   +  E+   G+L   ++    P   L+  IA+   +  +GL YLH   S 
Sbjct: 72  FGSYLSREKLWICMEYCGGGSLQD-IYHVTGPLSELQ--IAYVCRETLQGLAYLH---SK 125

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF---RN 698
             +H DIK  NILL D  + +++DFG+A  +T   +K  R +  GT  ++APE     +N
Sbjct: 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK--RKSFIGTPYWMAPEVAAVEKN 183

Query: 699 STITAKVDVYSFGVLLLEI 717
                  D+++ G+  +E+
Sbjct: 184 GGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 61.6 bits (150), Expect = 3e-10
 Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 44/228 (19%)

Query: 512 SYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK--NE 569
           +YK+L++        +G GS+  VYKG    ++ +   VA+K++ R+  +    F    E
Sbjct: 6   TYKKLDK--------LGEGSYATVYKGR---SKLTGQLVALKEI-RLEHEEGAPFTAIRE 53

Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAF 626
             ++    H N+V L       +   LV+E+L+   L  ++    G L    N+R    F
Sbjct: 54  ASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMH-NVRL-FLF 110

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           Q+ RGL Y H     +++H D+KPQN+L+ +    +++DFGLA+      +K++      
Sbjct: 111 QLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLAR------AKSVP----- 156

Query: 687 TKGY---VAPEWFR------NST-ITAKVDVYSFGVLLLEIISCRKSF 724
           +K Y   V   W+R       ST  +  +D++  G +  E+ + R  F
Sbjct: 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF 204

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 29/273 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLV 582
           + +G G++G VYK   + T     A+ V KL    + GE     + E++++    H N+V
Sbjct: 15  QRIGSGTYGDVYKARNVNT-GELAAIKVIKL----EPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
              G         +  EF   G+L          S +    ++ +  +GL YLH   S  
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLH---SKG 126

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF---RNS 699
            +H DIK  NILL D  + +++DFG++  +T   +K  R +  GT  ++APE     R  
Sbjct: 127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK--RKSFIGTPYWMAPEVAAVERKG 184

Query: 700 TITAKVDVYSFGVLLLEIISCRKS-FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                 D+++ G+  +E+   +   FD+       ++T   F   +  KL D     M+ 
Sbjct: 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNF---QPPKLKD----KMKW 237

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            N      K+ +       ++P  RPT +K+LQ
Sbjct: 238 SNSFHHFVKMALT------KNPKKRPTAEKLLQ 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 61.4 bits (149), Expect = 5e-10
 Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 24/210 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQ-THHKNLVR 583
           +GRGS+  V    +  TR       +KK   +  D E     + E  V    ++H  LV 
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKK--ELVNDDEDIDWVQTEKHVFETASNHPFLVG 60

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSA 641
           L   C + ++RL  V EF++ G L   +    K P  + R   A +I+  L +LHE    
Sbjct: 61  LHS-CFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSA-EISLALNFLHE---R 115

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWF 696
            II+ D+K  N+LLD   + +++D+G+ K       + IR     +   GT  Y+APE  
Sbjct: 116 GIIYRDLKLDNVLLDAEGHIKLTDYGMCK-------EGIRPGDTTSTFCGTPNYIAPEIL 168

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDI 726
           R       VD ++ GVL+ E+++ R  FDI
Sbjct: 169 RGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 60.4 bits (146), Expect = 7e-10
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 21/207 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 2   IGRGGFGEVYG-----CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 56

Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 57  PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMH-- 114

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 115 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 169

Query: 699 STI-TAKVDVYSFGVLLLEIISCRKSF 724
            T   +  D +S G +L +++     F
Sbjct: 170 GTAYDSSADWFSLGCMLFKLLRGHSPF 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 60.8 bits (147), Expect = 8e-10
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 20/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV----VVIGQTHHKNLV 582
           +G+GSFG   K ++   ++  +  AVK L +     +KE  + +    V++    H  LV
Sbjct: 3   IGKGSFG---KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLV 59

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHED 638
            L       +    V +++N G L    F +L+             A ++A  + YLH  
Sbjct: 60  GLHYSFQTAEKLYFVLDYVNGGEL----FFHLQRERCFLEPRARFYAAEVASAIGYLH-- 113

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S  II+ D+KP+NILLD   +  ++DFGL K     + +   +   GT  Y+APE  R 
Sbjct: 114 -SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV--EPEETTSTFCGTPEYLAPEVLRK 170

Query: 699 STITAKVDVYSFGVLLLEII 718
                 VD +  G +L E++
Sbjct: 171 EPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 60.8 bits (147), Expect = 9e-10
 Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 22/201 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV----VVIGQTHHKNLV 582
           +G+GSFG   K ++   +      AVK L +      KE K+ +    V++    H  LV
Sbjct: 3   IGKGSFG---KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLV 59

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----PSWNLRTNIAFQIARGLLYLHE 637
            L       +    V +F+N G L    F +L+     P    R   A +IA  L YLH 
Sbjct: 60  GLHYSFQTTEKLYFVLDFVNGGEL----FFHLQRERSFPEPRARFYAA-EIASALGYLH- 113

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             S  I++ D+KP+NILLD   +  ++DFGL K   + QS    T   GT  Y+APE  R
Sbjct: 114 --SINIVYRDLKPENILLDSQGHVVLTDFGLCK-EGIAQSDTT-TTFCGTPEYLAPEVIR 169

Query: 698 NSTITAKVDVYSFGVLLLEII 718
                  VD +  G +L E++
Sbjct: 170 KQPYDNTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 60.5 bits (146), Expect = 1e-09
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G GSFG VY       RT+   VA+KK+    +   +++++   EV  + +  H N +
Sbjct: 32  EIGHGSFGAVY--FARDVRTNEV-VAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSI 88

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
              G         LV E+   G+ +  L  + KP   +    I     +GL YLH   S 
Sbjct: 89  EYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SH 144

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
            +IH DIK  NILL +    +++DFG A + +   S        GT  ++APE       
Sbjct: 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS------FVGTPYWMAPEVILAMDE 198

Query: 699 STITAKVDVYSFGVLLLEI 717
                KVDV+S G+  +E+
Sbjct: 199 GQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 19/203 (9%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT--AVAVKKLDR---VFQDGEKEFKNEVVVIGQT 576
           NF   +G GSFG     VIL T  +     VA+K+ ++   + Q       +E  ++   
Sbjct: 33  NFIRTLGTGSFG----RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI 88

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           +H   V L G   +     LV EF+  G   +FL  N +   ++    A QI     YL 
Sbjct: 89  NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ 148

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPEW 695
              S  I++ D+KP+N+LLD     +++DFG AK++        RT  + GT  Y+APE 
Sbjct: 149 ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD------TRTYTLCGTPEYIAPEI 199

Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
             N       D ++ G+ + EI+
Sbjct: 200 LLNVGHGKAADWWTLGIFIYEIL 222

Length = 340

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 61.7 bits (150), Expect = 1e-09
 Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 40/230 (17%)

Query: 527 VGRGSFGIVYKG--VILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
           +G+G  G VY     + + R     VA+KK+     +     K F  E  +     H  +
Sbjct: 10  IGKGGMGEVYLAYDPVCSRR-----VALKKIREDLSENPLLKKRFLREAKIAADLIHPGI 64

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFG-----NLKPSWNLRTNI-AF-----QIAR 630
           V +   C +G        ++   TL S L       +L      +T++ AF     +I  
Sbjct: 65  VPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA 124

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ-------------- 676
            + Y+H   S  ++H D+KP NILL  +    I D+G A    L +              
Sbjct: 125 TIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNIC 181

Query: 677 --SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
             S  I   I GT  Y+APE       +   D+Y+ GV+L ++++    +
Sbjct: 182 YSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231

Length = 932

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 48/208 (23%), Positives = 107/208 (51%), Gaps = 20/208 (9%)

Query: 517 EEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV--- 571
           E   D+F++  E+G G+ G+V+K     +   +  +  +KL  +  + +   +N+++   
Sbjct: 1   ELKDDDFEKISELGAGNGGVVFK----VSHKPSGLIMARKL--IHLEIKPAIRNQIIREL 54

Query: 572 -VIGQTHHKNLVRLLG-FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
            V+ + +   +V   G F  +G+  + + E ++ G+L   L    +    +   ++  + 
Sbjct: 55  QVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 113

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ 
Sbjct: 114 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRS 167

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEI 717
           Y++PE  + +  + + D++S G+ L+E+
Sbjct: 168 YMSPERLQGTHYSVQSDIWSMGLSLVEM 195

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 59.9 bits (145), Expect = 2e-09
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQ 627
           E +++   +H +++R+      G    +V    ++  L ++L    +P   +    I  Q
Sbjct: 107 EAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQ 165

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           I  GL YLH   + +IIH D+K +NI ++D     I D G A+             + GT
Sbjct: 166 ILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQ---FPVVAPAFLGLAGT 219

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS-FDIE--MGEEYAI 734
               APE        +K D++S G++L E+++   + F+      EEY  
Sbjct: 220 VETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269

Length = 357

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 59.2 bits (144), Expect = 2e-09
 Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 17/198 (8%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQ-THHKNLVRLL 585
           G G+F  V K     +R +    A+K + + F+  E+     E+  + + + H N++RL+
Sbjct: 8   GEGTFSEVLKA---QSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLI 64

Query: 586 GFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRT-NIAFQIARGLLYLHEDCSAQ 642
               D    RL LV+E L +  L   + G  +P    R  +  +Q+ + L ++H +    
Sbjct: 65  EVLFDRKTGRLALVFE-LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---G 120

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-WFRNSTI 701
           I H DIKP+NIL+ D    +++DFG  + +    SK   T    T+ Y APE    +   
Sbjct: 121 IFHRDIKPENILIKD-DILKLADFGSCRGI---YSKPPYTEYISTRWYRAPECLLTDGYY 176

Query: 702 TAKVDVYSFGVLLLEIIS 719
             K+D+++ G +  EI+S
Sbjct: 177 GPKMDIWAVGCVFFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 59.7 bits (144), Expect = 2e-09
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + S    A+K L +   + +D       E  V+  T H  L  
Sbjct: 3   LGKGTFG---KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTS 59

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           L  +  + ++RL  V E++N G L   L      S +       +I   L YLH   S +
Sbjct: 60  L-KYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLH---SGK 115

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I++ D+K +N++LD   + +I+DFGL K   +  +  ++T   GT  Y+APE   ++   
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCK-EGITDAATMKTFC-GTPEYLAPEVLEDNDYG 173

Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 32/214 (14%)

Query: 525 EEVGRGSFGIVYKGVI-------LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           E +G+G+F  +YKGV+       +       +V +K L    +D    F     ++ Q  
Sbjct: 1   EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSL-AFFETASLMSQLS 59

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLY 634
           HK+LV+L G C   +N ++V E++  G L  FL     N+   W L  ++A Q+A  L Y
Sbjct: 60  HKHLVKLYGVCVRDEN-IMVEEYVKFGPLDVFLHREKNNVSLHWKL--DVAKQLASALHY 116

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYN-------ARISDFGLAKLLTLNQSKAIRTAIRGT 687
           L +    +++H ++  +NIL+  Y          ++SD G+   +   + +  R      
Sbjct: 117 LEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP---- 169

Query: 688 KGYVAPEWFRN--STITAKVDVYSFGVLLLEIIS 719
             ++APE  RN  +++T   D +SFG  LLEI S
Sbjct: 170 --WIAPECIRNGQASLTIAADKWSFGTTLLEICS 201

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 58.5 bits (142), Expect = 3e-09
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 26/159 (16%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FK----NEVVVIGQTHHKNL 581
           +G+G+FG V+K      + +   VA+KK   V  + EKE F      E+ ++    H+N+
Sbjct: 20  IGQGTFGEVFKA---RHKKTKQIVALKK---VLMENEKEGFPITALREIKILQLLKHENV 73

Query: 582 VRLLGFCD---EGQNR-----LLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARG 631
           V L+  C       NR      LV+EF  +  LA  L  N    + L     +   +  G
Sbjct: 74  VNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLL-SNKNVKFTLSEIKKVMKMLLNG 131

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           L Y+H     +I+H D+K  NIL+      +++DFGLA+
Sbjct: 132 LYYIH---RNKILHRDMKAANILITKDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 58.6 bits (142), Expect = 4e-09
 Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
           I+  + RGL YL E    +I+H D+KP NIL++     ++ DFG++  L    S A   +
Sbjct: 104 ISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMA--NS 157

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEI 717
             GT+ Y++PE  + +  T + D++S G+ L+E+
Sbjct: 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM 191

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 58.2 bits (141), Expect = 5e-09
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 18/200 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGE-KEFKNEVVVIGQTHHKNL 581
            +VG+G +G V+   +   + +   VA+K++ +  +F+  E +    E  ++  T  + L
Sbjct: 7   TQVGQGGYGQVF---LAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL 63

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCS 640
           V+LL    + +   L  E++  G   + L  NL     L  + A F +A     +     
Sbjct: 64  VKLLYAFQDDEYLYLAMEYVPGGDFRTLL-NNLG---VLSEDHARFYMAEMFEAVDALHE 119

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IH D+KP+N L+D   + +++DFGL+K ++T   S      + G+  Y+APE  R  
Sbjct: 120 LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS------VVGSPDYMAPEVLRGK 173

Query: 700 TITAKVDVYSFGVLLLEIIS 719
                VD +S G +L E + 
Sbjct: 174 GYDFTVDYWSLGCMLYEFLC 193

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 58.1 bits (140), Expect = 6e-09
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 20/199 (10%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G GSFG VY         ++  VA+KK+    +   +++++   EV  + +  H N +
Sbjct: 22  EIGHGSFGAVY---FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 78

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
           +  G         LV E+   G+ +  L  + KP   +    +     +GL YLH   S 
Sbjct: 79  QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 134

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
            +IH D+K  NILL +    ++ DFG A ++             GT  ++APE       
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDE 188

Query: 699 STITAKVDVYSFGVLLLEI 717
                KVDV+S G+  +E+
Sbjct: 189 GQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 58.3 bits (141), Expect = 6e-09
 Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 47/226 (20%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G GS G+V+  V          VAVKK+  V  D +  K    E+ +I +  H N+V++
Sbjct: 13  LGCGSNGLVFSAV---DSDCDKRVAVKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKV 67

Query: 585 LGFCDEGQNRL--------------LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIAR 630
                   + L              +V E++    LA+ L        + R    +Q+ R
Sbjct: 68  YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARL-FMYQLLR 125

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           GL Y+H   SA ++H D+KP N+ ++ +    +I DFGLA+++  + S          KG
Sbjct: 126 GLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH---------KG 173

Query: 690 Y----VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           Y    +  +W+R+  +       T  +D+++ G +  E+++ +  F
Sbjct: 174 YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLF 219

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 57.2 bits (139), Expect = 7e-09
 Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 24/163 (14%)

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            + N ++L       +  +L+ +++ +G L   L    K S      I  Q+   L  LH
Sbjct: 67  DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH 126

Query: 637 EDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLNQSKAIRTAIRGTKG------ 689
                 IIH DIK +N+L D       + D+GL K             I GT        
Sbjct: 127 ---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCK-------------IIGTPSCYDGTL 170

Query: 690 -YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
            Y +PE  +        D ++ GVL  E+++ +  F  +  EE
Sbjct: 171 DYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE 213

Length = 267

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 56.9 bits (137), Expect = 1e-08
 Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 24/166 (14%)

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           Q+  G+ Y+H+    +I+H D+K +NI L +    +I DFG+++LL    S  + T   G
Sbjct: 114 QLLLGVHYMHQ---RRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLM--GSCDLATTFTG 167

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
           T  Y++PE  ++    +K D++S G +L E+     +F     E    L+          
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAF-----EGQNFLS---------- 212

Query: 747 KLDDLVEGDMEALNDIKCVE-KLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +  +VEG   +L +    +   +M S+  + +DPSLRP+  ++L+
Sbjct: 213 VVLRIVEGPTPSLPETYSRQLNSIMQSM--LNKDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 57.0 bits (137), Expect = 2e-08
 Identities = 64/250 (25%), Positives = 98/250 (39%), Gaps = 45/250 (18%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE----FKNEVVVIGQTHHKNLV 582
           +GRG+FG V     L  +  T  V   K+ R     EKE     + E  ++ +     +V
Sbjct: 9   IGRGAFGEVR----LVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           ++     +  N  L+ EFL  G + + L   +K          F IA  +L +       
Sbjct: 65  KMFYSFQDKLNLYLIMEFLPGGDMMTLL---MKKDTLTEEETQFYIAETVLAIDSIHQLG 121

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLL-----------------------TLNQSKA 679
            IH DIKP N+LLD   + ++SDFGL   L                        +N  + 
Sbjct: 122 FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK 181

Query: 680 IRTAIR----------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
             T  R          GT  Y+APE F  +      D +S GV++ E++     F  E  
Sbjct: 182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241

Query: 730 EE-YAILTDW 738
           +E Y  + +W
Sbjct: 242 QETYKKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 56.5 bits (136), Expect = 2e-08
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 2   IGRGGFGEVYG-----CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 56

Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 57  PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMH-- 114

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 115 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 169

Query: 699 STI-TAKVDVYSFGVLLLEII 718
                +  D +S G +L +++
Sbjct: 170 GVAYDSSADWFSLGCMLFKLL 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 57.0 bits (138), Expect = 2e-08
 Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 61/239 (25%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE----FKNEVVVIGQTHHKNLV 582
           +GRG+FG V    ++  + +    A+KKL +  +  EKE     + E  ++ +  +  +V
Sbjct: 9   IGRGAFGEVR---LVQKKDTGHIYAMKKLRKS-EMLEKEQVAHVRAERDILAEADNPWVV 64

Query: 583 RLL-GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI------AFQIARGLLYL 635
           +L   F DE     L+ E+L  G + + L         ++ +        F IA  +L +
Sbjct: 65  KLYYSFQDE-NYLYLIMEYLPGGDMMTLL---------MKKDTFTEEETRFYIAETILAI 114

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL----------------------- 672
                   IH DIKP N+LLD   + ++SDFGL   L                       
Sbjct: 115 DSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDF 174

Query: 673 ---TLNQSKAIRTAIR----------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
               ++  +   T  R          GT  Y+APE F  +    + D +S GV++ E++
Sbjct: 175 ISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 20/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV----VVIGQTHHKNLV 582
           +G+GSFG   K ++   +      AVK L +     +KE K+ +    V++    H  LV
Sbjct: 3   IGKGSFG---KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 59

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHED 638
            L  F  +  ++L  V +++N G L   L      L+P        A +IA  L YLH  
Sbjct: 60  GL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLH-- 113

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S  I++ D+KP+NILLD   +  ++DFGL K     +     +   GT  Y+APE    
Sbjct: 114 -SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI--EHNGTTSTFCGTPEYLAPEVLHK 170

Query: 699 STITAKVDVYSFGVLLLEII 718
                 VD +  G +L E++
Sbjct: 171 QPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 56.3 bits (136), Expect = 2e-08
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 12/137 (8%)

Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           L+ +++N G L + L+   +   S  +R  IA +I   L +LH+     II+ DIK +NI
Sbjct: 82  LILDYVNGGELFTHLYQREHFTES-EVRVYIA-EIVLALDHLHQ---LGIIYRDIKLENI 136

Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPEWFRNSTI--TAKVDVYSF 710
           LLD   +  ++DFGL+K     + +  R  +  GT  Y+APE  R  +      VD +S 
Sbjct: 137 LLDSEGHVVLTDFGLSKEFLAEEEE--RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSL 194

Query: 711 GVLLLEIISCRKSFDIE 727
           GVL  E+++    F ++
Sbjct: 195 GVLTFELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 31/213 (14%)

Query: 525 EEVGRGSFGIVYKGVI---------LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ 575
           E +GRG+   +Y G++           +      V +K LD   +D    F     ++ Q
Sbjct: 1   EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQ 60

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGL 632
             HK++V L G C      ++V EF+  G L  F+      L   W     +A Q+A  L
Sbjct: 61  VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKF--KVAKQLASAL 118

Query: 633 LYLHEDCSAQIIHCDIKPQNILL-----DDYYNA--RISDFGLAKLLTLNQSKAIRTAIR 685
            YL ED    ++H ++  +NILL     D       ++SD G+   +   Q    R    
Sbjct: 119 SYL-ED--KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIP-- 173

Query: 686 GTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEI 717
               ++APE   +S  ++   D +SFG  L EI
Sbjct: 174 ----WIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 19/198 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKN----EVVVIGQTHHKN 580
           VG G++G+V K      + +   VA+KK    F+D E  +E K     E+ ++     +N
Sbjct: 9   VGEGAYGVVLK---CRHKETKEIVAIKK----FKDSEENEEVKETTLRELKMLRTLKQEN 61

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +V L           LV+E++    L       N  P   +R+ I +Q+ + + + H++ 
Sbjct: 62  IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYI-YQLIKAIHWCHKN- 119

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I+H DIKP+N+L+      ++ DFG A+ L+   S A  T    T+ Y +PE    +
Sbjct: 120 --DIVHRDIKPENLLISHNDVLKLCDFGFARNLS-EGSNANYTEYVATRWYRSPELLLGA 176

Query: 700 TITAKVDVYSFGVLLLEI 717
                VD++S G +L E+
Sbjct: 177 PYGKAVDMWSVGCILGEL 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 56.0 bits (135), Expect = 3e-08
 Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHH 578
           + K  VGRG FG V    ++  + +    A+K + +   + Q+    F+ E  ++  ++ 
Sbjct: 4   DVKSLVGRGHFGEVQ---VVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS 60

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHE 637
             + +L     +  N  LV E+   G L S L            ++A F +A  +L +H 
Sbjct: 61  PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ---FDEDMAQFYLAELVLAIHS 117

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
                 +H DIKP+N+L+D   + +++DFG A  LT N+         GT  Y+APE   
Sbjct: 118 VHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK-MVNSKLPVGTPDYIAPEVLT 176

Query: 698 ------NSTITAKVDVYSFGVLLLEIISCRKSF 724
                   T   + D +S GV+  E+I  R  F
Sbjct: 177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 41/230 (17%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAV----AVKKLDRVFQDGEKEFKNE---VVVIGQTHHKN 580
           GRG FG     V+L     T  +    A+KK D + +D  +    E           H  
Sbjct: 8   GRGHFG----KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF 63

Query: 581 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI---------AFQIAR 630
           LV L   C + ++ +  V E+   G L            ++ T++         A  +  
Sbjct: 64  LVNLFA-CFQTEDHVCFVMEYAAGGDLM----------MHIHTDVFSEPRAVFYAACVVL 112

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKG 689
           GL YLHE+   +I++ D+K  N+LLD     +I+DFGL K          RT+   GT  
Sbjct: 113 GLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCK---EGMGFGDRTSTFCGTPE 166

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 737
           ++APE    ++ T  VD +  GVL+ E++     F  +  EE   +I+ D
Sbjct: 167 FLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND 216

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 55.4 bits (133), Expect = 5e-08
 Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 21/202 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  ++S    A+K   K + + +     F  E  ++   +   +V+
Sbjct: 51  IGRGAFGEVQ---LVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 107

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSAQ 642
           L     + +   +V E++  G L      NL  ++++    A F  A  +L L    S  
Sbjct: 108 LFCAFQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 162

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFR--- 697
           +IH D+KP N+LLD + + +++DFG    + ++++  +R  TA+ GT  Y++PE  +   
Sbjct: 163 LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVRCDTAV-GTPDYISPEVLKSQG 219

Query: 698 -NSTITAKVDVYSFGVLLLEII 718
            +     + D +S GV L E++
Sbjct: 220 GDGYYGRECDWWSVGVFLFEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 13/202 (6%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 3   LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 59

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           L  +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 60  L-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 115

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K    +   A      GT  Y+APE   ++   
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYG 173

Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 55.4 bits (133), Expect = 7e-08
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 29/204 (14%)

Query: 595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQ-IARGLLY------LHEDCSAQIIHCD 647
           LL+ E+ + G L      N +    L+ ++ FQ    GLL+      L E  S +++H D
Sbjct: 141 LLIMEYGSGGDL------NKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRD 194

Query: 648 IKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDV 707
           +K  NI L      ++ DFG +K  + + S  + ++  GT  Y+APE +     + K D+
Sbjct: 195 LKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADM 254

Query: 708 YSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEK 767
           +S GV+L E+++  + F      E  I+    +  Y  +     V   M+AL D      
Sbjct: 255 WSLGVILYELLTLHRPFKGPSQRE--IMQQVLYGKY--DPFPCPVSSGMKALLDP----- 305

Query: 768 LVMVSIWCIQEDPSLRPTMKKVLQ 791
                   + ++P+LRPT +++L 
Sbjct: 306 -------LLSKNPALRPTTQQLLH 322

Length = 478

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 54.4 bits (131), Expect = 7e-08
 Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 28/235 (11%)

Query: 566 FKNEVVVIGQTHHKNLVRLLGF----CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR 621
            +NE+  + +    N++++ GF     D+     L+ E+   G L   L      S+  +
Sbjct: 65  TENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTK 124

Query: 622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
            ++A    +GL  L++  +    + ++   + L+ + Y  +I   GL K+L+    K + 
Sbjct: 125 LDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVN 182

Query: 682 TAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
             +     Y + +   +  S  T K D+YS GV+L EI + +  F+              
Sbjct: 183 FMV-----YFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE---NLTTK------ 228

Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                 E  D ++  +      + C  ++  +   C   D   RP +K++L  L 
Sbjct: 229 ------EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277

Length = 283

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.8 bits (132), Expect = 9e-08
 Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 7/106 (6%)

Query: 623 NIAFQIARGLL----YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
             A  I R LL    YLH      IIH D+K +NI LD+  NA + DFG A  L  +   
Sbjct: 185 EQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT 241

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                  GT    +PE        AK D++S G++L E+     + 
Sbjct: 242 PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 54.6 bits (131), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 6/105 (5%)

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           +I   L +LH+     I++ DIK +NILLD   +  ++DFGL+K   L++ K    +  G
Sbjct: 113 EIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF-LSEEKERTYSFCG 168

Query: 687 TKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGE 730
           T  Y+APE  R      K VD +S G+L+ E+++    F +E GE
Sbjct: 169 TIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE-GE 212

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 54.3 bits (130), Expect = 1e-07
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 47/258 (18%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE----FKNEVVVIG 574
           D+F+  + +GRG+FG V     L  +  T  +   K+ R     EKE     + E  ++ 
Sbjct: 1   DDFESLKVIGRGAFGEVR----LVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILV 56

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +     +V++     + +N  L+ EFL  G + + L   +K          F IA  +L 
Sbjct: 57  EADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLL---MKKDTLSEEATQFYIAETVLA 113

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL---------------------- 672
           +        IH DIKP N+LLD   + ++SDFGL   L                      
Sbjct: 114 IDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSF 173

Query: 673 -TLNQSKAIRT----------AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
             +N  +   T          +  GT  Y+APE F  +      D +S GV++ E++   
Sbjct: 174 QNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233

Query: 722 KSFDIEMGEE-YAILTDW 738
             F  E  +E Y  + +W
Sbjct: 234 PPFCSETPQETYRKVMNW 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 33/212 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 3   LGKGTFG---KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTA 59

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARGL 632
           L  +  +  +RL  V E+ N G L           ++L     F          +I   L
Sbjct: 60  L-KYSFQTHDRLCFVMEYANGGELF----------FHLSRERVFSEDRARFYGAEIVSAL 108

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YLH   S  +++ D+K +N++LD   + +I+DFGL K   ++    ++T   GT  Y+A
Sbjct: 109 GYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLA 163

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           PE   ++     VD +  GV++ E++  R  F
Sbjct: 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 38/222 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT---------- 576
           +G G++G V K     T T    VA+KK+  +  +   +   +  ++G            
Sbjct: 17  LGEGTYGKVEKA--YDTLTGKI-VAIKKVKII--EISNDVTKDRQLVGMCGIHFTTLREL 71

Query: 577 ------HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIAR 630
                  H+N++ L+    EG    LV + +    L   +   ++ + +    I  QI  
Sbjct: 72  KIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILN 130

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-----LLTLNQSKAIRTAIR 685
           GL  LH       +H D+ P NI ++     +I+DFGLA+       +   SK      R
Sbjct: 131 GLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRR 187

Query: 686 G-------TKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIIS 719
                   T  Y APE    +      VD++S G +  E+++
Sbjct: 188 EEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229

Length = 335

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 9/139 (6%)

Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           L+ +++N G L + L    +         + +I   L +LH+     II+ DIK +NILL
Sbjct: 82  LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILL 138

Query: 656 DDYYNARISDFGLAK-LLTLNQSKAIRTAIRGTKGYVAPEWFR--NSTITAKVDVYSFGV 712
           D   +  ++DFGL+K        +A   +  GT  Y+AP+  R  +      VD +S GV
Sbjct: 139 DSNGHVVLTDFGLSKEFHEDEVERAY--SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGV 196

Query: 713 LLLEIISCRKSFDIEMGEE 731
           L+ E+++    F ++ GE+
Sbjct: 197 LMYELLTGASPFTVD-GEK 214

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 53.0 bits (127), Expect = 3e-07
 Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 21/201 (10%)

Query: 527 VGRGSFGIVYK------GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           +G+G+FG VY+        I   +  +    V K +     GE+     ++V        
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERN----ILVRTLLDESP 56

Query: 581 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHED 638
            +  L F  +  + L LV ++++ G L    F +L+       + A F IA  +L L   
Sbjct: 57  FIVGLKFSFQTDSDLYLVTDYMSGGEL----FWHLQKEGRFSEDRAKFYIAELVLALEHL 112

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL-LTLNQSKAIRTAIRGTKGYVAPE-WF 696
               I++ D+KP+NILLD   +  + DFGL+K  LT N          GT  Y+APE   
Sbjct: 113 HKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN---KTTNTFCGTTEYLAPEVLL 169

Query: 697 RNSTITAKVDVYSFGVLLLEI 717
                T  VD +S GVL+ E+
Sbjct: 170 DEKGYTKHVDFWSLGVLVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 40/222 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH----HKN 580
           +E+G G FG V    I T  T    V VK+L        KE +NE +  G  +    H N
Sbjct: 1   QEIGNGWFGKVLLSEIYTD-TGVARVVVKELKA--NASSKE-QNEFLQQGDPYRILQHPN 56

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN-------IAFQIARGLL 633
           +++ LG C E    LLV+E+   G L S+L    +  W+ R +       +A +IA G+ 
Sbjct: 57  ILQCLGQCVEAIPYLLVFEYCELGDLKSYL---SQEQWHRRNSQLLLLQRMACEIAAGVT 113

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT------AIRGT 687
           ++H+      +H D+  +N  L      ++ D+G+    +  +   I T       +R  
Sbjct: 114 HMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIG--PSRYKEDYIETEDDKCVPLR-- 166

Query: 688 KGYVAPEW---FRNSTITAK----VDVYSFGVLLLEIISCRK 722
             ++APE    F    ITA+     +V++ GV L E+     
Sbjct: 167 --WLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAA 206

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 52.7 bits (126), Expect = 4e-07
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 3   LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 59

Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           L  +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 60  L-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 116

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K     +  A      GT  Y+APE   ++   
Sbjct: 117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKTFCGTPEYLAPEVLEDNDYG 174

Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 175 RAVDWWGLGVVMYEMMCGRLPF 196

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 26/215 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNE--VVVIGQTHHKNL 581
           +GRG+FG V    ++  + +    A+K L++  + +  E   F+ E  V+V G       
Sbjct: 9   IGRGAFGEV---AVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQ---W 62

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +  L +  + +N L LV ++   G L + L  F +  P    R    F IA  +L +H  
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMAR----FYIAEMVLAIHSI 118

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFR 697
                +H DIKP N+LLD   + R++DFG    L +NQ   +++++  GT  Y++PE  +
Sbjct: 119 HQLHYVHRDIKPDNVLLDMNGHIRLADFG--SCLKMNQDGTVQSSVAVGTPDYISPEILQ 176

Query: 698 N-----STITAKVDVYSFGVLLLEIISCRKSFDIE 727
                      + D +S GV + E++     F  E
Sbjct: 177 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 11/206 (5%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLV 582
           +G+G +G V++   +T   +    A+K L +      Q      K E  ++    H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSA 641
            L+     G    L+ E+L+ G L    F +L+       + A F ++   L L      
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGEL----FMHLEREGIFMEDTACFYLSEISLALEHLHQQ 119

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            II+ D+KP+NILLD   + +++DFGL K  ++++     T   GT  Y+APE    S  
Sbjct: 120 GIIYRDLKPENILLDAQGHVKLTDFGLCK-ESIHEGTVTHTFC-GTIEYMAPEILMRSGH 177

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIE 727
              VD +S G L+ ++++    F  E
Sbjct: 178 GKAVDWWSLGALMYDMLTGAPPFTAE 203

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)

Query: 263 FYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSD 322
            Y R TL+ +G   ++ +  N   +W++ WS P++ C         G CG    C  D +
Sbjct: 45  IYSRLTLSSEGSLERFTWIPNSQ-DWNLFWSAPKDQCDVY------GRCGPYGYC--DVN 95

Query: 323 RRPKCACPKG 332
             PKC C KG
Sbjct: 96  TSPKCNCIKG 105

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 50.8 bits (121), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
           +  +Q+ARG+ +L    S   +H D+  +N+LL      +I DFGLA+ +  + +   + 
Sbjct: 241 SFTYQVARGMEFL---ASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKG 297

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +      ++APE   ++  T   DV+S+G+LL EI S
Sbjct: 298 STFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 32/184 (17%)

Query: 550 VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF 609
           V +K LD   +D    F     ++ Q  H +L  + G C  G   ++V EF+ +G L   
Sbjct: 47  VVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVC 106

Query: 610 LF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR---- 662
           L    G +  +W +   +A Q+A  L YL ED +  ++H ++  +NILL     AR    
Sbjct: 107 LRKEKGRVPVAWKI--TVAQQLASALSYL-EDKN--LVHGNVCAKNILL-----ARLGLA 156

Query: 663 --------ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVL 713
                   +SD G++      + +  R        ++APE     ++++   D +SFG  
Sbjct: 157 EGTSPFIKLSDPGVSFTALSREERVERIP------WIAPECVPGGNSLSTAADKWSFGTT 210

Query: 714 LLEI 717
           LLEI
Sbjct: 211 LLEI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 50.0 bits (119), Expect = 3e-06
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 23/203 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE----FKNEVVVIGQTHHKNLV 582
           +GRG+FG V     L    ST  V   KL   F+  ++     F  E  ++   +   +V
Sbjct: 51  IGRGAFGEVQ----LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 106

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSA 641
           +L     + +   +V E++  G L      NL  ++++    A F  A  +L L    S 
Sbjct: 107 QLFYAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSM 161

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFR-- 697
             IH D+KP N+LLD   + +++DFG    + +N+   +R  TA+ GT  Y++PE  +  
Sbjct: 162 GFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQ 218

Query: 698 --NSTITAKVDVYSFGVLLLEII 718
             +     + D +S GV L E++
Sbjct: 219 GGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 49.6 bits (118), Expect = 4e-06
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL-LTLNQSKAIRT 682
           I   + R + YLHE+   +IIH DIK +NI ++   +  + DFG A   + +N +K    
Sbjct: 187 IERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW 243

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           A  GT    APE          VD++S G++L E+ +C  S 
Sbjct: 244 A--GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283

Length = 391

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 49.6 bits (118), Expect = 4e-06
 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           ++Q+A G+ +L    S   +H D+  +N+L+ +    +I DFGLA+ +  + +   + + 
Sbjct: 245 SYQVANGMEFL---ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGST 301

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
                ++APE   N+  T   DV+SFG+LL EI +
Sbjct: 302 FLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 50.1 bits (119), Expect = 5e-06
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 39/232 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           +++G G FG V+  ++   RT           R  ++ EK +   EV V+ +  HKN+VR
Sbjct: 19  KKIGNGRFGEVF--LVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVR 76

Query: 584 LLG-FCDEGQNRL-LVYEFLNNGTLASF------LFGNLKPSWNLRTNIAFQIARGLLYL 635
            +  F ++   +L ++ EF + G L+        +FG ++   +   +I  Q+   L Y 
Sbjct: 77  YIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEE--HAIVDITRQLLHALAYC 134

Query: 636 HE----DCSAQIIHCDIKPQNILLDDYYN-----------------ARISDFGLAKLLTL 674
           H         +++H D+KPQNI L                      A+I DFGL+K + +
Sbjct: 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI 194

Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTIT--AKVDVYSFGVLLLEIISCRKSF 724
              +++  +  GT  Y +PE   + T +   K D+++ G ++ E+ S +  F
Sbjct: 195 ---ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 49.0 bits (117), Expect = 6e-06
 Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 25/204 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  ++S    A+K   K + + +     F  E  ++   + + +V+
Sbjct: 51  IGRGAFGEVQ---LVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQ 107

Query: 584 L-LGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCS 640
           L   F D+ +   +V E++  G L + L  N  +   W       F  A  +L L    S
Sbjct: 108 LHYAFQDD-KYLYMVMEYMPGGDLVN-LMSNYDIPEKW-----ARFYTAEVVLALDAIHS 160

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFRN 698
              IH D+KP N+LLD   + +++DFG    + ++ +  +R  TA+ GT  Y++PE  ++
Sbjct: 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTC--MKMDANGMVRCDTAV-GTPDYISPEVLKS 217

Query: 699 STITA----KVDVYSFGVLLLEII 718
                    + D +S GV L E++
Sbjct: 218 QGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 48.5 bits (115), Expect = 7e-06
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 20/212 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  + +    A+K L++  + +  E   F+ E  V+    ++ +  
Sbjct: 9   IGRGAFGEV---AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITT 65

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L     +  N  LV ++   G L + L  F +  P    R    F +A  ++ +      
Sbjct: 66  LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMAR----FYLAEMVIAIDSVHQL 121

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFR--- 697
             +H DIKP NIL+D   + R++DFG    L L +   +++++  GT  Y++PE  +   
Sbjct: 122 HYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAME 179

Query: 698 --NSTITAKVDVYSFGVLLLEIISCRKSFDIE 727
                   + D +S GV + E++     F  E
Sbjct: 180 DGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 46.8 bits (112), Expect = 2e-05
 Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 43/220 (19%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FK----NEVVVI 573
           D ++    +  G++G+VY+     T      VA+KKL     + EKE F      E+ ++
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKT---GEIVALKKLK---MEKEKEGFPITSLREINIL 58

Query: 574 GQTHHKNLVRL----LGFCDEGQNRL-LVYEF--------LNNGTLASFLFGNLKPSWNL 620
            +  H N+V +    +G      +++ +V E+        +       FL   +K     
Sbjct: 59  LKLQHPNIVTVKEVVVG---SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVK----- 109

Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
              +  Q+  G+ +LH++    I+H D+K  N+LL++    +I DFGLA+          
Sbjct: 110 --CLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY- 163

Query: 681 RTAIRGTKGYVAPE-WFRNSTITAKVDVYSFGVLLLEIIS 719
            T +  T  Y APE        +  +D++S G +  E+++
Sbjct: 164 -TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT 202

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 46.4 bits (110), Expect = 4e-05
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
           T +A Q+   + Y+H +    IIH DIK +N+L++   +  + DFG A     + S    
Sbjct: 263 TAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319

Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
             I GT    APE       T  VD++S G+++ E
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 7e-05
 Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 46/235 (19%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAV-AVKKLDRVFQDGEKEFKN---EVVVIG 574
            +FK  + +G+G  G V+    L     T  + A+K LD+       + K    E  ++ 
Sbjct: 1   KHFKKIKLLGKGDVGRVF----LVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILA 56

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLL 633
              H  L  L           LV ++   G L   L    +P   L   +A F  A  LL
Sbjct: 57  TLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLL--QRQPGKCLSEEVARFYAAEVLL 114

Query: 634 ---YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR----- 685
              YLH      I++ D+KP+NILL +  +  +SDF L+K   +      +   +     
Sbjct: 115 ALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRS 171

Query: 686 ----------------------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
                                 GT+ Y+APE        + VD ++ G+LL E++
Sbjct: 172 SVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEML 226

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 8e-05
 Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 22/204 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  + +    A+K L++  + +  E   F+ E  V+     + +  
Sbjct: 9   IGRGAFGEV---AVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITN 65

Query: 584 L-LGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           L   F DE  N  LV ++   G L + L  F +  P    R    F +A  +L +     
Sbjct: 66  LHYAFQDE-NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMAR----FYLAEMVLAIDSVHQ 120

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFR-- 697
              +H DIKP N+LLD   + R++DFG    L L     +++ +  GT  Y++PE  +  
Sbjct: 121 LGYVHRDIKPDNVLLDKNGHIRLADFG--SCLRLLADGTVQSNVAVGTPDYISPEILQAM 178

Query: 698 ---NSTITAKVDVYSFGVLLLEII 718
                    + D +S GV + E++
Sbjct: 179 EDGKGRYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 45.2 bits (107), Expect = 8e-05
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 16/100 (16%)

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL----LTLNQSKA-IRTAIR- 685
           L YLH   +  I+H D+KP N+L+    + +++DFGL+K+    LT N  +  I    R 
Sbjct: 114 LEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTRE 170

Query: 686 -------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
                  GT  Y+APE          VD ++ G++L E +
Sbjct: 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 58/248 (23%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV----AVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +G G+FG     V L  +  T A+     ++K D + ++     K E  ++ +  ++ +V
Sbjct: 9   LGIGAFG----EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           +L     +  N   V +++  G + S L    + P    R    F IA   L +      
Sbjct: 65  KLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLAR----FYIAELTLAIESVHKM 120

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLA-------------------------------- 669
             IH DIKP NIL+D   + +++DFGL                                 
Sbjct: 121 GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180

Query: 670 -------KLLTLNQ------SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
                  +L TL Q       + +  ++ GT  Y+APE       T   D +S GV+L E
Sbjct: 181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240

Query: 717 IISCRKSF 724
           ++  +  F
Sbjct: 241 MLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 10/75 (13%)

Query: 349 FELSCWGGGQGYKKELFDFHELQLTNWHLSD-SERFRPYNEVQCKNSCLSDCFCAAVIFQ 407
             L+C     G       F +L      L D +      +  +C+ +CLS+C C A  + 
Sbjct: 1   TPLNC-----GGDGSTDGFLKLPDVK--LPDNASAITAISLEECREACLSNCSCTAYAYN 53

Query: 408 DDC--CWFKKLPLSN 420
           +    C      L+N
Sbjct: 54  NGSGGCLLWNGLLNN 68

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN---- 675
           L  NI   +   L Y+HE     I H DIKP+NI++D      I D+G+A    ++    
Sbjct: 127 LIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHI 183

Query: 676 -QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
             SK  +   RGT  Y   +    + +T + D+ S G  +L+
Sbjct: 184 EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225

Length = 294

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.1 bits (104), Expect = 3e-04
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           + RG+FG VY G             VKK D + ++   + + E   +  +    +V L  
Sbjct: 12  ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71

Query: 587 FCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                 N  LV E+L  G + S L  +G       ++  I+ ++A  L YLH      II
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKY-IS-EVALALDYLHRH---GII 126

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           H D+KP N+L+ +  + +++DFGL+K +TLN+
Sbjct: 127 HRDLKPDNMLISNEGHIKLTDFGLSK-VTLNR 157

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 43.1 bits (101), Expect = 5e-04
 Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 70/254 (27%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV----AVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +G G+FG     V L  +  T A+     ++K D + ++     K E  ++ +  ++ +V
Sbjct: 9   LGIGAFG----EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE-DCSA 641
           RL     +  N   V +++  G + S L         +R  I F       Y+ E  C+ 
Sbjct: 65  RLYYSFQDKDNLYFVMDYIPGGDMMSLL---------IRMGI-FPEDLARFYIAELTCAV 114

Query: 642 Q------IIHCDIKPQNILLDDYYNARISDFGLA-------------------------- 669
           +       IH DIKP NIL+D   + +++DFGL                           
Sbjct: 115 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFS 174

Query: 670 -------------KLLTLNQSKA------IRTAIRGTKGYVAPEWFRNSTITAKVDVYSF 710
                        +L  L +  A      +  ++ GT  Y+APE    +  T   D +S 
Sbjct: 175 NEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234

Query: 711 GVLLLEIISCRKSF 724
           GV+L E++  +  F
Sbjct: 235 GVILYEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.9 bits (101), Expect = 6e-04
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQT-HH 578
           F + +G G+FG V +     L    +   VAVK L       E+E   +E+ ++     H
Sbjct: 42  FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH 101

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KN+V LLG C  G   L++ E+   G L +FL
Sbjct: 102 KNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 42.5 bits (100), Expect = 6e-04
 Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 58/246 (23%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKLDR--VFQDGE-KEFKNEVVVIGQTHHKNLV 582
           +G G+FG     V L  +  T A+ A+K L +  V    +    K E  ++ +  ++ +V
Sbjct: 9   IGIGAFG----EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +L     +  N   V +++  G + S L   G +      R  IA ++   +  +H+   
Sbjct: 65  KLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIA-ELTCAIESVHK--- 119

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGL-------------------------------- 668
              IH DIKP NIL+D   + +++DFGL                                
Sbjct: 120 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSE 179

Query: 669 ---AKLLTLNQSKAIRTAIR-------GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
               +L  L + +  R   R       GT  Y+APE    +  T   D +S GV+L E++
Sbjct: 180 IDRCRLKPLER-RRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238

Query: 719 SCRKSF 724
             +  F
Sbjct: 239 VGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.9 bits (98), Expect = 9e-04
 Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)

Query: 526 EVGRGSFGIVYKGVILTTRTST-TAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E+GRG   +    V L   T T T V V+   L+   ++  K  +NEVV+     H N++
Sbjct: 5   EIGRGFCNLT--SVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIM 62

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIARGLLYLHEDC 639
                   G    ++  F+  G+ A+ L     P   S  L  NI F   RGL YLH++ 
Sbjct: 63  TSWTVFTTGSWLWVISPFMAYGS-ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN- 120

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL----NQSKAI------RTAIRGTKG 689
               IH +IK  +IL+    +  +S  GL+ L +L     ++K +       T++     
Sbjct: 121 --GYIHRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSV---LP 173

Query: 690 YVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSF 724
           +++PE  R        K D+YS G+   E+ + R  F
Sbjct: 174 WLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPF 210

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 41.6 bits (97), Expect = 0.001
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV---YEFLNNGTLASFLFG---NLKPS- 617
           + +NE++ +G+ +H+N++++        N  ++   Y+F     L SF++    + K   
Sbjct: 209 QLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF----DLYSFMYDEAFDWKDRP 264

Query: 618 --WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
                R  I  Q+   + Y+H     ++IH DIK +NI L+      + DFG A      
Sbjct: 265 LLKQTRA-IMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFE-K 319

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + +A      GT    +PE           D++S G++LL+++S
Sbjct: 320 EREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363

Length = 501

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 41.2 bits (96), Expect = 0.002
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 24/216 (11%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 584
           +VGRG++G VYK      R          L ++   G       E+ ++ +  H N++ L
Sbjct: 8   KVGRGTYGHVYKA----KRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIAL 63

Query: 585 LG-FCDEGQNRL-LVYEFLNNGTLASFLF-----GNLKPSWNLRT---NIAFQIARGLLY 634
              F      ++ L++++  +       F      N KP    R+   ++ +QI  G+ Y
Sbjct: 64  QKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHY 123

Query: 635 LHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLN-QSKAIRTAIRGTKG 689
           LH +    ++H D+KP NIL+     +    +I+D G A+L     +  A    +  T  
Sbjct: 124 LHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 180

Query: 690 YVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSF 724
           Y APE    +   T  +D+++ G +  E+++    F
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 32/148 (21%)

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD----------------DYYNARISDFG 667
           I FQ    L Y H +    ++H D+KP+NIL++                D    RI D G
Sbjct: 236 IIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG 293

Query: 668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE 727
                     +  RTAI  T+ Y +PE           D++S G ++ E+ + +  +D  
Sbjct: 294 -----GCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348

Query: 728 MGEEYAIL---------TDWAFDCYRNE 746
              E+  L         ++WA  C   E
Sbjct: 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEE 376

Length = 467

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 31/230 (13%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRL 584
           +VGRG++G VYK      R          L ++   G       E+ ++ +  H N++ L
Sbjct: 8   KVGRGTYGHVYKA----KRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISL 63

Query: 585 LG-FCDEGQNRL-LVYEFLNNGTLASFLF-----GNLKPSWNLR---TNIAFQIARGLLY 634
              F      ++ L++++  +       F      N KP    R    ++ +QI  G+ Y
Sbjct: 64  QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123

Query: 635 LHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLN-QSKAIRTAIRGTKG 689
           LH +    ++H D+KP NIL+     +    +I+D G A+L     +  A    +  T  
Sbjct: 124 LHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 180

Query: 690 YVAPEWFRNST-ITAKVDVYSFGVLLLEIIS------CRKSFDIEMGEEY 732
           Y APE    +   T  +D+++ G +  E+++      CR+  DI+    Y
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE-DIKTSNPY 229

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 60/241 (24%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQ-DGEKEFKNEVVVIGQTHHKNLV 582
           +G+G+FG V     L  +  T  + A+K L    +F+ D     K E  V+ ++    +V
Sbjct: 9   IGKGAFGEVR----LVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN--IAFQIARGLLYLHEDCS 640
            L     + Q   L+ EFL  G L + L       ++  +     F +A  +L +     
Sbjct: 65  SLYYSFQDAQYLYLIMEFLPGGDLMTMLI-----KYDTFSEDVTRFYMAECVLAIEAVHK 119

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLA-------------KL---------------- 671
              IH DIKP NIL+D   + ++SDFGL+             KL                
Sbjct: 120 LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSV 179

Query: 672 ------LTLNQSKAIRTAIR----------GTKGYVAPEWFRNSTITAKVDVYSFGVLLL 715
                 LT++    I T  +          GT  Y+APE F       + D +S G ++ 
Sbjct: 180 AVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239

Query: 716 E 716
           E
Sbjct: 240 E 240

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 40.3 bits (94), Expect = 0.003
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 22  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTE 81

Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L +FL
Sbjct: 82  REALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFL 130

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           N+V L  +     +  LV +    G L S +   L          A ++   L  LH   
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHR-- 103

Query: 640 SAQIIHC-DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
             + I C D+ P NILLDD  + +++ F     +   +      A+     Y APE    
Sbjct: 104 --EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEV---EDSCDGEAV--ENMYCAPEVGGI 156

Query: 699 STITAKVDVYSFGVLLLEIIS 719
           S  T   D +S G +L E+++
Sbjct: 157 SEETEACDWWSLGAILFELLT 177

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           ++L   +      L+ E++   TL        + S   + +IA Q+A  L  LH+     
Sbjct: 57  KVLASGESDGWSYLLMEWIEGETLD-------EVSEEEKEDIAEQLAELLAKLHQLPLLV 109

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKL 671
           + H D+ P NIL+DD     I D+  A  
Sbjct: 110 LCHGDLHPGNILVDDGKILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	813
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.98
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.98
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.98
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.98
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.98
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.98
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.98
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.98
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.98
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.98
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.98
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.98
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.98
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.98
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.98
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.98
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.98
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.98
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.98
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.98
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.98
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.98
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
KOG0586	596	consensus Serine/threonine protein kinase [General	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.93
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.93
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.93
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.92
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.92
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.91
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.91
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.91
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.89
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
PRK09188	365	serine/threonine protein kinase; Provisional	99.84
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.82
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.82
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.81
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.8
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.8
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.76
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.74
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.73
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.73
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.68
PRK12274	218	serine/threonine protein kinase; Provisional	99.68
PRK10345	210	hypothetical protein; Provisional	99.66
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.64
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.62
smart00090	237	RIO RIO-like kinase.	99.62
PRK14879	211	serine/threonine protein kinase; Provisional	99.61
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.59
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.58
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.57
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.51
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.48
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.45
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.44
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.42
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.25
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.19
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.12
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.12
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.01
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.98
KOG1243	690	consensus Protein kinase [General function predict	98.96
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	98.96
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.87
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.86
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.85
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.83
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.77
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.77
KOG3087	229	consensus Serine/threonine protein kinase [General	98.64
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.56
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.56
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.55
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	98.5
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.48
COG4248	637	Uncharacterized protein with protein kinase and he	98.44
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.38
PRK09902	216	hypothetical protein; Provisional	98.37
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.34
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.18
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.12
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.01
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.91
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.81
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.75
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	97.68
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.65
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.59
PF01636	239	APH: Phosphotransferase enzyme family This family	97.58
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.46
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.45
PLN02876	822	acyl-CoA dehydrogenase	97.25
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.24
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.17
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.12
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.1
PRK10593	297	hypothetical protein; Provisional	97.08
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.07
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.98
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.86
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.7
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.57
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.27
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.98
PRK05231	319	homoserine kinase; Provisional	95.46
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.05
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.88
PLN02236	344	choline kinase	94.65
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	94.6
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	94.59
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.59
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.33
PLN02756	418	S-methyl-5-thioribose kinase	94.23
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.07
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.28
KOG2268	465	consensus Serine/threonine protein kinase [Signal	93.13
KOG1236	565	consensus Predicted unusual protein kinase [Genera	92.88

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-52  Score=455.09  Aligned_cols=287  Identities=46%  Similarity=0.757  Sum_probs=251.7

Q ss_pred             CCCCCCHHHHHHHHhhcc--cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceE
Q 045343          507 NLPCFSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       507 ~~~~~~~~el~~~~~~~~--~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      ....|++.||..||.+|.  +.||+|+||.||||.+.    ++..||||++.....+..++|.+|+.++.+++|||||+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~----~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~L  136 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS----DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKL  136 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC----CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccE
Confidence            567799999999999998  58999999999999995    448999998876433215679999999999999999999


Q ss_pred             EeEeecCC-ceEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCE
Q 045343          585 LGFCDEGQ-NRLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA  661 (813)
Q Consensus       585 ~g~~~~~~-~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~  661 (813)
                      +|||.+.+ +++||||||++|+|.++|+...  .++|..|++|+.++|+||+|||+.+.+.|+|||||++|||||+++++
T Consensus       137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a  216 (361)
T KOG1187|consen  137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA  216 (361)
T ss_pred             EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence            99999999 4999999999999999998865  88999999999999999999999988899999999999999999999


Q ss_pred             EEeeccCccccccCcccceeecc-cccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH
Q 045343          662 RISDFGLAKLLTLNQSKAIRTAI-RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  740 (813)
                      ||+|||+|+........  .... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+.........+..|+.
T Consensus       217 KlsDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~  294 (361)
T KOG1187|consen  217 KLSDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK  294 (361)
T ss_pred             EccCccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence            99999999765431111  1122 79999999999999999999999999999999999999988665444445889998


Q ss_pred             HhhccCccccccccccc-ccccH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          741 DCYRNEKLDDLVEGDME-ALNDI-KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ..+....+.+++|+.+. ..... ++...+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus       295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            88888899999999986 44443 6788899999999999999999999999999766544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-44  Score=386.29  Aligned_cols=252  Identities=34%  Similarity=0.535  Sum_probs=209.0

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceE-EEEEEeecccccc--chhhhheeeeeeccccCCcceEEeEeecCC-ceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~-vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV  597 (813)
                      .+.+.||+|+||+||+|.+.     +.. ||||++.......  .++|.+|+.+|.+++|||||+++|+|.+.. ..++|
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~-----g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV  118 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWR-----GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV  118 (362)
T ss_pred             hhhhhcccCCceeEEEEEeC-----CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence            34466999999999999984     445 9999997643222  458999999999999999999999999888 79999


Q ss_pred             EeecCCCchhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeeCCCCCCcEEEcCCC-CEEEeeccCccccc
Q 045343          598 YEFLNNGTLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQ-IIHCDIKPQNILLDDYY-NARISDFGLAKLLT  673 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~-ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~  673 (813)
                      ||||++|+|.++++.  ...+++..+++++.|||+||.|||++   + |||||||++||||+.++ ++||+|||+++...
T Consensus       119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV  195 (362)
T ss_pred             EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence            999999999999988  57899999999999999999999965   5 99999999999999997 99999999998876


Q ss_pred             cCcccceeecccccccccCccccc--CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFR--NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ...  ...+...||..|||||++.  ...++.|+||||||++||||+||+.||........      +.....       
T Consensus       196 ~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~------~~~v~~-------  260 (362)
T KOG0192|consen  196 ISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV------ASAVVV-------  260 (362)
T ss_pred             ccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH------HHHHHh-------
Confidence            432  1133467999999999999  56999999999999999999999999986543111      111111       


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        ...+......+...+..++.+||+.||.+||++.+++..|+.+..
T Consensus       261 --~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  261 --GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             --cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence              111111222367889999999999999999999999999997655

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-43  Score=379.55  Aligned_cols=263  Identities=30%  Similarity=0.447  Sum_probs=221.4

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      -++......+.++||+|-||+||.|.+.    ....||||.++.. ....+.|.+|+++|++|+|+|||+++|+|..++.
T Consensus       201 wei~r~~l~l~~~LG~G~FG~V~~g~~~----~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p  275 (468)
T KOG0197|consen  201 WEIPREELKLIRELGSGQFGEVWLGKWN----GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP  275 (468)
T ss_pred             eeecHHHHHHHHHhcCCccceEEEEEEc----CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCc
Confidence            3556666778899999999999999995    3347999998764 3345689999999999999999999999999889


Q ss_pred             eEEEEeecCCCchhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 RLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ++||||||++|+|.++|..  ...+.....+.++.|||+|++||+   +.++|||||.++||||+++..+||+|||||+.
T Consensus       276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARL  352 (468)
T ss_pred             eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccc
Confidence            9999999999999999986  467889999999999999999999   55999999999999999999999999999996


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ...+.... .....-...|.|||.+....++.|+|||||||+||||+| |+.|+......+                +-+
T Consensus       353 ~~d~~Y~~-~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------------v~~  415 (468)
T KOG0197|consen  353 IGDDEYTA-SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------------VLE  415 (468)
T ss_pred             cCCCceee-cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----------------HHH
Confidence            55443322 333445678999999999999999999999999999999 888876433221                122


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                      .++...+.+.+..|+..+.++|..||+.+|++|||++.+...|+.+.....
T Consensus       416 ~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~  466 (468)
T KOG0197|consen  416 LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTE  466 (468)
T ss_pred             HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhccc
Confidence            344455555666789999999999999999999999999999998766543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-43  Score=361.88  Aligned_cols=256  Identities=27%  Similarity=0.394  Sum_probs=214.7

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEee
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      ++..||+.     .+.||+|..|+|||+.+.   .+++.+|+|.+.... ....+++.+|++++++.+||+||+++|.|.
T Consensus        76 i~~~dle~-----~~~lG~G~gG~V~kv~Hk---~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   76 ISLSDLER-----LGVLGSGNGGTVYKVRHK---PTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             cCHHHhhh-----hhhcccCCCcEEEEEEEc---CCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            44455543     478999999999999985   567899999995432 334578999999999999999999999998


Q ss_pred             cCCc-eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          590 EGQN-RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       590 ~~~~-~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      .... ..++||||++|||++++...+++++....+|+.+|++||.|||++  .+||||||||+|||++..|++||+|||.
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGV  225 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGV  225 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccc
Confidence            8884 999999999999999999889999999999999999999999963  6999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch--hhhhhHHHHHHhhccC
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE--EYAILTDWAFDCYRNE  746 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~--~~~~l~~~~~~~~~~~  746 (813)
                      ++.+.+.    .....+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+....+.  ....+           
T Consensus       226 S~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L-----------  290 (364)
T KOG0581|consen  226 SGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL-----------  290 (364)
T ss_pred             cHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH-----------
Confidence            9988765    245678999999999999999999999999999999999999999765221  11111           


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       +..+++..........+++++.+++..||++||.+||+++|++++
T Consensus       291 -l~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  291 -LCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             -HHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             222333222222222578999999999999999999999999865

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.3e-43  Score=392.46  Aligned_cols=268  Identities=29%  Similarity=0.477  Sum_probs=226.7

Q ss_pred             HHHHHHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEee
Q 045343          513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       513 ~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      ..++......+.++||+|+||+||+|......  ++...||||.|++.... ...+|++|++++..++|+|||+|+|+|.
T Consensus       480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR  559 (774)
T ss_pred             eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence            44666677778899999999999999876544  45678999999887655 6678999999999999999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL  655 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll  655 (813)
                      +++..+||+|||.+|+|.+||..+              ..++..+.+.|+.|||.|+.||-+   ..+|||||..+|+||
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLV  636 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLV  636 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhhcee
Confidence            999999999999999999999532              127788999999999999999994   499999999999999


Q ss_pred             cCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhh
Q 045343          656 DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAI  734 (813)
Q Consensus       656 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~  734 (813)
                      .++..|||+||||++.....+.........-..+|||||.|...++++++|||||||+|||+.+ |+.|+.....++.  
T Consensus       637 ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV--  714 (774)
T KOG1026|consen  637 GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV--  714 (774)
T ss_pred             ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH--
Confidence            9999999999999998776655443434455789999999999999999999999999999999 9999876554332  


Q ss_pred             hHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       735 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                           .+.+..+.        + ...+..++.+++.||+.||+.+|.+||+++||-..|+.....
T Consensus       715 -----Ie~i~~g~--------l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  715 -----IECIRAGQ--------L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             -----HHHHHcCC--------c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence                 22222222        2 334557899999999999999999999999999999987654

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.4e-43  Score=358.32  Aligned_cols=255  Identities=27%  Similarity=0.415  Sum_probs=207.9

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-------chhhhheeeeeeccccCCcceEEeEee
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-------EKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      ....|.+.+.||+|+||.|-+|...   .+++.||||.+++.....       .....+|+++|++++|||||++++++.
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~---~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~  246 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEK---KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE  246 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEc---ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee
Confidence            5566778899999999999999874   478899999997542221       223579999999999999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC---CCEEEeec
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY---YNARISDF  666 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Df  666 (813)
                      ..+..|||+||+++|+|.+++-.++.+.+..-..++.|++.|+.|||+   .||+||||||+|||+..+   ..+||+||
T Consensus       247 ~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  247 VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEeccc
Confidence            999999999999999999999999999999999999999999999995   499999999999999765   78999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccCCCC---CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhh
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI---TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~---~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      |+|+.....   ..+...+||+.|.|||++.+...   ..++|+||+||+||-+++|.+||....+...  +.    +..
T Consensus       324 GlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s--l~----eQI  394 (475)
T KOG0615|consen  324 GLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS--LK----EQI  394 (475)
T ss_pred             chhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc--HH----HHH
Confidence            999987633   22567899999999999987643   3478999999999999999999986544220  10    111


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+....      ......+..++..+|+.+||..||++|||++|++++
T Consensus       395 ~~G~y~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  395 LKGRYAF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             hcCcccc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            1111110      111233567899999999999999999999999864

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-42  Score=352.72  Aligned_cols=203  Identities=32%  Similarity=0.499  Sum_probs=181.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.++||+|+|++||+|.+.   .++..||||.+...  ..+..+-+..|+.+|+.++|+|||++++++..++..+||
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~---~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHK---KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             cceehhhccCcceEEEEEeEec---cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            3566778999999999999986   35689999999765  333445578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC------CCEEEeeccCccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY------YNARISDFGLAKL  671 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~------~~~kl~DfGla~~  671 (813)
                      ||||.+|+|.+||+.+..+++.+.+.++.|||.||++||+   .+||||||||+||||+..      -.+||+|||+|+.
T Consensus        88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            9999999999999999999999999999999999999995   599999999999999764      5689999999999


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      +.+...   ....+|++-|||||++..++|+.|+|+||+|++||++++|+.||+.....+
T Consensus       165 L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e  221 (429)
T KOG0595|consen  165 LQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKE  221 (429)
T ss_pred             CCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence            885432   456789999999999999999999999999999999999999998665443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.4e-42  Score=367.88  Aligned_cols=249  Identities=26%  Similarity=0.401  Sum_probs=211.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+|...+.||+|||..+|++...   ..+..||+|++.+.   .....+.+.+||++.++|+|||||+++++|++.+..|
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~---~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVY   94 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDL---DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVY   94 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEc---CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceE
Confidence            55777889999999999999873   36789999999763   2334566889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||.|+|.+++|..+++.+..+++.+++.++.||+.||.|||+   .+|+|||||..|+||+++.++||+|||||..+..+
T Consensus        95 ivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   95 IVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCc
Confidence            999999999999999999999999999999999999999995   59999999999999999999999999999998766


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..+  ..+.+||+.|+|||++....++..+||||+||+||-||.|++||+...-.+.-       ..+   +..+..-| 
T Consensus       172 ~Er--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety-------~~I---k~~~Y~~P-  238 (592)
T KOG0575|consen  172 GER--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY-------NKI---KLNEYSMP-  238 (592)
T ss_pred             ccc--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH-------HHH---HhcCcccc-
Confidence            443  45688999999999999999999999999999999999999999865322211       000   01111111 


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .....+..+||..+|++||.+|||+++|+.+
T Consensus       239 ------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  239 ------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             ------cccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                  1235677899999999999999999999964

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-42  Score=375.49  Aligned_cols=272  Identities=25%  Similarity=0.444  Sum_probs=230.3

Q ss_pred             CCCCCHHHHHHHHhhc-----------ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeec
Q 045343          508 LPCFSYKELEEATDNF-----------KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQ  575 (813)
Q Consensus       508 ~~~~~~~el~~~~~~~-----------~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~  575 (813)
                      +..++|+|--.|..+|           .+.||.|.||+|++|.++...+....||||.|+... ++...+|..|..||.+
T Consensus       607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ  686 (996)
T KOG0196|consen  607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ  686 (996)
T ss_pred             cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence            3457777666666554           457999999999999998777778899999998754 3445679999999999


Q ss_pred             cccCCcceEEeEeecCCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEE
Q 045343          576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNIL  654 (813)
Q Consensus       576 l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIl  654 (813)
                      ++||||++|.|+....+..++|+|||+||+|+.||..+ ..+++.+...++.+||.|+.||.   ..++|||||.++|||
T Consensus       687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNIL  763 (996)
T KOG0196|consen  687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNIL  763 (996)
T ss_pred             CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhhee
Confidence            99999999999999999999999999999999999764 67899999999999999999999   459999999999999


Q ss_pred             EcCCCCEEEeeccCccccccCcccceeec--ccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          655 LDDYYNARISDFGLAKLLTLNQSKAIRTA--IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       655 l~~~~~~kl~DfGla~~~~~~~~~~~~~~--~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ++.+..+|++|||++|.+..+.... .+.  ..-..+|.|||.|...+++.++||||||++|||.++ |.+|+-.....+
T Consensus       764 VNsnLvCKVsDFGLSRvledd~~~~-ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd  842 (996)
T KOG0196|consen  764 VNSNLVCKVSDFGLSRVLEDDPEAA-YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  842 (996)
T ss_pred             eccceEEEeccccceeecccCCCcc-ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence            9999999999999999875543211 222  223569999999999999999999999999999998 999985332211


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                                      +-+.++...+.+.+++++..|.+||+.|||+|-.+||++.+|+.+|++++.-
T Consensus       843 ----------------VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  843 ----------------VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             ----------------HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence                            2223455666777889999999999999999999999999999999997755

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.5e-42  Score=334.11  Aligned_cols=258  Identities=27%  Similarity=0.377  Sum_probs=208.6

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeec--cccccchhhhheeeeeeccccCCcceEEe-EeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKNEVVVIGQTHHKNLVRLLG-FCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g-~~~~~~  592 (813)
                      ...+.+++.++||+|.||+|||+...   .++..+|.|.++-  ...+....+..|+.+|++|+|||||+.++ -+.++.
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~---~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCL---LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN   92 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeec---cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence            34466788899999999999999875   4778999998862  22334456889999999999999999999 455555


Q ss_pred             c-eEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeeeCCCCCCcEEEcCCCCEEEeec
Q 045343          593 N-RLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCS-AQIIHCDIKPQNILLDDYYNARISDF  666 (813)
Q Consensus       593 ~-~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Df  666 (813)
                      + +.|||||+..|+|...+++    +..+++..+++++.|++.||.++|.... .-|+||||||.||+|+.+|.+||+||
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf  172 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF  172 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence            5 8999999999999998853    4678999999999999999999996322 23999999999999999999999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      |+++++......  ....+|||.||+||.+...+++.|+||||+||++|||+.-.+||.+..   ...+.    .     
T Consensus       173 GL~r~l~s~~tf--A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n---~~~L~----~-----  238 (375)
T KOG0591|consen  173 GLGRFLSSKTTF--AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN---LLSLC----K-----  238 (375)
T ss_pred             hhHhHhcchhHH--HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc---HHHHH----H-----
Confidence            999998876543  456889999999999999999999999999999999999999998652   11111    1     


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                         ++............++..+..++..|+..||+.||+...+++.+
T Consensus       239 ---KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  239 ---KIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             ---HHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence               11122222222346788999999999999999999955555444

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-39  Score=333.52  Aligned_cols=242  Identities=26%  Similarity=0.326  Sum_probs=202.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...++.+.||+|+||+||.+.-.   ..++.+|+|++++..   ....+...+|..+|.+++||.||+++-.|+++++++
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~---dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKK---DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEc---ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            34566799999999999998765   477899999997642   233456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||+||+.||.|..+|++...+++..+.-++..|+.||.|||   +.+||||||||+|||||.+|+++|+|||+++.....
T Consensus       102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD  178 (357)
T ss_pred             EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence            99999999999999999999999999999999999999999   459999999999999999999999999999965443


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  ....+||+.|||||++.+..++..+|.||+|+++|||++|.+||........       .+....+.        
T Consensus       179 ~~~--t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~-------~~~I~~~k--------  241 (357)
T KOG0598|consen  179 GDA--TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM-------YDKILKGK--------  241 (357)
T ss_pred             CCc--cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH-------HHHHhcCc--------
Confidence            322  4558999999999999999999999999999999999999999986543211       11111111        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRP  784 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  784 (813)
                      +.. .+.-...+..+++...|+.||++|.
T Consensus       242 ~~~-~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  242 LPL-PPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CCC-CCccCCHHHHHHHHHHhccCHHHhc
Confidence            110 1112357788999999999999995

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-38  Score=332.19  Aligned_cols=267  Identities=28%  Similarity=0.402  Sum_probs=205.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeec--cccCCcceEEeEeecCC----ce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ--THHKNLVRLLGFCDEGQ----NR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~  594 (813)
                      .++.+.||+|+||.||||++     .++.||||++..   +....|++|-+|.+.  ++|+||+++++.-..+.    +.
T Consensus       212 l~l~eli~~Grfg~V~KaqL-----~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey  283 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQL-----DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY  283 (534)
T ss_pred             hhhHHHhhcCccceeehhhc-----cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence            34568899999999999999     568999999864   345567777777665  58999999999987666    88


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC------SAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~------~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      +||+||.++|+|.+||..+ ..+|....+|+..+++||+|||++.      ++.|+|||||.+||||.+|+++.|+|||+
T Consensus       284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            9999999999999999766 4699999999999999999999763      56799999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCC-CC-----CccchhhHHHHHHHHHhCCcCCCcc-cchhhhh-------
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST-IT-----AKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAI-------  734 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-----~k~DVwS~Gvvl~elltG~~p~~~~-~~~~~~~-------  734 (813)
                      |..+.+..........+||.+|||||++.+.- +.     .+.||||+|.|||||++...-++.. .++-...       
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~  442 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN  442 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence            99988766554445588999999999997642 22     3699999999999999976555421 1111111       


Q ss_pred             ---hHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          735 ---LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       735 ---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                         +.+.....++++....+.+....    ...+.-+++.+..||..||+.|.|+.=|.+.+..+....
T Consensus       443 hPt~e~mq~~VV~kK~RP~~p~~W~~----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  443 HPTLEEMQELVVRKKQRPKIPDAWRK----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             CCCHHHHHHHHHhhccCCCChhhhhc----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence               11111111222222222222221    244678899999999999999999999999988776553

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2e-39  Score=320.26  Aligned_cols=263  Identities=22%  Similarity=0.306  Sum_probs=207.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |+...++|+|+||+|||+..   +.+++.||||++....+  ...+-.++|+++|++++|+|||.|+++|.....++||+
T Consensus         4 YE~LgkvGEGSYGvV~KCrn---k~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRN---KDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             HhhhhccccCcceEEEEecc---CCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            44456799999999999987   45889999999965432  12345789999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||++.--|.++-......+.+...+++.|+++|+.|+|.   .+++||||||+||||+.++.+||+|||+|+.+..... 
T Consensus        81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd-  156 (396)
T KOG0593|consen   81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD-  156 (396)
T ss_pred             eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcc-
Confidence            999997777776666778899999999999999999995   5999999999999999999999999999998874221 


Q ss_pred             ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH--------HhhccC-cc
Q 045343          679 AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF--------DCYRNE-KL  748 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~~~~~-~~  748 (813)
                       .-+.++.|..|+|||.+.+ .+|...+||||+||++.||++|.+.|.+..+-++..++....        ..+... -.
T Consensus       157 -~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F  235 (396)
T KOG0593|consen  157 -NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF  235 (396)
T ss_pred             -hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence             1466789999999999987 589999999999999999999999998776644443322211        111111 11


Q ss_pred             ccccccccccccc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          749 DDLVEGDMEALND-----IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       749 ~~~~~~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ..+.-|..+...+     .....-+++++..||+.||.+|++-++++.
T Consensus       236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            1111111111111     233457889999999999999999999885

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-39  Score=339.94  Aligned_cols=251  Identities=27%  Similarity=0.346  Sum_probs=210.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      .+.|.+.||+|+|++|++|...   ..++.+|||++.+.   .+...+-+..|-.+|.+| .||.|++|+-.|.+...+|
T Consensus        74 DF~Fg~~lGeGSYStV~~A~~~---~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   74 DFKFGKILGEGSYSTVVLAREK---ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             hcchhheeccccceeEEEeeec---CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            4567899999999999999875   47789999999753   233445577888899999 8999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +|+||+++|+|.++|...+.+++...+.++.+|+.||+|||   +.|||||||||+|||||.++++||+|||.|+.+.+.
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence            99999999999999999999999999999999999999999   569999999999999999999999999999988654


Q ss_pred             ccc---------ce--eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          676 QSK---------AI--RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       676 ~~~---------~~--~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      +..         ..  ...++||..|.+||++.....+..+|+|+|||+||.|+.|.+||.+..+  +..+         
T Consensus       228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--yliF---------  296 (604)
T KOG0592|consen  228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--YLIF---------  296 (604)
T ss_pred             hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--HHHH---------
Confidence            322         11  1458899999999999999999999999999999999999999986543  1111         


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                          +++++-....  ....++.+.+|+.+.|..||.+|+|.++|.++-
T Consensus       297 ----qkI~~l~y~f--p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  297 ----QKIQALDYEF--PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             ----HHHHHhcccC--CCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence                1111111111  123347788999999999999999999998874

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2e-38  Score=347.28  Aligned_cols=263  Identities=27%  Similarity=0.408  Sum_probs=203.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCC-
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ-  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-  592 (813)
                      ...+++.++||+|+||.||+|....  ....+..||||+++.... ...+.+.+|+.++.++ +|+||++++++|...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            4557788999999999999997532  223456899999875322 2245688999999999 8999999999987654 


Q ss_pred             ceEEEEeecCCCchhhhhhcc-----------------------------------------------------------
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-----------------------------------------------------------  613 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-----------------------------------------------------------  613 (813)
                      ..++||||+++|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            578999999999999998642                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccc
Q 045343          614 ---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY  690 (813)
Q Consensus       614 ---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y  690 (813)
                         ..+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++...............++..|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence               236778889999999999999995   59999999999999999999999999999876433222212234467789


Q ss_pred             cCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHH
Q 045343          691 VAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV  769 (813)
Q Consensus       691 ~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  769 (813)
                      +|||++.+..++.++||||||+++|||++ |..||......+.  +.    .....+....         .....+..+.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~----~~~~~~~~~~---------~~~~~~~~l~  307 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FC----QRLKDGTRMR---------APENATPEIY  307 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HH----HHHhcCCCCC---------CCCCCCHHHH
Confidence            99999999899999999999999999997 9999975432211  10    1111111000         0112356788


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          770 MVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       770 ~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      +++.+||+.||.+|||+.||++.|+.++.
T Consensus       308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         308 RIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-38  Score=337.09  Aligned_cols=250  Identities=28%  Similarity=0.445  Sum_probs=208.9

Q ss_pred             CCCCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeE
Q 045343          508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF  587 (813)
Q Consensus       508 ~~~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~  587 (813)
                      +-.+.+++|.+-     +=||.|+.|-||+|.+     .++.||||+++...       ..+|+-|++|+|+||+.+.|+
T Consensus       118 ~WeiPFe~IsEL-----eWlGSGaQGAVF~Grl-----~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGV  180 (904)
T KOG4721|consen  118 LWEIPFEEISEL-----EWLGSGAQGAVFLGRL-----HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGV  180 (904)
T ss_pred             hccCCHHHhhhh-----hhhccCcccceeeeec-----cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeee
Confidence            344556666554     4599999999999998     67899999986532       346778899999999999999


Q ss_pred             eecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          588 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       588 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      |...-..+||||||+.|-|...|+............+..+||.|+.|||.+   .|||||||.-||||..+..+||+|||
T Consensus       181 CtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFG  257 (904)
T KOG4721|consen  181 CTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFG  257 (904)
T ss_pred             ecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEecccc
Confidence            999999999999999999999999999999999999999999999999965   99999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      -++......   ....+.||..|||||+|.+.+.++|+|||||||||||||||..|+.......  .             
T Consensus       258 TS~e~~~~S---TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA--I-------------  319 (904)
T KOG4721|consen  258 TSKELSDKS---TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA--I-------------  319 (904)
T ss_pred             chHhhhhhh---hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe--e-------------
Confidence            998765331   1345789999999999999999999999999999999999999986332110  0             


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      +..+=...+..+.+..+++.+.-|+++||+-.|..||++.+|+.+|+-
T Consensus       320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            000111122333445778889999999999999999999999999963

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-39  Score=333.59  Aligned_cols=262  Identities=24%  Similarity=0.317  Sum_probs=207.4

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccc-hhhhheeeeeeccc-cCCcceEEeEeecCC-c
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTH-HKNLVRLLGFCDEGQ-N  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~g~~~~~~-~  593 (813)
                      ....|...++||.|.||+||+|+-.   ..+..||||++++.....+ ..-.+|+..|++++ |||||+|.+++.+.+ .
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~---~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSK---ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeec---CCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            3456788899999999999999874   4677899999986543322 22467999999998 999999999998888 8


Q ss_pred             eEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      +++|||||+. +|.++++++ ..+++..++.|+.||++||+|+|++   |+.|||+||+|||+.....+||+|||+||..
T Consensus        85 L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   85 LYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             EeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence            9999999955 899999776 5689999999999999999999965   9999999999999999999999999999987


Q ss_pred             ccCcccceeecccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc---
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFR-NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL---  748 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---  748 (813)
                      .....   -+.++.|..|+|||++. ..-|+.+.|+||+|||++|+.+-++.|.+..+-++..-   +.+.+.....   
T Consensus       161 ~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K---Ic~VLGtP~~~~~  234 (538)
T KOG0661|consen  161 RSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK---ICEVLGTPDKDSW  234 (538)
T ss_pred             ccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH---HHHHhCCCccccc
Confidence            65432   56788999999999875 45789999999999999999999999976654322211   1111111111   


Q ss_pred             --------------cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 --------------DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 --------------~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                    .+.....+..... ....++.+++..|++.||.+|||++|++++
T Consensus       235 ~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  235 PEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             hhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                          1111111111112 367888999999999999999999999986

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=333.51  Aligned_cols=267  Identities=25%  Similarity=0.395  Sum_probs=217.0

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-chhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +|+-+..-.|.|+||+|-||+|..+.+.    ....||||+++...... .++|..|+++|.+++|||||+|+|+|..++
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeve----g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De  608 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVE----GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD  608 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEec----CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence            3455555567899999999999999984    45899999998654433 478999999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      .+++|+|||++|+|..||..+.  ...-+...+|+.|||.|++||.   +.++|||||.++|+|+|.++++||+|||+++
T Consensus       609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR  685 (807)
T KOG1094|consen  609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSR  685 (807)
T ss_pred             chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCccccc
Confidence            9999999999999999998763  3345556779999999999999   6799999999999999999999999999999


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh--CCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt--G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      -+.......+....+-..+|||+|.+...+++.++|||+||+.|||+++  ...|+.....+.   ..+.....+.....
T Consensus       686 ~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~  762 (807)
T KOG1094|consen  686 NLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGR  762 (807)
T ss_pred             ccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCc
Confidence            8877777666666777899999999999999999999999999999865  667776433221   11111222222111


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..      -...+.-++..+.+++.+||+.|.++||+++++...|.+.
T Consensus       763 ~~------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  763 QV------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ce------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            11      1122345788999999999999999999999999999764

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-38  Score=330.60  Aligned_cols=254  Identities=28%  Similarity=0.423  Sum_probs=201.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC--ceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--NRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~lV~  598 (813)
                      ....+.||+|+||+||++...+   ++...|||.+........+.+.+|+.+|.+++|||||+.+|.....+  ...+.|
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~---~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKK---TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             hhhhccccCccceEEEEEEecC---CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            4556889999999999998853   37889999987643222556899999999999999999999855444  589999


Q ss_pred             eecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.+++.... .+++..+.+++.||++||+|||   +.+|+||||||+||||+. ++.+||+|||+++......
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence            9999999999998765 7999999999999999999999   459999999999999999 7999999999998776411


Q ss_pred             -ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          677 -SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       677 -~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                       .........||+.|||||++... ....++|||||||++.||+||++||......     ..+............+   
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~-----~~~~~~ig~~~~~P~i---  244 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE-----AEALLLIGREDSLPEI---  244 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch-----HHHHHHHhccCCCCCC---
Confidence             11113457899999999999863 3345999999999999999999999753111     0111111111111111   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                            +...+....+++..|++.||++|||+.+++++--
T Consensus       245 ------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  245 ------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             ------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence                  1234677889999999999999999999998863

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-38  Score=340.55  Aligned_cols=264  Identities=29%  Similarity=0.428  Sum_probs=208.4

Q ss_pred             HHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeec
Q 045343          513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE  590 (813)
Q Consensus       513 ~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  590 (813)
                      +-||......+.+.||+|.||+||||.+-      ..||||.++..  ..+..+.|++|+.++++-+|.||+-+.|+|..
T Consensus       386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh------GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  386 EWEIPPEEVLLGERIGSGSFGTVYRGRWH------GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccCHHHhhccceeccccccceeecccc------cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            33455555667789999999999999983      25999999753  33456789999999999999999999999988


Q ss_pred             CCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +.. .+|+.+|++.+|+.+|+-. .+++....++|++|||+|+.|||   .++|||||||..||||.+++.|||+|||++
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLa  535 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLA  535 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccce
Confidence            877 9999999999999999864 57888899999999999999999   569999999999999999999999999998


Q ss_pred             cccccCcccceeecccccccccCcccccCC---CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNS---TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      ..-..-..........|...|||||++..+   +|+..+||||||+++|||++|..||.....+. ..      -.+..+
T Consensus       536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq-Ii------fmVGrG  608 (678)
T KOG0193|consen  536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ-II------FMVGRG  608 (678)
T ss_pred             eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh-eE------EEeccc
Confidence            754322111112233477889999999654   68999999999999999999999998332221 10      011111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+.    +++. .....+.++|.+|+..||..++++||.+.+|+..|+.++.
T Consensus       609 ~l~----pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  609 YLM----PDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             ccC----ccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            110    1111 1123567899999999999999999999999999988765

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.1e-38  Score=329.01  Aligned_cols=265  Identities=25%  Similarity=0.282  Sum_probs=206.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC--Cce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  594 (813)
                      ..++-.++||+|.||.||||...   .+++.||+|++....  +....-..+||.||++|.||||++|.+...+.  ..+
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~---~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDL---ETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeec---ccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            44556689999999999999874   478899999997644  22334567899999999999999999988766  579


Q ss_pred             EEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||+|||++ +|.-++.. ...+++.++..++.|++.||.|+|   +.+|+|||||.+|||||.+|.+||+|||||+++.
T Consensus       194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT  269 (560)
T ss_pred             EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence            999999988 66666655 568999999999999999999999   5699999999999999999999999999999888


Q ss_pred             cCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH-----HhhccCc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF-----DCYRNEK  747 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----~~~~~~~  747 (813)
                      ...... .+..+-|..|.|||++.+. .|+..+|+||.||||.||+.|++.|.+..+.++...+-...     ..|....
T Consensus       270 ~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k  348 (560)
T KOG0600|consen  270 PSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK  348 (560)
T ss_pred             CCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence            766544 5667789999999999876 69999999999999999999999998766544332211110     1111111


Q ss_pred             cc--cccccc------ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LD--DLVEGD------MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~--~~~~~~------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.  ..+.+.      +... -.......++|+..+|..||.+|.|+.++++.
T Consensus       349 LP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  349 LPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             CCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            11  111110      0000 11234567889999999999999999999864

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-38  Score=336.69  Aligned_cols=246  Identities=28%  Similarity=0.401  Sum_probs=207.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      .++||+|+.|.||.+...   ..+..||||++........+-+.+|+.+|+..+|+|||+++..+..++++|+|||||++
T Consensus       278 ~~kigqgaSG~vy~A~~~---~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g  354 (550)
T KOG0578|consen  278 FKKIGQGATGGVYVARKI---STKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG  354 (550)
T ss_pred             hhhhccccccceeeeeec---cCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence            368999999999998764   46678999999876555566689999999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeec
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      |+|.|.+.... +++.++..|+.++++||+|||.   .+|+|||||.+|||++.++.+||+|||+...+...+.+  ...
T Consensus       355 gsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K--R~T  428 (550)
T KOG0578|consen  355 GSLTDVVTKTR-MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK--RST  428 (550)
T ss_pred             Cchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCc--ccc
Confidence            99999886543 7899999999999999999994   59999999999999999999999999999988776654  566


Q ss_pred             ccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHH
Q 045343          684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK  763 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (813)
                      .+||+.|||||++....|++|+||||||++++||+-|.+||--+.+-....+       ...       .+..+......
T Consensus       429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL-------Ia~-------ng~P~lk~~~k  494 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------IAT-------NGTPKLKNPEK  494 (550)
T ss_pred             ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH-------Hhh-------cCCCCcCCccc
Confidence            8899999999999999999999999999999999999999974332111111       011       11111122334


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          764 CVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       764 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+..+.+++.+||+.|+++|+++.|+|++
T Consensus       495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  495 LSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            57889999999999999999999999975

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2e-37  Score=330.34  Aligned_cols=260  Identities=20%  Similarity=0.312  Sum_probs=206.2

Q ss_pred             CCCCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc---chhhhheeeeeeccccCCcceE
Q 045343          508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       508 ~~~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      ++.++++++...+   ...||+|++|.||+|..     +++.||||+++......   .+.+.+|+.+|.+++||||+++
T Consensus        12 ~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~   83 (283)
T PHA02988         12 IKCIESDDIDKYT---SVLIKENDQNSIYKGIF-----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI   83 (283)
T ss_pred             ceecCHHHcCCCC---CeEEeeCCceEEEEEEE-----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4455666662221   14689999999999987     57899999997643322   3567899999999999999999


Q ss_pred             EeEeec----CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          585 LGFCDE----GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       585 ~g~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      ++++.+    ....++||||+++|+|.+++.....+++....+++.|++.||.|||+  ..+++||||||+|||+++++.
T Consensus        84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~  161 (283)
T PHA02988         84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYK  161 (283)
T ss_pred             eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCc
Confidence            999866    34678999999999999999888889999999999999999999995  247889999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW  738 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~  738 (813)
                      +||+|||+++.+....     ....++..|+|||++.+  ..++.++|||||||++|||++|+.||......+.   ...
T Consensus       162 ~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~---~~~  233 (283)
T PHA02988        162 LKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI---YDL  233 (283)
T ss_pred             EEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH---HHH
Confidence            9999999998654321     22457889999999976  6789999999999999999999999975432211   111


Q ss_pred             HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      +   ...+ .        ....+..+++.+.+++.+||+.||++|||++||++.|+.+.
T Consensus       234 i---~~~~-~--------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        234 I---INKN-N--------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             H---HhcC-C--------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            0   0000 0        00111234678899999999999999999999999998764

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-38  Score=364.72  Aligned_cols=265  Identities=28%  Similarity=0.453  Sum_probs=215.9

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCc--ceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTS--TTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +......+.+.||+|+||.||+|....-..+  ...||||.+++.. .+...+|.+|..+|+.++|||||+++|+|.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            3445556678899999999999998754433  4569999997653 445678999999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEee
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD  665 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~D  665 (813)
                      ..++++|||++|+|..||.+.       ..+.....+.++.|||+|+.||++   +++|||||.++|+||+....+||+|
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaD  845 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIAD  845 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcc
Confidence            999999999999999999754       457888999999999999999994   5999999999999999999999999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ||||+.+...+.........-...|||||.+....++.|+|||||||+|||++| |..||......+...      ....
T Consensus       846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------~~~~  919 (1025)
T KOG1095|consen  846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------DVLE  919 (1025)
T ss_pred             cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH------HHHh
Confidence            999995544433322222234568999999999999999999999999999999 888886543322111      1112


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      .+          +.+.+..|++.+.++|..||+.+|++||++..|++.++.+..-
T Consensus       920 gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  920 GG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             CC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            22          2233556889999999999999999999999999998877654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-39  Score=347.71  Aligned_cols=267  Identities=30%  Similarity=0.396  Sum_probs=213.6

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceE-EEEEEeec---cccccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~-vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      |......+.++||+|+||.||+|.+......... ||||..+.   ......++|.+|.++|++++|+|||+++|++...
T Consensus       154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~  233 (474)
T KOG0194|consen  154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE  233 (474)
T ss_pred             EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence            3344445668999999999999999865432233 99999885   3345567899999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      +.+++|||+|.||+|.++|.... .++..++..++.+.|.||+|||   +.+++||||.++|+|++.++.+||+|||+++
T Consensus       234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~  310 (474)
T KOG0194|consen  234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSR  310 (474)
T ss_pred             CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence            99999999999999999998876 5999999999999999999999   4599999999999999999999999999988


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ........  .....-..+|+|||.+....++.++|||||||++||+.+ |..|+.+....+   +..++          
T Consensus       311 ~~~~~~~~--~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~---v~~kI----------  375 (474)
T KOG0194|consen  311 AGSQYVMK--KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE---VKAKI----------  375 (474)
T ss_pred             CCcceeec--cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH---HHHHH----------
Confidence            65411111  112235679999999999999999999999999999999 888887544321   11111          


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCC
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP  802 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p  802 (813)
                        +....+...+...+..+..++..|+..+|++||+|.++.+.|+.+.....+
T Consensus       376 --~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  376 --VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             --HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence              011111112224467888889999999999999999999999987765443

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-37  Score=320.67  Aligned_cols=261  Identities=23%  Similarity=0.327  Sum_probs=207.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..|++.++||.|..++||+|...   ..+..||||++....- ...+.+.+|+..|+.++||||++++..|..++.+|+|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~---p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCI---PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeec---ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            45788899999999999999875   3558999999964322 2257899999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |.||.+||+.++++..  ..+++..+..|++++++||.|||++   |.||||||+.||||+.+|.+||+|||.+..+...
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            9999999999999764  4688999999999999999999965   9999999999999999999999999988766543


Q ss_pred             cccc-ee-ecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          676 QSKA-IR-TAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       676 ~~~~-~~-~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ..+. .. ...+||+.|||||++..  ..|+.|+||||||+...||.+|..||....+-....      ..+.. ....+
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl------~tLqn-~pp~~  252 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL------LTLQN-DPPTL  252 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH------HHhcC-CCCCc
Confidence            3221 12 45689999999999643  368999999999999999999999997554322111      11111 11111


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .-..+...........+.+++..||+.||.+|||+++++++
T Consensus       253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            11122222334456689999999999999999999999864

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=3.9e-37  Score=299.50  Aligned_cols=261  Identities=22%  Similarity=0.294  Sum_probs=206.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +|.-.++||+|.||.||+|...   +.++.||||+++....  .......+|++.|+.++|+||+.|++.|.+.+...||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~---~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV   79 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDT---ETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV   79 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEec---CCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence            3555688999999999999874   4778999999975422  2244678999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +|||+. +|+..+++. ..++...+..++.++++||+|||.   ..|+||||||.|+|++.+|.+||+|||+|+.+....
T Consensus        80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            999976 888888765 567889999999999999999995   599999999999999999999999999999987554


Q ss_pred             ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccccc--
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDD--  750 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~--  750 (813)
                      ..  .+..+-|..|.|||.+.+. .|+..+|+||.|||+.||+-|.+-|.+..+-++...   +.+.+..   +...+  
T Consensus       156 ~~--~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~---If~~LGTP~~~~WP~~~  230 (318)
T KOG0659|consen  156 RI--QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSK---IFRALGTPTPDQWPEMT  230 (318)
T ss_pred             cc--cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHH---HHHHcCCCCcccCcccc
Confidence            33  2333689999999999875 689999999999999999999988876655333222   2222221   11111  


Q ss_pred             -ccc---------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          751 -LVE---------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       751 -~~~---------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                       +.|         +.+.. .-......+.+++..++..||.+|++++|++++=
T Consensus       231 ~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  231 SLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             ccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence             111         11111 1123456679999999999999999999999763

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-37  Score=335.75  Aligned_cols=250  Identities=26%  Similarity=0.372  Sum_probs=205.2

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc----cc-ccchhhhheeeeeeccc-cCCcceEEeEeec
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV----FQ-DGEKEFKNEVVVIGQTH-HKNLVRLLGFCDE  590 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~  590 (813)
                      ....|.+.+.||+|.||.|++|....   .+..||||.+...    .. ...+.+.+|+.++++++ ||||++++.++..
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~---t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRL---TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeecc---CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            34567788999999999999998753   4589999976553    11 23456778999999998 9999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccCc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLA  669 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGla  669 (813)
                      ....++||||+.+|+|.+++....++.+.....+++|++.|++|||   +.+|+||||||+|||++.+ +++||+|||++
T Consensus        92 ~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            9999999999999999999999889999999999999999999999   4599999999999999999 99999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCC-CC-CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNST-IT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      .....  ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+......   +.    ..     
T Consensus       169 ~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---l~----~k-----  234 (370)
T KOG0583|consen  169 AISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---LY----RK-----  234 (370)
T ss_pred             cccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---HH----HH-----
Confidence            98741  112255678999999999999987 76 68999999999999999999998632211   10    01     


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                         +.......+.... ...+..++.+||+.||.+|+++.+|+
T Consensus       235 ---i~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  235 ---IRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             ---HhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence               1111111111111 67889999999999999999999999

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.5e-37  Score=325.55  Aligned_cols=261  Identities=21%  Similarity=0.343  Sum_probs=208.6

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      |....+.+.+.||+|+||.||+|.+......+..||+|.++.... .....+.+|+.++.+++||||+++++++..++..
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence            345667888999999999999998765555678999999875422 2235688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ++||||+++|+|.+++... ..+++..++.++.||+.||+|||+.   +++||||||+|||++.++.+|++|||.+....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            9999999999999999764 5789999999999999999999954   99999999999999999999999999876543


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||......+.   ...    .....     
T Consensus       159 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~---~~~----~~~~~-----  225 (266)
T cd05064         159 SEAIYT-TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV---IKA----VEDGF-----  225 (266)
T ss_pred             ccchhc-ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHH----HHCCC-----
Confidence            221111 112335678999999999999999999999999999875 9999975433211   111    11110     


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                          .......++..+.+++..||+.+|.+||++++|++.|+++
T Consensus       226 ----~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         226 ----RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                0011223467789999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3e-37  Score=342.07  Aligned_cols=262  Identities=27%  Similarity=0.390  Sum_probs=203.9

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ....+.+.++||+|+||.||+|....  .......||||+++... ....+.+.+|+.++..+ +||||++++++|.++.
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            34457778999999999999997532  22355689999986432 22345688999999999 8999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc-----------------------------------------------------------
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-----------------------------------------------------------  613 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-----------------------------------------------------------  613 (813)
                      ..++||||+++|+|.+++...                                                           
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            999999999999999988542                                                           


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          614 ----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       614 ----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                                      ..+++..+++++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  269 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN  269 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence                            136788899999999999999995   5999999999999999999999999999987654332


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ........++..|+|||.+.+..++.++||||||+++|||++ |..||........  +..    ....+...       
T Consensus       270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~--~~~----~~~~~~~~-------  336 (375)
T cd05104         270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK--FYK----MIKEGYRM-------  336 (375)
T ss_pred             ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH--HHH----HHHhCccC-------
Confidence            221223345678999999999999999999999999999998 8888864432211  111    11111000       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                        ......+.++.+++.+||+.||++||++.||+++|++.
T Consensus       337 --~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         337 --LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence              00111246788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.3e-38  Score=319.32  Aligned_cols=251  Identities=22%  Similarity=0.352  Sum_probs=211.6

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      .+-.|+|.+.||+|.||.|-++...   ..++.||||.+++..-.   +.-.+.+||+||+.|+||||+.++.+|+..+.
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~---~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK  127 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEH---KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK  127 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhc---cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence            4567889999999999999998753   47889999998764333   33457899999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ..|||||..+|.|.||+.....+++.+.+.++.||..|+.|+|.+   +++|||||.+|||||+++++||+|||++.++.
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~  204 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA  204 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence            999999999999999999999999999999999999999999965   99999999999999999999999999998876


Q ss_pred             cCcccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...   ....++|.+-|.+||++.+.+| .+.+|-|||||+||.|+.|..||++..-   ..+.            .++.
T Consensus       205 ~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lv------------rQIs  266 (668)
T KOG0611|consen  205 DKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLV------------RQIS  266 (668)
T ss_pred             ccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHH------------HHhh
Confidence            432   2567899999999999999987 5789999999999999999999986432   1111            1111


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .+....   .+.+....-||+|||..||++|.|+.+|..+.-
T Consensus       267 ~GaYrE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  267 RGAYRE---PETPSDASGLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             cccccC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence            222211   122345677999999999999999999998873

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.5e-36  Score=327.17  Aligned_cols=266  Identities=25%  Similarity=0.407  Sum_probs=203.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc-------------CCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT-------------RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVR  583 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~-------------~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~  583 (813)
                      ...+.+.++||+|+||.||++.....             ...+..||||.+.... .....++.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            34567789999999999999986432             1234579999986532 223457899999999999999999


Q ss_pred             EEeEeecCCceEEEEeecCCCchhhhhhcc-------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 045343          584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN-------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQII  644 (813)
Q Consensus       584 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iv  644 (813)
                      +++++.+.+..++||||+++|+|.+++...                   ..+++..+++++.||+.||.|||+   .+|+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCcc
Confidence            999999999999999999999999988542                   235788899999999999999995   4999


Q ss_pred             eCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh--CCc
Q 045343          645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRK  722 (813)
Q Consensus       645 H~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt--G~~  722 (813)
                      ||||||+|||++.++.+||+|||+++.+.............++..|+|||++....++.++||||||+++|||++  +..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            999999999999999999999999987654332222233456789999999988889999999999999999987  456


Q ss_pred             CCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       723 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      ||........   .............. ..     ......++..+.+++.+||+.||.+|||+.||.+.|++
T Consensus       241 p~~~~~~~~~---~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         241 PYGELTDEQV---IENAGEFFRDQGRQ-VY-----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CCCcCCHHHH---HHHHHHHhhhcccc-cc-----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            6654332211   11111111111000 00     00112345788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.6e-37  Score=325.07  Aligned_cols=252  Identities=33%  Similarity=0.536  Sum_probs=197.3

Q ss_pred             cccccceeeeeeEEEEEEe-ccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          523 FKEEVGRGSFGIVYKGVIL-TTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.+.||.|.||.||+|.+. ........|+||.++.... ...+++.+|++.+++++|+||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            5678999999999999997 4555678899999965322 2367899999999999999999999999988889999999


Q ss_pred             cCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          601 LNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       601 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      +++|+|.++|...  ..+++..+.+|+.||++||+|||+.   +++|++|+++||+++.++.+||+|||++.........
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            9999999999876  7889999999999999999999964   8999999999999999999999999999877332222


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      ...........|+|||.+....++.++||||||+++|||++ |+.|+......+   +.    ..+.....         
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~----~~~~~~~~---------  223 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---II----EKLKQGQR---------  223 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HH----HHHHTTEE---------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc----cccccccc---------
Confidence            21233446789999999998889999999999999999999 678876442211   11    11111111         


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ......++..+.+++..||+.+|++||++.+|++.|
T Consensus       224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            111123457788999999999999999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=4.2e-37  Score=340.63  Aligned_cols=264  Identities=25%  Similarity=0.405  Sum_probs=205.2

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      +....+++.+.||+|+||.||+|.....  ......||||+++.... .....+.+|+++++.+ +|+||++++++|.+.
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            4455677889999999999999986432  23446799999975322 2234688999999999 899999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhcc----------------------------------------------------------
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN----------------------------------------------------------  613 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~----------------------------------------------------------  613 (813)
                      ...++||||+++|+|.+++...                                                          
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            9999999999999999988532                                                          


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          614 ------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       614 ------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                                  ..+++..+++++.||++||.|||+   .+|+||||||+|||+++++.+||+|||+++...........
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence                        136788889999999999999995   59999999999999999999999999999866443222212


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....++..|+|||++.+..++.++||||||+++|||++ |+.||........  .    ....... .    ..    ..
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~----~~~~~~~-~----~~----~~  336 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--F----YKMVKRG-Y----QM----SR  336 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--H----HHHHHcc-c----Cc----cC
Confidence            23345678999999998899999999999999999997 9999975432211  0    0111100 0    00    00


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ....+..+.+++.+||+.||.+||++.+|+++|++++
T Consensus       337 ~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         337 PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            1112467889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-37  Score=303.39  Aligned_cols=235  Identities=29%  Similarity=0.331  Sum_probs=199.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||.|+||.|.++...   ..+..+|+|++++..--   ..+...+|..+|+.+.||.++++.+.+.+.+..+||
T Consensus        46 fe~~~tlGtGSFGrV~LVr~k---~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   46 FERLKTLGTGSFGRVHLVREK---HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhheeeeccCccceEEEEEEc---cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            456688999999999998774   56889999999764322   234567899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|.|..+|+...++++...+-++.||+.||+|||   +.+|++|||||+|||||.+|.+||+|||+|+.....  
T Consensus       123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r--  197 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR--  197 (355)
T ss_pred             EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence            999999999999999999999999999999999999999   569999999999999999999999999999987533  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         ..+.+||+.|+|||.++.+.+...+|.|||||++|||+.|.+||.......       .+        ++++...+.
T Consensus       198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~-------iY--------~KI~~~~v~  259 (355)
T KOG0616|consen  198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ-------IY--------EKILEGKVK  259 (355)
T ss_pred             ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH-------HH--------HHHHhCccc
Confidence               456889999999999999999999999999999999999999998665411       11        223333333


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCC
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLR  783 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~R  783 (813)
                      .+  .-....+.+|+...|+.|-.+|
T Consensus       260 fP--~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  260 FP--SYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             CC--cccCHHHHHHHHHHHhhhhHhh
Confidence            22  1234667788888888888888

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.1e-37  Score=327.91  Aligned_cols=246  Identities=28%  Similarity=0.420  Sum_probs=208.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.+.||+|.||.||||.-+   .+.+.||+|.+.+..  ++..+.+.+|++++++++|||||.+++.|+...++++|.
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK---~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRK---YTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             hhHHHHhcCCccceeeecccc---cceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            556789999999999999763   467899999987642  233456889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+.+ +|..+|.....++++.+..++.+++.||.|||   +.+|.|||+||+|||++..+++|++|||+|+.+..+.  
T Consensus        81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t--  154 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT--  154 (808)
T ss_pred             hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCc--
Confidence            99988 99999999999999999999999999999999   5599999999999999999999999999999877543  


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .+.+.+.||+-|||||.+.+.+++..+|.||+||++||+.+|++||....      +...+.....         .....
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~---------d~v~~  219 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILK---------DPVKP  219 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhc---------CCCCC
Confidence            33677899999999999999999999999999999999999999997432      1111111111         11111


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        +.+....+..++...|++||.+|.+..+++.+
T Consensus       220 --p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  220 --PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             --cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence              22456788899999999999999999999865

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.4e-37  Score=330.02  Aligned_cols=253  Identities=25%  Similarity=0.342  Sum_probs=210.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.+-||.|+-|.|-.|+..   .+|+.+|||.+.+..   ......+.+|+.+|+.+.|||++++++++++.+++|||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~---~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHA---ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             eeccccccCCCCceehhhhcc---cccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            456788999999999998874   578999999997642   22234588999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      .||+++|.|.+++-.++.+++.+..+++.||+.|+.|+|.   .+|+||||||+|+|||..+++||+|||+|.+-.++. 
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk-  166 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK-  166 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc-
Confidence            9999999999999999999999999999999999999995   499999999999999999999999999998755432 


Q ss_pred             cceeecccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTIT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                        .....+|.+.|.+||++.+.+|+ .++||||+|||||.||||+.||+.+.-   ..+.    ..+..+..+       
T Consensus       167 --lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---r~LL----lKV~~G~f~-------  230 (786)
T KOG0588|consen  167 --LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---RVLL----LKVQRGVFE-------  230 (786)
T ss_pred             --cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---HHHH----HHHHcCccc-------
Confidence              24567899999999999999885 589999999999999999999984331   1111    111122111       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH--hcCcCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML--EGVVEV  799 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L--~~~~~~  799 (813)
                       .  +...+.++.+|+.+|+..||++|.|++||+++-  .+...+
T Consensus       231 -M--Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  231 -M--PSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             -C--CCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence             1  123457788999999999999999999999874  444433

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2e-35  Score=367.57  Aligned_cols=269  Identities=27%  Similarity=0.517  Sum_probs=212.8

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE  590 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  590 (813)
                      ++++++... ....+.||+|+||.||+|...   .++..||||+++....    ....|++++++++|||||+++++|.+
T Consensus       683 ~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~  754 (968)
T PLN00113        683 ITINDILSS-LKEENVISRGKKGASYKGKSI---KNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS  754 (968)
T ss_pred             hhHHHHHhh-CCcccEEccCCCeeEEEEEEC---CCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc
Confidence            444454433 234467999999999999874   3568899999865322    22345788999999999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ++..++||||+++|+|.++++   .++|..+.+++.|||+||+|||+.+..+|+||||||+||+++.++.+++. |+.+.
T Consensus       755 ~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~  830 (968)
T PLN00113        755 EKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG  830 (968)
T ss_pred             CCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence            999999999999999999996   37899999999999999999998778899999999999999999988876 66654


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .....      ....++..|+|||++.+..++.++|||||||++|||++|+.|++...+. ...+.+|+...........
T Consensus       831 ~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~  903 (968)
T PLN00113        831 LLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLDM  903 (968)
T ss_pred             ccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCccchhh
Confidence            43221      1235789999999999999999999999999999999999999654332 2234455554444444445


Q ss_pred             cccccccc--cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          751 LVEGDMEA--LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       751 ~~~~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+++.+..  ....++..++.+++.+||+.||++||||.||+++|+++..
T Consensus       904 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             eeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            55554432  2234567788999999999999999999999999998765

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.1e-36  Score=330.11  Aligned_cols=264  Identities=21%  Similarity=0.303  Sum_probs=205.8

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...+++.++||+|+||.||++...   ..+..+|+|.+.... ....+++.+|++++++++|+||+++++++..++..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHK---PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEEC---CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            445677789999999999999874   356789999886532 2234568999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..+..++.|++.||.|||+.  .+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  158 (331)
T cd06649          81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (331)
T ss_pred             EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence            999999999999998888889999999999999999999952  369999999999999999999999999997654321


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC---c------
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE---K------  747 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~------  747 (813)
                          .....|+..|+|||++.+..++.++|||||||++|||++|+.||......+....   ........   .      
T Consensus       159 ----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  231 (331)
T cd06649         159 ----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI---FGRPVVDGEEGEPHSISP  231 (331)
T ss_pred             ----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---hcccccccccCCccccCc
Confidence                2335689999999999998999999999999999999999999965432211100   00000000   0      


Q ss_pred             -------------------------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          748 -------------------------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       748 -------------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                                               ...+................+.+++.+||+.||++|||+.|++++-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                                     0000000000001113456789999999999999999999999774

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-36  Score=291.98  Aligned_cols=245  Identities=27%  Similarity=0.361  Sum_probs=206.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .++.+.||+|-||.||.|..+   +..-.||+|++.+.   ..+..+++.+|+++-+.|+||||+++++++.+....+|+
T Consensus        24 feigr~LgkgkFG~vYlarek---ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREK---KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             ccccccccCCccccEeEeeec---cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            456789999999999999874   46778999999653   234457899999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhh--ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~--~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||.+.|+|...|+  ...++++.....++.|+|.||.|+|   .++|+||||||+|+|++..+..||+|||-+.....+
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN  177 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence            99999999999998  5577899999999999999999999   569999999999999999999999999999865422


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .    ....+||..|++||...+...+..+|+|++|++.||++.|.+||+.....+ +..+        .   -.++..+
T Consensus       178 k----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI--------~---k~~~~~p  242 (281)
T KOG0580|consen  178 K----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRI--------R---KVDLKFP  242 (281)
T ss_pred             C----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHH--------H---HccccCC
Confidence            1    456789999999999999999999999999999999999999998654321 1111        0   0111111


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                             ......+.+++.+|+..+|.+|.+..|++.+-
T Consensus       243 -------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  243 -------STISGGAADLISRLLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             -------cccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence                   23457788999999999999999999998763

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-37  Score=325.49  Aligned_cols=265  Identities=28%  Similarity=0.409  Sum_probs=221.7

Q ss_pred             HHHHHHHHhhcccccceeeeeeEEEEEEecc-CCcceEEEEEEeec-cccccchhhhheeeeeeccccCCcceEEeEeec
Q 045343          513 YKELEEATDNFKEEVGRGSFGIVYKGVILTT-RTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE  590 (813)
Q Consensus       513 ~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~-~~~~~~vavK~l~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  590 (813)
                      --+|.++...+.+.||.|.||.||+|+.... ++..-.||||..+. ......+.|..|..+|+.++|||||+|+|.|.+
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            3456666677788999999999999998765 45566799999986 344556779999999999999999999999965


Q ss_pred             CCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                       +..++|||.++-|.|..||+.+ ..++......++.||+.+|+|||   +..+|||||..+|||+....-+||+|||++
T Consensus       463 -~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLS  538 (974)
T KOG4257|consen  463 -QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLS  538 (974)
T ss_pred             -cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchh
Confidence             5789999999999999999875 56888888999999999999999   679999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      +.+..+.... .+...-..-|||||.+.-..++.++|||.|||++||+++ |..||.+....+                +
T Consensus       539 R~~ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------V  601 (974)
T KOG4257|consen  539 RYLEDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------V  601 (974)
T ss_pred             hhccccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------e
Confidence            9987655443 233445678999999999999999999999999999988 999997543211                1


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      --.++...+.+.+..|+..|..++.+||..+|.+||.+.|+...|..+.+
T Consensus       602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            11233334445566889999999999999999999999999998877665

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.8e-36  Score=321.48  Aligned_cols=258  Identities=30%  Similarity=0.472  Sum_probs=206.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||+|......  .....|++|.++.... ....++.+|+.++.+++|+||+++++++......++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            4567789999999999999875432  2346799999864322 234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          597 VYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      +|||+++++|.+++...                ..+++..++.++.|+++||.|||+   .+++|+||||+||++++++.
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence            99999999999998653                346788899999999999999995   49999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  739 (813)
                      +||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+.       
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-------  235 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-------  235 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-------
Confidence            99999999987644332222233456788999999988889999999999999999998 9999875433221       


Q ss_pred             HHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ...+.......         ....++.++.+++.+||+.||.+||++.||+++|+.+
T Consensus       236 ~~~i~~~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         236 IEMIRSRQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHHcCCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            11111111111         1224568899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-37  Score=321.57  Aligned_cols=246  Identities=26%  Similarity=0.382  Sum_probs=208.5

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      -.+.||+|.||.||||...   ..++.||+|.+.... ....++++.|+.++.+++++||.++++.+..+..++++|||+
T Consensus        17 ~~~~IgrGsfG~Vyk~~d~---~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   17 KLELIGRGSFGEVYKAIDN---KTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             cchhccccccceeeeeeec---cccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            3478999999999999885   467899999997543 233467899999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      .+|++.+.|.....+++..+.-++.++..||.|||.+   +.+|||||+.|||+..++.+||+|||.+..+......  .
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r--r  168 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR--R  168 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc--c
Confidence            9999999999888888888888999999999999955   9999999999999999999999999999988766554  3


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ..++||+.|||||++....|+.|+||||||++.+||++|.+|+....+..                +.-++...-.....
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------------vlflIpk~~PP~L~  232 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------------VLFLIPKSAPPRLD  232 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------EEEeccCCCCCccc
Confidence            56889999999999998899999999999999999999999997443211                11122211111222


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+...+.+++..||+.||+.||++.+++++
T Consensus       233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  233 GDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            3567889999999999999999999999864

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-36  Score=318.05  Aligned_cols=260  Identities=25%  Similarity=0.415  Sum_probs=207.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||+|.+.....+...||||.++.... ....+|.+|+.++++++|+||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            446678899999999999999865544567899999865332 2345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++++|.+++... ..+++..+++++.|++.||+|||+   .+|+|+||||+||++++++.++|+|||+++......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            9999999999999654 468999999999999999999995   599999999999999999999999999999875322


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .........++..|+|||.+.+..++.++||||||+++|||++ |..||.......   +....    ....        
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~----~~~~--------  225 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAV----EDGY--------  225 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHH----HcCC--------
Confidence            2211222345678999999998889999999999999999998 999885433221   11111    1100        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                       .......+++.+.+++.+||+.+|++||++.||+++|++++
T Consensus       226 -~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~  266 (266)
T cd05033         226 -RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI  266 (266)
T ss_pred             -CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             00011234577899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-36  Score=316.43  Aligned_cols=260  Identities=23%  Similarity=0.302  Sum_probs=206.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---------cc-----chhhhheeeeeeccccCCcceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---------DG-----EKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---------~~-----~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      .+|++.++||+|.||.|-+|...   .+++.||||++.+...         ..     .+...+||.+|++++|+|||+|
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~---~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDE---VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             hheehhhhhcCCccceEEEEeec---CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            35677789999999999998764   4778999999965311         11     1367899999999999999999


Q ss_pred             EeEeecC--CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEE
Q 045343          585 LGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR  662 (813)
Q Consensus       585 ~g~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~k  662 (813)
                      +.+..+.  +.+|||+|||..|.+...=-....++..+.++++.++..||+|||.+   +||||||||+|+||++++++|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEE
Confidence            9998654  57899999999998765433344489999999999999999999955   999999999999999999999


Q ss_pred             EeeccCccccccC---cccceeecccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhh
Q 045343          663 ISDFGLAKLLTLN---QSKAIRTAIRGTKGYVAPEWFRNST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL  735 (813)
Q Consensus       663 l~DfGla~~~~~~---~~~~~~~~~~gt~~y~aPE~l~~~~----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l  735 (813)
                      |+|||.+......   .........+||+.|+|||...+..    .+.+.||||+||+||-|+.|+.||-.+..-+    
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~----  326 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE----  326 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH----
Confidence            9999999866322   1122234478999999999987732    3568999999999999999999997543211    


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                                 ..++++...+..+...+..+.+.+|++++|++||+.|.+..+|..+.--....
T Consensus       327 -----------l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  327 -----------LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             -----------HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence                       12334445555555556788999999999999999999999999988554443

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.1e-36  Score=335.13  Aligned_cols=263  Identities=22%  Similarity=0.353  Sum_probs=204.5

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeeccc-cCCcceEEeEeecCCc
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQN  593 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~  593 (813)
                      ...+.+.++||+|+||.||+|......  .....||||+++.... ...+.+.+|+++++++. ||||+++++++.+...
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            445667799999999999999864321  2345799999965322 22356889999999996 9999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhcc------------------------------------------------------------
Q 045343          594 RLLVYEFLNNGTLASFLFGN------------------------------------------------------------  613 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~------------------------------------------------------------  613 (813)
                      .+|||||+++|+|.++|...                                                            
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            99999999999999987532                                                            


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          614 ------------------------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       614 ------------------------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                                                          ..+++..+.+++.||++||.|||+   .+|+|+||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence                                                136777888999999999999995   59999999999999999


Q ss_pred             CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhH
Q 045343          658 YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILT  736 (813)
Q Consensus       658 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~  736 (813)
                      ++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.........   
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~---  349 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF---  349 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH---
Confidence            99999999999987644322221223446788999999998889999999999999999997 88988643221110   


Q ss_pred             HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         ......+.         ........+..+.+++.+||+.+|++||++.+|+++|+.+.+
T Consensus       350 ---~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         350 ---YNKIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             ---HHHHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence               01111110         001112345788999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-36  Score=327.42  Aligned_cols=251  Identities=22%  Similarity=0.287  Sum_probs=203.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.++||+|+||.||+|...   ..+..||||+++...   ....+.+..|+.++.+++|+||+++++++.+++..++|
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   79 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKK---DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA   79 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence            567789999999999999874   356789999987532   12345678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~--  154 (333)
T cd05600          80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY--  154 (333)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccc--
Confidence            9999999999999888888999999999999999999995   49999999999999999999999999999865431  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                         .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... +..+      ...+..   +. 
T Consensus       155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~~~---~~-  221 (333)
T cd05600         155 ---ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW------KETLQR---PV-  221 (333)
T ss_pred             ---cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc------cccccC---CC-
Confidence               234568999999999999899999999999999999999999997654322111 1000      000000   00 


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...........+.+++.+||+.+|.+||++.+++++
T Consensus       222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            000012345778899999999999999999999976

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=6.9e-36  Score=317.91  Aligned_cols=260  Identities=26%  Similarity=0.452  Sum_probs=207.6

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ...++.+.+.||+|+||.||+|.....  ......||||.++..... ..+.+.+|++++++++|+||+++++++.....
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            345678889999999999999987533  234578999998765433 34679999999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC
Q 045343          594 RLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY  659 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~  659 (813)
                      .++||||+++++|.+++...              ..+++..+..++.||+.|+.|||+   .+++|+||||+||+++.++
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCC
Confidence            99999999999999998643              346788999999999999999995   4999999999999999999


Q ss_pred             CEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHH
Q 045343          660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDW  738 (813)
Q Consensus       660 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~  738 (813)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||.....++..   ..
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~---~~  236 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI---EC  236 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---HH
Confidence            999999999986543322111223345788999999999999999999999999999998 99998654332211   11


Q ss_pred             HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                          ...+....         .....+..+.+++.+||+.||++||++.||++.|++
T Consensus       237 ----~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         237 ----ITQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             ----HHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence                11111111         111345778999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=5.4e-36  Score=320.08  Aligned_cols=265  Identities=20%  Similarity=0.245  Sum_probs=202.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.+.||+|+||.||++...   ..+..+|||+++...  ....+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHK---ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             ceEEEEecccCCEEEEEEEEC---CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            567789999999999999874   356789999987532  223456788999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||++++.|..+......+++..++.++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||+++........
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  156 (287)
T cd07848          80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA  156 (287)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence            999998887666556678999999999999999999995   59999999999999999999999999999876433221


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH---------hhccCccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD---------CYRNEKLD  749 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~---------~~~~~~~~  749 (813)
                      . .....|+..|+|||++.+..++.++|||||||++|||++|+.||......+..........         ........
T Consensus       157 ~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07848         157 N-YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH  235 (287)
T ss_pred             c-ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence            1 2335689999999999988899999999999999999999999976443221111000000         00000000


Q ss_pred             cccccccccc------ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEAL------NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....+.....      .....+..+.+++.+||+.||++|||++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000100000      011235678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3.6e-36  Score=327.07  Aligned_cols=243  Identities=23%  Similarity=0.272  Sum_probs=198.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.||+|+||.||++...   .+++.+|||+++...   ......+.+|+.++++++|+||+++++++...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   77 (323)
T cd05571           1 KLLGKGTFGKVILVREK---ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCC
Confidence            46999999999999874   367889999987532   222345778999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  .
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~  152 (323)
T cd05571          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--M  152 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--c
Confidence            999999999888889999999999999999999995   59999999999999999999999999998754322111  2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....+...   .    ....+..        .  ..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~----~~~~~~~--------~--~p  215 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---E----LILMEEI--------R--FP  215 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHH---H----HHHcCCC--------C--CC
Confidence            3456999999999999999999999999999999999999999754322111   0    0111100        0  01


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ......+.+++.+||+.||++||     ++.+++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            12356788999999999999999     79998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1e-35  Score=316.24  Aligned_cols=265  Identities=20%  Similarity=0.277  Sum_probs=211.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.++||+|+||+||++.-.   ..+..+|+|++++..   ....+.++.|-.+|....++.||+|+-.|.+.+.+|||
T Consensus       143 Fe~Lk~IgkGAfGeVrLarKk---~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  143 FELLKVIGKGAFGEVRLARKK---DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             chhheeeccccceeEEEEEEc---cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            345578999999999998763   578899999998643   22345678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC--
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN--  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~--  675 (813)
                      |||++||++..+|.....+++.....++.+++-|+.-||+.   |+|||||||+|+|||..|++||+||||+.-+...  
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~  296 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR  296 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence            99999999999999999999999999999999999999964   9999999999999999999999999998533110  


Q ss_pred             --------------------cccc---e--------------------eecccccccccCcccccCCCCCCccchhhHHH
Q 045343          676 --------------------QSKA---I--------------------RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGV  712 (813)
Q Consensus       676 --------------------~~~~---~--------------------~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gv  712 (813)
                                          ....   .                    ....+|||.|+|||++.+..++..+|.|||||
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~  376 (550)
T KOG0605|consen  297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC  376 (550)
T ss_pred             hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence                                0000   0                    01247999999999999999999999999999


Q ss_pred             HHHHHHhCCcCCCcccch-hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC---HHH
Q 045343          713 LLLEIISCRKSFDIEMGE-EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKK  788 (813)
Q Consensus       713 vl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~e  788 (813)
                      ||||||.|-+||..+.+. ....+..|...+..              +.......+..+||.+|+. ||++|.-   ++|
T Consensus       377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E  441 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------PEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE  441 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------CCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence            999999999999987663 34444444322211              1122334788899999998 9999975   667


Q ss_pred             HHHH-------HhcCcCCCCCCCCC
Q 045343          789 VLQM-------LEGVVEVSLPPNPY  806 (813)
Q Consensus       789 vl~~-------L~~~~~~~~p~~p~  806 (813)
                      |.++       .+.+.+.+.|=.|.
T Consensus       442 IK~HPfF~~v~W~~l~~~~apfvP~  466 (550)
T KOG0605|consen  442 IKKHPFFKGVDWDHLREMPAPFVPQ  466 (550)
T ss_pred             HhcCCccccCCcchhhcCCCCCCCC
Confidence            6654       34455666444443

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-37  Score=326.37  Aligned_cols=264  Identities=28%  Similarity=0.390  Sum_probs=219.3

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE  590 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~  590 (813)
                      ..--|+++....+.++||-|.||.||.|++++   -...||||.|+.. .-..++|..|..+|+.++|||+|+|+|+|..
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk---yslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~  334 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH  334 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeec---cceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence            34445666666778899999999999999963   4568999999864 3346789999999999999999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      +-.+|||+|||..|+|.+||...  ..++--..+.++.||+.|+.||.   ..++|||||.++|.|+.++..+||+|||+
T Consensus       335 EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGL  411 (1157)
T KOG4278|consen  335 EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGL  411 (1157)
T ss_pred             CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccch
Confidence            99999999999999999999754  45667778899999999999999   45999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ++++..+.... .....-..-|.|||-+....++.|+|||+|||+||||.| |..|+.+..-       ..+        
T Consensus       412 sRlMtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-------SqV--------  475 (1157)
T KOG4278|consen  412 SRLMTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQV--------  475 (1157)
T ss_pred             hhhhcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-------HHH--------
Confidence            99987654322 222234567999999999999999999999999999998 8888764321       111        


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                       -.+++...+......|++.+.+||+.||+.+|.+||++.|+.+.+|.+..
T Consensus       476 -Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  476 -YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             -HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence             22334444555566789999999999999999999999999999988654

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=7.1e-36  Score=325.98  Aligned_cols=268  Identities=20%  Similarity=0.314  Sum_probs=204.4

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      +....|++.++||+|+||.||++...   .++..+|+|.++... .....++.+|++++++++|+||+++++++.+++..
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHK---PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI   78 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEEC---CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEE
Confidence            44566788899999999999999874   356788999876532 22335688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||||+++++|.+++.....+++.....++.|+++||.|||+  ..+|+|+||||+|||++.++.+||+|||++.....
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  156 (333)
T cd06650          79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (333)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence            9999999999999999888888999999999999999999995  23799999999999999999999999999876533


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh-hccC-------
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC-YRNE-------  746 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-~~~~-------  746 (813)
                      ..    .....|+..|+|||++.+..++.++|||||||++|||++|+.||.................. ....       
T Consensus       157 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (333)
T cd06650         157 SM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR  232 (333)
T ss_pred             hc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence            21    23356899999999999888999999999999999999999999754321111000000000 0000       


Q ss_pred             c-----------------c----cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 K-----------------L----DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~-----------------~----~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .                 .    ..+...............++.+++.+||+.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence            0                 0    00000000000011134678899999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=313.16  Aligned_cols=256  Identities=27%  Similarity=0.438  Sum_probs=205.4

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +....+++.+.||+|++|.||+|...    .+..||||.++.. ....+++.+|+.++++++|+||+++++++...+..+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~----~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN----NTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY   77 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec----CCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence            44566788899999999999999864    3467999998653 233567899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      +||||+++++|.+++....  .+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++...
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068          78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            9999999999999997654  68999999999999999999995   499999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... ......+..|+|||.+.+..++.++||||||++++||++ |+.||.........       ...... .    
T Consensus       155 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-------~~~~~~-~----  221 (261)
T cd05068         155 EDIYEA-REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL-------QQVDQG-Y----  221 (261)
T ss_pred             CCcccc-cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-------HHHHcC-C----
Confidence            322111 111223458999999998899999999999999999999 99998654322110       111000 0    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                          ........++.+.+++.+|++.+|.+||++.++++.|+.+
T Consensus       222 ----~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         222 ----RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             ----CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence                0011123457789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.3e-36  Score=327.30  Aligned_cols=262  Identities=26%  Similarity=0.405  Sum_probs=203.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeec-CCc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE-GQN  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~  593 (813)
                      ..+++.+.||+|+||.||+|....  ....++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|.. +..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            457788999999999999997543  223457899999875322 2234677899999999 89999999998865 456


Q ss_pred             eEEEEeecCCCchhhhhhcc------------------------------------------------------------
Q 045343          594 RLLVYEFLNNGTLASFLFGN------------------------------------------------------------  613 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~------------------------------------------------------------  613 (813)
                      .++++||+++++|.+++...                                                            
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            88999999999999988532                                                            


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccC
Q 045343          614 -LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA  692 (813)
Q Consensus       614 -~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~a  692 (813)
                       ..++|..+.+++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.+.............++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence             257899999999999999999995   4999999999999999999999999999987654332221233456778999


Q ss_pred             cccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHH
Q 045343          693 PEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMV  771 (813)
Q Consensus       693 PE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  771 (813)
                      ||++.+..++.++|||||||++|||++ |..||......+.  +.    .........         .........+.++
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~----~~~~~~~~~---------~~~~~~~~~~~~l  308 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FC----RRLKEGTRM---------RAPEYATPEIYSI  308 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HH----HHHhccCCC---------CCCccCCHHHHHH
Confidence            999999999999999999999999998 9999865332111  11    111111000         0011235678999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          772 SIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       772 ~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      +.+||+.+|++||++.||+++|+++++
T Consensus       309 ~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         309 MLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.2e-35  Score=317.13  Aligned_cols=250  Identities=25%  Similarity=0.275  Sum_probs=199.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +...+.||+|+||.||++...   .+++.||||.+....   ......+.+|+.++.+++|+||+++++++.+++..++|
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEe---cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEE
Confidence            456688999999999999875   356799999986432   12234578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||+++|+|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+|||+++++.+||+|||++......
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            9999999999888643  468899999999999999999995   59999999999999999999999999999875432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....|+..|+|||++.+..++.++|||||||++|||++|+.||..........   ........        ..
T Consensus       156 ~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~---~~~~~~~~--------~~  221 (285)
T cd05631         156 ET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE---EVDRRVKE--------DQ  221 (285)
T ss_pred             Ce---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH---HHHHHhhc--------cc
Confidence            21   234568999999999999999999999999999999999999997543321110   00010100        00


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      .  .........+.+|+.+||+.||.+||+     +++++++
T Consensus       222 ~--~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         222 E--EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             c--cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            0  011123567889999999999999997     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=9.3e-36  Score=319.00  Aligned_cols=261  Identities=24%  Similarity=0.440  Sum_probs=208.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.+.||+|+||.||+|.....  ..+...+++|.++.......+.+.+|+.++++++|+||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            4456678999999999999986432  23456789999876554455678999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          597 VYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      ||||+++++|.+++...                ..+++..++.++.||+.||+|||+   .+|+||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            99999999999998643                247899999999999999999995   49999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  739 (813)
                      ++|+|||++................++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.       
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-------  234 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV-------  234 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-------
Confidence            99999999976544322221233456788999999998899999999999999999999 9999865433221       


Q ss_pred             HHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+..........         ....+..+.+++.+||+.+|++||++++|+++|+++..
T Consensus       235 ~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         235 IECITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            111111111110         11235678899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1e-35  Score=318.17  Aligned_cols=263  Identities=24%  Similarity=0.445  Sum_probs=209.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...+.+.+.||+|+||.||++.....  ..+...+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            44566778999999999999976431  2345678999987655455667999999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccC-------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEE
Q 045343          596 LVYEFLNNGTLASFLFGNL-------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR  662 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~-------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~k  662 (813)
                      +|+||+++++|.+++....             .+++..++.++.|++.||+|||+   .+++||||||+||++++++.+|
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEE
Confidence            9999999999999986432             47899999999999999999995   4999999999999999999999


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||+++...............++..|+|||.+.+..++.++||||||++++||++ |..||......+.   .    .
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~---~----~  233 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---I----E  233 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H----H
Confidence            999999986643322221223345778999999998889999999999999999998 8988865432211   0    1


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ....+.....         ....+..+.+++.+||+.+|.+|||+.||++.|+++...
T Consensus       234 ~i~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         234 CITQGRVLQR---------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHHcCCcCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            1111111100         112346789999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-36  Score=322.69  Aligned_cols=244  Identities=25%  Similarity=0.238  Sum_probs=200.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.++||+|+||.||+|...   .+++.+|||++....   ....+.+.+|+.++++++||||+++++++.++...++|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDR---ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEc---CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence            567789999999999999874   356789999986432   12345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++.....++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--  154 (291)
T cd05612          80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--  154 (291)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence            9999999999999888889999999999999999999995   59999999999999999999999999999876432  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         .....|++.|+|||++.+..++.++|||||||++|||++|+.||......+..       .......        ..
T Consensus       155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~-------~~i~~~~--------~~  216 (291)
T cd05612         155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIY-------EKILAGK--------LE  216 (291)
T ss_pred             ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhCC--------cC
Confidence               22346899999999999988999999999999999999999999754332110       1111110        10


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      .  .......+.+++.+||+.||.+||+     ++|++++
T Consensus       217 ~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         217 F--PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             C--CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            0  1122457889999999999999995     8888876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.3e-35  Score=312.86  Aligned_cols=256  Identities=28%  Similarity=0.408  Sum_probs=205.3

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ....+.+.++||+|++|.||+|...   ..+..+++|.++.. ....+++.+|++++++++|+||+++++++..+...++
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052           4 ERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             chHHeEEeeecCCcccceEEEEEEe---cCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEE
Confidence            3445667889999999999999875   35678999998643 3335678999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||||+++++|.+++...  ..+++..++.++.|+++||+|||+   .+++|+||||+||++++++.+||+|||++.....
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            99999999999998653  457899999999999999999995   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... ......+..|+|||.+.+..++.++||||||+++|||++ |..|+.....++..       ......       
T Consensus       157 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-------~~~~~~-------  221 (263)
T cd05052         157 DTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-------ELLEKG-------  221 (263)
T ss_pred             ceeec-cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------HHHHCC-------
Confidence            32211 112234668999999998899999999999999999998 89998654322211       111110       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                        .........+..+.+++.+||+.+|++||++.+++++|+.+
T Consensus       222 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         222 --YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence              00011112357789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.7e-36  Score=326.29  Aligned_cols=246  Identities=22%  Similarity=0.264  Sum_probs=201.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+++.+.||+|+||.||+|...   .+++.||||.++...   ....+.+.+|+.++++++||||+++++++.+++..+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHK---GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY   94 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence            44678899999999999999874   356789999986532   123456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            999999999999999888888999999999999999999995   59999999999999999999999999999876432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                           .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........       ......+.        
T Consensus       172 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------~~~i~~~~--------  231 (329)
T PTZ00263        172 -----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI-------YEKILAGR--------  231 (329)
T ss_pred             -----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH-------HHHHhcCC--------
Confidence                 1234689999999999999999999999999999999999999975432110       11111111        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      ...  +......+.+++.+||+.||.+||+     +++++++
T Consensus       232 ~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        232 LKF--PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             cCC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            110  1112456789999999999999997     6888755

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.1e-35  Score=317.04  Aligned_cols=259  Identities=28%  Similarity=0.434  Sum_probs=204.2

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...+++.++||+|+||.||+|.... +......+++|.++... .....++.+|+.++++++|+||+++++++..++..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            3456788999999999999998632 22356789999987432 223356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc-----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC
Q 045343          596 LVYEFLNNGTLASFLFGN-----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY  658 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~  658 (813)
                      +||||+++++|.+++...                 ..+++...+.++.|++.||.|||+   .+++|+||||+|||++++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~  160 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCC
Confidence            999999999999998522                 246788899999999999999995   499999999999999999


Q ss_pred             CCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHH
Q 045343          659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTD  737 (813)
Q Consensus       659 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~  737 (813)
                      +.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||......+.   . 
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~---~-  236 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV---I-  236 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---H-
Confidence            9999999999987654332222233446778999999988889999999999999999998 8888865432111   1 


Q ss_pred             HHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                         +.........         ........+.+++.+||+.+|.+||++.+|+++|.+
T Consensus       237 ---~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         237 ---EMVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ---HHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence               1111111100         111235678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1e-35  Score=322.52  Aligned_cols=263  Identities=25%  Similarity=0.407  Sum_probs=205.2

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCC-cceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRT-STTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      +....++..+.||+|+||.||+|.+..+.. ....||||.++... ....+++.+|+.+++.++|+||++++++|... .
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            344556777899999999999998753322 23458999986432 23346788999999999999999999999764 5


Q ss_pred             eEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..+|+||+++|+|.+++... ..+++..+++++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccc
Confidence            78999999999999999764 467899999999999999999995   59999999999999999999999999999877


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..       .......  ..
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-------~~~~~~~--~~  230 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-------SILEKGE--RL  230 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-------HHHhCCC--CC
Confidence            64433221222334678999999999999999999999999999998 99998754322211       1111110  00


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                             .....+...+.+++.+||+.+|.+||++.+++..|..+..
T Consensus       231 -------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         231 -------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             -------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence                   0111234578899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=9.4e-36  Score=323.77  Aligned_cols=246  Identities=24%  Similarity=0.284  Sum_probs=199.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||++....+...++.||||.++...    ......+.+|+.++++++||||+++++.+..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            67999999999999876555678899999987532    12234577899999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|.+++.....+.+..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--  156 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV--  156 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc--
Confidence            9999999999888888899999999999999999995   59999999999999999999999999998754332221  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....|++.|+|||++.+..++.++||||||+++|||++|+.||.........      .... ...        ..  .
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~------~~~~-~~~--------~~--~  219 (323)
T cd05584         157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI------DKIL-KGK--------LN--L  219 (323)
T ss_pred             ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH------HHHH-cCC--------CC--C
Confidence            23456899999999999888999999999999999999999999754322110      0111 110        00  0


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .......+.+++.+||+.+|++||     ++.+++++
T Consensus       220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            112346788999999999999999     78888764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.9e-35  Score=311.17  Aligned_cols=255  Identities=27%  Similarity=0.417  Sum_probs=204.1

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ....+.+.++||+|+||.||+|...    ++..||+|.+... ....+.+.+|+.++++++|+||+++++.+.+.+..++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~----~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec----CCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            3455677899999999999999864    4457999987643 2235678999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      |+||+++++|.+++...  ..+++..++.++.|+++||+|||+   .+++|+||||+||+++.++.++|+|||+++....
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence            99999999999999653  567899999999999999999995   4999999999999999999999999999987653


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... .....++..|+|||.+....++.++||||||+++|||++ |+.||........   .........        .
T Consensus       156 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~~~~~~--------~  223 (261)
T cd05072         156 NEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV---MSALQRGYR--------M  223 (261)
T ss_pred             Cceec-cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH---HHHHHcCCC--------C
Confidence            32211 222345678999999988889999999999999999998 9999865432211   111111000        0


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                           ......+..+.+++.+|++.+|++||+++++.+.|+++
T Consensus       224 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         224 -----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence                 01112356788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.4e-35  Score=323.03  Aligned_cols=243  Identities=24%  Similarity=0.283  Sum_probs=197.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.||+|+||.||++...   ..+..+|||+++...   ......+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~   77 (328)
T cd05593           1 KLLGKGTFGKVILVREK---ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYV   77 (328)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCC
Confidence            46899999999999874   467889999997532   223456788999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  .
T Consensus        78 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~  152 (328)
T cd05593          78 NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT--M  152 (328)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc--c
Confidence            999999999888889999999999999999999995   59999999999999999999999999998764322111  2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..       ........      .+    .
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~-------~~~~~~~~------~~----p  215 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-------ELILMEDI------KF----P  215 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH-------HHhccCCc------cC----C
Confidence            3456899999999999889999999999999999999999999754322111       00000000      00    1


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ......+.+++.+||+.||.+||     ++.|++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            12356788999999999999997     89999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-36  Score=290.80  Aligned_cols=261  Identities=25%  Similarity=0.293  Sum_probs=212.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC-----c
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----N  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~  593 (813)
                      ..|.+.++||+|||+-||.++..   .++..+|+|++.....++.+..++|++..++++|||+++++++...+.     .
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~---s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGL---STGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             ceEEEeeeecCCCceeeeeeccc---CcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            45778899999999999998753   467789999998777677888999999999999999999999885433     4


Q ss_pred             eEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      .+|+++|...|+|.+.+..    ...+++..++.|+.+|++||.+||+. .+.++||||||.|||+.+.+.++|.|||.+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence            8999999999999999864    34689999999999999999999976 446999999999999999999999999998


Q ss_pred             cccccCcccc-------eeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH
Q 045343          670 KLLTLNQSKA-------IRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       670 ~~~~~~~~~~-------~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  739 (813)
                      ....-.-...       .......|.-|.|||.+.   +...++++|||||||+||+|+.|..||+...+          
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------  246 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------  246 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----------
Confidence            7654221100       012234688999999885   44678999999999999999999999974322          


Q ss_pred             HHhhccCccc-ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          740 FDCYRNEKLD-DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       740 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                          ..+.+. .+..+.+..+.....++.+.+++.+|++.||.+||++.+++..++.++
T Consensus       247 ----~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  247 ----QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ----cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                111222 233344545555557899999999999999999999999999998764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-35  Score=304.95  Aligned_cols=265  Identities=23%  Similarity=0.324  Sum_probs=200.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeec--cccCCcceEEeEeecCC----ce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ--THHKNLVRLLGFCDEGQ----NR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~----~~  594 (813)
                      ..+.+.||+|.||+||+|.+     .|..||||++..   .+++.+.+|.++.+.  |+|+||+.+++.-..++    .+
T Consensus       213 I~L~e~IGkGRyGEVwrG~w-----rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRW-----RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             eEEEEEecCccccceeeccc-----cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence            34678899999999999998     678899999864   345677888887775  59999999999876555    57


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED-----CSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +||++|.++|||.|||.. ..++....++++..+|.||+|||-+     .++.|.|||||+.|||+..++.+.|+|+|||
T Consensus       285 wLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA  363 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  363 (513)
T ss_pred             EEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence            999999999999999987 6778899999999999999999954     4678999999999999999999999999999


Q ss_pred             cccccCcc--cceeecccccccccCcccccCCC----C--CCccchhhHHHHHHHHHhCC----------cCCCcccchh
Q 045343          670 KLLTLNQS--KAIRTAIRGTKGYVAPEWFRNST----I--TAKVDVYSFGVLLLEIISCR----------KSFDIEMGEE  731 (813)
Q Consensus       670 ~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~----~--~~k~DVwS~Gvvl~elltG~----------~p~~~~~~~~  731 (813)
                      .....+..  .......+||.+|||||++...-    +  -..+||||||.|+||+....          .||..-.+.+
T Consensus       364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D  443 (513)
T KOG2052|consen  364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD  443 (513)
T ss_pred             EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence            88765532  22234578999999999996532    2  23699999999999997432          3443221111


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      . ...+ ....+-...+...+..   ...+.+....+.++|+.||..+|..|.|+-.|.+.|.++.+.
T Consensus       444 P-s~ee-MrkVVCv~~~RP~ipn---rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  444 P-SFEE-MRKVVCVQKLRPNIPN---RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             C-CHHH-HhcceeecccCCCCCc---ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            0 0000 0011111111111111   122446788899999999999999999999999999887754

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-35  Score=321.94  Aligned_cols=241  Identities=25%  Similarity=0.289  Sum_probs=195.0

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||.||++...   ..+..||+|.++...   ......+.+|+.++.+++|+||+++++++.+.+..++||||+++
T Consensus         1 lg~G~~g~Vy~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   77 (312)
T cd05585           1 IGKGSFGKVMQVRKR---DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFING   77 (312)
T ss_pred             CCcCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCC
Confidence            799999999999874   356789999986432   23345678899999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeec
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      |+|.+++.....+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++........  ...
T Consensus        78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~  152 (312)
T cd05585          78 GELFHHLQREGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--TNT  152 (312)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc--ccc
Confidence            9999999888889999999999999999999995   59999999999999999999999999999864332211  234


Q ss_pred             ccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHH
Q 045343          684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK  763 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (813)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......+.      ...... .        ...  ....
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~------~~~~~~-~--------~~~--~~~~  215 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM------YRKILQ-E--------PLR--FPDG  215 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH------HHHHHc-C--------CCC--CCCc
Confidence            5689999999999999999999999999999999999999975432211      111111 0        000  0112


Q ss_pred             HHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 045343          764 CVEKLVMVSIWCIQEDPSLRPT---MKKVLQM  792 (813)
Q Consensus       764 ~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  792 (813)
                      ....+.+++.+||+.||.+||+   +.|++++
T Consensus       216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            3467889999999999999985   5666554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=8.6e-36  Score=325.78  Aligned_cols=249  Identities=23%  Similarity=0.274  Sum_probs=203.1

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ....+.+.+.||+|+||.||+|....  .....||+|++....   ....+.+.+|+.+++.++||||+++++++.++..
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~  105 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKN--EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY  105 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEEC--CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence            44457888999999999999998642  234689999986432   2234567889999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++||||+++|+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            99999999999999999888889999999999999999999995   599999999999999999999999999998764


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..     .....||+.|+|||++.+..++.++|||||||++|||++|+.||........       ......+..     
T Consensus       183 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-------~~~i~~~~~-----  245 (340)
T PTZ00426        183 TR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI-------YQKILEGII-----  245 (340)
T ss_pred             CC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH-------HHHHhcCCC-----
Confidence            32     2345689999999999988899999999999999999999999975432211       111111110     


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                         ..  +......+.+++.+||+.||.+|+     ++++++++
T Consensus       246 ---~~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        246 ---YF--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             ---CC--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence               00  111245678999999999999995     89998876

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-35  Score=311.58  Aligned_cols=256  Identities=26%  Similarity=0.431  Sum_probs=201.6

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCc------
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN------  593 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  593 (813)
                      .+.+.||+|+||.||+|.+..+......||||+++...  .....++.+|+..++.++|+||+++++++.+.+.      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            46688999999999999986554456789999987432  2234578899999999999999999999866554      


Q ss_pred             eEEEEeecCCCchhhhhhcc------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          594 RLLVYEFLNNGTLASFLFGN------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .++|+||+++++|..++...      ..+++.....++.|++.||.|||+   .+++|+||||+||++++++.+||+|||
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg  158 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFG  158 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcc
Confidence            79999999999999988432      357899999999999999999995   499999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      +++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......+   +...    ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~----~~~~  231 (273)
T cd05035         159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDY----LRHG  231 (273)
T ss_pred             ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcC
Confidence            9987654332211222335678999999988889999999999999999999 888886443221   1111    1111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....         ........+.+++.+||+.||.+||++.||++.|+++
T Consensus       232 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         232 NRLK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1110         1123456889999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.6e-35  Score=329.14  Aligned_cols=265  Identities=23%  Similarity=0.384  Sum_probs=205.2

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccc-cchhhhheeeeeeccc-cCCcceEEeEeec
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTH-HKNLVRLLGFCDE  590 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~g~~~~  590 (813)
                      ++....+.+.++||+|+||.||+|.+..  .......||||+++..... ..+.+..|++++.++. |+||+++++++..
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~  112 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK  112 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence            4455566677999999999999998743  2234568999999754222 2346889999999997 9999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhcc---------------------------------------------------------
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN---------------------------------------------------------  613 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~---------------------------------------------------------  613 (813)
                      ....++|+||+++|+|.++++..                                                         
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM  192 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence            99999999999999999998542                                                         


Q ss_pred             -----------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          614 -----------------------------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       614 -----------------------------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                                                               ..+++...++++.||+.||.|||+   .+++||||||+|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~N  269 (401)
T cd05107         193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARN  269 (401)
T ss_pred             hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcce
Confidence                                                     124667788899999999999994   599999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||......+
T Consensus       270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~  349 (401)
T cd05107         270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE  349 (401)
T ss_pred             EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence            9999999999999999986543222111223346788999999998889999999999999999998 888886433221


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      .  +    ......+.         ...........+.+++..||+.+|.+||+++||++.|++++
T Consensus       350 ~--~----~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         350 Q--F----YNAIKRGY---------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             H--H----HHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            1  0    01111110         00011123577899999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.3e-35  Score=322.58  Aligned_cols=243  Identities=24%  Similarity=0.264  Sum_probs=197.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.||+|+||.||++...   .++..||+|.++...   ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~   77 (323)
T cd05595           1 KLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCC
Confidence            46899999999999864   367889999987532   223345678999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|+|..++.....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  .
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~  152 (323)
T cd05595          78 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--M  152 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--c
Confidence            999999999888889999999999999999999995   59999999999999999999999999998754322111  2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....+....       ....+..        .  ..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~-------~~~~~~~--------~--~p  215 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE-------LILMEEI--------R--FP  215 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH-------HHhcCCC--------C--CC
Confidence            34568999999999999899999999999999999999999997543221110       0000000        0  01


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ......+.+++.+||+.||.+||     ++.+++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            12356788999999999999998     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.5e-35  Score=315.13  Aligned_cols=264  Identities=22%  Similarity=0.298  Sum_probs=197.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.++||+|+||.||+|...   .++..||+|+++.... .....+.+|+.++++++|+||+++++++..++..++||
T Consensus         6 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           6 TYVKLDKLGEGTYATVFKGRSK---LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             cceEeeEEecCCCEEEEEEEEC---CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            3667789999999999999874   3567899999864322 23446788999999999999999999999988999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++ +|.+++... ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        83 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          83 EYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             eCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            99985 888888654 457889999999999999999995   5999999999999999999999999999976543221


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH-----hhc----cCc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD-----CYR----NEK  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----~~~----~~~  747 (813)
                      .  .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+..........     .+.    ...
T Consensus       159 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07871         159 T--YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE  236 (288)
T ss_pred             c--ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence            1  233457899999998865 5688999999999999999999999976543322111100000     000    001


Q ss_pred             cccccccccccc----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEAL----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ......+.....    ........+.+++.+||+.||.+|||++|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            111111110000    001224567899999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.1e-35  Score=313.89  Aligned_cols=259  Identities=26%  Similarity=0.451  Sum_probs=201.5

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+++.++||+|+||.||+|.....  ......+|||+++... .....++.+|+.+++.++|+||+++++++.++...
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   84 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   84 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence            44577789999999999999986421  2345679999885432 12334688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEe
Q 045343          595 LLVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~  664 (813)
                      ++|+||+++++|.+++...          ..+++..+..++.|+++||.|||+   .+++|+||||+||++++++.++|+
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~  161 (277)
T cd05062          85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEEC
Confidence            9999999999999998642          235788899999999999999995   499999999999999999999999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhh
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      |||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....+...   .    ..
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~---~----~~  234 (277)
T cd05062         162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL---R----FV  234 (277)
T ss_pred             CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---H----HH
Confidence            9999986543322111122345778999999998889999999999999999999 78888644322111   1    11


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .......         .....+..+.+++.+||+.+|++|||+.|++++|++
T Consensus       235 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         235 MEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HcCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            1111111         011235678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.9e-35  Score=316.82  Aligned_cols=262  Identities=27%  Similarity=0.396  Sum_probs=206.2

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ....+++.+.||+|+||.||++......  .....+|+|.++... .....++.+|+.++.++ +|+||+++++++..+.
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            3445667789999999999999875432  345789999887532 22335688899999999 7999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhc----------------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          593 NRLLVYEFLNNGTLASFLFG----------------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~----------------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      ..++||||+++|+|.+++..                ...+++..+++++.|++.||.|||+   .+|+|+||||+|||++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence            99999999999999999853                2457899999999999999999995   4999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAIL  735 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l  735 (813)
                      +++.+||+|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |..|+.....++..  
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~--  244 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF--  244 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH--
Confidence            999999999999987654332211222345678999999988889999999999999999998 88888644322211  


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                           ........         ..........+.+++.+|++.+|++|||+.|+++.|++++
T Consensus       245 -----~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         245 -----KLLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -----HHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                 11111110         0111233567889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.2e-35  Score=314.67  Aligned_cols=259  Identities=27%  Similarity=0.382  Sum_probs=204.3

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+.+.++||+|+||.||+|....+  ......||||+++..... ..+.+.+|+.++.+++|+||+++++++.+....
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            45577889999999999999987542  234578999998754322 234688899999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC
Q 045343          595 LLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY  658 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~  658 (813)
                      ++++||+++++|.+++...                ..+++..+.+++.|++.||.|||+   .+|+||||||+||+++++
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCC
Confidence            9999999999999998521                246788899999999999999995   599999999999999999


Q ss_pred             CCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHH
Q 045343          659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTD  737 (813)
Q Consensus       659 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~  737 (813)
                      +.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..|+......+.     
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----  235 (283)
T cd05091         161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----  235 (283)
T ss_pred             CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence            9999999999887643322221233446789999999988889999999999999999998 8888765432211     


Q ss_pred             HHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                        ..........         .....++..+.+++..||+.+|.+||++++|++.|+.
T Consensus       236 --~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         236 --IEMIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             --HHHHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence              1111111111         0112346778999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=3.6e-35  Score=312.62  Aligned_cols=258  Identities=25%  Similarity=0.420  Sum_probs=204.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.++||+|+||.||++....  ...++..+++|.+..........+.+|++++++++|+||+++++++.++...++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            345667899999999999997532  223566899999876655556689999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCE
Q 045343          597 VYEFLNNGTLASFLFGN---------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA  661 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~  661 (813)
                      |+||+++++|.+++...               ..+++..++.++.||+.||+|||+   .+++|+||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            99999999999998653               247899999999999999999995   599999999999999999999


Q ss_pred             EEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHH
Q 045343          662 RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  740 (813)
                      ||+|||++................++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..       
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-------  234 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI-------  234 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH-------
Confidence            9999999976543322111222345678999999998899999999999999999998 88888643322111       


Q ss_pred             HhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .........         ......+..+.+++.+||+.||.+||++.||++.|++
T Consensus       235 ~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         235 ECITQGREL---------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHcCccC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            000000000         0111235678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.9e-35  Score=307.18  Aligned_cols=251  Identities=26%  Similarity=0.428  Sum_probs=199.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.++||+|+||.||++...    +...+|+|.++.. ....+++.+|+.++++++|+||+++++++.+.+..++||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~----~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR----AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec----cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence            34567789999999999999774    3457999987643 233467889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++... ..+++..+..++.|++.||.|||+   .+|+|+||||+||++++++.+||+|||+++.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence            999999999998753 468899999999999999999995   4999999999999999999999999999986543221


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   ...    ....  ....+  
T Consensus       156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~---~~i----~~~~--~~~~~--  223 (256)
T cd05114         156 TS-SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV---EMI----SRGF--RLYRP--  223 (256)
T ss_pred             ec-cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHH----HCCC--CCCCC--
Confidence            11 122335668999999998889999999999999999999 89998654322111   111    1100  00011  


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                           ......+.+++.+||+.+|.+||++.|+++.|.
T Consensus       224 -----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         224 -----KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             -----CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                 112457899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-35  Score=334.17  Aligned_cols=257  Identities=21%  Similarity=0.292  Sum_probs=211.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEe-ec------CC
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFC-DE------GQ  592 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~-~~------~~  592 (813)
                      ..+.+.|.+|||+.||.+.+..   .+..+|+|++-...+...+.+.+|+.+|++|+ |+|||.+++.. ..      .-
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~---~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVK---GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecC---CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            3456889999999999999863   33889999997766777888999999999997 99999999932 11      23


Q ss_pred             ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      +.+|.||||.+|+|-|++..+  ..|++.++++|+.|+++|+++||.. .++|||||||-|||||+.+++.||||||.|.
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            678999999999999999754  5699999999999999999999975 7889999999999999999999999999986


Q ss_pred             ccccCcccc-----eee--cccccccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH
Q 045343          671 LLTLNQSKA-----IRT--AIRGTKGYVAPEWF---RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       671 ~~~~~~~~~-----~~~--~~~gt~~y~aPE~l---~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  740 (813)
                      -........     +..  ...-|+.|+|||.+   .+..+++|+|||+|||+||-|+....||+...            
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------  262 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------  262 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------------
Confidence            433221100     000  11258899999987   57789999999999999999999999997432            


Q ss_pred             HhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                             ...|++.....+....+...|.+||+.||+.||.+||++-+|+..+-.+...+
T Consensus       263 -------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  263 -------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             -------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence                   12355556655555678999999999999999999999999999998776553

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.8e-35  Score=310.16  Aligned_cols=260  Identities=23%  Similarity=0.444  Sum_probs=206.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+...+.||+|+||.||+|.+..+......++||+++... ....+++..|++++++++|+||+++++++.+.+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            44566789999999999999986554455689999986532 22345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++++|.+++... ..+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence            9999999999999754 578999999999999999999995   499999999999999999999999999998765332


Q ss_pred             cccee-ecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          677 SKAIR-TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       677 ~~~~~-~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..... .....+..|+|||++....++.++||||||+++|||++ |+.||.....++..       ......        
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~-------~~i~~~--------  226 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM-------KAINDG--------  226 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH-------HHHhcC--------
Confidence            21111 11223457999999988889999999999999999998 99998654332111       111110        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                       ...+.....+..+.+++.+||+.+|++||++.+|++.|++++
T Consensus       227 -~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~  268 (268)
T cd05063         227 -FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL  268 (268)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             000111234567899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.5e-35  Score=311.70  Aligned_cols=259  Identities=25%  Similarity=0.368  Sum_probs=200.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCC-cceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRT-STTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+++.+.||+|+||+||+|....+.. ....+++|.+..... ....++..|+.++++++|+||+++++++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence            44566899999999999998753221 123578888754322 223567788888999999999999999864 457889


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+++|+||||+|||+++++.+||+|||+++......
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            9999999999999754 568999999999999999999995   489999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .........++..|+|||.+.+..++.++||||||+++|||++ |+.||..........+       .....  ....  
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-------~~~~~--~~~~--  232 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-------LEKGE--RLAQ--  232 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-------HHCCC--cCCC--
Confidence            2221233457788999999998889999999999999999998 9999875433221111       11111  0001  


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                           ...+...+.+++.+|+..+|.+|||+.|+++.|+.+.+
T Consensus       233 -----~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         233 -----PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             -----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence                 11134567889999999999999999999999988664

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.9e-36  Score=305.46  Aligned_cols=255  Identities=25%  Similarity=0.331  Sum_probs=193.4

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC-----ceEEEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----NRLLVY  598 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~lV~  598 (813)
                      .+.+|.|+||.||+|++..   .+..||||+.-..    .+--.+|+++|+++.|||||+|+-+|....     ...||+
T Consensus        29 ~~liG~GsFg~Vyq~~~~e---~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRE---TEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             eEEEeecccceEEEEEEcC---CCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            4789999999999999963   4678999997432    223457899999999999999999885432     245899


Q ss_pred             eecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccCccccc
Q 045343          599 EFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLT  673 (813)
Q Consensus       599 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGla~~~~  673 (813)
                      |||+. +|..++.+    +..++...+.-+..||.+||.|||.   .+|+||||||+|+|+|.+ +.+||+|||.|+.+.
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV  177 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence            99987 77777763    5667777788899999999999995   599999999999999965 999999999999987


Q ss_pred             cCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc-----
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK-----  747 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-----  747 (813)
                      .++..   ..+..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.++.+..+....-.+......+.     
T Consensus       178 ~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn  254 (364)
T KOG0658|consen  178 KGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN  254 (364)
T ss_pred             cCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence            65442   345578899999999875 699999999999999999999999987665443322111111111111     


Q ss_pred             -------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 -------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 -------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                             ..++...............+..+++.++|+.+|.+|.++.|++.+
T Consensus       255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence                   111111111111223456788999999999999999999999854

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.7e-35  Score=320.54  Aligned_cols=255  Identities=21%  Similarity=0.250  Sum_probs=201.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      +++.++||+|+||.||++....+...+..+|+|.+....    ....+.+..|+.++.++ +|+||+++++++..+...+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            467789999999999999876555578899999986432    12234577899999999 5999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~  158 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE  158 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence            999999999999999888889999999999999999999995   49999999999999999999999999999865433


Q ss_pred             cccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....||..|+|||++.+. .++.++|||||||++|||++|+.||..........  ........       .++
T Consensus       159 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~~~~~~~~-------~~~  228 (332)
T cd05614         159 EKER-TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--EVSRRILK-------CDP  228 (332)
T ss_pred             CCCc-cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH--HHHHHHhc-------CCC
Confidence            2221 2345699999999999865 47889999999999999999999997543211110  00001100       001


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ..    .......+.+++.+||+.||++||     ++++++++
T Consensus       229 ~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         229 PF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            11    112346778999999999999999     77788765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.3e-35  Score=322.92  Aligned_cols=272  Identities=24%  Similarity=0.345  Sum_probs=199.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-----c
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----N  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~  593 (813)
                      |++.++||+|+||.||+|...   .++..||||+++...  .....++.+|++++++++||||+++++++....     .
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   78 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDT---HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD   78 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEEC---CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence            567789999999999999874   357789999986432  223346889999999999999999999885432     4


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++||||+. ++|.+++.....+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF  154 (338)
T ss_pred             EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence            799999995 6899999887889999999999999999999995   499999999999999999999999999998654


Q ss_pred             cCccc-ceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHh
Q 045343          674 LNQSK-AIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDC  742 (813)
Q Consensus       674 ~~~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~  742 (813)
                      ..... .......||..|+|||++.+  ..++.++|||||||++|||++|+.||...............        ...
T Consensus       155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (338)
T cd07859         155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR  234 (338)
T ss_pred             cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            32221 11234568999999999876  57899999999999999999999999754332111100000        000


Q ss_pred             hccCccccccc---ccccc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcCC
Q 045343          743 YRNEKLDDLVE---GDMEA---LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVEV  799 (813)
Q Consensus       743 ~~~~~~~~~~~---~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~  799 (813)
                      ...........   .....   .........+.+++.+||+.||++|||++|++++  ++++...
T Consensus       235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~  299 (338)
T cd07859         235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKV  299 (338)
T ss_pred             hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence            00000000000   00000   0001124567899999999999999999999965  4544443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.6e-35  Score=306.38  Aligned_cols=253  Identities=31%  Similarity=0.461  Sum_probs=202.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||+|...........+|+|.++.... ...+++.+|+.+++++.|+||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999998765544557899999875433 23457889999999999999999999876 4568999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce-ee
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-RT  682 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~-~~  682 (813)
                      ++|.+++.....+++..+..++.|++.||+|||.   .+++|+||||+|||++.++.+||+|||+++.......... ..
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~  156 (257)
T cd05060          80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT  156 (257)
T ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence            9999999887788999999999999999999995   4899999999999999999999999999987654332210 11


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ...++..|+|||.+.+..++.++||||||+++|||++ |..||......+   +.....    ...  ..       ...
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~----~~~--~~-------~~~  220 (257)
T cd05060         157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLE----SGE--RL-------PRP  220 (257)
T ss_pred             CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHH----cCC--cC-------CCC
Confidence            1223567999999998889999999999999999998 999987543321   111111    110  00       111


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ...+..+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus       221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            233567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.3e-35  Score=314.77  Aligned_cols=274  Identities=25%  Similarity=0.375  Sum_probs=202.1

Q ss_pred             HhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec--CCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l  596 (813)
                      .+.+.+.||+|+||.||++.... ....+..|+||+++.......+.+.+|++++++++|+||+++++++..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            45667899999999999997632 234677899999876555556678999999999999999999998743  346889


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||+++++|.+++... ..+++..+..++.|++.||+|||+   .+|+|+||||+||++++++.+||+|||+++.....
T Consensus        85 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          85 VMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             EEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence            99999999999999754 468999999999999999999995   49999999999999999999999999999876543


Q ss_pred             cccce-eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~-~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..... .....++..|+|||.+.+..++.++||||||++++||++|..++..........+............+.+.+..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN  241 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence            22111 11122345699999998888999999999999999999987765322111000000000000000000001111


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..........+..+.+++.+||+.+|++|||+.||++.|+.+
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            111111223456799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.8e-35  Score=307.16  Aligned_cols=248  Identities=26%  Similarity=0.401  Sum_probs=195.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||+|...   .++..+|+|...... ......+.+|++++++++|+||+++++++......++|+||+++
T Consensus         1 ~~lg~g~~g~vy~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (252)
T cd05084           1 ERIGRGNFGEVFSGRLR---ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG   77 (252)
T ss_pred             CccCcccCccEEEEEEe---cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccC
Confidence            47999999999999874   356789999875432 23345689999999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          604 GTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       604 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      ++|.+++... ..+++..++.++.|+++||+|||+   .+++|+||||+||+++.++.+||+|||++.............
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  154 (252)
T cd05084          78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG  154 (252)
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence            9999999754 467899999999999999999995   599999999999999999999999999987654321111011


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....+..|+|||.+.+..++.++||||||+++|||++ |..|+..........       .....         ......
T Consensus       155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~-------~~~~~---------~~~~~~  218 (252)
T cd05084         155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE-------AIEQG---------VRLPCP  218 (252)
T ss_pred             CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH-------HHHcC---------CCCCCc
Confidence            1123457999999998889999999999999999998 888886433221110       00000         000111


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ...+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus       219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            123567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=4.7e-35  Score=308.08  Aligned_cols=254  Identities=26%  Similarity=0.426  Sum_probs=207.2

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.+.++||.|+||.||+|...    .+..+++|.++........++.+|+.+++.++|+||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWK----NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII   80 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEec----CCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence            345778899999999999999885    3678999998765544566789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++..++.++.||+.||.|||+   .+++|+||||+||++++++.+||+|||++......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKED  157 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence            9999999999999753  467899999999999999999995   48999999999999999999999999999876432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ...  .....++..|+|||.+.+..++.++||||||+++++|++ |+.||......+...   ...    ..        
T Consensus       158 ~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~---~~~----~~--------  220 (261)
T cd05148         158 VYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYD---QIT----AG--------  220 (261)
T ss_pred             ccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHH---HHH----hC--------
Confidence            211  123346778999999988889999999999999999998 899986543222111   110    00        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                       .........++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       221 -~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         221 -YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence             00111223457788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=5.4e-35  Score=309.26  Aligned_cols=259  Identities=25%  Similarity=0.433  Sum_probs=206.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+++.+.||+|+||.||+|....+......|+||.++... ....++|..|+.++++++|+||+++++++.++...++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            45678899999999999999987655556689999987532 23345799999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +||+++++|.+++... ..+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence            9999999999998753 567999999999999999999995   499999999999999999999999999988665432


Q ss_pred             ccceeec-cc--ccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          677 SKAIRTA-IR--GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       677 ~~~~~~~-~~--gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ....... ..  .+..|+|||.+.+..++.++||||||+++||+++ |..||......+   ....+..    .  .   
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i~~----~--~---  228 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAIEQ----D--Y---  228 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHHHc----C--C---
Confidence            2111111 11  2457999999998899999999999999999987 999986543221   1111110    0  0   


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                          ......+.+..+.+++.+||+.+|.+||++.+|+++|+++
T Consensus       229 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         229 ----RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             ----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                0011123456788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=4.3e-35  Score=315.95  Aligned_cols=268  Identities=25%  Similarity=0.389  Sum_probs=210.1

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEec----cCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEee
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILT----TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCD  589 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~----~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  589 (813)
                      +....+.+.+.||+|+||.||++....    ...+...||+|.++... ....+++.+|+.+++.+ +|+||+++++++.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            556667788999999999999997532    22345679999986432 23345788999999999 8999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      .....++||||+++++|.+++...                ..+++..+..++.||++||.|||+   .+++||||||+||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Ni  168 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNV  168 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceE
Confidence            999999999999999999998653                246788899999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~  732 (813)
                      ++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..|+.....++.
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  248 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  248 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence            999999999999999987654322221223345678999999988889999999999999999998 7788764332211


Q ss_pred             hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCC
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP  802 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p  802 (813)
                      .       .........         ......+..+.+++.+||+.+|.+||++.||++.|++++.+...
T Consensus       249 ~-------~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~~  302 (304)
T cd05101         249 F-------KLLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN  302 (304)
T ss_pred             H-------HHHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhhc
Confidence            1       111111000         01123457788999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.4e-35  Score=335.52  Aligned_cols=250  Identities=21%  Similarity=0.263  Sum_probs=200.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |.+.+.||+|+||.||+|....+  .+..|++|++..........+.+|+.+++.++|||||++++++..++..+|||||
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~--~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSD--PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCC--CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            77889999999999999976432  2567888876544333345678899999999999999999999999999999999


Q ss_pred             cCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          601 LNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       601 ~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +++|+|.+++..    ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+....
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            999999988754    3457888999999999999999995   599999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .........||++|+|||++.+..++.++|||||||++|||++|+.||......+.      ...... +....      
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~------~~~~~~-~~~~~------  290 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI------MQQVLY-GKYDP------  290 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHh-CCCCC------
Confidence            22223446699999999999999999999999999999999999999975432111      011110 11100      


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                         ........+.+++.+||+.+|++||++.++++
T Consensus       291 ---~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        291 ---FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ---CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence               01123467889999999999999999999874

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.4e-35  Score=312.68  Aligned_cols=267  Identities=25%  Similarity=0.374  Sum_probs=201.7

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccC-----------CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTR-----------TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~-----------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      ....+++.++||+|+||.||++......           .....||||+++... ......+.+|++++++++|+||+++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            3456778899999999999998764221           123468999986532 2233568899999999999999999


Q ss_pred             EeEeecCCceEEEEeecCCCchhhhhhccC------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNL------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       585 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      ++++...+..++||||+++++|.+++....            .+++..++.++.|++.||+|||+   .+++|+||||+|
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~N  159 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRN  159 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhh
Confidence            999999999999999999999999985431            36788999999999999999995   499999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh--CCcCCCcccch
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRKSFDIEMGE  730 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt--G~~p~~~~~~~  730 (813)
                      |++++++.+||+|||++................++..|+|||.+.+..++.++||||||++++||++  +..||.....+
T Consensus       160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~  239 (295)
T cd05097         160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE  239 (295)
T ss_pred             EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence            9999999999999999986543322111222345678999999988889999999999999999998  55676644322


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      ...   ................      ......+..+.+++.+|++.+|++||++++|++.|+.
T Consensus       240 ~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         240 QVI---ENTGEFFRNQGRQIYL------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHH---HHHHHhhhhccccccC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            211   1111111110000000      0111235689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4e-35  Score=313.90  Aligned_cols=259  Identities=27%  Similarity=0.424  Sum_probs=202.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||+|+||.||+|......  .....+++|.+..... ....++.+|+.+++.++|+||+++++.+...+..++|
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            356788999999999999874322  2335788988864322 2345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          598 YEFLNNGTLASFLFGN------------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      +||+.+++|.+++...                        ..+++..++.++.|++.||.|||+   .+++||||||+||
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~ni  158 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNV  158 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheE
Confidence            9999999999987532                        246788999999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~  732 (813)
                      |+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||++++||++ |+.||.....+..
T Consensus       159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  238 (290)
T cd05045         159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL  238 (290)
T ss_pred             EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999986543322111222345678999999988889999999999999999999 9999865432221


Q ss_pred             hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .       ......         ............+.+++.+||+.+|++||++.|+++.|+++..
T Consensus       239 ~-------~~~~~~---------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         239 F-------NLLKTG---------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             H-------HHHhCC---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            1       111111         0001112335678899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=5.3e-35  Score=292.78  Aligned_cols=272  Identities=22%  Similarity=0.248  Sum_probs=204.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--chhhhheeeeeeccccCCcceEEeEeec--CCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l  596 (813)
                      ++..+.|++|.||.||+|...   .++..||+|+++-..+..  .-.-.+||.+|.+.+|||||.+..+...  -+..+|
T Consensus        78 fe~lnrI~EGtyGiVYRakdk---~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   78 FEKLNRIEEGTYGVVYRAKDK---KTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHhhcccCcceeEEEeccC---CcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            344578999999999999874   467899999997532111  1235789999999999999999998744  457999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||||++ +|...+... .++...++.-+..|+++|++|||.   ..|+|||||++|+|+...|.+||+|||+|+.+...
T Consensus       155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence            9999988 778888765 478899999999999999999995   49999999999999999999999999999988765


Q ss_pred             cccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc---cCccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR---NEKLDDL  751 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~  751 (813)
                      ...  .+..+-|..|.|||.+.+. .|++.+|+||+|||+.||+++++.|.+...-++...   +...+.   +.....+
T Consensus       231 ~k~--~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~---If~llGtPte~iwpg~  305 (419)
T KOG0663|consen  231 LKP--YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK---IFKLLGTPSEAIWPGY  305 (419)
T ss_pred             ccc--CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH---HHHHhCCCccccCCCc
Confidence            332  4667889999999999876 589999999999999999999999987655333221   222211   1111110


Q ss_pred             cc--------------ccccccccH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCCC
Q 045343          752 VE--------------GDMEALNDI-KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNP  805 (813)
Q Consensus       752 ~~--------------~~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~p  805 (813)
                      .+              ..++..... ...+.-++|+...|..||.+|.|+.|.+++= -..+.|.|..|
T Consensus       306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~-~F~e~P~p~~P  373 (419)
T KOG0663|consen  306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE-YFRETPLPIDP  373 (419)
T ss_pred             cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc-ccccCCCCCCh
Confidence            00              001111111 1346678899999999999999999999763 23344444443

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=7.4e-35  Score=306.05  Aligned_cols=251  Identities=29%  Similarity=0.415  Sum_probs=199.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      ++||+|+||.||+|.+... .++..+|+|+++....  ...+++.+|+.++++++|+||+++++++. ++..++||||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~   78 (257)
T cd05116           1 GELGSGNFGTVKKGMYKMK-KSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE   78 (257)
T ss_pred             CcCCCcCCcceEEeEEecC-CCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence            3699999999999976432 3567899999864322  23457889999999999999999999885 457799999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce-e
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-R  681 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~-~  681 (813)
                      +++|.+++.....+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+++.......... .
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  155 (257)
T cd05116          79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK  155 (257)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence            99999999877788999999999999999999995   5999999999999999999999999999987654332110 1


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....++..|+|||.+....++.++||||||+++|||++ |+.||......+.   ..    ....+....         .
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~----~i~~~~~~~---------~  219 (257)
T cd05116         156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV---TQ----MIESGERME---------C  219 (257)
T ss_pred             CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HH----HHHCCCCCC---------C
Confidence            12234578999999988888999999999999999998 9999975433211   11    111111100         1


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....+..+.+++.+||+.||++||++.+|.+.|++.
T Consensus       220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            113456788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-36  Score=304.20  Aligned_cols=266  Identities=26%  Similarity=0.348  Sum_probs=206.0

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec-----CCceEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-----GQNRLL  596 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~~~l  596 (813)
                      .+.||+|++|.|.++...   .++..||||++.....  ...++..+|+++|++++|+||+.+.+.+..     -+..++
T Consensus        27 ~~~iG~GAyGvVcsA~~~---~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi  103 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDK---RTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL  103 (359)
T ss_pred             cccccCcceeeEEEEEEc---CCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence            578999999999999885   4568999999975433  335678899999999999999999998854     346899


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+|+| ..+|...++.+..++.....-++.||++||.|+|   +.+|+||||||+|+|++.+..+||+|||+|+......
T Consensus       104 V~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~  179 (359)
T KOG0660|consen  104 VFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF  179 (359)
T ss_pred             ehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeeccccC
Confidence            99999 6699999999888999999999999999999999   5699999999999999999999999999999986543


Q ss_pred             ccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc---
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV---  752 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---  752 (813)
                      .....+.++.|..|.|||++.. ..++..+||||.|||+.||++|++.|.+...-.+..+.-.......++.+..+.   
T Consensus       180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~  259 (359)
T KOG0660|consen  180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK  259 (359)
T ss_pred             cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence            3333577889999999998754 579999999999999999999999998765433322211111111111111111   


Q ss_pred             -----cc-----c--ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCc
Q 045343          753 -----EG-----D--MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVV  797 (813)
Q Consensus       753 -----~~-----~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~  797 (813)
                           ..     .  .... -.......++|+.+||..||.+|+|++|++++  |+..-
T Consensus       260 ar~yi~slp~~p~~~f~~~-fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h  317 (359)
T KOG0660|consen  260 ARPYIKSLPQIPKQPFSSI-FPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH  317 (359)
T ss_pred             HHHHHHhCCCCCCCCHHHH-cCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence                 10     0  0000 01334567899999999999999999999965  44443

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6.5e-35  Score=311.09  Aligned_cols=271  Identities=25%  Similarity=0.354  Sum_probs=203.3

Q ss_pred             hcccccceeeeeeEEEEEEec-cCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecC--CceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV  597 (813)
                      .+.+.||+|+||+||++.... ...++..||+|.++.... ...+.+.+|++++++++|+||+++++++...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            677899999999998876432 224667899999875422 2345788999999999999999999988654  357899


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++... .+++..++.++.|+++||.|||+   .+|+|+||||+||+++.++.+||+|||+++.......
T Consensus        87 ~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          87 MEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             ecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            9999999999998654 58999999999999999999995   4999999999999999999999999999987654322


Q ss_pred             cce-eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~-~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ... .....++..|+|||.+....++.++||||||++++||++|+.|+.......... ............+.+.++...
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM-IGPKQGQMTVVRLIELLERGM  241 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh-hcccccccchhhhhhhhhcCC
Confidence            110 112235667999999988889999999999999999999999986432211000 000000000011111111111


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ........+..+.+++..||+.+|++|||+++|+++|+.+.
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         242 RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            11122334678999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-35  Score=321.09  Aligned_cols=241  Identities=25%  Similarity=0.311  Sum_probs=199.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      ...|.++||+|.||+|+++...   .+++.+|||.+++..   .+..+..+.|.+|+... +||.|++|+..+...++++
T Consensus       369 ~F~~l~vLGkGsFGkV~lae~k---~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  369 DFRLLAVLGRGSFGKVLLAELK---GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             ceEEEEEeccCcCceEEEEEEc---CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            3456789999999999999985   456799999998742   33345577788777776 5999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      .||||+.||++ -++.+...+++..+.-++..|+.||+|||++   +|||||||.+|||||.+|++||+|||+.+.....
T Consensus       446 fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  446 FVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             EEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC
Confidence            99999999994 3344557889999999999999999999965   9999999999999999999999999999976533


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  ..+++||+.|||||++.+..|+..+|.|||||+|||||.|..||.++.+++...               .++...
T Consensus       522 g~~--TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd---------------sI~~d~  584 (694)
T KOG0694|consen  522 GDR--TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD---------------SIVNDE  584 (694)
T ss_pred             CCc--cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH---------------HHhcCC
Confidence            332  577999999999999999999999999999999999999999999776554321               111111


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                      .  .++.-.+.+...+++++|..+|++|.-+
T Consensus       585 ~--~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  585 V--RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             C--CCCCcccHHHHHHHHHHhccCcccccCC
Confidence            1  1233456788899999999999999876

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=7.6e-35  Score=312.59  Aligned_cols=265  Identities=25%  Similarity=0.406  Sum_probs=205.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCC-------------cceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRT-------------STTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~-------------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      ..+++.++||+|+||.||++.......             ....||+|++..... ...+++.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            456778999999999999998754321             235689999875322 234578899999999999999999


Q ss_pred             EeEeecCCceEEEEeecCCCchhhhhhccC-----------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNL-----------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       585 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      ++++..+...++|+||+++++|.+++....           .+++..++.++.|++.||+|||+   .+++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Ni  161 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhce
Confidence            999999999999999999999999997654           68899999999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh--CCcCCCcccchh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRKSFDIEMGEE  731 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt--G~~p~~~~~~~~  731 (813)
                      +++.++.++|+|||+++...............++..|+|||.+.+..++.++||||||+++|||++  +..|+.......
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ  241 (296)
T ss_pred             eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence            999999999999999986544332222333456788999999988889999999999999999998  666765332211


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                         ...................      .....+.++.+++.+||+.||.+|||+.||++.|+.
T Consensus       242 ---~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         242 ---VIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             ---HHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence               1111111111111111000      111234689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=6.3e-35  Score=314.23  Aligned_cols=261  Identities=25%  Similarity=0.392  Sum_probs=204.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCCc
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  593 (813)
                      ...+.+.+.||+|+||.||++....  .......+|||.++.... ...+.+.+|+++++++ +|+||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            3456778899999999999997632  223456799998865322 2235688999999999 79999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .++|+||+++|+|.+++....  .+++..+..++.|++.||+|||+   .+|+|+||||+|||++.++.++|+|||+++.
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccccc
Confidence            999999999999999997543  37999999999999999999995   4999999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ..............++..|+|||.+.+..++.++||||||+++|||++ |..||......+.  +...    ....    
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~----~~~~----  260 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKL----IKEG----  260 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHH----HHcC----
Confidence            654322111222346778999999998889999999999999999998 9999865432211  1111    1110    


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                           ..........+.+.+++.+||+.+|++||++.||++.|+++
T Consensus       261 -----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         261 -----YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                 00001112246789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5e-36  Score=291.57  Aligned_cols=250  Identities=26%  Similarity=0.375  Sum_probs=201.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--------chhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--------EKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--------~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      |+-.+.||+|..++|-++...   ..+...|+|++.......        .++-..|+.+|+++ .||+|+++.++++.+
T Consensus        19 y~pkeilgrgvss~vrRci~k---~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHK---ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             cChHHHhcccchhhhhhhhhc---ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            444578999999999998874   466788888886432111        12346789999998 599999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .-.++|+|.|+.|.|.|+|.....++++..++|+.|+.+|+.|||.   .+||||||||+|||+|++.++||+|||+|..
T Consensus        96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeec
Confidence            9999999999999999999999999999999999999999999994   5999999999999999999999999999998


Q ss_pred             cccCcccceeecccccccccCcccccC------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      +.++..   ....+||++|+|||.+..      ..|+..+|+|++||+||.|+.|.+||....   +..+.    +...+
T Consensus       173 l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---QmlML----R~Ime  242 (411)
T KOG0599|consen  173 LEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---QMLML----RMIME  242 (411)
T ss_pred             cCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH---HHHHH----HHHHh
Confidence            876654   456789999999998853      357889999999999999999999996321   11111    11111


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ++..      ...+.-.+.+....+|+.+||+.||.+|.|++|++++
T Consensus       243 Gkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  243 GKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             cccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            1111      0111123456788999999999999999999999864

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.6e-35  Score=324.81  Aligned_cols=259  Identities=21%  Similarity=0.251  Sum_probs=197.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..|.+.++||+|+||.||++...   ..++.||||+...      ..+.+|++++++++||||+++++++..+...++|+
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~---~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDN---KTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEEC---CCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence            34777899999999999999874   3567899997532      35678999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |++. ++|.+++.....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus       163 e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        163 PRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            9985 6888888877788999999999999999999995   49999999999999999999999999999754322111


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch-----hhhhhHHHHHHhhcc--C-----
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE-----EYAILTDWAFDCYRN--E-----  746 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~-----~~~~l~~~~~~~~~~--~-----  746 (813)
                      . .....||+.|+|||++.+..++.++|||||||++|||++|+.|+......     ....+ ..+......  .     
T Consensus       239 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l-~~i~~~~g~~p~~~~~~  316 (391)
T PHA03212        239 K-YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI-KLIIRRSGTHPNEFPID  316 (391)
T ss_pred             c-cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH-HHHHHHhcCChhhcCcc
Confidence            1 23457999999999999989999999999999999999999887532210     00111 001100000  0     


Q ss_pred             ---cccccc---------ccccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 ---KLDDLV---------EGDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ---~~~~~~---------~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         .+....         .+...  .......+..+.+++.+||+.||.+|||++|++++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence               000000         00000  00011345678899999999999999999999964

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.3e-34  Score=318.96  Aligned_cols=247  Identities=24%  Similarity=0.371  Sum_probs=192.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.++||+|+||.||+|...   .+++.||||.+..... ...+.+.+|++++++++|+||+++++++.++...++|||
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHR---PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEEC---CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            345688999999999999874   3567899999864322 224568899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+.    ....+..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++.+...... 
T Consensus       153 ~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~-  224 (353)
T PLN00034        153 FMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP-  224 (353)
T ss_pred             cCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc-
Confidence            9999998654    234677788999999999999995   49999999999999999999999999999876533211 


Q ss_pred             eeecccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~-----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                       .....||..|+|||.+...     ..+.++|||||||++|||++|+.||......+...+....   ... .       
T Consensus       225 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~---~~~-~-------  292 (353)
T PLN00034        225 -CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---CMS-Q-------  292 (353)
T ss_pred             -ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH---hcc-C-------
Confidence             2345689999999988532     2356899999999999999999999743322211111100   000 0       


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ...........+.+++.+||+.||++||++.||+++
T Consensus       293 --~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        293 --PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             --CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000112345678999999999999999999999987

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-35  Score=321.77  Aligned_cols=242  Identities=25%  Similarity=0.276  Sum_probs=196.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      +.||+|+||.||++....++..+..+|||+++....  .....+..|++++++++|+||+++++++.++...++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            579999999999998765556788999999975322  223456789999999999999999999999999999999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      +|+|.+++.....+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++........  ..
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~  156 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AY  156 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc--ee
Confidence            99999999888889999999999999999999995   59999999999999999999999999999865433221  23


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccH
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI  762 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  762 (813)
                      ...|+..|+|||.+.+..++.++||||||+++|||++|+.||.........   .   ... ....        .  ...
T Consensus       157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~---~---~i~-~~~~--------~--~p~  219 (318)
T cd05582         157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM---T---MIL-KAKL--------G--MPQ  219 (318)
T ss_pred             cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH---H---HHH-cCCC--------C--CCC
Confidence            456899999999999888999999999999999999999999754322111   0   110 1000        0  011


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHH
Q 045343          763 KCVEKLVMVSIWCIQEDPSLRPTMKK  788 (813)
Q Consensus       763 ~~~~~l~~l~~~Cl~~dP~~RPt~~e  788 (813)
                      .....+.+++.+||+.||.+||++.+
T Consensus       220 ~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         220 FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            23467889999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-35  Score=323.39  Aligned_cols=255  Identities=29%  Similarity=0.440  Sum_probs=214.2

Q ss_pred             ccccceeeeeeEEEEEEeccC-CcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      .++||+|+||+||||.+.-.. .-..+||||++... ..+...++.+|+.+|.++.|+||++|+|+|.... ..||++||
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            478999999999999886442 22357999998654 3344678999999999999999999999998776 88999999


Q ss_pred             CCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          602 NNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       602 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +.|.|.||++. +..+..+..+.|..|||+||.|||++   +++||||..+|||+..-.++||.|||+++.+..+.....
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~  856 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS  856 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence            99999999975 46788889999999999999999965   999999999999999999999999999999987766543


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                      .....-.+-|||-|.+....++.++|||||||.+||++| |..|++....++.                .++++...+..
T Consensus       857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI----------------~dlle~geRLs  920 (1177)
T KOG1025|consen  857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI----------------PDLLEKGERLS  920 (1177)
T ss_pred             ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh----------------hHHHhccccCC
Confidence            444455678999999999999999999999999999999 9999876554433                23333333444


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ++..+...+..++.+||..|+..||+++++...+.++..
T Consensus       921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            566788999999999999999999999999988766543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.1e-35  Score=318.18  Aligned_cols=250  Identities=24%  Similarity=0.316  Sum_probs=196.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||++...   ..++.||||.++...   ....+.+..|..++.++ +||||+++++++.+.+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~   77 (329)
T cd05588           1 RVIGRGSYAKVLLVELK---KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF   77 (329)
T ss_pred             CeEeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence            46899999999999874   356789999997532   12234577899999888 799999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~--  152 (329)
T cd05588          78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT--  152 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCc--
Confidence            9999999999888889999999999999999999995   59999999999999999999999999998753222111  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh--hhhhHHHHHHhhccCcccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .....||..|+|||++.+..++.++|||||||++|||++|+.||+.....+  ......+.........        ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  224 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------IRI  224 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------CCC
Confidence            234578999999999999999999999999999999999999997432111  1111111111111111        111


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPT------MKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  792 (813)
                        +......+.+++.+||+.||.+||+      +.+++++
T Consensus       225 --p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         225 --PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             --CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence              1123467889999999999999997      6777654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2.4e-35  Score=320.87  Aligned_cols=244  Identities=23%  Similarity=0.266  Sum_probs=197.3

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.||+|+||.||++...   ..+..+|+|.++...   .....++..|++++..++|+||+++.+++...+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~   77 (325)
T cd05594           1 KLLGKGTFGKVILVKEK---ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA   77 (325)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            46899999999999864   367889999987532   122345678999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|+|.+++.....+++..+..++.||+.||+|||+  ..+|+||||||+|||++.++.+||+|||+++........  .
T Consensus        78 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~  153 (325)
T cd05594          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M  153 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc--c
Confidence            999999999888889999999999999999999994  158999999999999999999999999998754322211  2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....||..|+|||++.+..++.++|||||||++|||++|+.||.....+....       .......      ..    .
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~-------~i~~~~~------~~----p  216 (325)
T cd05594         154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE-------LILMEEI------RF----P  216 (325)
T ss_pred             ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH-------HHhcCCC------CC----C
Confidence            33569999999999999899999999999999999999999997543322111       0000000      00    1


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ......+.+++.+||+.||.+|+     ++.+++++
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            12346788999999999999996     89999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=6.4e-35  Score=306.39  Aligned_cols=251  Identities=26%  Similarity=0.407  Sum_probs=199.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.+.||+|+||.||+|...    ....+|||.++.. .....++.+|+.++++++||||+++++++.+.+..++||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~----~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec----CCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence            34567889999999999999764    3346999988643 233467899999999999999999999999988999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+.+++|.+++... ..+++..+++++.||+.||+|||+   .+++|+||||+||++++++.+||+|||+++.......
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY  155 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence            999999999999764 468999999999999999999995   4999999999999999999999999999886543321


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||........   ....    ......       
T Consensus       156 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~~----~~~~~~-------  220 (256)
T cd05113         156 TS-SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET---VEKV----SQGLRL-------  220 (256)
T ss_pred             ee-cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHH----hcCCCC-------
Confidence            11 112335678999999988889999999999999999999 9999864432211   1111    111000       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                        .......+.+.+++.+||+.+|.+||++.+|++.|+
T Consensus       221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence              001123578899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.1e-34  Score=307.23  Aligned_cols=254  Identities=26%  Similarity=0.414  Sum_probs=196.3

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecC------Cce
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------QNR  594 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~  594 (813)
                      +.+.||+|+||.||+|...... ....+|||.++..  .....+.+.+|++++++++|+||+++++++...      ...
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDD-SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccccCcccCceEEEeEEccCC-CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            5688999999999999875332 2346899987643  223345688899999999999999999987432      246


Q ss_pred             EEEEeecCCCchhhhhhc------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          595 LLVYEFLNNGTLASFLFG------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      ++|+||+++|+|.+++..      ...+++.....++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence            899999999999988742      2347899999999999999999995   4999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   +    ......+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~----~~~~~~~~  231 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---I----YDYLRQGN  231 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHcCC
Confidence            987654322111122345678999999998889999999999999999999 788886433211   1    11111111


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ...         ........+.+++.+||+.+|++|||+.||++.|+.+
T Consensus       232 ~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 RLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            100         1112356788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=7.4e-35  Score=324.06  Aligned_cols=253  Identities=21%  Similarity=0.282  Sum_probs=197.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.++||+|+||+||+|...   ..++.+|||++....   ......+.+|+.++++++|+||+++++++.+.+..++|
T Consensus         3 f~~~~~LG~G~~g~Vy~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLACKV---DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             ceEEEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence            456789999999999999874   366789999986532   22345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.||+.||.|||.   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~  156 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN  156 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence            9999999999999888888999999999999999999995   5999999999999999999999999999764321100


Q ss_pred             c---------------------------------------------ceeecccccccccCcccccCCCCCCccchhhHHH
Q 045343          678 K---------------------------------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGV  712 (813)
Q Consensus       678 ~---------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gv  712 (813)
                      .                                             .......||..|+|||.+.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~  236 (381)
T cd05626         157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV  236 (381)
T ss_pred             cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence            0                                             0012346999999999999888999999999999


Q ss_pred             HHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHH--hcccCCCCCCCHHHHH
Q 045343          713 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIW--CIQEDPSLRPTMKKVL  790 (813)
Q Consensus       713 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPt~~evl  790 (813)
                      ++|||++|+.||......+...      .......       .............+.+++.+  |+..++..||++.|++
T Consensus       237 il~elltG~~Pf~~~~~~~~~~------~i~~~~~-------~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l  303 (381)
T cd05626         237 ILFEMLVGQPPFLAPTPTETQL------KVINWEN-------TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK  303 (381)
T ss_pred             HHHHHHhCCCCCcCCCHHHHHH------HHHcccc-------ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence            9999999999997654322110      0000000       00001111224566677766  5667777899999999


Q ss_pred             HH
Q 045343          791 QM  792 (813)
Q Consensus       791 ~~  792 (813)
                      ++
T Consensus       304 ~h  305 (381)
T cd05626         304 AH  305 (381)
T ss_pred             cC
Confidence            76

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.3e-35  Score=309.08  Aligned_cols=261  Identities=28%  Similarity=0.442  Sum_probs=205.8

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +....+.+.++||+|+||.||+|......  .....|++|.+.... .....++.+|+.++..++|+||+++++++....
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   82 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ   82 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence            34456677899999999999999876432  345789999986432 223446889999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEE
Q 045343          593 NRLLVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR  662 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~k  662 (813)
                      ..++||||+++++|.+++...          ..+++..++.++.||+.||.|||+   .+++|+||||+||+++.++.+|
T Consensus        83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~k  159 (277)
T cd05032          83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVK  159 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEE
Confidence            999999999999999998642          236788999999999999999995   5999999999999999999999


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||.....++..   .    
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~---~----  232 (277)
T cd05032         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVL---K----  232 (277)
T ss_pred             ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHH---H----
Confidence            999999987654332211233446789999999988889999999999999999998 88888644332211   1    


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .........         .....+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       233 ~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         233 FVIDGGHLD---------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             HHhcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            111111111         111235788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=7.2e-35  Score=317.52  Aligned_cols=250  Identities=24%  Similarity=0.324  Sum_probs=195.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||++...   ..++.+|+|.++...   ....+.+..|+.++.++ +|+||+++++++...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   77 (329)
T cd05618           1 RVIGRGSYAKVLLVRLK---KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY   77 (329)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence            46999999999999874   356789999987532   12234577888888776 799999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|..++.....+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~--  152 (329)
T cd05618          78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--  152 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc--
Confidence            9999999999888889999999999999999999995   49999999999999999999999999998754322111  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh--hhhhHHHHHHhhccCcccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .....||..|+|||++.+..++.++||||||+++|||++|+.||.......  ......+..........        . 
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~-  223 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R-  223 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--------C-
Confidence            234568999999999999999999999999999999999999996322111  01111111111111111        1 


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPT------MKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~evl~~  792 (813)
                       .+......+.+++.+||+.||.+||+      +.+++++
T Consensus       224 -~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         224 -IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             -CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence             11123467789999999999999998      5676654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.2e-34  Score=306.08  Aligned_cols=255  Identities=23%  Similarity=0.309  Sum_probs=202.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+++.++||+|+||.||+|...   .++..+|+|+++.........+.+|+.++.+++|+||+++++.+..++..++|+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~---~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNL---HTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEEC---CCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            45677899999999999999874   356789999987544444556888999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..+..++.|+++||.|||+   .+|+|+||||+||+++.++.+||+|||+++........
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence            999999999999877788999999999999999999995   49999999999999999999999999999876432211


Q ss_pred             ceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                        .....++..|+|||.+.   ...++.++||||||++++||++|+.|+..........       .....   ....+.
T Consensus       163 --~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~~~---~~~~~~  230 (267)
T cd06646         163 --RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMSKS---NFQPPK  230 (267)
T ss_pred             --cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eeecC---CCCCCC
Confidence              22345888999999884   3457889999999999999999999985332211100       00000   000011


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ...  .......+.+++.+||+.+|++||++++|+++|
T Consensus       231 ~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         231 LKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             Ccc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            110  112357889999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.3e-34  Score=320.10  Aligned_cols=253  Identities=22%  Similarity=0.272  Sum_probs=194.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||+|+||+||++...   ..++.+|||+++...   ......+.+|+.++.+++|+||+++++.+.+....++|
T Consensus         3 y~~~~~LG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv   79 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQKK---DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI   79 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEEEC---CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence            456789999999999999864   356789999987532   12234678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence            9999999999999888889999999999999999999995   5999999999999999999999999999876532110


Q ss_pred             c---------------------------------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCC
Q 045343          678 K---------------------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       678 ~---------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      .                                 .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf  236 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence            0                                 0012346999999999999999999999999999999999999999


Q ss_pred             CcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHH
Q 045343          725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCI--QEDPSLRPTMKKVLQM  792 (813)
Q Consensus       725 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl--~~dP~~RPt~~evl~~  792 (813)
                      ......+..   .   ..... . ..+..+     ......+.+.+++.+++  ..++..||+++||+++
T Consensus       237 ~~~~~~~~~---~---~i~~~-~-~~~~~p-----~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         237 CSETPQETY---K---KVMNW-K-ETLIFP-----PEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             CCCCHHHHH---H---HHHcC-c-CcccCC-----CcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            754432211   0   00000 0 001001     01112345556666533  3344567999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=6.8e-35  Score=316.79  Aligned_cols=243  Identities=23%  Similarity=0.332  Sum_probs=195.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   ..+..+|||.++...   ....+.+..|.+++..+ +|+||+++++++.+.+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~   77 (321)
T cd05591           1 KVLGKGSFGKVMLAELK---GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY   77 (321)
T ss_pred             CccccCCCeEEEEEEEC---CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence            46999999999999874   356789999987532   22234567788888765 799999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|..++.....+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--  152 (321)
T cd05591          78 VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--  152 (321)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc--
Confidence            9999999999888889999999999999999999995   49999999999999999999999999998764322211  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||..|+|||++.+..++.++||||||+++|||++|+.||......+..   .   ..... .   ...       
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~---~---~i~~~-~---~~~-------  215 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLF---E---SILHD-D---VLY-------  215 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHH---H---HHHcC-C---CCC-------
Confidence            23456899999999999989999999999999999999999999765432211   0   11111 0   000       


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRP-------TMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RP-------t~~evl~~  792 (813)
                      .......+.+++..||+.||.+||       ++.+++++
T Consensus       216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            111246788999999999999999       88888765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.2e-34  Score=308.27  Aligned_cols=263  Identities=25%  Similarity=0.398  Sum_probs=203.4

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCC-cceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRT-STTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ....++.++||+|+||+||+|....+.. ....||+|.++... ....+++.+|+.++..++|+||+++++++.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            3456677899999999999998653322 12358999986432 2234578889999999999999999999975 4578


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +++||+++|+|.+++... ..+++..++.++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+++....
T Consensus        85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            999999999999999764 568999999999999999999995   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |..||.......   +....    ......    
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~~~----  230 (279)
T cd05109         162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLL----EKGERL----  230 (279)
T ss_pred             ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH----HCCCcC----
Confidence            322211122335678999999998889999999999999999998 888886433221   11111    111000    


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                           .........+.+++..||+.||++||++.|+++.|+.+...+
T Consensus       231 -----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         231 -----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence                 011123567889999999999999999999999998775443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=9e-35  Score=315.58  Aligned_cols=243  Identities=25%  Similarity=0.362  Sum_probs=194.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   .+++.||||.++...   ....+.+..|..++..+ +|+||+++++++.+.+..++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey   77 (320)
T cd05590           1 RVLGKGSFGKVMLARLK---ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF   77 (320)
T ss_pred             CeeeeCCCeEEEEEEEc---CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence            46999999999999874   356789999987532   22334567788888766 699999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~--  152 (320)
T cd05590          78 VNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--  152 (320)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc--
Confidence            9999999999888889999999999999999999995   59999999999999999999999999998764322211  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..       ........   ..       
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~-------~~i~~~~~---~~-------  215 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLF-------EAILNDEV---VY-------  215 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH-------HHHhcCCC---CC-------
Confidence            23456899999999999889999999999999999999999999754432211       11111100   00       


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTM------KKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  792 (813)
                      .......+.+++.+||+.||.+||++      ++++++
T Consensus       216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            11234678899999999999999998      666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=8.6e-35  Score=314.04  Aligned_cols=264  Identities=27%  Similarity=0.395  Sum_probs=205.4

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccC----CcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEee
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCD  589 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~  589 (813)
                      +....+.+.++||+|+||.||++......    .....+|+|.++... .....++.+|++++.++ +|+||+++++++.
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            44566888899999999999999764321    233579999987532 23345688899999999 7999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      .....++|+||+++|+|.+++...                ..+++..+++++.|++.||+|||+   .+++|+||||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Ni  171 (307)
T cd05098          95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV  171 (307)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHhe
Confidence            999999999999999999999653                247899999999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~  732 (813)
                      +++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....++.
T Consensus       172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~  251 (307)
T cd05098         172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  251 (307)
T ss_pred             EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence            999999999999999986643221111122234568999999998889999999999999999998 8888864432211


Q ss_pred             hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .       ........         ..........+.+++.+||+.+|.+||++.+|++.|+.++.
T Consensus       252 ~-------~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         252 F-------KLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             H-------HHHHcCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            1       11111110         00111235678899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-34  Score=303.56  Aligned_cols=249  Identities=27%  Similarity=0.420  Sum_probs=198.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.+.||+|+||.||+|...    ....+|+|.+... .....++.+|++++++++|+||+++++++.+....++|+|
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR----GKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec----CCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            4567889999999999999763    3457899987643 2234568889999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..++.++.|+++||+|||+   .+++|+||||+||++++++.+||+|||+++........
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence            99999999999753 467999999999999999999995   48999999999999999999999999999865432211


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      . .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   ..    ....     ..    
T Consensus       157 ~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~----~~~~-----~~----  219 (256)
T cd05059         157 S-SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV---ES----VSAG-----YR----  219 (256)
T ss_pred             c-cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH---HH----HHcC-----Cc----
Confidence            1 111224457999999998899999999999999999999 88888654322111   10    0000     00    


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .......+..+.+++.+||+.+|++|||+.|+++.|
T Consensus       220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            011122467899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.6e-34  Score=309.11  Aligned_cols=263  Identities=24%  Similarity=0.338  Sum_probs=192.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeecc---ccCCcceEEeEee-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQT---HHKNLVRLLGFCD-----  589 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~g~~~-----  589 (813)
                      .|++.++||+|+||.||+|....  ..+..||||+++.....  ....+.+|+.+++++   +||||++++++|.     
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLK--NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcC--CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            36677899999999999998642  24578999988643221  223455666666555   6999999999885     


Q ss_pred             cCCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .....++|+||+. ++|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus        80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence            3446899999996 5888888653  457899999999999999999995   499999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHHHHHhhccC
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDWAFDCYRNE  746 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~  746 (813)
                      +++......   ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......+.. .+.... .....+
T Consensus       156 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~-~~~~~~  231 (290)
T cd07862         156 LARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI-GLPGEE  231 (290)
T ss_pred             ceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh-CCCChh
Confidence            998754331   123456899999999998888999999999999999999999999865432211 111000 000000


Q ss_pred             ccc-------ccccccccc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLD-------DLVEGDMEA---LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~-------~~~~~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...       .........   .......+.+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            000       000000000   0001234667899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.8e-34  Score=303.70  Aligned_cols=255  Identities=31%  Similarity=0.458  Sum_probs=203.6

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ++...++++.++||+|+||.||+|...    ++..+|+|.+.... ....++.+|+.++++++|+||+++++++. .+..
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~----~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~   75 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYN----GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI   75 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecC----CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence            355678889999999999999999864    45779999987532 33467899999999999999999999874 4678


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++|+||+++++|.+++...  ..+++..+..++.|++.||+|||+   .+++|+||||+||++++++.++|+|||++...
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  152 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLI  152 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeec
Confidence            9999999999999998653  467899999999999999999994   59999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ....... .....++..|+|||.+....++.++||||||++++||++ |+.||......+..   ..    .....    
T Consensus       153 ~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~----~~~~~----  220 (260)
T cd05067         153 EDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI---QN----LERGY----  220 (260)
T ss_pred             CCCCccc-ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH---HH----HHcCC----
Confidence            5322211 223345678999999988889999999999999999999 99999754322111   10    00000    


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                           ........+..+.+++.+|++.+|++||+++++++.|+.
T Consensus       221 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         221 -----RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             -----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence                 000111234679999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.2e-34  Score=308.11  Aligned_cols=257  Identities=28%  Similarity=0.407  Sum_probs=199.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+.+.+.||+|++|.||+|......  .....|++|...... ......+..|+.++++++|+||+++++++.+....+
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            34566789999999999999885311  145678999876432 223456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccC-------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC---CEEEee
Q 045343          596 LVYEFLNNGTLASFLFGNL-------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY---NARISD  665 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~-------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~---~~kl~D  665 (813)
                      +||||+++++|.+++....       .+++..+++++.||++||+|||+   .+++|+||||+||+++.++   .+||+|
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~d  162 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIAD  162 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEecc
Confidence            9999999999999986542       57899999999999999999995   4899999999999998654   599999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||.....++..   ....   .
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~---~~~~---~  236 (277)
T cd05036         163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM---EFVT---G  236 (277)
T ss_pred             CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHHH---c
Confidence            999987643221111112233568999999998899999999999999999997 99998754332211   1100   0


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ...          .......+..+.+++.+|++.+|++||++.+|+++|+
T Consensus       237 ~~~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         237 GGR----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            000          0111233567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.9e-34  Score=304.80  Aligned_cols=259  Identities=23%  Similarity=0.412  Sum_probs=205.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||+|...........+|+|.++... ....+.+.+|+.++.+++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45667899999999999999876544456689999986532 22345789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++++|.+++... ..+++..+..++.|++.||+|||+   .+++|+||||+|||++.++.++|+|||+++......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            9999999999999764 467999999999999999999995   599999999999999999999999999998765432


Q ss_pred             ccce-eecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          677 SKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       677 ~~~~-~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....++..|+|||.+.+..++.++||||||+++||+++ |..||......+.   .....    ..        
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~---~~~~~----~~--------  225 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV---IKAIE----EG--------  225 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH---HHHHh----CC--------
Confidence            2111 111223568999999998889999999999999999887 9999865432211   11111    00        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                       .........+..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus       226 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         226 -YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence             00011123356788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-35  Score=323.73  Aligned_cols=252  Identities=21%  Similarity=0.272  Sum_probs=203.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |.+.+.||+|+||+||+|...   .+++.||||+++...   ......+.+|+.++..++|+||+++++++.+++..++|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDK---DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEEC---CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence            567789999999999999874   357889999987532   13345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc-
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ-  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~-  676 (813)
                      |||+++++|.+++.....+++..++.++.||+.||+|||.   .+|+||||||+|||++.++.+||+|||++....... 
T Consensus        80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  156 (350)
T cd05573          80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD  156 (350)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence            9999999999999888889999999999999999999995   599999999999999999999999999998765432 


Q ss_pred             --------------------------ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          677 --------------------------SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       677 --------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                                                .........||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~  236 (350)
T cd05573         157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ  236 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence                                      001123356899999999999999999999999999999999999999765432


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT-MKKVLQM  792 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~  792 (813)
                      ...      .......       .....+......+.+.+++..|++ +|.+||+ +++++++
T Consensus       237 ~~~------~~i~~~~-------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         237 ETY------NKIINWK-------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHH------HHHhccC-------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            111      0000000       000001111135778899999997 9999999 9999986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.6e-34  Score=303.53  Aligned_cols=256  Identities=23%  Similarity=0.350  Sum_probs=203.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.++||+|+||.||+|...   .++..||||.++...   ......+.+|++++++++|+||+++++++.+.+..++
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCL---LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEe---CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence            3567789999999999999874   356789999875421   2223468889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      |+||+++++|.+++..    ...+++..+..++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence            9999999999988853    3457888999999999999999995   49999999999999999999999999998876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....++..|+|||.+.+...+.++|+||||+++|||++|+.|+........ .+.    .......     
T Consensus       157 ~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~----~~~~~~~-----  224 (267)
T cd08228         157 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLC----QKIEQCD-----  224 (267)
T ss_pred             cchhHH--HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHH----HHHhcCC-----
Confidence            543221  2234578899999999888899999999999999999999999864332111 111    1111100     


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      .+.   .........+.+++.+||+.+|++||++.||++.|+++
T Consensus       225 ~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         225 YPP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            000   11123457789999999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.9e-34  Score=310.67  Aligned_cols=262  Identities=22%  Similarity=0.288  Sum_probs=194.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|++.++||+|+||.||+|...   .++..+|||+++.... .....+.+|+.++++++|+||+++++++.+++..++||
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSK---VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEEC---CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence            4667889999999999999874   3567899999865432 22345778999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+. ++|.+++.. ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  158 (303)
T cd07869          83 EYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH  158 (303)
T ss_pred             ECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence            9996 567776654 4568899999999999999999995   4999999999999999999999999999875432211


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cc------
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EK------  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~------  747 (813)
                      .  .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||........ .+ .........   ..      
T Consensus       159 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         159 T--YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD-QL-ERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             c--CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-HH-HHHHHHhCCCChhhccchhh
Confidence            1  233457899999998865 4578899999999999999999999975432111 11 111110000   00      


Q ss_pred             cccccccccc--ccc-------cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDME--ALN-------DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~--~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..........  ...       .......+.+++.+||+.||.+|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence            0000000000  000       01123567899999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.7e-34  Score=308.66  Aligned_cols=262  Identities=27%  Similarity=0.444  Sum_probs=202.7

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ....+.+.++||+|+||.||+|....  .......||+|.++.... ....++.+|+.++++++|+||+++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            34567788999999999999997642  223456899998764321 223457889999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhcc----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          594 RLLVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      .++||||+++|+|.+++...          ..+++..+.+++.|++.||.|||+   .+|+||||||+||++++++.++|
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence            99999999999999999642          234677888999999999999995   49999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....++..   ..    
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~---~~----  233 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL---KF----  233 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HH----
Confidence            99999986543322111122335678999999998889999999999999999998 78888643322211   11    


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ........         ........+.+++.+||+.+|.+|||+.++++.|+..+
T Consensus       234 ~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         234 VMDGGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHcCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            11110000         01123578999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=290.35  Aligned_cols=254  Identities=24%  Similarity=0.327  Sum_probs=203.9

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeec--cccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ....|++.++||+|.|+.||++...   ..++..|+|.+..  .+..+.+++.+|+.|-+.|+|||||+|.....+..-.
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~---~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~   85 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH   85 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhc---cchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccccee
Confidence            3456778899999999999998763   4666777776632  2334667889999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKL  671 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~  671 (813)
                      +||+|+|.|++|..-+-.+...++......++||+++|.|+|.   .+|||||+||+|++|-   ...-+||+|||+|..
T Consensus        86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            9999999999998777666677888889999999999999995   5999999999999994   455699999999998


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      +...   .......||++|||||++...+++..+|||+.||+||-||.|..||..+....   +    ++.+..+..+  
T Consensus       163 l~~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r---l----ye~I~~g~yd--  230 (355)
T KOG0033|consen  163 VNDG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---L----YEQIKAGAYD--  230 (355)
T ss_pred             eCCc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH---H----HHHHhccccC--
Confidence            8722   22456789999999999999999999999999999999999999998644321   1    1111111111  


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          +....-....++..+|+++||..||.+|.|+.|.+++
T Consensus       231 ----~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  231 ----YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             ----CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence                1111112346778899999999999999999998865

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.2e-34  Score=311.29  Aligned_cols=259  Identities=26%  Similarity=0.411  Sum_probs=201.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|+||.||+|....+. ....+++|.++... ....+.+.+|++++.++ +||||+++++++.+....++|+
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~   82 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI   82 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence            567789999999999999875432 23457888876422 22345688999999999 7999999999999999999999


Q ss_pred             eecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEE
Q 045343          599 EFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR  662 (813)
Q Consensus       599 e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~k  662 (813)
                      ||+++++|.+++...                ..+++..++.++.|++.||+|||+   .+|+||||||+|||+++++.+|
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEE
Confidence            999999999998643                247788999999999999999995   4999999999999999999999


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||++........   ......+..|+|||.+.+..++.++||||||+++|||++ |..||......+..       .
T Consensus       160 l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~-------~  229 (297)
T cd05089         160 IADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELY-------E  229 (297)
T ss_pred             ECCcCCCccccceec---cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------H
Confidence            999999864321111   111223557999999988889999999999999999998 99999654322110       1


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP  802 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p  802 (813)
                      .....         ............+.+++.+||+.+|.+||++.++++.|+++.....+
T Consensus       230 ~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         230 KLPQG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             HHhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            11110         00001112356788999999999999999999999999887765433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.4e-34  Score=308.05  Aligned_cols=263  Identities=24%  Similarity=0.389  Sum_probs=206.2

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccC-CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeec-CCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~  593 (813)
                      ....+.+.+.||+|+||.||+|...... .....|++|++.... ....+.+.+|+.++++++|+||+++++++.+ +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            3456777899999999999999986321 136789999886432 2234568889999999999999999998866 567


Q ss_pred             eEEEEeecCCCchhhhhhcc--------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEee
Q 045343          594 RLLVYEFLNNGTLASFLFGN--------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD  665 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~--------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~D  665 (813)
                      .++++||+++++|.+++...        ..+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence            89999999999999998643        457899999999999999999995   4999999999999999999999999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ||+++.+.............++..|+|||.+.+..++.++||||||+++||+++ |+.||......+   +....    .
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~  233 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYL----K  233 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHH----H
Confidence            999987654332221223346778999999988889999999999999999999 999997543221   11111    1


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+.         .......+++.+.+++.+||+.+|++|||+.++++.|+.+.+
T Consensus       234 ~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         234 DGY---------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             cCC---------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            110         000111235678999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.9e-34  Score=306.96  Aligned_cols=245  Identities=27%  Similarity=0.327  Sum_probs=194.3

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||+||++...   .+++.+|||++.....   ...+.+..|+.++++++|+||+++.+++..+...++||||+++
T Consensus         1 lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   77 (280)
T cd05608           1 LGKGGFGEVSACQMR---ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNG   77 (280)
T ss_pred             CCCCCceeEEEEEEc---cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence            799999999999874   3567899999864321   1234567899999999999999999999999999999999999


Q ss_pred             Cchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          604 GTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       604 gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+|.+++..    ...+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||++..+...... 
T Consensus        78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-  153 (280)
T cd05608          78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-  153 (280)
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-
Confidence            999988743    3468899999999999999999995   49999999999999999999999999999876543221 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..........  . ....        +......  
T Consensus       154 -~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~--~-~~~~--------~~~~~~~--  219 (280)
T cd05608         154 -TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK--E-LKQR--------ILNDSVT--  219 (280)
T ss_pred             -ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH--H-HHHh--------hcccCCC--
Confidence             233568999999999999999999999999999999999999997543211100  0 0000        0011000  


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .....+..+.+++.+||+.||++||     ++++++++
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            1113456788999999999999999     78888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2e-34  Score=302.51  Aligned_cols=251  Identities=28%  Similarity=0.409  Sum_probs=201.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|++|.||+|.+.........+|||.++.... ...+++..|+.++++++|+||+++++++.+ ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            478999999999999865444455799999976544 445678999999999999999999999988 889999999999


Q ss_pred             CchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc-e
Q 045343          604 GTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-I  680 (813)
Q Consensus       604 gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~  680 (813)
                      ++|.+++....  .+++...+.++.|+++||+|||+   .+++|+||||+||+++.++.+||+|||+++.+....... .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM  156 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence            99999997654  68999999999999999999995   599999999999999999999999999998775432211 1


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                      .....++..|+|||.+.+..++.++||||||++++||++ |+.||......+..   .....   ..  ...       .
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~~---~~--~~~-------~  221 (257)
T cd05040         157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL---KKIDK---EG--ERL-------E  221 (257)
T ss_pred             ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHHh---cC--CcC-------C
Confidence            123457789999999998899999999999999999999 99998644332211   11100   00  000       0


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .....+..+.+++.+|++.+|.+||++.+|++.|.
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11123567889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.4e-34  Score=313.38  Aligned_cols=242  Identities=28%  Similarity=0.341  Sum_probs=192.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeec-cccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   ..+..||||.++...   ......+..|..++.. ++||||+++++++.+.+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey   77 (316)
T cd05619           1 KMLGKGSFGKVFLAELK---GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY   77 (316)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence            46999999999999874   356789999987532   2223445667777765 4899999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--  152 (316)
T cd05619          78 LNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK--  152 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc--
Confidence            9999999999887788999999999999999999995   49999999999999999999999999998754322111  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||..|+|||++.+..++.++|||||||++|||++|+.||......+..   ..    .....      +..    
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~---~~----i~~~~------~~~----  215 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELF---QS----IRMDN------PCY----  215 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHH---HH----HHhCC------CCC----
Confidence            23456899999999999989999999999999999999999999754322111   11    11000      000    


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMK-KVLQ  791 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~  791 (813)
                      .......+.+++.+||+.||.+||++. ++.+
T Consensus       216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            112345678999999999999999997 6654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=8.2e-35  Score=322.03  Aligned_cols=254  Identities=19%  Similarity=0.249  Sum_probs=200.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+++.+.||+|+||.||++...   ..+..+|||.++...   ....+.+.+|+.+++.++|+||+++++++.+++..
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHK---SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            456778899999999999999874   356789999986421   22334577899999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||||+++|+|.+++... .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence            9999999999999988654 57888888999999999999995   5999999999999999999999999999987653


Q ss_pred             CcccceeecccccccccCcccccCC----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ..... .....||+.|+|||.+.+.    .++.++|||||||++|||++|+.||.........      ........   
T Consensus       195 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~------~~i~~~~~---  264 (370)
T cd05596         195 NGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY------SKIMDHKN---  264 (370)
T ss_pred             CCccc-CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH------HHHHcCCC---
Confidence            32211 2345699999999998654    3788999999999999999999999754432110      01111000   


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  792 (813)
                          .+..+.....+..+.+++.+||+.+|.+  ||+++|++++
T Consensus       265 ----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         265 ----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             ----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                0111111234577889999999999988  9999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.6e-34  Score=315.84  Aligned_cols=267  Identities=28%  Similarity=0.415  Sum_probs=207.9

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccC----CcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      ++....+.+.+.||+|+||.||++......    .....||+|.++... ....+++.+|+++++++ +|+||+++++++
T Consensus         8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (334)
T cd05100           8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC   87 (334)
T ss_pred             ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence            455667888999999999999999764322    123478999886432 22346788999999999 799999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      .++...++++||+++|+|.+++...                ..+++..+..++.||++||.|||+   .+++||||||+|
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~N  164 (334)
T cd05100          88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARN  164 (334)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccce
Confidence            9999999999999999999998642                246788999999999999999995   599999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ||++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....++
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  244 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE  244 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999986643322111122334567999999999889999999999999999998 888886543222


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ..       ..........         ........+.+++.+||+.+|.+||++.|+++.|+.+....
T Consensus       245 ~~-------~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         245 LF-------KLLKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             HH-------HHHHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence            11       1111111000         11123567889999999999999999999999999887443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.9e-34  Score=294.04  Aligned_cols=262  Identities=26%  Similarity=0.341  Sum_probs=201.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCC-cceEEeEeecCC---
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKN-LVRLLGFCDEGQ---  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~---  592 (813)
                      ..++..++||+|+||+||+|....   .+..||+|++....+  .......+|+.++++++|+| ||+|.+++...+   
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~---~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKR---TGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEec---CCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence            345556789999999999999853   568999999976543  23455789999999999999 999999998877   


Q ss_pred             ---ceEEEEeecCCCchhhhhhccC----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEee
Q 045343          593 ---NRLLVYEFLNNGTLASFLFGNL----KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD  665 (813)
Q Consensus       593 ---~~~lV~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~D  665 (813)
                         ..+||+||++. +|..++....    .++...+..++.||++||+|||+   .+|+||||||+||||++++.+||+|
T Consensus        88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaD  163 (323)
T KOG0594|consen   88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLAD  163 (323)
T ss_pred             ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeec
Confidence               78899999855 8888886543    46678899999999999999995   4999999999999999999999999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ||+|+...-....  .+..++|..|.|||++.+. .|+...||||+||++.||++++..|.+..+.+..   ..+.+.+.
T Consensus       164 FGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql---~~If~~lG  238 (323)
T KOG0594|consen  164 FGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQL---FRIFRLLG  238 (323)
T ss_pred             cchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHH---HHHHHHcC
Confidence            9999966532221  3445689999999999887 6899999999999999999999999876653322   12222221


Q ss_pred             c---Ccccc---ccccc-----cccccc--H---HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 N---EKLDD---LVEGD-----MEALND--I---KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~---~~~~~---~~~~~-----~~~~~~--~---~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .   +....   +.+..     ......  .   .......+++.+||+.+|.+|.|++.++.+
T Consensus       239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            1   11111   11111     000000  0   111467899999999999999999999987

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-34  Score=301.37  Aligned_cols=251  Identities=33%  Similarity=0.494  Sum_probs=204.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-chhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.||+|+||.||++........+..++||.++...... .+++.+|++++.+++|+||+++++++......++|+||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            47999999999999986432347789999997643332 56789999999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          604 GTLASFLFGN---------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       604 gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++|.+++...         ..+++..+..++.|+++||+|||+   .+++|+||||+||+++.++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999875         778999999999999999999995   5999999999999999999999999999988765


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...........++..|+|||.+....++.++||||||++++||++ |..||......+.   .    .......      
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~----~~~~~~~------  224 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV---L----EYLRKGY------  224 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHH---H----HHHHcCC------
Confidence            432222334557889999999988889999999999999999999 6999875532211   1    1111100      


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                         ........+..+.+++.+||+.+|.+||++.|++++|+
T Consensus       225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         225 ---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               00111223578899999999999999999999999884

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2.7e-34  Score=303.36  Aligned_cols=257  Identities=22%  Similarity=0.352  Sum_probs=204.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||++...   .++..++||.+....   .....++.+|+.+++.++|+||+++++++.+++..++
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~---~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCL---LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeec---CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEE
Confidence            4567789999999999999864   356789999876422   1223568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      +|||+++++|.+++..    ...+++..++.++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++...
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            9999999999998863    3567899999999999999999995   49999999999999999999999999998876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....++..|+|||++.+..++.++|+||||+++|||++|..||.....+... +..    .     +....
T Consensus       157 ~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~----~-----~~~~~  224 (267)
T cd08229         157 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCK----K-----IEQCD  224 (267)
T ss_pred             ccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH-Hhh----h-----hhcCC
Confidence            433221  22346888999999999888999999999999999999999998643322111 100    0     00000


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      .+..   ......+.+.+++.+||+.+|.+||||.+|++.++++.
T Consensus       225 ~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         225 YPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             CCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            1111   11234678899999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.2e-34  Score=317.85  Aligned_cols=263  Identities=25%  Similarity=0.381  Sum_probs=201.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecC-C
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG-Q  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~  592 (813)
                      ...+.+.+.||+|+||.||+|....  ....++.||||+++.... .....+.+|+.++.++ +|+||+++++++... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            4567888999999999999997532  223567899999975322 2234678899999999 689999999988654 4


Q ss_pred             ceEEEEeecCCCchhhhhhcc-----------------------------------------------------------
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-----------------------------------------------------------  613 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-----------------------------------------------------------  613 (813)
                      ..++|+||+++|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            678999999999999988542                                                           


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeeccc
Q 045343          614 --------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR  685 (813)
Q Consensus       614 --------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~  685 (813)
                              ..+++..+.+++.||++||+|||+   .+|+||||||+|||++.++.+||+|||++................
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                    135778888999999999999995   599999999999999999999999999998754332211122234


Q ss_pred             ccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHH
Q 045343          686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKC  764 (813)
Q Consensus       686 gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  764 (813)
                      ++..|+|||.+.+..++.++||||||+++|||++ |..|+........  +.    ...........         ....
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~----~~~~~~~~~~~---------~~~~  307 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC----RRLKEGTRMRA---------PDYT  307 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HH----HHHhccCCCCC---------CCCC
Confidence            5678999999988889999999999999999997 8888864332111  10    11111110000         0012


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          765 VEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       765 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ...+.+++..||+.+|.+||++.||+++|+.+++
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            3568899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.5e-34  Score=313.13  Aligned_cols=242  Identities=26%  Similarity=0.315  Sum_probs=191.2

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeec-cccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   ..+..||||.++...   ....+.+..|..++.. .+|+||+++++++..++..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~   77 (316)
T cd05592           1 KVLGKGSFGKVMLAELK---GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY   77 (316)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            46999999999999874   356789999987532   1223344556666654 4899999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......  .
T Consensus        78 ~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~--~  152 (316)
T cd05592          78 LNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--K  152 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--c
Confidence            9999999999888889999999999999999999995   5999999999999999999999999999986543221  1


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......+..      ... ....      +.    .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~------~~i-~~~~------~~----~  215 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF------DSI-LNDR------PH----F  215 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH------HHH-HcCC------CC----C
Confidence            33456899999999999988999999999999999999999999754332111      010 0000      00    0


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMK-KVLQ  791 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~  791 (813)
                      +......+.+++.+||+.||.+||++. ++++
T Consensus       216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            112346678999999999999999875 5544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.1e-34  Score=302.23  Aligned_cols=253  Identities=29%  Similarity=0.440  Sum_probs=200.8

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.+.++||+|+||.||+|...    +...||+|+++.. ....+++.+|++++++++|+||+++++++.+ ...++|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~----~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv   78 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV   78 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEec----CCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEE
Confidence            355788899999999999999764    2346999998753 2234578999999999999999999998754 567999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++..+..++.|+++||+|||+   .+++|+||||+||++++++.+||+|||.++.....
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~  155 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  155 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence            9999999999999753  457899999999999999999995   59999999999999999999999999999876533


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+..       ......        
T Consensus       156 ~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~-------~~~~~~--------  219 (262)
T cd05071         156 EYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQVERG--------  219 (262)
T ss_pred             cccc-ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH-------HHHhcC--------
Confidence            2211 122346678999999988889999999999999999999 88888644322110       110000        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                       .......+.++.+.+++.+|++.+|++||++.++++.|+..
T Consensus       220 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         220 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             -CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence             00011223467789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.3e-34  Score=313.72  Aligned_cols=241  Identities=26%  Similarity=0.319  Sum_probs=191.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeec-cccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   ..+..||||.++...   ......+..|..++.. .+|+||+++++++.+++..++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   77 (316)
T cd05620           1 KVLGKGSFGKVLLAELK---GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF   77 (316)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence            46999999999999874   356789999987532   2233446667777765 4899999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++.......  .
T Consensus        78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~  152 (316)
T cd05620          78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--R  152 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC--c
Confidence            9999999999888888999999999999999999995   5999999999999999999999999999875322211  1


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||..|+|||++.+..++.++|||||||++|||++|+.||........   .+    .....      .+..    
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~---~~----~~~~~------~~~~----  215 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL---FE----SIRVD------TPHY----  215 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HH----HHHhC------CCCC----
Confidence            3346689999999999999999999999999999999999999975432211   11    11100      0001    


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMK-KVL  790 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl  790 (813)
                      .......+.+++.+||+.||.+||++. +++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         216 PRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            111346778999999999999999984 665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=320.19  Aligned_cols=252  Identities=20%  Similarity=0.256  Sum_probs=198.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.+.||+|+||+||++...   ..++.||||++....   ......+.+|+.++..++|+||+++++.+.+++..++|
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKK---DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence            456789999999999999874   356789999997532   22334578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  156 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR  156 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence            9999999999999888889999999999999999999995   4999999999999999999999999999876532211


Q ss_pred             cc------------------------------------eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 045343          678 KA------------------------------------IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR  721 (813)
Q Consensus       678 ~~------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~  721 (813)
                      ..                                    ......||+.|+|||++....++.++|||||||++|||++|.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~  236 (364)
T cd05599         157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY  236 (364)
T ss_pred             ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence            00                                    011245899999999999989999999999999999999999


Q ss_pred             cCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 045343          722 KSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQM  792 (813)
Q Consensus       722 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  792 (813)
                      .||......+..   .   ......  ..     +.........+.+.+++.+|+. +|.+|++   +.|++++
T Consensus       237 ~Pf~~~~~~~~~---~---~i~~~~--~~-----~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         237 PPFCSDNPQETY---R---KIINWK--ET-----LQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCCCHHHHH---H---HHHcCC--Cc-----cCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            999754432110   0   010000  00     0001111234677888888986 9999998   9888874

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=321.54  Aligned_cols=252  Identities=23%  Similarity=0.245  Sum_probs=196.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |.+.++||+|+||+||++...   ..++.||||++....   ....+.+.+|++++++++|+||+++++++.+....++|
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv   79 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKK---DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI   79 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence            456789999999999999874   366789999986432   22345678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~  156 (377)
T cd05629          80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD  156 (377)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            9999999999999888888999999999999999999995   5999999999999999999999999999964321100


Q ss_pred             c---------------------------------------------ceeecccccccccCcccccCCCCCCccchhhHHH
Q 045343          678 K---------------------------------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGV  712 (813)
Q Consensus       678 ~---------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gv  712 (813)
                      .                                             .......||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  236 (377)
T cd05629         157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA  236 (377)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence            0                                             0001246899999999999989999999999999


Q ss_pred             HHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCC---CCHHHH
Q 045343          713 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR---PTMKKV  789 (813)
Q Consensus       713 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~ev  789 (813)
                      ++|||++|+.||......+...      ......  ..     +...........+.+++.+||+ +|.+|   +++.|+
T Consensus       237 il~elltG~~Pf~~~~~~~~~~------~i~~~~--~~-----~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~  302 (377)
T cd05629         237 IMFECLIGWPPFCSENSHETYR------KIINWR--ET-----LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI  302 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHH------HHHccC--Cc-----cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence            9999999999997544322110      000000  00     0001111234667889999997 66665   699999


Q ss_pred             HHH
Q 045343          790 LQM  792 (813)
Q Consensus       790 l~~  792 (813)
                      +++
T Consensus       303 l~h  305 (377)
T cd05629         303 KSH  305 (377)
T ss_pred             hcC
Confidence            886

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.1e-34  Score=312.69  Aligned_cols=258  Identities=29%  Similarity=0.445  Sum_probs=199.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+++.+.||+|+||.||+|....+ .....+++|+++... ....+++.+|++++.++ +|+||+++++++.+++..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccC-CceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            4567789999999999999987532 223457888776432 23345688899999999 89999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          597 VYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      |+||+++++|.+++...                ..+++..++.++.||++||+|||+   .+++||||||+|||++.++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCc
Confidence            99999999999998643                246888999999999999999995   59999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  739 (813)
                      +||+|||+++.......   ......+..|+|||.+.+..++.++||||||++++||+| |..||......+..   .  
T Consensus       163 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~--  234 (303)
T cd05088         163 AKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---E--  234 (303)
T ss_pred             EEeCccccCcccchhhh---cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH---H--
Confidence            99999999864321111   111224567999999988889999999999999999998 99998644322111   0  


Q ss_pred             HHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                        .....         ............+.+++.+||+.+|++||++.+++++|+++.+-
T Consensus       235 --~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         235 --KLPQG---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             --HHhcC---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence              01100         00001112345788999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-34  Score=297.54  Aligned_cols=267  Identities=24%  Similarity=0.329  Sum_probs=214.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .++.+.||+|.-|+||++.+.   ..+...|+|++.+..   .+...+.+.|-+||+.++||.|+.|++.++.++-.+||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~---~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELR---GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEec---CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            445688999999999999985   345899999997643   33445678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc-
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-  674 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~-  674 (813)
                      ||||+||+|...++.+  ..+++..++-++..++-||+|||   ..|||+|||||+||||.++|++-|+||.|+..... 
T Consensus       156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            9999999999998765  57899999999999999999999   56999999999999999999999999998753310 


Q ss_pred             --------------------------------Cccc---------------------ceeecccccccccCcccccCCCC
Q 045343          675 --------------------------------NQSK---------------------AIRTAIRGTKGYVAPEWFRNSTI  701 (813)
Q Consensus       675 --------------------------------~~~~---------------------~~~~~~~gt~~y~aPE~l~~~~~  701 (813)
                                                      ....                     .....++||-.|+|||++.+...
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                            0000                     00123579999999999999999


Q ss_pred             CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCC
Q 045343          702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPS  781 (813)
Q Consensus       702 ~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~  781 (813)
                      +.++|.|+|||++||||.|..||.+...++.               +..++...+..+...+.+..+.+||++.|.+||.
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T---------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET---------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhh---------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence            9999999999999999999999987664432               2333444444444446678899999999999999


Q ss_pred             CCCC----HHHHHHH--Hhc----CcCCCCCCC-CCCC
Q 045343          782 LRPT----MKKVLQM--LEG----VVEVSLPPN-PYPF  808 (813)
Q Consensus       782 ~RPt----~~evl~~--L~~----~~~~~~p~~-p~~~  808 (813)
                      +|.-    +.||.++  .++    ++....||. |.+.
T Consensus       378 kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~  415 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV  415 (459)
T ss_pred             hhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence            9998    8888765  233    444444544 5544

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.8e-34  Score=301.15  Aligned_cols=252  Identities=28%  Similarity=0.420  Sum_probs=199.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+++.++||+|+||.||+|...    ++..+|+|.++... ...+.+.+|+.++++++|+|++++++++. ....++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv   78 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN----GNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIV   78 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec----CCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEE
Confidence            345778899999999999999764    44569999987532 23467899999999999999999999885 4568999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++..++.++.|++.||+|||+.   +++|+||||+||++++++.++|+|||++..+...
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence            9999999999998753  4578999999999999999999954   8999999999999999999999999999876433


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+.   ....    ...        
T Consensus       156 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~~----~~~--------  219 (260)
T cd05070         156 EYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV---LEQV----ERG--------  219 (260)
T ss_pred             cccc-ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH---HHHH----HcC--------
Confidence            2111 122335668999999988889999999999999999999 8888865432211   1111    000        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                       .........+..+.+++.+|++.+|.+|||+.++.+.|++
T Consensus       220 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         220 -YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             -CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence             0001112335678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-34  Score=301.80  Aligned_cols=248  Identities=29%  Similarity=0.421  Sum_probs=203.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+++.+.||+|+||.||+|..     .++.|+||.++.... ..+++.+|+.++++++|+||+++++++......++|+
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDY-----RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhccceeeeecCCCceEEEEEe-----cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence            4567789999999999999986     467899999976533 4567899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++....  .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~  156 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ  156 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence            9999999999997654  68999999999999999999995   499999999999999999999999999998764321


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .     ....+..|+|||.+....++.++||||||++++||++ |..||.....+.   +.    ..........     
T Consensus       157 ~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~----~~~~~~~~~~-----  219 (256)
T cd05039         157 D-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PHVEKGYRME-----  219 (256)
T ss_pred             c-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HH----HHHhcCCCCC-----
Confidence            1     2234668999999988889999999999999999997 999886443221   11    1111110000     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                          .....++.+.+++.+||+.+|.+||++.|++++|+.+
T Consensus       220 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         220 ----APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             ----CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                0112357788999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.4e-34  Score=308.45  Aligned_cols=274  Identities=24%  Similarity=0.398  Sum_probs=206.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEecc-CCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeec--CCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTT-RTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~-~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~  594 (813)
                      ..+.+.+.||+|+||.||++..... ...+..+|||.++..... ..+++.+|++++++++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            3456678999999999999987532 345788999999754332 35679999999999999999999999877  5578


Q ss_pred             EEEEeecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ++|+||+++++|.+++.... .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++....
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            99999999999999997654 68999999999999999999995   599999999999999999999999999998876


Q ss_pred             cCcccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... ......++..|+|||.+.+..++.++||||||++++||++|+.|+............. .........+.+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  239 (284)
T cd05038         161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQGQMIVTRLLELL  239 (284)
T ss_pred             cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccccccHHHHHHHH
Confidence            332211 1112335567999999988889999999999999999999999886432211000000 00000000000011


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ...........++..+.+++.+||+.+|.+|||+.||+++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            11111111223457789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=4.3e-34  Score=300.34  Aligned_cols=250  Identities=27%  Similarity=0.405  Sum_probs=196.7

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      +||+|+||.||+|.+... ..+..||||.+..... ...+++.+|+.++++++|+||+++++++. .+..++|+||++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~-~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMR-KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecC-CCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence            489999999999987432 2456799999865432 22356889999999999999999999885 45789999999999


Q ss_pred             chhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce-ee
Q 045343          605 TLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-RT  682 (813)
Q Consensus       605 sL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~-~~  682 (813)
                      +|.+++.. ...+++..+++++.||+.||.|||+   .+++|+||||+||+++.++.+||+|||+++.......... ..
T Consensus        80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05115          80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS  156 (257)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence            99999975 4578999999999999999999995   4999999999999999999999999999986544322111 11


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ...++..|+|||.+.+..++.++||||||+++||+++ |..||......+..       .......         ....+
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-------~~~~~~~---------~~~~~  220 (257)
T cd05115         157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM-------SFIEQGK---------RLDCP  220 (257)
T ss_pred             CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH-------HHHHCCC---------CCCCC
Confidence            1224578999999988889999999999999999996 99998754332211       1111111         01111


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..+.+.+.+++..||+.+|++||++.+|.+.|+.+
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            23457888999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.7e-34  Score=314.43  Aligned_cols=250  Identities=24%  Similarity=0.296  Sum_probs=195.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||+||++...   ..++.+|||+++....   ...+.+..|+.++.++ +|+||+++++++.+.+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   77 (327)
T cd05617           1 RVIGRGSYAKVLLVRLK---KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY   77 (327)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence            46999999999999874   3567899999975321   2234577888888888 699999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|..++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--  152 (327)
T cd05617          78 VNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--  152 (327)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc--
Confidence            9999999999887889999999999999999999995   49999999999999999999999999998753322111  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......................        ...  
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~~~--  222 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------IRI--  222 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------CCC--
Confidence            3345699999999999999999999999999999999999999964332211111111111111111        110  


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTM------KKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  792 (813)
                      +......+.+++.+||+.||.+|+++      .+++++
T Consensus       223 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         223 PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            11234667899999999999999984      566654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.2e-34  Score=302.44  Aligned_cols=254  Identities=26%  Similarity=0.380  Sum_probs=192.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||+|.... ......+++|+++.... .....+.+|+.++++++|+||+++++++.+....++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNS-GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcC-CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            469999999999998743 33456799998865432 2334688899999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          604 GTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       604 gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+|.+++...     ...++..+..++.|+++||+|||+   .+++|+||||+||+++.++.+||+|||++.........
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~  156 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY  156 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence            9999999643     245677888999999999999995   59999999999999999999999999999764433221


Q ss_pred             ceeecccccccccCcccccCC-------CCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS-------TITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~-------~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .......++..|+|||++...       .++.++||||||+++|||++ |+.||......+...   .   .. .+....
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~---~---~~-~~~~~~  229 (269)
T cd05087         157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT---Y---TV-REQQLK  229 (269)
T ss_pred             ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH---H---Hh-hcccCC
Confidence            112234577889999998642       35789999999999999996 999996543222110   0   00 111111


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      +.++....    ...+.+.+++..|+ .+|++|||++||++.|+
T Consensus       230 ~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         230 LPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            22222111    22456778999998 58999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=4.2e-34  Score=306.97  Aligned_cols=265  Identities=24%  Similarity=0.378  Sum_probs=201.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEec-------------cCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT-------------TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~-------------~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      ..+.+.++||+|+||.||++....             ...+...+|+|+++... .....++.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            346788999999999999985421             12244579999987542 2234578999999999999999999


Q ss_pred             EeEeecCCceEEEEeecCCCchhhhhhccC-----------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNL-----------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       585 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      ++++..++..++|+||+++++|.+++....           .+++..++.++.|++.||+|||+   .+++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence            999999999999999999999999986532           35678899999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh--CCcCCCcccchh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS--CRKSFDIEMGEE  731 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt--G~~p~~~~~~~~  731 (813)
                      |++.++.++|+|||+++.+.............++..|+|||......++.++||||||+++|||++  |..||......+
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            999999999999999987643322111222334678999999888889999999999999999998  667776433222


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      ..   ................      .....++..+.+++.+||+.||.+||++.||++.|++
T Consensus       242 ~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         242 VI---ENTGEFFRDQGRQVYL------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HH---HHHHHHHhhccccccC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            11   1011111110000000      0112245788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-34  Score=304.08  Aligned_cols=250  Identities=26%  Similarity=0.324  Sum_probs=199.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ++..+.||+|+||+||++...   .++..||||+++...   ......+.+|+.++++++|+||+++++.+..++..++|
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEc---CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence            566789999999999999874   356789999986432   12234577899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++|+|.+++...  ..+++..+..++.|++.||.|||+   .+|+|+||||+||++++++.++|+|||+++.....
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            9999999999888643  468999999999999999999995   49999999999999999999999999999875432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....|+..|+|||++.+..++.++||||||+++|||++|+.||.........   +..........        
T Consensus       156 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~--------  221 (285)
T cd05605         156 ET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKEDQ--------  221 (285)
T ss_pred             Cc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhhcc--------
Confidence            21   22346899999999999888999999999999999999999999754332111   00011000000        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                        ..........+.+++..||+.||.+||     ++++++++
T Consensus       222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             --cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence              001123456788999999999999999     88899765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.1e-34  Score=313.37  Aligned_cols=247  Identities=25%  Similarity=0.297  Sum_probs=196.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecccc-CCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~l  596 (813)
                      +.+.+.||+|+||.||+|...   ..++.||||+++...   ....+.+..|.+++..++| ++|+++++++.+.+..++
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERK---GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence            467789999999999999874   356789999987532   2234567788888888876 568889999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence            99999999999999888888999999999999999999995   499999999999999999999999999987533221


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....||..|+|||++.+..++.++|||||||++|||++|+.||......+..   ..    .....        .
T Consensus       156 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~---~~----i~~~~--------~  218 (324)
T cd05587         156 KT--TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF---QS----IMEHN--------V  218 (324)
T ss_pred             Cc--eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH---HH----HHcCC--------C
Confidence            11  23456899999999999999999999999999999999999999754322111   10    01100        0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTM-----KKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  792 (813)
                      .  ........+.+++.+||+.||.+|++.     .+++++
T Consensus       219 ~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         219 S--YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             C--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            0  011234678899999999999999976     566654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=313.75  Aligned_cols=250  Identities=23%  Similarity=0.328  Sum_probs=209.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCc-eE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN-RL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-~~  595 (813)
                      ..|+..+.+|+|+||.++.....   .+...+++|++....  ....+....|+.++++++|||||.+.+.+.+++. .+
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk---~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~   80 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHK---SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC   80 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhc---cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence            35677899999999999987664   466789999986532  2333457889999999999999999999999988 99


Q ss_pred             EEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||+|++||+|.+.+...  ..++++.+.+++.|++.|+.|||+   ..|+|||||+.|||++.+..+||.|||+|+.+.
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~  157 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN  157 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence            999999999999999764  467899999999999999999995   499999999999999999999999999999988


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      +....  .....||+.|+.||.+.+.+|..|+|||||||++|||++-+++|.......   +.   ..         +..
T Consensus       158 ~~~~~--a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~---Li---~k---------i~~  220 (426)
T KOG0589|consen  158 PEDSL--ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE---LI---LK---------INR  220 (426)
T ss_pred             Cchhh--hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH---HH---HH---------Hhh
Confidence            76532  456789999999999999999999999999999999999999998654321   11   11         111


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .. ..+.+..+..++..++..|++.+|..||++.+++.+
T Consensus       221 ~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  221 GL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            11 122334567889999999999999999999999875

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.9e-34  Score=302.23  Aligned_cols=254  Identities=26%  Similarity=0.507  Sum_probs=195.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeec-CCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~e~~~  602 (813)
                      +.||+|+||.||+|...........+|||++.... ....+.+.+|+.+++.++|+||+++++++.. +...++|+||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999976544556789999985432 2234578889999999999999999998754 456889999999


Q ss_pred             CCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc--
Q 045343          603 NGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA--  679 (813)
Q Consensus       603 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~--  679 (813)
                      +++|.+++... ..+++..+..++.||++||+|||+   .+++||||||+|||+++++.+||+|||+++.........  
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence            99999999764 456788889999999999999995   499999999999999999999999999997654321111  


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhC-CcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISC-RKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      ......++..|+|||.+.+..++.++||||||+++|||++| ..|+......+   +...   ......   .       
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~~~---~~~~~~---~-------  221 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---ITVY---LLQGRR---L-------  221 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH---HhcCCC---C-------
Confidence            01123457789999999888899999999999999999995 45554322111   1111   111100   0       


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ......+..+.+++..||+.+|++||++.||++.|+.+.
T Consensus       222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            001123467889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.1e-34  Score=320.09  Aligned_cols=268  Identities=19%  Similarity=0.214  Sum_probs=203.5

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      .+....|++.++||+|+||.||++... +...+..|+||.+...     +...+|++++++++|+||+++++++......
T Consensus        88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~-~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         88 SVVRMQYNILSSLTPGSEGEVFVCTKH-GDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTV  161 (392)
T ss_pred             hhccCceEEEEeecCCCCeEEEEEEEc-CCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence            344456888899999999999999753 2335678999987542     3456899999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++|||++. ++|.+++.....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus       162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            99999986 6888888777789999999999999999999995   4999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc-----
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD-----  749 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-----  749 (813)
                      ...........||..|+|||++.+..++.++|||||||++|||++|+.||..............+..........     
T Consensus       238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~  317 (392)
T PHA03207        238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG  317 (392)
T ss_pred             ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence            433222334579999999999999999999999999999999999999997543321111101111111100000     


Q ss_pred             ---------cc---cccccccc---ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 ---------DL---VEGDMEAL---NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ---------~~---~~~~~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                               ..   ..+.....   ........+.+++.+||+.||++|||+.|++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                     00   00000000   001224567889999999999999999999987

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.9e-34  Score=329.46  Aligned_cols=252  Identities=24%  Similarity=0.308  Sum_probs=199.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCC----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  592 (813)
                      ..|.+.+.||+|+||+||++...   .+++.||||.+...  .......+.+|+.++..++|+||+++...+...+    
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRV---SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEc---CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            35778899999999999999864   35779999998643  2233456788999999999999999988764432    


Q ss_pred             ----ceEEEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEe
Q 045343          593 ----NRLLVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       593 ----~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~  664 (813)
                          ..++||||+++|+|.+++...    ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence                267999999999999998643    467899999999999999999995   599999999999999999999999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      |||+++.+.............||+.|+|||++.+..++.++||||||+++|||++|+.||......+.      .... .
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~------~~~~-~  258 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV------MHKT-L  258 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH------HHHH-h
Confidence            99999876543332223446799999999999998999999999999999999999999975432211      1111 1


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ......         ........+.+++..||+.||.+||++.+++++
T Consensus       259 ~~~~~~---------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        259 AGRYDP---------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             cCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            111110         111345678899999999999999999999875

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.3e-34  Score=312.87  Aligned_cols=247  Identities=24%  Similarity=0.299  Sum_probs=195.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  596 (813)
                      +++.+.||+|+||.||+|...   ..+..+|||.++...   ....+.+..|..++..+ +|++|+++++++.+.+..++
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERK---GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence            456789999999999999874   356789999987532   12233456677777766 58999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~  155 (323)
T cd05616          79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG  155 (323)
T ss_pred             EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence            99999999999999888889999999999999999999995   499999999999999999999999999997543222


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........   ....    ..        ..
T Consensus       156 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~---~~i~----~~--------~~  218 (323)
T cd05616         156 VT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF---QSIM----EH--------NV  218 (323)
T ss_pred             Cc--cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHH---HHHH----hC--------CC
Confidence            11  23456899999999999999999999999999999999999999754432111   1110    11        00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTM-----KKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  792 (813)
                      .  .+......+.+++.+||+.+|.+|++.     .++.++
T Consensus       219 ~--~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         219 A--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             C--CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence            0  011235678899999999999999984     666543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.8e-34  Score=310.14  Aligned_cols=264  Identities=22%  Similarity=0.309  Sum_probs=201.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||+|+||.||++...   ..+..+++|.++... .....++.+|++++.+++|+||+++++++.+++..++|+|
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHR---PSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEc---CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            456789999999999999874   356788999876432 2223568899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.....+++..+..++.|+++||.|||+  ..+++|+||||+|||++.++.+||+|||++.......   
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---  154 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---  154 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc---
Confidence            99999999999888888999999999999999999995  2489999999999999999999999999987654321   


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC-c-----------
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE-K-----------  747 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-~-----------  747 (813)
                       .....++..|+|||.+.+..++.++||||||+++|||++|+.||...................... .           
T Consensus       155 -~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         155 -ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             -cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence             233568899999999988889999999999999999999999986443221111000000000000 0           


Q ss_pred             ---------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          748 ---------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       748 ---------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                               ...+................+.+++.+||+.+|++||++.+|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence                     0000000000000112345789999999999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.6e-34  Score=313.30  Aligned_cols=243  Identities=24%  Similarity=0.316  Sum_probs=195.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||++...   .++..+|||.++...   ......+..|..++..+ +|+||+++++++...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~   77 (318)
T cd05570           1 KVLGKGSFGKVLLAELK---GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY   77 (318)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            46999999999999874   356789999987532   22334567788888777 799999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|..++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--  152 (318)
T cd05570          78 VNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--  152 (318)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc--
Confidence            9999999999888889999999999999999999995   59999999999999999999999999998753322211  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....|+..|+|||++.+..++.++|||||||++|||++|+.||.........       ........        .  .
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~-------~~i~~~~~--------~--~  215 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF-------QSILEDEV--------R--Y  215 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH-------HHHHcCCC--------C--C
Confidence            23346899999999999999999999999999999999999999754322111       11111100        0  0


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTM-----KKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  792 (813)
                      .......+.+++.+||+.||.+||++     .+++++
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            11235678899999999999999999     888764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7e-35  Score=318.09  Aligned_cols=251  Identities=22%  Similarity=0.241  Sum_probs=199.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.+.||+|+||+||++...   ..+..+|||+++....   ...+.+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv   79 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREK---ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV   79 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence            567789999999999999874   3567899999875322   2345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++... ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||++..+....
T Consensus        80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence            9999999999999775 678999999999999999999995   599999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCccccc------CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFR------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~------~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .. ......||+.|+|||++.      ...++.++|||||||++|||++|+.||.........      ...........
T Consensus       157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~------~~i~~~~~~~~  229 (330)
T cd05601         157 MV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY------NNIMNFQRFLK  229 (330)
T ss_pred             ce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH------HHHHcCCCccC
Confidence            22 123346899999999986      456778999999999999999999999754332110      11111110000


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                             .+........+.+++..|++ +|.+||++.+++++
T Consensus       230 -------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         230 -------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             -------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence                   01111235678889999998 99999999999865

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.4e-34  Score=312.94  Aligned_cols=245  Identities=24%  Similarity=0.276  Sum_probs=192.6

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheee---eeeccccCCcceEEeEeecCCceE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVV---VIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+.+.||+|+||.||+|...   .+++.||||+++...   ....+.+..|++   ++++++|+||+++++++...+..+
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYK---KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             eEEEEEeecCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence            46789999999999999874   356789999997532   122234555554   456778999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++++|..++.. ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05589          79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF  154 (324)
T ss_pred             EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence            99999999999988754 468999999999999999999995   59999999999999999999999999998754322


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....|++.|+|||.+.+..++.++|||||||++|||++|+.||......+..      ..... ..        
T Consensus       155 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~------~~i~~-~~--------  217 (324)
T cd05589         155 GDR--TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF------DSIVN-DE--------  217 (324)
T ss_pred             CCc--ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH------HHHHh-CC--------
Confidence            211  23456899999999999989999999999999999999999999754332111      00000 00        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ..  ........+.+++.+||+.||.+||     ++.+++++
T Consensus       218 ~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         218 VR--YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            00  0112356788999999999999999     57777664

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-34  Score=314.17  Aligned_cols=238  Identities=26%  Similarity=0.276  Sum_probs=189.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheee-eeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVV-VIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||+||+|...   .+++.||||++.....   ...+++..|.. +++.++|+||+++++.+.+.+..++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~   77 (323)
T cd05575           1 KVIGKGSFGKVLLAKHK---ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDY   77 (323)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence            46999999999999874   4678899999865321   12234444544 46778999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++.......  .
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~  152 (323)
T cd05575          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--T  152 (323)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--c
Confidence            9999999999888889999999999999999999995   4999999999999999999999999999875432211  1


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.      ...... .        ....  
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~------~~~i~~-~--------~~~~--  215 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM------YDNILN-K--------PLRL--  215 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH------HHHHHc-C--------CCCC--
Confidence            3345689999999999998999999999999999999999999975432211      001110 0        0110  


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMK  787 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~  787 (813)
                      .......+.+++.+||+.||.+||++.
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         216 KPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            112356788999999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.1e-34  Score=321.71  Aligned_cols=260  Identities=26%  Similarity=0.343  Sum_probs=197.8

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCC-----ce
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----NR  594 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~  594 (813)
                      ++.++||+|+||.||++...   .++..||||++.....  ...+++.+|+.+++.++|+||+++++++...+     ..
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           3 EPDRPIGYGAFGVVWSVTDP---RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             cccceeeeCCCEEEEEEEEC---CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence            45688999999999999864   3577899999864321  23456889999999999999999999998776     78


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++|+||+. ++|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence            99999986 5788888777889999999999999999999995   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc---
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD---  750 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~---  750 (813)
                      ..... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||..........   .+...........   
T Consensus       156 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~i~~~~g~~~~~~~~~  231 (372)
T cd07853         156 DESKH-MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLD---LITDLLGTPSLEAMRS  231 (372)
T ss_pred             Ccccc-CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHH---HHHHHcCCCCHHHHHH
Confidence            32221 2334578999999998774 47899999999999999999999997654322111   0111100000000   


Q ss_pred             --------cc----cc-ccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 --------LV----EG-DME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 --------~~----~~-~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                              +.    .+ ...  ........+.+.+++.+||+.||.+|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                    00    00 000  00011235678899999999999999999999975

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-34  Score=303.00  Aligned_cols=250  Identities=29%  Similarity=0.447  Sum_probs=194.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      +.||+|+||.||+|.+..+. ....+++|.++... ....+.+.+|++++.++ +|+||+++++++......++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            46899999999999885321 22457888886432 23345788999999999 79999999999999999999999999


Q ss_pred             CCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeec
Q 045343          603 NGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF  666 (813)
Q Consensus       603 ~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df  666 (813)
                      +++|.+++....                .+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+||
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~df  156 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF  156 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCC
Confidence            999999986432                46789999999999999999995   59999999999999999999999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      |+++.......   ......+..|+|||++....++.++||||||++++||++ |..||......+.   .    .....
T Consensus       157 gl~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~----~~~~~  226 (270)
T cd05047         157 GLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---Y----EKLPQ  226 (270)
T ss_pred             CCccccchhhh---ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH---H----HHHhC
Confidence            99863321111   111224567999999988889999999999999999997 9999864322111   0    11111


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ..         ...........+.+++.+|++.+|.+|||+.++++.|++++
T Consensus       227 ~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         227 GY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CC---------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            00         00011123457889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.5e-34  Score=306.76  Aligned_cols=266  Identities=25%  Similarity=0.372  Sum_probs=204.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecC--Cc
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QN  593 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~  593 (813)
                      ..++.+.++||+|+||.||++.... ....+..||+|.++... ....+.+.+|++++++++|+||+++.+++...  ..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            3456778899999999999997642 23467789999986432 22345789999999999999999999998775  56


Q ss_pred             eEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .++||||+++++|.+++... ..+++..+..++.||+.||+|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            88999999999999999654 457999999999999999999995   49999999999999999999999999999876


Q ss_pred             ccCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh---------hhhhHHHHHHh
Q 045343          673 TLNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE---------YAILTDWAFDC  742 (813)
Q Consensus       673 ~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~---------~~~l~~~~~~~  742 (813)
                      ...... .......++..|+|||.+.+..++.++||||||+++|||++++.|........         ....... ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  238 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL-VRV  238 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH-HHH
Confidence            543221 11223456778999999988889999999999999999999876643221100         0000000 000


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....         .........+..+.+++.+||+.+|.+||+++++++.|+++
T Consensus       239 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         239 LEEG---------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHcC---------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            0000         00111123467899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.1e-34  Score=320.69  Aligned_cols=252  Identities=21%  Similarity=0.272  Sum_probs=194.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.++||+|+||+||+|...   ..++.+|||++....   ......+.+|+.++++++|+||+++++.+.+++..++|
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKV---DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEEC---CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence            456789999999999999874   356789999986532   22345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++.....++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~  156 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence            9999999999999887788999999999999999999995   4999999999999999999999999999753321000


Q ss_pred             ---------------------------------------------cceeecccccccccCcccccCCCCCCccchhhHHH
Q 045343          678 ---------------------------------------------KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGV  712 (813)
Q Consensus       678 ---------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gv  712 (813)
                                                                   ........||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv  236 (382)
T cd05625         157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  236 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence                                                         00012246899999999999999999999999999


Q ss_pred             HHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC---HHHH
Q 045343          713 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKV  789 (813)
Q Consensus       713 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~ev  789 (813)
                      ++|||++|+.||......+...      ......       .....+........+.+++.+++ .+|.+|++   +.|+
T Consensus       237 il~elltG~~Pf~~~~~~~~~~------~i~~~~-------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei  302 (382)
T cd05625         237 ILYEMLVGQPPFLAQTPLETQM------KVINWQ-------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI  302 (382)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHH------HHHccC-------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence            9999999999997544321110      000000       00000111122455667776665 49999997   8887


Q ss_pred             HHH
Q 045343          790 LQM  792 (813)
Q Consensus       790 l~~  792 (813)
                      +++
T Consensus       303 ~~h  305 (382)
T cd05625         303 KAH  305 (382)
T ss_pred             hcC
Confidence            764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-34  Score=309.65  Aligned_cols=255  Identities=28%  Similarity=0.348  Sum_probs=212.1

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc---chhhhheeeeeeccc-cCCcceEEeEeec
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTH-HKNLVRLLGFCDE  590 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~-h~niv~l~g~~~~  590 (813)
                      +-....|++.++||+|.||.||++....   ++..+|+|.+.+.....   ...+.+|+.+|++++ |||||.+.+.+++
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~---tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKS---TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecC---CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            3344567888999999999999998853   47889999997654433   357899999999998 9999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC----CCCEEEeec
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----YYNARISDF  666 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~----~~~~kl~Df  666 (813)
                      ....++|||++.+|.|.+.+... .+++.....++.||+.++.|||.   .+|+||||||+|+|+..    ++.+|++||
T Consensus       108 ~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF  183 (382)
T KOG0032|consen  108 PDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDF  183 (382)
T ss_pred             CCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence            99999999999999999999776 48999999999999999999994   69999999999999963    357999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      |++......   ......+||+.|+|||++....++..+||||+||++|.|++|.+||..........       .....
T Consensus       184 Gla~~~~~~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~  253 (382)
T KOG0032|consen  184 GLAKFIKPG---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRG  253 (382)
T ss_pred             CCceEccCC---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcC
Confidence            999988762   22567889999999999999999999999999999999999999998776433221       11111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..      ......-....+.+.++++.++..||.+|+|+.+++++
T Consensus       254 ~~------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  254 DF------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             CC------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            11      11111222457788999999999999999999999997

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.2e-34  Score=300.01  Aligned_cols=243  Identities=23%  Similarity=0.360  Sum_probs=190.1

Q ss_pred             cccceeeeeeEEEEEEeccC---------CcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          525 EEVGRGSFGIVYKGVILTTR---------TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~---------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +.||+|+||.||+|.+..+.         .....|++|.+..........+.+|+.++..++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            46899999999999864221         123468889876544444557888999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC-------EEEeecc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-------ARISDFG  667 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~-------~kl~DfG  667 (813)
                      +|+||+++++|..++... ..+++..+++++.||++||+|||+   .+|+||||||+|||++.++.       ++++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            999999999999988753 568999999999999999999995   59999999999999986654       8999999


Q ss_pred             CccccccCcccceeecccccccccCccccc-CCCCCCccchhhHHHHHHHHH-hCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFR-NSTITAKVDVYSFGVLLLEII-SCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvvl~ell-tG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ++......      ....++..|+|||.+. +..++.++||||||+++|||+ .|+.|+......+...+        ..
T Consensus       158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~--------~~  223 (262)
T cd05077         158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF--------YE  223 (262)
T ss_pred             CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH--------Hh
Confidence            98765322      2234788899999886 456889999999999999998 58887754322111100        00


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ... ..         .......+.+++.+||+.||.+||++.+|++.|+
T Consensus       224 ~~~-~~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         224 GQC-ML---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             cCc-cC---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            000 00         0112457889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.9e-34  Score=300.59  Aligned_cols=254  Identities=28%  Similarity=0.447  Sum_probs=200.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccch--hhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.+.||+|+||+||++...   .++..+|+|.+.........  ....|+.++++++|+||+++++++.+....++||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~---~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNK---KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEET---TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEEC---CCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccc
Confidence            467889999999999999885   35678999999765332222  2345999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..+..++.||++||.+||+.   +|+|+||||+||+++.++.++|+|||.+......  .
T Consensus        78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~--~  152 (260)
T PF00069_consen   78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN--N  152 (260)
T ss_dssp             EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTST--T
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--c
Confidence            9999999999999778889999999999999999999964   9999999999999999999999999999864211  1


Q ss_pred             ceeecccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFR-NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .......++..|+|||++. +...+.++||||+|+++++|++|+.|+.................       ... .....
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~-------~~~-~~~~~  224 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK-------RPL-PSSSQ  224 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH-------THH-HHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc-------ccc-ccccc
Confidence            1234566899999999998 78899999999999999999999999986522111111100000       000 00000


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ........+.+++..||+.||++||++.+++++
T Consensus       225 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  225 --QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             --SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             --ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              000113789999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=4.3e-34  Score=305.57  Aligned_cols=258  Identities=27%  Similarity=0.410  Sum_probs=201.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+++.++||+|+||.||++.....  ......+|+|.++... ....+++.+|+.++++++|+||+++++++.++...+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            4466778999999999999986421  2356789999986532 223456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          596 LVYEFLNNGTLASFLFGN----------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~----------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      +|+||+++++|.+++...                      ..+++..++.++.|++.||+|||+   .+++||||||+||
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~ni  161 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRNC  161 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhhe
Confidence            999999999999998632                      236788889999999999999995   4999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~  732 (813)
                      ++++++.++|+|||+++................+..|+|||.+.+..++.++||||||+++|||++ |..||.....++.
T Consensus       162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~  241 (288)
T cd05050         162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV  241 (288)
T ss_pred             EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            999999999999999876543321111122234667999999988899999999999999999998 8888864332211


Q ss_pred             hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                            . .....+....         .....+..+.+++.+||+.+|.+|||+.|+++.|++
T Consensus       242 ------~-~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         242 ------I-YYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ------H-HHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                  1 1111111110         011235678999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.8e-34  Score=318.89  Aligned_cols=253  Identities=19%  Similarity=0.255  Sum_probs=197.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+++.+.||+|+||.||++...   ..+..+|+|.+....   ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus        43 ~~y~~~~~lG~G~fg~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          43 EDYDVVKVIGRGAFGEVQLVRHK---SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             HHCeEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            45677889999999999999874   356789999986421   122345788999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++... .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus       120 lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence            999999999999998654 57888999999999999999995   59999999999999999999999999999876433


Q ss_pred             cccceeecccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .... .....||+.|+|||++.+..    ++.++|||||||++|||++|+.||.........      ........    
T Consensus       196 ~~~~-~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~------~~i~~~~~----  264 (370)
T cd05621         196 GMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY------SKIMDHKN----  264 (370)
T ss_pred             Ccee-cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH------HHHHhCCc----
Confidence            2211 23456999999999987643    778999999999999999999999754322110      01110000    


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  792 (813)
                         .+..+........+.+++..|++.++.+  |+++.|++++
T Consensus       265 ---~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         265 ---SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ---ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence               0111112233567788889999765543  8999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.4e-34  Score=309.50  Aligned_cols=262  Identities=27%  Similarity=0.408  Sum_probs=202.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc----CCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT----RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      ...+.+.++||+|+||.||++.....    ......+|+|.++... .....++..|++++.++ +|+||+++++++...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            34566789999999999999975321    1245678999887432 22345688899999999 699999999999998


Q ss_pred             CceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL  655 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll  655 (813)
                      ...++|+||+++|+|.+++...                ..+++..+.+++.||+.||.|||+   .+++|+||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence            8999999999999999998643                347889999999999999999995   499999999999999


Q ss_pred             cCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhh
Q 045343          656 DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAI  734 (813)
Q Consensus       656 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~  734 (813)
                      +.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....++.. 
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-  246 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF-  246 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH-
Confidence            9999999999999987643222111112234567999999988889999999999999999999 88888644322211 


Q ss_pred             hHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       735 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                            ..........         .....+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus       247 ------~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         247 ------KLLREGHRMD---------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             ------HHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence                  1111111000         112335678899999999999999999999999988663

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-34  Score=305.53  Aligned_cols=259  Identities=23%  Similarity=0.307  Sum_probs=206.3

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ....+++.++||+|+||+||++...   ..+..+|+|++.... ....+++.+|+++++.++|+||+++++++......+
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHI---PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC   79 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEc---CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence            4456778899999999999999874   356789999876432 233467889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++++|.+++.....+++.....++.+++.+|.|||+  ..+++|+||||+||++++++.++|+|||++......
T Consensus        80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence            999999999999999877788999999999999999999995  247999999999999999999999999998754322


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-----hhhhHHHHHHhhccCcccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-----YAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-----~~~l~~~~~~~~~~~~~~~  750 (813)
                      .    .....++..|+|||.+.+..++.++|||||||++|||++|+.||......+     ...+........       
T Consensus       158 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------  226 (284)
T cd06620         158 I----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-------  226 (284)
T ss_pred             c----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-------
Confidence            1    223468999999999988889999999999999999999999997544321     111111111111       


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        ............+..+.+++.+|++.||.+||++.||+++.
T Consensus       227 --~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         227 --QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             --hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence              11111111112456788999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=8e-34  Score=296.69  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=195.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.||+|+||.||+|...    ++..+|+|.++..... ....+.+|++++++++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK----DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEec----CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCC
Confidence            46999999999999863    5678999988654322 234688999999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          604 GTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       604 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      ++|.+++... ..+++..+..++.|++.+|.|||+   .+++|+||||+||+++.++.+||+|||++.......... ..
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~  152 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-SG  152 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccccc-CC
Confidence            9999998653 457899999999999999999995   499999999999999999999999999997644322111 11


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ...++..|+|||++.+..++.++||||||+++||+++ |..||.........   .    .......         ....
T Consensus       153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~---~----~~~~~~~---------~~~~  216 (250)
T cd05085         153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR---E----QVEKGYR---------MSCP  216 (250)
T ss_pred             CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH---H----HHHcCCC---------CCCC
Confidence            2234568999999998889999999999999999998 99998654322110   0    0111000         0011


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus       217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            123578899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.4e-34  Score=321.64  Aligned_cols=252  Identities=20%  Similarity=0.271  Sum_probs=196.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |.+.++||+|+||.||++...   ..++.+|||.+....   ......+.+|+.++++++|+||+++++.+.+++..++|
T Consensus         3 y~~~~~lG~G~~g~V~~a~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVRKV---DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEEEC---CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence            567789999999999999874   357889999986432   12335578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++.....++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++..+.....
T Consensus        80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~  156 (376)
T cd05598          80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (376)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence            9999999999999888888999999999999999999995   4999999999999999999999999999753321000


Q ss_pred             -----------------------------------------cceeecccccccccCcccccCCCCCCccchhhHHHHHHH
Q 045343          678 -----------------------------------------KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE  716 (813)
Q Consensus       678 -----------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~e  716 (813)
                                                               ........||+.|+|||++.+..++.++|||||||++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  236 (376)
T cd05598         157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  236 (376)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence                                                     000113469999999999999999999999999999999


Q ss_pred             HHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 045343          717 IISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP---TMKKVLQM  792 (813)
Q Consensus       717 lltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~evl~~  792 (813)
                      |++|+.||......+...      .......       .............+.+++.+|+ .+|.+|+   ++.|++++
T Consensus       237 ll~G~~Pf~~~~~~~~~~------~i~~~~~-------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         237 MLVGQPPFLADTPAETQL------KVINWET-------TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             hhhCCCCCCCCCHHHHHH------HHhccCc-------cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            999999997654322111      0000000       0000111123456677777765 5999999   89999877

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=4.9e-34  Score=299.26  Aligned_cols=248  Identities=27%  Similarity=0.360  Sum_probs=201.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|++|.||++...   .++..+++|.+...  .....+++.+|++++++++|+||+++++++.+++..++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRK---ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVM   78 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEc---CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEE
Confidence            456789999999999999874   35678999988642  2334567889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++...  ..+++..++.++.|+++||.|||+   .+++|+||||+||+++.++.++|+|||+++......
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence            999999999999764  567899999999999999999995   599999999999999999999999999988765432


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....++..|+|||++.+..++.++|+||||++++||++|+.||........   .    .....+....      
T Consensus       156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~----~~~~~~~~~~------  220 (256)
T cd08529         156 NF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL---I----LKIIRGVFPP------  220 (256)
T ss_pred             ch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---H----HHHHcCCCCC------
Confidence            21  2334578899999999998899999999999999999999999975442111   0    0011111111      


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ........+.+++.+||+.+|++||++.+++++
T Consensus       221 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         221 ---VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             ---CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence               111345678999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=5.7e-34  Score=301.56  Aligned_cols=261  Identities=25%  Similarity=0.382  Sum_probs=205.4

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ....+.+.++||+|+||.||+|...........|+||...... ....+.+.+|+.++++++|+||+++++++.+ +..+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            4455678899999999999999875443345679999886543 2334578999999999999999999999865 5578


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+++++|.+++... ..+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++....
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence            999999999999999764 457999999999999999999995   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... .....++..|+|||.+....++.++||||||++++||++ |..||......+..   ..   . ....  ..  
T Consensus       160 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~---~-~~~~--~~--  227 (270)
T cd05056         160 ESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI---GR---I-ENGE--RL--  227 (270)
T ss_pred             cccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HH---H-HcCC--cC--
Confidence            32211 122334568999999988889999999999999999996 99999754332211   00   0 0000  00  


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                           ......+..+.+++.+|+..+|.+|||+.++++.|+++..
T Consensus       228 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         228 -----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                 0111335678899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=7.7e-34  Score=302.19  Aligned_cols=250  Identities=23%  Similarity=0.374  Sum_probs=195.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||+|+||.||+|...   ..+..+|+|.+... .....+++.+|++++++++|+||+++++++...+..++|+|
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAYHL---LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             chheeeeccCCCeEEEEEEEc---CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            456789999999999999874   35678999998643 22234568899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|..+.    .+++..+..++.|++.||.|||+   .+|+|+||||+|||++.++.++|+|||++.......   
T Consensus        80 ~~~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---  149 (279)
T cd06619          80 FMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---  149 (279)
T ss_pred             cCCCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---
Confidence            99999997553    46788889999999999999995   499999999999999999999999999998654322   


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....++..|+|||.+.+..++.++||||||+++|||++|+.||.......................     .+.+   
T Consensus       150 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---  220 (279)
T cd06619         150 -AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL---  220 (279)
T ss_pred             -ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC---
Confidence             2335689999999999988899999999999999999999999965332111100000001100000     0000   


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+.+++.+|++.+|.+||+++|++++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            111234678899999999999999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=9.3e-34  Score=298.23  Aligned_cols=252  Identities=29%  Similarity=0.434  Sum_probs=198.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+++.++||+|++|.||++...    ....+++|.+... ....+.+.+|+.++++++|+|++++++++. .+..++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWN----GTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV   78 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEc----CCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence            345777889999999999999874    3346899987643 223456889999999999999999999875 4568899


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++|+||||+||++++++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence            9999999999999754  347899999999999999999995   48999999999999999999999999999876433


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....++..|+|||.+.+...+.++||||||+++|||++ |+.||......+.   ....    ... ..     
T Consensus       156 ~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~----~~~-~~-----  221 (260)
T cd05069         156 EYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV---LEQV----ERG-YR-----  221 (260)
T ss_pred             cccc-cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHH----HcC-CC-----
Confidence            2111 122346678999999988889999999999999999999 8988875432211   1111    000 00     


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                         .......+..+.+++.+||+.+|.+||++++|++.|+.
T Consensus       222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         222 ---MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             ---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence               00111345778999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6.8e-34  Score=301.73  Aligned_cols=242  Identities=24%  Similarity=0.382  Sum_probs=188.7

Q ss_pred             ccceeeeeeEEEEEEecc---------------------CCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceE
Q 045343          526 EVGRGSFGIVYKGVILTT---------------------RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~---------------------~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      .||+|+||.||+|.+..+                     ......|++|.+.........++.+|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            699999999999986421                     12234689998865444344578889999999999999999


Q ss_pred             EeEeecCCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----
Q 045343          585 LGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----  659 (813)
Q Consensus       585 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----  659 (813)
                      +++|.+....++||||+++|+|..++.. ...+++..+..++.||++||+|||+   .+|+||||||+|||++..+    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999865 4678999999999999999999995   5999999999999997543    


Q ss_pred             ---CEEEeeccCccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHH-hCCcCCCcccchhhhh
Q 045343          660 ---NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEII-SCRKSFDIEMGEEYAI  734 (813)
Q Consensus       660 ---~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~ell-tG~~p~~~~~~~~~~~  734 (813)
                         .+|++|||++......      ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......+...
T Consensus       159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  232 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER  232 (274)
T ss_pred             ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence               3899999998654321      12346788999998865 56889999999999999995 6898886543322111


Q ss_pred             hHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       735 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                         .    ....  ...     .    ......+.+++.+||+.+|++||++.+|++.|.
T Consensus       233 ---~----~~~~--~~~-----~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         233 ---F----YEKK--HRL-----P----EPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---H----HHhc--cCC-----C----CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               0    0000  000     0    011246889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=6e-34  Score=298.89  Aligned_cols=247  Identities=26%  Similarity=0.371  Sum_probs=197.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee-cCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD-EGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||++..     .+..+++|.++..  ...+.+.+|+.++++++|+|++++++++. +++..++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-----cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            4567789999999999999976     4667899988643  23457889999999999999999999764 55678999


Q ss_pred             EeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||+++++|.+++....  .+++..++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++.....
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  155 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  155 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence            99999999999987543  47899999999999999999995   49999999999999999999999999998765432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .     ....++..|+|||++.+..++.++||||||+++|||++ |+.||.......   +...    ...+...     
T Consensus       156 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~----~~~~~~~-----  218 (256)
T cd05082         156 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPR----VEKGYKM-----  218 (256)
T ss_pred             C-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HhcCCCC-----
Confidence            2     12234568999999998889999999999999999998 998886432211   1111    1111000     


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                          ......+..+.+++.+|++.+|++|||+.++++.|+.+
T Consensus       219 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         219 ----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence                01113457788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=6.7e-34  Score=305.33  Aligned_cols=250  Identities=26%  Similarity=0.349  Sum_probs=201.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.++||+|++|.||+|...   ..+..+++|.+........+.+.+|+.+++.++|+||+++++.+..+...++|||
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEEC---CCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            4566788999999999999863   3567899999876544445678899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.. ..+++..+..++.|++.||+|||.   .+|+|+||||+||+++.++.+||+|||++......... 
T Consensus        98 ~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-  172 (296)
T cd06654          98 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-  172 (296)
T ss_pred             ccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccccc-
Confidence            9999999999864 357899999999999999999995   49999999999999999999999999998865433221 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....+++.|+|||.+.+...+.++|||||||++|||++|+.||..........      ...... ...     .  .
T Consensus       173 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~------~~~~~~-~~~-----~--~  237 (296)
T cd06654         173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNG-TPE-----L--Q  237 (296)
T ss_pred             -cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH------HHhcCC-CCC-----C--C
Confidence             223458889999999998888999999999999999999999997544321110      000000 000     0  0


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+.+++.+||+.+|++||++.||+++
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            112334678899999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-34  Score=299.03  Aligned_cols=255  Identities=31%  Similarity=0.476  Sum_probs=203.9

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +....+.+.++||+|+||.||++...    +...++||.++.. ....+++.+|+.++++++|+||+++++++......+
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~----~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN----GTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY   77 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc----CCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence            34456778899999999999999864    3467999998753 234567899999999999999999999999889999


Q ss_pred             EEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      +||||+++++|.+++...  ..+++..+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||+++...
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence            999999999999999764  3689999999999999999999954   89999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... ......+..|+|||.+.+..++.++||||||++++||++ |+.||.........   ....   ..  .    
T Consensus       155 ~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~---~~~~---~~--~----  221 (261)
T cd05034         155 DDEYTA-REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL---EQVE---RG--Y----  221 (261)
T ss_pred             chhhhh-hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---cC--C----
Confidence            322111 112234568999999998889999999999999999999 99998644322111   1100   00  0    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                          ........+..+.+++.+|++.+|.+||+++++++.|+.
T Consensus       222 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         222 ----RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence                000111225678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.2e-34  Score=312.07  Aligned_cols=240  Identities=25%  Similarity=0.275  Sum_probs=189.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheee-eeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVV-VIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||+||++...   .++..+|||++....   ....+++..|.. +++.++|+||+++++.+..++..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05604           1 KVIGKGSFGKVLLAKRK---LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDF   77 (325)
T ss_pred             CceeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcC
Confidence            46999999999999864   367889999986532   122334555554 46778999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|..++.....+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--  152 (325)
T cd05604          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--  152 (325)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC--
Confidence            9999999999888889999999999999999999995   59999999999999999999999999998754322111  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||..|+|||++.+..++.++|||||||++|||++|+.||......+.      ...... ..        +..  
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~------~~~~~~-~~--------~~~--  215 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM------YDNILH-KP--------LVL--  215 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH------HHHHHc-CC--------ccC--
Confidence            2345689999999999999999999999999999999999999975432211      011111 10        000  


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKV  789 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  789 (813)
                      .......+.+++.+|++.+|.+||++.+.
T Consensus       216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~  244 (325)
T cd05604         216 RPGASLTAWSILEELLEKDRQRRLGAKED  244 (325)
T ss_pred             CCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence            11234667899999999999999988643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-34  Score=298.67  Aligned_cols=251  Identities=21%  Similarity=0.277  Sum_probs=200.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-----ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-----DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +...+.||+|++|.||++...   ..+..+++|.+.....     ...+.+.+|++++++++|+||+++++++.+++..+
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~---~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDV---DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             ccccceecCCCceEEEEEEEc---CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence            456789999999999999864   3567899998864321     12346888999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +|+||+++++|.+++.....+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++.....
T Consensus        81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~  157 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI  157 (263)
T ss_pred             EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence            999999999999999887788999999999999999999995   49999999999999999999999999999865432


Q ss_pred             cccce-eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~-~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..... .....++..|+|||++.+..++.++||||||+++|||++|+.||.........      .........      
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~------  225 (263)
T cd06625         158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI------FKIATQPTN------  225 (263)
T ss_pred             ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH------HHHhccCCC------
Confidence            21110 12345788999999999988999999999999999999999998644322110      011010000      


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ..........+.+++.+||+.+|.+|||+.+++++
T Consensus       226 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         226 ---PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ---CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence               01112345678899999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=5.5e-34  Score=307.15  Aligned_cols=259  Identities=27%  Similarity=0.442  Sum_probs=199.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCc-ceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTS-TTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~-~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ++..+.||+|+||.||+|....+... ...+|+|.+..... ....++.+|+.++++++|+||+++++++... ...+++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~   87 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT   87 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence            34567899999999999987543221 23578888764322 2233688899999999999999999998754 467999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++... ..+++..++.++.|++.||.|||+   .+|+|+||||+||++++++.+||+|||+++.......
T Consensus        88 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~  164 (303)
T cd05110          88 QLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK  164 (303)
T ss_pred             hhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCccc
Confidence            999999999998764 367899999999999999999995   4999999999999999999999999999987654332


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ........++..|+|||.+.+..++.++||||||+++|||++ |+.||.........   ..    .....  ...    
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~---~~----~~~~~--~~~----  231 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP---DL----LEKGE--RLP----  231 (303)
T ss_pred             ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HH----HHCCC--CCC----
Confidence            211222345678999999998889999999999999999998 88988654322211   11    11110  000    


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                         ....+...+.+++..||..+|++||++.++++.|+.+.+-
T Consensus       232 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         232 ---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence               0112345788999999999999999999999999876544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=6.2e-34  Score=307.66  Aligned_cols=264  Identities=21%  Similarity=0.295  Sum_probs=196.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +|.+.++||+|+||.||+|...   ..+..||||.++.... .....+.+|+.++++++|+||+++++++..++..++||
T Consensus         7 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           7 TYIKLEKLGEGTYATVFKGRSK---LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             ceEEEEEecccCCEEEEEEEec---CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            4667789999999999999874   3567899999875432 22345778999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++ +|.+++... ..+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.+||+|||+++.......
T Consensus        84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            99985 777777544 457889999999999999999995   4999999999999999999999999999976543221


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH--------HhhccC-c
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF--------DCYRNE-K  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~~~~~-~  747 (813)
                      .  .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........        ...... .
T Consensus       160 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07872         160 T--YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE  237 (309)
T ss_pred             c--cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence            1  223457889999998865 467899999999999999999999997654322211110000        000000 0


Q ss_pred             ccccccccccc----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEA----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....-.+....    .........+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            00000000000    0011234677899999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.1e-33  Score=300.67  Aligned_cols=244  Identities=25%  Similarity=0.348  Sum_probs=191.2

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||.||++...   ..+..+|+|++....   ....+.+..|++++++++|+||+++++.+.++...++||||+++
T Consensus         1 lg~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g   77 (277)
T cd05607           1 LGKGGFGEVCAVQVK---NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNG   77 (277)
T ss_pred             CCCCCceEEEEEEEc---cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCC
Confidence            799999999999874   357889999986421   11233456799999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          604 GTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       604 gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|.+++...  ..+++..+..++.||+.||+|||+   .+|+||||||+||+++.++.++|+|||++........   .
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~---~  151 (277)
T cd05607          78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---I  151 (277)
T ss_pred             CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---e
Confidence            9999888543  357889999999999999999995   5999999999999999999999999999987653321   2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....|+..|+|||++.+..++.++|||||||++|||++|+.||.........  ......... .        .... ..
T Consensus       152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~-~--------~~~~-~~  219 (277)
T cd05607         152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EELKRRTLE-D--------EVKF-EH  219 (277)
T ss_pred             eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHHHHHhhc-c--------cccc-cc
Confidence            3356899999999999888999999999999999999999999753321110  011111110 0        0000 01


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ......+.+++..||+.||++||++.|+++
T Consensus       220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         220 QNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             ccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            123567899999999999999999966553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=7.2e-34  Score=299.06  Aligned_cols=254  Identities=27%  Similarity=0.436  Sum_probs=201.5

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +..+.+.+.++||+|+||.||++...    ....+++|.++.. ....+.+.+|+.++++++|+||+++.+++.+ ...+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~----~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~   76 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY   76 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec----CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence            44566788899999999999999764    3456999987643 2234578899999999999999999999887 7789


Q ss_pred             EEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ++|||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIE  153 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeecc
Confidence            999999999999999753  457888999999999999999995   499999999999999999999999999997654


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... .....++..|+|||.+....++.++|+||||+++|++++ |+.||.......   +....    ....     
T Consensus       154 ~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~----~~~~-----  220 (260)
T cd05073         154 DNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRAL----ERGY-----  220 (260)
T ss_pred             CCCccc-ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----hCCC-----
Confidence            322111 222345678999999988889999999999999999999 898986543211   11111    1100     


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                          ........+..+.+++.+|++.+|++||++.++++.|+.
T Consensus       221 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         221 ----RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             ----CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                000111335678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.3e-34  Score=312.02  Aligned_cols=241  Identities=26%  Similarity=0.302  Sum_probs=189.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhhee-eeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEV-VVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||++...   .++..+|+|.+....   .....++..|. .+++.++|+||+++++++.+.+..++||||
T Consensus         1 ~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05602           1 KVIGKGSFGKVLLARHK---AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDY   77 (325)
T ss_pred             CeeeeCCCeEEEEEEEC---CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeC
Confidence            46999999999999874   356789999986432   11223344443 356778999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|.+++.....+.+.....++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~--  152 (325)
T cd05602          78 INGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT--  152 (325)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC--
Confidence            9999999999888888888999999999999999995   59999999999999999999999999999754322211  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .   ... ..        ...  .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~---~i~-~~--------~~~--~  215 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY---D---NIL-NK--------PLQ--L  215 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHH---H---HHH-hC--------CcC--C
Confidence            33456999999999999999999999999999999999999999754322110   0   000 00        000  0


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                      .......+.+++.+||+.+|.+||++.+.+
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         216 KPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            112356788999999999999999887443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=4.6e-34  Score=310.42  Aligned_cols=241  Identities=25%  Similarity=0.306  Sum_probs=192.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccc-cCCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l  596 (813)
                      +++.+.||+|+||.||++...   .++..||||+++...   ....+.+..|..++..+. |++|+++.+++.+.+..++
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERK---GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF   78 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence            467789999999999999874   357789999987532   223345677888888775 5778889999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~  155 (323)
T cd05615          79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG  155 (323)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence            99999999999999888889999999999999999999995   499999999999999999999999999987543222


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   .....    ..        ..
T Consensus       156 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~---~~~i~----~~--------~~  218 (323)
T cd05615         156 VT--TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL---FQSIM----EH--------NV  218 (323)
T ss_pred             cc--ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHH----hC--------CC
Confidence            11  2345689999999999998899999999999999999999999975433211   11110    00        00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                      .  ........+.+++.+||+.+|.+|++.
T Consensus       219 ~--~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         219 S--YPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             C--CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            0  011234677899999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-34  Score=312.74  Aligned_cols=252  Identities=25%  Similarity=0.363  Sum_probs=210.7

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      .+.|+||+|.||.|++|.+....++...||||.++..... ...+|.+|+.+|.+|+|+|+++|+|+..+ ....||+|.
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            3458999999999999999887777788999999865443 56789999999999999999999999887 788999999


Q ss_pred             cCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          601 LNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       601 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ++.|||.+.|+..  ..+.......++.|||.||.||.   ++++|||||..+|+||-....+||+|||+.+-+..++..
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            9999999999863  45678888899999999999999   569999999999999999999999999999988766554


Q ss_pred             ceeec-ccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          679 AIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       679 ~~~~~-~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..+.. ..-...|.|||.+...+++.++|||+|||.+|||+| |..|+-+..+...                -+.+|...
T Consensus       269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI----------------L~~iD~~e  332 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI----------------LKNIDAGE  332 (1039)
T ss_pred             eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH----------------HHhccccc
Confidence            43333 335678999999999999999999999999999999 7788765443211                11223233


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      +......+++.++++++.||..+|.+|||+..|.+.+
T Consensus       333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            3334556899999999999999999999999997443

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.1e-33  Score=298.71  Aligned_cols=254  Identities=21%  Similarity=0.317  Sum_probs=201.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.++||+|+||.||+|...   ..+..+|+|.++.........+.+|+.+++.++|+||+++++.+..++..++|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNV---NTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEc---CCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            35677789999999999999874   356789999987544444456788999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..++.++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++.........
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence            9999999999998888899999999999999999999954   9999999999999999999999999998765432211


Q ss_pred             ceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                        .....|+..|+|||++.   ...++.++|||||||++|||++|+.|+..........  .    . ....   ...+.
T Consensus       163 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~--~----~-~~~~---~~~~~  230 (267)
T cd06645         163 --RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L----M-TKSN---FQPPK  230 (267)
T ss_pred             --cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH--h----h-hccC---CCCCc
Confidence              23456899999999874   4457889999999999999999999986433211110  0    0 0000   00000


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  ........+.+++.+||+.+|++||++++|+++
T Consensus       231 ~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         231 LK--DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cc--ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            00  011234568899999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.3e-34  Score=301.51  Aligned_cols=261  Identities=28%  Similarity=0.427  Sum_probs=205.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCC-cceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRT-STTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...+++.+.||+|+||.||+|....+.. ....+|+|.+..... ....++.+|+.++++++|+||+++++++.. ...+
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            3556778999999999999998754322 234689998865432 234578899999999999999999999987 7889


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+++|+|.+++... ..+++..++.++.||+.||+|||+   .+++|+||||+||++++++.+||+|||+++....
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            999999999999999764 468999999999999999999995   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...........++..|+|||.+....++.++|+||||++++|+++ |+.||.....++..   ..    .....  ..  
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~----~~~~~--~~--  230 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIP---DL----LEKGE--RL--  230 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH---HH----HhCCC--CC--
Confidence            332221122224568999999988889999999999999999999 99998754332211   11    11100  00  


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                           .....+...+.+++..||..+|.+||++.++++.|+.+..
T Consensus       231 -----~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         231 -----PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                 0111234568899999999999999999999999988644

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.8e-33  Score=299.89  Aligned_cols=251  Identities=24%  Similarity=0.317  Sum_probs=199.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +++.++||+|+||.||+|...   ..+..+++|.+........+.+.+|+++++.++|+||+++++++..++..++|+||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNK---ETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEEC---CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            566788999999999999874   35678899998655444556788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++++|..++.. ...+++..+..++.|+++||.|||+   .+++|+||||+||+++.++.+||+|||++......... 
T Consensus        84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-  159 (282)
T cd06643          84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-  159 (282)
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccccc-
Confidence            999999998765 4568999999999999999999995   49999999999999999999999999998765432211 


Q ss_pred             eeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                       .....++..|+|||++.     +..++.++|||||||++|||++|+.||......+.  .    ...... ....+.  
T Consensus       160 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~----~~~~~~-~~~~~~--  229 (282)
T cd06643         160 -RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV--L----LKIAKS-EPPTLA--  229 (282)
T ss_pred             -cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH--H----HHHhhc-CCCCCC--
Confidence             23346889999999984     34577899999999999999999999875432111  0    011000 000000  


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                           ........+.+++.+||+.+|.+||++.+++++-
T Consensus       230 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         230 -----QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             -----CccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence                 1112356788999999999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.1e-33  Score=298.96  Aligned_cols=252  Identities=27%  Similarity=0.450  Sum_probs=197.3

Q ss_pred             cccceeeeeeEEEEEEeccC---CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTR---TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|......   .....++||.+.... .....++.+|+.++++++|+||+++++++...+..++|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36899999999999875321   233678999876432 23456788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-----CEEEeeccC
Q 045343          601 LNNGTLASFLFGN-------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-----NARISDFGL  668 (813)
Q Consensus       601 ~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-----~~kl~DfGl  668 (813)
                      +++++|.+++...       ..+++..++.++.|++.||.|||+   .+++|+||||+||+++.+.     .++|+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999642       346889999999999999999995   5899999999999999877     899999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.   ...    .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~~~----~~~~~  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---LQH----VTAGG  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---HHH----HhcCC
Confidence            986643322211223345678999999998899999999999999999998 9999864432211   110    00000


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                               ........+..+.+++.+||+.+|.+||++++|++.|++
T Consensus       231 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         231 ---------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ---------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence                     001112345778899999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.5e-33  Score=295.85  Aligned_cols=257  Identities=23%  Similarity=0.368  Sum_probs=204.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||+|...   .++..+++|.++...   ....+.+.+|++++++++|+||+++++++.+++..++
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICL---LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEc---CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            3567889999999999999885   356789999886321   2224578899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ||||+++++|.+++..    ...+++..+..++.++++||.|||+   .+|+|+||+|+||+++.++.++|+|||+++..
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence            9999999999998853    3457899999999999999999995   49999999999999999999999999998865


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....++..|+|||.+.+..++.++||||||+++|+|++|+.||........    .. ......+....  
T Consensus       157 ~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~-~~~~~~~~~~~--  227 (267)
T cd08224         157 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY----SL-CKKIEKCDYPP--  227 (267)
T ss_pred             cCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH----HH-HhhhhcCCCCC--
Confidence            433211  2234578899999999888899999999999999999999999864332110    00 01111111110  


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                            .........+.+++.+||+.+|.+||++.+|+++|+.+.
T Consensus       228 ------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         228 ------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence                  111134567889999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.5e-33  Score=298.17  Aligned_cols=254  Identities=29%  Similarity=0.415  Sum_probs=189.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||+|..... .....+++|.+.... .....++.+|+.+++.++|+||+++++.+.+....++||||+++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRG-MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             CcCCccCCceEEEEEEecC-CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            4699999999999976433 345678999876432 22235678899999999999999999999999999999999999


Q ss_pred             CchhhhhhccC-----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          604 GTLASFLFGNL-----KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       604 gsL~~~l~~~~-----~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+|.+++....     ..++...+.++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+++........
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  156 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY  156 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence            99999996542     24677888999999999999995   49999999999999999999999999998754332211


Q ss_pred             ceeecccccccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRN-------STITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~-------~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .......++..|+|||++..       ..++.++||||||+++|||++ |..||......+.  +.    .... +....
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~----~~~~-~~~~~  229 (269)
T cd05042         157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LK----QVVR-EQDIK  229 (269)
T ss_pred             eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HH----HHhh-ccCcc
Confidence            11122345678999998743       356789999999999999999 7778764432211  10    1111 11111


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      +..+...    ......+.+++..|+ .||++||+++||++.|.
T Consensus       230 ~~~~~~~----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         230 LPKPQLD----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCCCccc----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            1122111    123466677888888 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=5.9e-34  Score=309.49  Aligned_cols=238  Identities=24%  Similarity=0.273  Sum_probs=188.2

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheee-eeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVV-VIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   .++..+|+|.+.....   ....++..|.. +++.++|+||+++++++.+.+..++||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   77 (321)
T cd05603           1 KVIGKGSFGKVLLAKRK---SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDY   77 (321)
T ss_pred             CeeeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcC
Confidence            46999999999999874   3567899999864321   12234445544 57788999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|..++.....+++..+..++.||++||.|||+   .+|+||||||+||+++.++.+||+|||+++.......  .
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~  152 (321)
T cd05603          78 VNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--T  152 (321)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--c
Confidence            9999999999887888899999999999999999995   5999999999999999999999999999875422211  1


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   +..   ... ..        ...  .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~---~i~-~~--------~~~--~  215 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYD---NIL-HK--------PLQ--L  215 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHH---HHh-cC--------CCC--C
Confidence            234568999999999998889999999999999999999999997543211   100   111 11        010  1


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMK  787 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~  787 (813)
                      .......+.+++.+||+.+|.+||+..
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         216 PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            112346788999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.3e-33  Score=312.28  Aligned_cols=256  Identities=18%  Similarity=0.239  Sum_probs=198.0

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ....+++.+.||+|+||.||++...   ..++.+|+|.+....   ....+.+.+|+.+++.++||||+++++.+.++..
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            3456778899999999999999874   356789999986421   1223457789999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++||||+++|+|.+++... .++...+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence            99999999999999998654 47888889999999999999995   599999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ...... .....||+.|+|||++....    ++.++|||||||++|||++|+.||........      .......... 
T Consensus       194 ~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------~~~i~~~~~~-  265 (371)
T cd05622         194 KEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMNHKNS-  265 (371)
T ss_pred             cCCccc-ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH------HHHHHcCCCc-
Confidence            332211 23456999999999987543    78899999999999999999999975433211      0111111000 


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQML  793 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~L  793 (813)
                            ............+.+++..||+.++.+  ||++.|++++.
T Consensus       266 ------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         266 ------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             ------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence                  001111234567888999999854443  78999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-33  Score=294.99  Aligned_cols=248  Identities=26%  Similarity=0.412  Sum_probs=196.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||++...    .++.|++|.++..... ..+++.+|++++++++|+||+++++++.+....++|+||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~----~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK----GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEe----CCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence            47999999999999874    3678999988754332 345789999999999999999999999999999999999999


Q ss_pred             Cchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          604 GTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       604 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      ++|.+++.. ...+++..+..++.+++.+|.|||+.   +++||||||+||+++.++.+||+|||++.............
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG  153 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence            999999865 35678999999999999999999954   99999999999999999999999999998654221111111


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ....+..|+|||.+.+..++.++|+||||+++|||++ |..||..........       .....  ...       ...
T Consensus       154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~-------~~~~~--~~~-------~~~  217 (251)
T cd05041         154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE-------RIESG--YRM-------PAP  217 (251)
T ss_pred             cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH-------HHhcC--CCC-------CCC
Confidence            2234567999999988889999999999999999999 888886443221111       00000  000       011


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      ...+..+.+++.+|++.+|.+||++.||++.|+.
T Consensus       218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            1235678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.2e-33  Score=299.59  Aligned_cols=256  Identities=23%  Similarity=0.418  Sum_probs=199.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC------c
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ------N  593 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~  593 (813)
                      .+.+.||+|+||.||+|.+......+..+|||.++...  ....+++.+|++++++++|+||+++++++...+      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            45678999999999999987665667899999886432  223456889999999999999999999886533      2


Q ss_pred             eEEEEeecCCCchhhhhhcc------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          594 RLLVYEFLNNGTLASFLFGN------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .++++||+.+|+|.+++...      ..+++...++++.||+.||+|||+   .+|+|+||||+||+++.++.+||+|||
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECccc
Confidence            47889999999999887432      246888999999999999999995   499999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      +++...............++..|++||.+....++.++||||||+++|||++ |+.||......+   +.....   ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~~~---~~~  232 (273)
T cd05074         159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNYLI---KGN  232 (273)
T ss_pred             ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHHHH---cCC
Confidence            9987654322211223345678999999988889999999999999999999 888886443211   111110   111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ...          ........+.+++.+|++.+|++||++.|+++.|+++
T Consensus       233 ~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         233 RLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            000          0112356899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5e-34  Score=299.93  Aligned_cols=243  Identities=24%  Similarity=0.404  Sum_probs=190.1

Q ss_pred             cccceeeeeeEEEEEEeccCC----cceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRT----STTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|.......    ....+++|.+........+++.+|+.+++.++|+||+++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            479999999999998753221    2345888887654444456788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC--------EEEeeccCccc
Q 045343          601 LNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN--------ARISDFGLAKL  671 (813)
Q Consensus       601 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~--------~kl~DfGla~~  671 (813)
                      +++|+|.+++... ..+++..++.++.||+.||+|||+   .+|+||||||+||+++.++.        ++++|||++..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            9999999999764 457999999999999999999995   59999999999999987765        69999999875


Q ss_pred             cccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCC-cCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCR-KSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ....      ....++..|+|||++.+. .++.++||||||+++|||++|. .|+..........       ....  ..
T Consensus       158 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-------~~~~--~~  222 (258)
T cd05078         158 VLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-------FYED--RH  222 (258)
T ss_pred             cCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-------HHHc--cc
Confidence            5432      224578899999999864 5788999999999999999985 5554322211110       0000  00


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .     +    .......+.+++.+||+.+|++|||++++++.|+
T Consensus       223 ~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         223 Q-----L----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             c-----C----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0     0    1112356889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2e-33  Score=297.70  Aligned_cols=249  Identities=27%  Similarity=0.385  Sum_probs=194.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecC------C
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG------Q  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~------~  592 (813)
                      .+++.+.||+|+||.||+|...   ..++.+|+|.+... .....++..|+.++.++ +|+||+++++++...      .
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHV---KTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEc---CCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            4566788999999999999874   35678999998653 23445788899999998 699999999998653      3


Q ss_pred             ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ..++||||+++++|.+++...  ..+++..+..++.|++.||+|||+   .+|+|+||||+||++++++.+||+|||+++
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            578999999999999998763  467899999999999999999995   499999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ........  .....|+..|+|||++.     ...++.++|||||||++|||++|+.||..........      .. ..
T Consensus       160 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~------~~-~~  230 (272)
T cd06637         160 QLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF------LI-PR  230 (272)
T ss_pred             eccccccc--CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH------HH-hc
Confidence            65432211  23456889999999986     3357889999999999999999999996433211110      00 00


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ......        ........+.+++.+||+.+|.+|||+.|++++
T Consensus       231 ~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         231 NPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCCCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            101111        111234678899999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.4e-33  Score=330.33  Aligned_cols=258  Identities=24%  Similarity=0.356  Sum_probs=200.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |++.++||+|+||.||+|...   ..++.||||+++....   ...+++.+|++++++++||||+++++++.+++..++|
T Consensus         4 YeIi~~LGkGgfG~VYlA~d~---~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          4 YDIIRLIGKGGMGEVYLAYDP---VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             eEEEEEEecCCCEEEEEEEEC---CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            567789999999999999874   3567899999864322   2235688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeec
Q 045343          598 YEFLNNGTLASFLFGN-----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF  666 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df  666 (813)
                      |||+++++|.+++...           ...++..+++++.||++||+|||+   .+|+||||||+|||++.++.+||+||
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDF  157 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDW  157 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEec
Confidence            9999999999988531           234577788999999999999995   49999999999999999999999999


Q ss_pred             cCccccccCcc----------------cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          667 GLAKLLTLNQS----------------KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       667 Gla~~~~~~~~----------------~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                      |+++.......                ........||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus       158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~  237 (932)
T PRK13184        158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR  237 (932)
T ss_pred             CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence            99987621110                00012346999999999999999999999999999999999999999753322


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcCcC
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGVVE  798 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~  798 (813)
                      ....      .    .   .+.++. ......+.+..+.+++.+|++.||++|| +++++++.|+..+.
T Consensus       238 ki~~------~----~---~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        238 KISY------R----D---VILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hhhh------h----h---hccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            1100      0    0   000000 0001113456788999999999999995 67778788876554

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-33  Score=299.91  Aligned_cols=256  Identities=26%  Similarity=0.377  Sum_probs=201.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+...+.||+|+||+||+|......  .....+++|.+...... ..+++.+|++++++++|+||+++++++.+.+..++
T Consensus         6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   85 (275)
T cd05046           6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM   85 (275)
T ss_pred             hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence            3456678999999999999875432  24567999988654332 34578999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccC---------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          597 VYEFLNNGTLASFLFGNL---------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~---------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      |+||+++++|.+++....         .+++..+..++.|++.||+|||+   .+|+|+||||+||+++.++.++|+|||
T Consensus        86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~  162 (275)
T cd05046          86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLS  162 (275)
T ss_pred             EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccc
Confidence            999999999999997654         68999999999999999999995   499999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      +++......... .....++..|+|||.+.+...+.++||||||+++++|++ |..||.........       ......
T Consensus       163 ~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~-------~~~~~~  234 (275)
T cd05046         163 LSKDVYNSEYYK-LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVL-------NRLQAG  234 (275)
T ss_pred             cccccCcccccc-cCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHH-------HHHHcC
Confidence            987543222111 223345778999999988888999999999999999999 78888543221110       111111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ....        ......+..+.+++.+||+.+|.+||++.|++++|.
T Consensus       235 ~~~~--------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLEL--------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1110        011134568899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.1e-33  Score=319.38  Aligned_cols=256  Identities=23%  Similarity=0.350  Sum_probs=188.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC--------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------  591 (813)
                      .|.+.+.||+|+||.||+|...   ..+..||||++...    .....+|+.++++++|+||+++++++...        
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~---~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICI---DTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEEC---CCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3667889999999999999874   35678999988542    22345799999999999999999976332        


Q ss_pred             CceEEEEeecCCCchhhhhh----ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeec
Q 045343          592 QNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDF  666 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Df  666 (813)
                      ...++||||+++ +|.+++.    ....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence            135689999985 5666553    34678899999999999999999995   5999999999999999654 7999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      |+++.+.....   .....||+.|+|||++.+. .++.++|||||||++|||++|.+||......+...  . .......
T Consensus       216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~--~-i~~~~~~  289 (440)
T PTZ00036        216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV--R-IIQVLGT  289 (440)
T ss_pred             ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH--H-HHHHhCC
Confidence            99987654322   2235689999999998654 68999999999999999999999997654322111  0 0111000


Q ss_pred             C---------------cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 E---------------KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~---------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .               ....+....+........+..+.+|+.+||+.||.+|||+.|++++
T Consensus       290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            0               0000000111111111234678999999999999999999999955

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=8.6e-34  Score=309.40  Aligned_cols=253  Identities=19%  Similarity=0.221  Sum_probs=195.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.+.||+|+||+||++...   ..++.+|||.+....   ......+.+|+.++..++|+||+++++++.+++..++|
T Consensus         3 y~i~~~lG~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           3 FEIIKVIGRGAFGEVAVVKMK---HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             ceEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            567789999999999999874   356789999986421   12234578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++.. ...+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence            999999999999976 4678899999999999999999995   599999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ... .....|++.|+|||++.+     ..++.++||||||+++|||++|+.||......+..      ........... 
T Consensus       157 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~------~~i~~~~~~~~-  228 (331)
T cd05624         157 TVQ-SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY------GKIMNHEERFQ-  228 (331)
T ss_pred             cee-eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHH------HHHHcCCCccc-
Confidence            211 233569999999999875     45788999999999999999999999754322110      01111100000 


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  792 (813)
                      ....     ....++.+.+++.+|+..++.+  |+++++++++
T Consensus       229 ~p~~-----~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         229 FPSH-----ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             CCCc-----cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            0000     0123567888898888765544  5688888876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.5e-33  Score=299.70  Aligned_cols=249  Identities=27%  Similarity=0.378  Sum_probs=200.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+...+.||+|+||.||+|...   ..+..||+|.++... ....+.+.+|++++++++|+||+++++++..+...++|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDN---RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII   80 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEc---CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence            44566688999999999999874   356789999886432 23345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+++++|.+++.. ..+++..+..++.|+++|+.|||+   .+++|+||+|+||++++++.++|+|||++..+.....
T Consensus        81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence            999999999998864 467899999999999999999995   5999999999999999999999999999987653321


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .  .....++..|+|||.+.+..++.++||||||++++||++|+.|+.........       .......     .+   
T Consensus       157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~-----~~---  219 (277)
T cd06642         157 K--RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL-------FLIPKNS-----PP---  219 (277)
T ss_pred             h--hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH-------hhhhcCC-----CC---
Confidence            1  22345788999999999888999999999999999999999998643221110       0000000     01   


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......+..+.+++.+||+.+|.+||++.+|+++
T Consensus       220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         220 -TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence             1112345678899999999999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.1e-33  Score=301.48  Aligned_cols=249  Identities=25%  Similarity=0.362  Sum_probs=201.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.+.++||.|++|.||+|...   .++..|+||.+........+.+.+|+.+++.++|+||+++++++..++..++|+||
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDV---ATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEc---CCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            556688999999999999763   36778999998765445556788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|.+++... .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.........  
T Consensus        98 ~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--  171 (296)
T cd06655          98 LAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--  171 (296)
T ss_pred             cCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccccccc--
Confidence            9999999988654 58999999999999999999995   49999999999999999999999999998865543221  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...........   ..    ......+.       .
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~---~~----~~~~~~~~-------~  237 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IA----TNGTPELQ-------N  237 (296)
T ss_pred             CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HH----hcCCcccC-------C
Confidence            2234588899999999988899999999999999999999999976543221110   00    00000000       1


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......+.+++.+||+.+|.+||++.+|+++
T Consensus       238 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            11234678899999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=5.1e-33  Score=294.05  Aligned_cols=254  Identities=24%  Similarity=0.369  Sum_probs=188.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||+|....+ .....+++|.++... ....+.+.+|+.+++.++||||+++++.|.+....++||||+++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTD-TGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             CcCCCCcCceEEEEEEEcC-CCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence            3699999999999976433 234567777765432 23346789999999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          604 GTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       604 gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+|.+++...    ...++..+..++.||++||+|||+   .+++|+||||+|||++.++.+||+|||++..........
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~  156 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE  156 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence            9999999753    345667788999999999999995   499999999999999999999999999986432221111


Q ss_pred             eeecccccccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRN-------STITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~-------~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ......++..|+|||++..       ..++.++||||||+++|||++ |..||......+  .+    ..... +....+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~----~~~~~-~~~~~~  229 (268)
T cd05086         157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE--VL----NHVIK-DQQVKL  229 (268)
T ss_pred             cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH--HH----HHHHh-hccccc
Confidence            1233457889999998753       245779999999999999997 566775432211  11    11111 111222


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .++.+..    ...+.+.+++..|| .+|++||++++|++.|.
T Consensus       230 ~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         230 FKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            2332221    23466778888999 57999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.9e-33  Score=294.98  Aligned_cols=250  Identities=27%  Similarity=0.469  Sum_probs=199.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.+.||+|+||.||++...    .+..+++|.++.. .....++.+|++++++++|+|++++++++......++|+|
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~----~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWL----EKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEe----CCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            4567789999999999999874    3457999988643 2234578999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..++.++.|++.+|+|||+.   +++|+||||+||+++.++.+||+|||+++........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence            99999999998764 4678999999999999999999954   8999999999999999999999999998765432211


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      . .....++.+|+|||.+.+..++.++||||||+++|||++ |+.||........   .    ......  .....+.  
T Consensus       157 ~-~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~----~~~~~~--~~~~~~~--  224 (256)
T cd05112         157 S-STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV---V----ETINAG--FRLYKPR--  224 (256)
T ss_pred             c-cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH---H----HHHhCC--CCCCCCC--
Confidence            1 112235678999999998889999999999999999998 9999864432211   0    111110  0111111  


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                           ...+.+.+++.+||+.+|++||++.|++++|.
T Consensus       225 -----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         225 -----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             -----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                 12467899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-33  Score=293.97  Aligned_cols=253  Identities=25%  Similarity=0.339  Sum_probs=203.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+++.+.||.|+||.||+|....   .+..+++|.+........+.+.+|+.++++++|+||+++++++..+...+++||
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDIA---TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEecC---CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            45677899999999999998743   456799999876555556788999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++.........
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence            99999999998776 788999999999999999999995   49999999999999999999999999999876543211


Q ss_pred             ceeecccccccccCcccccCC---CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS---TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                        .....++..|+|||.+.+.   .++.++||||||+++|||++|+.|+...........       .......   ...
T Consensus       158 --~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-------~~~~~~~---~~~  225 (262)
T cd06613         158 --RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-------ISKSNFP---PPK  225 (262)
T ss_pred             --cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------HHhccCC---Ccc
Confidence              2334678899999999776   788999999999999999999999975432211110       0000000   000


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.  .....+..+.+++.+||+.+|.+|||+.+|+.+
T Consensus       226 ~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         226 LK--DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             cc--chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00  122346778999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.8e-33  Score=315.00  Aligned_cols=260  Identities=21%  Similarity=0.207  Sum_probs=193.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.+.||+|+||.||++....   .++.||||...      ...+.+|++++++++|+|||++++++..+...++|||
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~---~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPD---YPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECC---CCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            45667899999999999998753   46789999642      2346789999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ++. ++|.+++... ..+++..++.++.||++||.|||+   .+|+||||||+||||+.++.+||+|||+++........
T Consensus       241 ~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        241 KYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             ccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            985 6888887654 568999999999999999999995   49999999999999999999999999999876543322


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCccc-chh----hhhhHHHHHHhh-ccCcccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEM-GEE----YAILTDWAFDCY-RNEKLDDLV  752 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~-~~~----~~~l~~~~~~~~-~~~~~~~~~  752 (813)
                      .......||..|+|||++.+..++.++|||||||+||||++|..++.... ...    ...+...+.... .........
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~  396 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA  396 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence            22334569999999999999999999999999999999999886653221 111    011111111100 000000000


Q ss_pred             c----------------cccc---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 E----------------GDME---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~----------------~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .                +...   ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0                0000   00001123467899999999999999999999976

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.7e-33  Score=299.29  Aligned_cols=259  Identities=25%  Similarity=0.308  Sum_probs=191.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeecc---ccCCcceEEeEeec-----
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQT---HHKNLVRLLGFCDE-----  590 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~g~~~~-----  590 (813)
                      |++.++||+|+||+||+|...   .+++.||+|.++.....  ....+.+|+.+++++   +|+||+++++++..     
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDP---HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEEC---CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence            567789999999999999874   35778999988653221  223456677766665   69999999998854     


Q ss_pred             CCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      ....++|+||+++ +|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||+
T Consensus        79 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863          79 ETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             CceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCc
Confidence            2357999999985 888888653  357899999999999999999995   4999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc---c
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR---N  745 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~  745 (813)
                      ++.......   .....++..|+|||++.+..++.++|||||||++|||++|++||.........  .. ......   .
T Consensus       155 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~--~~-~~~~~~~~~~  228 (288)
T cd07863         155 ARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL--GK-IFDLIGLPPE  228 (288)
T ss_pred             cccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHH--HH-HHHHhCCCCh
Confidence            987653321   23346789999999999888999999999999999999999999754332111  01 111000   0


Q ss_pred             Ccccc-------ccccccc---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDD-------LVEGDME---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~-------~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....       ...+...   .....+..+.+.+++.+||+.||++|||+.|++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00000       0000000   00111345678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.7e-33  Score=307.19  Aligned_cols=253  Identities=20%  Similarity=0.224  Sum_probs=194.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.++||+|+||+||++...   ..++.+|+|.+.+..   ......+.+|+.++..++|+||+++++.+.+.+..++|
T Consensus         3 y~~~~~lG~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           3 FEILKVIGRGAFGEVAVVKLK---NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             ceEEEEEEeCCCeEEEEEEEC---CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence            567789999999999999874   356789999986421   12233478899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence            999999999999976 4678999999999999999999995   599999999999999999999999999997654332


Q ss_pred             ccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ... .....||+.|+|||++.     ...++.++|||||||++|||++|+.||......+..      ...........+
T Consensus       157 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~------~~i~~~~~~~~~  229 (332)
T cd05623         157 TVQ-SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY------GKIMNHKERFQF  229 (332)
T ss_pred             cce-ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHH------HHHhCCCccccC
Confidence            211 23356999999999986     345788999999999999999999999754322111      111111000000


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccC--CCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQED--PSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~d--P~~RPt~~evl~~  792 (813)
                       ..     ........+.+++.+|+..+  +..|+++.|++++
T Consensus       230 -p~-----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         230 -PA-----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             -CC-----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence             00     01123567778888877554  4447899999887

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.5e-33  Score=304.02  Aligned_cols=197  Identities=23%  Similarity=0.397  Sum_probs=159.0

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec--CCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~lV~e~~  601 (813)
                      .++||+|+||+||+|..... ..++.+|+|.++..  .....+.+|+.++++++|+||+++++++..  +...++|+||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~-~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDG-KDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccC-CCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence            46899999999999986432 35678999998643  223467889999999999999999998854  44678999998


Q ss_pred             CCCchhhhhhcc---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE----cCCCCEEEeeccC
Q 045343          602 NNGTLASFLFGN---------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGL  668 (813)
Q Consensus       602 ~~gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGl  668 (813)
                      .+ +|.+++...         ..+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            65 777776421         247888999999999999999995   499999999999999    4567899999999


Q ss_pred             ccccccCccc-ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcc
Q 045343          669 AKLLTLNQSK-AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIE  727 (813)
Q Consensus       669 a~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~  727 (813)
                      ++........ .......+|+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            9876543221 112345689999999998764 5889999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.6e-33  Score=297.73  Aligned_cols=246  Identities=25%  Similarity=0.353  Sum_probs=193.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      ..||+|+||.||+|...   .++..|++|.+........+.+.+|+.++++++|+||+++++++..++..++|+||++++
T Consensus        14 ~~lg~g~~g~v~~~~~~---~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          14 VVLGKGTYGIVYAARDL---STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             EEEecCCceEEEEeEec---CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            47999999999999874   356789999887654455667899999999999999999999999999999999999999


Q ss_pred             chhhhhhcc-CCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccccccCcccce
Q 045343          605 TLASFLFGN-LKP--SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       605 sL~~~l~~~-~~l--~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +|.+++... ..+  ++..+..++.||++||+|||+   .+|+|+||||+||+++. ++.++|+|||++.........  
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~--  165 (268)
T cd06624          91 SLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC--  165 (268)
T ss_pred             CHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc--
Confidence            999999764 344  788888999999999999995   59999999999999976 679999999998765432221  


Q ss_pred             eecccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~--~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .....++..|+|||++....  ++.++||||||+++|+|++|+.||..........   +.....  ..     .+.   
T Consensus       166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~~~~~~--~~-----~~~---  232 (268)
T cd06624         166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---FKVGMF--KI-----HPE---  232 (268)
T ss_pred             cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---hhhhhh--cc-----CCC---
Confidence            22345789999999986643  7889999999999999999999986432211110   000000  00     000   


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......+.+.+++.+||+.+|.+|||+.|++++
T Consensus       233 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         233 -IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence             111235678899999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.3e-33  Score=322.23  Aligned_cols=262  Identities=20%  Similarity=0.245  Sum_probs=190.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc------cCCcceEEeEeecC-
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH------HKNLVRLLGFCDEG-  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~~~-  591 (813)
                      ..|.+.++||+|+||+||+|...   ..+..||||+++... ...+++..|+.++++++      |.+++++++++..+ 
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~---~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDR---KRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEc---CCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            45677889999999999999874   356789999986432 22334555666666654      45688999988765 


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC------------
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY------------  659 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~------------  659 (813)
                      .+.++|||++ +++|.+++.....+++..+..++.||+.||.|||++  .+|+||||||+|||++.++            
T Consensus       205 ~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~  281 (467)
T PTZ00284        205 GHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALP  281 (467)
T ss_pred             ceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccC
Confidence            4678999987 778888888778899999999999999999999952  4899999999999998665            


Q ss_pred             ----CEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhh
Q 045343          660 ----NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL  735 (813)
Q Consensus       660 ----~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l  735 (813)
                          .+||+|||.+......     .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...+
T Consensus       282 ~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~  356 (467)
T PTZ00284        282 PDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL  356 (467)
T ss_pred             CCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                4999999987643221     2346799999999999999999999999999999999999999976543222211


Q ss_pred             HHHHHHhhc--------cCccccc----------cccc-c------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          736 TDWAFDCYR--------NEKLDDL----------VEGD-M------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       736 ~~~~~~~~~--------~~~~~~~----------~~~~-~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                      .......+.        ......+          .++. +      ...........+.+|+.+||+.||.+|||++|++
T Consensus       357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L  436 (467)
T PTZ00284        357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT  436 (467)
T ss_pred             HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence            111000000        0000000          0000 0      0000111235678999999999999999999999


Q ss_pred             HH
Q 045343          791 QM  792 (813)
Q Consensus       791 ~~  792 (813)
                      ++
T Consensus       437 ~H  438 (467)
T PTZ00284        437 TH  438 (467)
T ss_pred             cC
Confidence            74

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.4e-33  Score=293.40  Aligned_cols=241  Identities=28%  Similarity=0.468  Sum_probs=190.1

Q ss_pred             cccceeeeeeEEEEEEeccC-------CcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          525 EEVGRGSFGIVYKGVILTTR-------TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~-------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.||+|+||.||+|.+....       .....+++|.+...... ...+.+|+.++++++|+||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999986432       11245788877643322 5678999999999999999999999988 778999


Q ss_pred             EeecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-------CEEEeeccCc
Q 045343          598 YEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-------NARISDFGLA  669 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-------~~kl~DfGla  669 (813)
                      +||+++|+|.+++.... .+++..+..++.||+.||+|||+   .+|+|+||||+|||++.++       .+||+|||++
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999998665 78999999999999999999995   5999999999999999887       7999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCC--CCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      ......      ....++..|+|||++...  .++.++||||||+++|||++ |..|+......+...       .+...
T Consensus       156 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-------~~~~~  222 (259)
T cd05037         156 ITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-------FYQDQ  222 (259)
T ss_pred             cccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-------HHhcC
Confidence            865431      223466789999999876  78899999999999999999 566665432211110       00000


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                        ..     ..    ......+.+++.+||+.+|.+|||+.+|++.|+
T Consensus       223 --~~-----~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         223 --HR-----LP----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             --CC-----CC----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence              00     00    011267889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.4e-33  Score=301.16  Aligned_cols=251  Identities=25%  Similarity=0.349  Sum_probs=201.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..|.+.+.||+|+||.||++...   ..+..||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDI---ATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEEC---CCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            45667789999999999999863   357789999987654445566888999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.. ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.........
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~  171 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence            99999999999864 457888999999999999999995   49999999999999999999999999998765443221


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                        .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..........      ..... .     .+..  
T Consensus       172 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~-~-----~~~~--  235 (297)
T cd06656         172 --RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATN-G-----TPEL--  235 (297)
T ss_pred             --cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccC-C-----CCCC--
Confidence              223457889999999998889999999999999999999999997543211100      00000 0     0000  


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .........+.+++.+||+.+|++||++.+|+++
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0112234667899999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.8e-33  Score=293.49  Aligned_cols=249  Identities=25%  Similarity=0.372  Sum_probs=201.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+++.+.||+|+||.||+|....   .+..+++|.++....  .+++.+|++++++++|+||+++++++.++...++++|
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHKE---TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEcC---CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            45677899999999999998752   467899999875422  5689999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++.. ...+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||++.........
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999999999975 4578999999999999999999995   49999999999999999999999999999876543221


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                        .....++..|+|||.+.+..++.++||||||++++||++|+.|+..........       .....     ...... 
T Consensus       156 --~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-------~~~~~-----~~~~~~-  220 (256)
T cd06612         156 --RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-------MIPNK-----PPPTLS-  220 (256)
T ss_pred             --cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-------hhccC-----CCCCCC-
Confidence              223457889999999999899999999999999999999999997543221110       00000     000000 


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ........+.+++.+||+.+|++|||+.||+++
T Consensus       221 -~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         221 -DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             -chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence             112234678999999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.7e-33  Score=298.96  Aligned_cols=249  Identities=27%  Similarity=0.306  Sum_probs=196.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ++..+.||+|+||+||++...   ..++.+|||.++.....   ..+.+.+|+.++++++|+|++++++.+.+.+..++|
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEc---CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEE
Confidence            455678999999999999875   35679999998653211   224567899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+|+||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            9999999999988643  358899999999999999999995   59999999999999999999999999998765432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....|+..|+|||.+.+..++.++||||||+++|||++|+.||...........   ......     .... .
T Consensus       156 ~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~---~~~~~~-----~~~~-~  223 (285)
T cd05630         156 QT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE---VERLVK-----EVQE-E  223 (285)
T ss_pred             cc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH---HHhhhh-----hhhh-h
Confidence            21   1234689999999999998999999999999999999999999975432111000   000000     0000 0


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQ  791 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~  791 (813)
                          ........+.+++..||+.||++|||     ++|+++
T Consensus       224 ----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         224 ----YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             ----cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence                01123456889999999999999999     888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.3e-33  Score=295.11  Aligned_cols=250  Identities=27%  Similarity=0.388  Sum_probs=199.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc---------chhhhheeeeeeccccCCcceEEeEeecC
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---------EKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      +.+.+.||+|++|.||+|...   ..+..+|+|.+.......         .+.+.+|+.++++++|+||+++++++.+.
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNA---SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA   78 (267)
T ss_pred             ccccceeecCCCeEEEEEEec---CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence            346678999999999999864   356789999886432221         24578899999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +..++|+||+++++|.+++.....+++..+..++.|++.||+|||+   .+++|+||+|+||++++++.++|+|||+++.
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~  155 (267)
T cd06628          79 DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKK  155 (267)
T ss_pred             CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence            9999999999999999999887888999999999999999999995   4999999999999999999999999999987


Q ss_pred             cccCccc----ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          672 LTLNQSK----AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       672 ~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      .......    .......++..|+|||.+.+..++.++||||||+++|+|++|+.||........  +    ... ..  
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~~-~~--  226 (267)
T cd06628         156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA--I----FKI-GE--  226 (267)
T ss_pred             cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--H----HHH-hc--
Confidence            6532111    011234578899999999988899999999999999999999999975432111  0    000 00  


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ...+.    ........+.+++.+||+.+|.+||++.||+++
T Consensus       227 ---~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         227 ---NASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             ---cCCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence               00111    112345778899999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=9.2e-34  Score=309.79  Aligned_cols=263  Identities=25%  Similarity=0.282  Sum_probs=201.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-c-----CCcceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-H-----KNLVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~  591 (813)
                      ..+|++.+.||+|.||.|-|+...   +.++.||||+++... .-..+...|+.+|..++ |     -|+|+++++|...
T Consensus       185 ~~rY~V~e~LGkGtFGQVvk~~d~---~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr  260 (586)
T KOG0667|consen  185 AYRYEVLEVLGKGSFGQVVKAYDH---KTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR  260 (586)
T ss_pred             EEEEEEEEEecccccceeEEEEec---CCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence            337788999999999999999875   467899999998642 33456778999999996 4     3799999999999


Q ss_pred             CceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC--CCCEEEeecc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARISDFG  667 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfG  667 (813)
                      ++.+||+|.+ ..+|.++|+.+  ..++...++.|+.||+.||.+||+   .+|||+||||+||||.+  ...+||+|||
T Consensus       261 ~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFG  336 (586)
T KOG0667|consen  261 NHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFG  336 (586)
T ss_pred             cceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecc
Confidence            9999999987 45999999876  468899999999999999999995   59999999999999974  3479999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH-------
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF-------  740 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-------  740 (813)
                      .|......     ...+..+..|+|||++.+.+|+.++||||||||+.||++|.+.|.++...++......+.       
T Consensus       337 SSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m  411 (586)
T KOG0667|consen  337 SSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM  411 (586)
T ss_pred             cccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence            99875533     235667889999999999999999999999999999999988887665433322111110       


Q ss_pred             -Hhh-------cc----------Cc-----------------ccccccc-ccc---ccccHHHHHHHHHHHHHhcccCCC
Q 045343          741 -DCY-------RN----------EK-----------------LDDLVEG-DME---ALNDIKCVEKLVMVSIWCIQEDPS  781 (813)
Q Consensus       741 -~~~-------~~----------~~-----------------~~~~~~~-~~~---~~~~~~~~~~l~~l~~~Cl~~dP~  781 (813)
                       +..       ..          ..                 ..+...+ ..+   .......-+.+.+++.+||+.||.
T Consensus       412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~  491 (586)
T KOG0667|consen  412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA  491 (586)
T ss_pred             HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence             000       00          00                 0000000 000   001113345689999999999999


Q ss_pred             CCCCHHHHHHHH
Q 045343          782 LRPTMKKVLQML  793 (813)
Q Consensus       782 ~RPt~~evl~~L  793 (813)
                      +|+|..+++++=
T Consensus       492 ~R~tp~qal~Hp  503 (586)
T KOG0667|consen  492 ERITPAQALNHP  503 (586)
T ss_pred             hcCCHHHHhcCc
Confidence            999999999763

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-33  Score=304.72  Aligned_cols=253  Identities=20%  Similarity=0.227  Sum_probs=193.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |++.+.||+|+||+||++...   ..+..||||.+...   .....+.+.+|+.++..++|+||+++++++.+++..++|
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           3 FEILKVIGRGAFGEVAVVKMK---NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             ceEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence            567889999999999999875   35678999998642   122334578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++.. ...+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence            999999999999975 4578899999999999999999995   599999999999999999999999999987654332


Q ss_pred             ccceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ... .....||+.|+|||++..     ..++.++|||||||++|||++|+.||......+..      ...........+
T Consensus       157 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~------~~i~~~~~~~~~  229 (331)
T cd05597         157 TVQ-SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY------GKIMNHKEHFQF  229 (331)
T ss_pred             Ccc-ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH------HHHHcCCCcccC
Confidence            211 223468999999999863     45788999999999999999999999754322110      011111100011


Q ss_pred             ccccccccccHHHHHHHHHHHHHhccc--CCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQE--DPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~--dP~~RPt~~evl~~  792 (813)
                      ..      .....++.+.+++.+|+..  ++..||++.+++++
T Consensus       230 ~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         230 PP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             CC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            00      0112356677888877754  44448899999987

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=4.8e-33  Score=296.91  Aligned_cols=264  Identities=23%  Similarity=0.324  Sum_probs=200.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +++.+.||+|++|.||+|...   .++..||+|++....  ....+.+.+|+.++++++|+||+++++++..+...++||
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNR---ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             eeeeeeecccCCeEEEEEEEC---CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence            566788999999999999874   356789999886432  223356789999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||++++.|..++.....+++..++.++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++.........
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  156 (286)
T cd07847          80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD  156 (286)
T ss_pred             eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence            999999999888777788999999999999999999995   59999999999999999999999999999876543221


Q ss_pred             ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH-H-------hhccCc-c
Q 045343          679 AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF-D-------CYRNEK-L  748 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-~-------~~~~~~-~  748 (813)
                        .....++..|+|||.+.+ ..++.++||||||++++||++|+.||......+......... .       .+.... .
T Consensus       157 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd07847         157 --YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF  234 (286)
T ss_pred             --ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence              223457889999999876 457889999999999999999999997554322211100000 0       000000 0


Q ss_pred             ccccccccccccc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDLVEGDMEALND-----IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~~~~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....+.......     ......+.+++.+||+.+|++||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            0000000000000     1225678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.1e-33  Score=312.29  Aligned_cols=252  Identities=22%  Similarity=0.273  Sum_probs=196.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||+|+||.||++...   ..+..+|||.++...   ......+.+|+.++.+++|+||+++++.+.+++..++|
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKK---DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            456789999999999999874   356789999986432   22345678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~  156 (360)
T cd05627          80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR  156 (360)
T ss_pred             EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence            9999999999999888889999999999999999999995   5999999999999999999999999999875532110


Q ss_pred             c---------------------------------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCC
Q 045343          678 K---------------------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       678 ~---------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      .                                 .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf  236 (360)
T cd05627         157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (360)
T ss_pred             cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence            0                                 0011346999999999999999999999999999999999999999


Q ss_pred             CcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHH
Q 045343          725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQM  792 (813)
Q Consensus       725 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~  792 (813)
                      ..........      ......  ..+     ..+......+.+.+++.+++. ||.+|++   +.|++++
T Consensus       237 ~~~~~~~~~~------~i~~~~--~~~-----~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         237 CSETPQETYR------KVMNWK--ETL-----VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCCCHHHHHH------HHHcCC--Cce-----ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            7554322110      000000  000     000111134567777777664 9999985   6777765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=4.9e-33  Score=296.97  Aligned_cols=250  Identities=26%  Similarity=0.304  Sum_probs=197.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +...+.||+|+||+||++...   .+++.+|+|.++....   .....+.+|++++++++|+||+++.+.+..++..++|
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVR---ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEC---CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEE
Confidence            345678999999999999875   3577899999864321   2234577899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+||++++++.+||+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            9999999999888653  468999999999999999999995   59999999999999999999999999999765432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....|+..|+|||.+.+..++.++|+||||+++|||++|+.||..........  . .........  ..    
T Consensus       156 ~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~--~-~~~~~~~~~--~~----  223 (285)
T cd05632         156 ES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE--E-VDRRVLETE--EV----  223 (285)
T ss_pred             Cc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH--H-HHHhhhccc--cc----
Confidence            11   223468999999999998889999999999999999999999997543221110  0 011010000  00    


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                          ........+.+++..|++.||++||+     +.+++++
T Consensus       224 ----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         224 ----YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             ----cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence                11123456789999999999999999     6777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.8e-33  Score=294.80  Aligned_cols=254  Identities=26%  Similarity=0.368  Sum_probs=198.4

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc----------cchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD----------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ...+.||+|+||.||+|...   .++..+|||.++.....          ..+.+..|+.++++++|+||+++++++...
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   80 (272)
T cd06629           4 VKGELIGKGTYGRVYLALNV---TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE   80 (272)
T ss_pred             eecceecccCceEEEEEeec---CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence            44678999999999999864   35678999987532111          123577899999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +..++|+||+++++|.+++.....+++..+..++.||+.||.|||+   .+++|+||+|+||+++.++.++|+|||+++.
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~  157 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKK  157 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence            9999999999999999999887888999999999999999999995   4999999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ..............++..|+|||.+....  ++.++|+||||++++|+++|..|+......+.      ........ ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~  230 (272)
T cd06629         158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA------MFKLGNKR-SA  230 (272)
T ss_pred             ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH------HHHhhccc-cC
Confidence            54322221123356889999999987654  78899999999999999999999863322110      01111111 11


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+...    ........+.+++..||+.+|.+||++.+|+++
T Consensus       231 ~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         231 PPIPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CcCCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            111111    112345788999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-33  Score=295.26  Aligned_cols=248  Identities=27%  Similarity=0.377  Sum_probs=201.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||.|++|.||+|...   .++..+++|.+.... ......+.+|+.++++++|+||+++++++.++...++|+|
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDK---RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEEC---CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            566788999999999999874   357889999986532 2334568899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++... .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++........ 
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-  154 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK-  154 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccc-
Confidence            99999999998765 78999999999999999999995   48999999999999999999999999999877643221 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....++..|+|||.+.+..++.++||||||+++|||++|+.||.........       ..........+.+      
T Consensus       155 -~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~-------~~~~~~~~~~~~~------  220 (274)
T cd06609         155 -RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL-------FLIPKNNPPSLEG------  220 (274)
T ss_pred             -cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH-------HHhhhcCCCCCcc------
Confidence             23346788999999999888999999999999999999999999754321110       0011111111110      


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ......+.+++.+||+.+|++|||+++++++
T Consensus       221 --~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         221 --NKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             --cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence              0135678899999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.2e-33  Score=307.05  Aligned_cols=257  Identities=21%  Similarity=0.288  Sum_probs=189.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|.+.+.||+|+||.||+|...   ..+..||+|....      .....|+.++++++|+||+++++++.+....++|+|
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKP---GQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEEC---CCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            4677899999999999999874   3566899997432      234568899999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ++. ++|.+++.. ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... 
T Consensus       138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-  212 (357)
T PHA03209        138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA-  212 (357)
T ss_pred             ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCcc-
Confidence            985 577777754 4678999999999999999999995   4999999999999999999999999999975432211 


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCC-Ccccch--hh-----hhhHHHHHHh-hccCccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGE--EY-----AILTDWAFDC-YRNEKLD  749 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~-~~~~~~--~~-----~~l~~~~~~~-~~~~~~~  749 (813)
                        .....||..|+|||++.+..++.++|||||||++|||+++..++ ......  ..     ..+....... .......
T Consensus       213 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  290 (357)
T PHA03209        213 --FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP  290 (357)
T ss_pred             --cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence              23456899999999999989999999999999999999965554 322111  00     0111100000 0000000


Q ss_pred             ---------ccccc---------cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 ---------DLVEG---------DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ---------~~~~~---------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                               ..++.         .............+.+++.+||+.||.+|||+.||+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence                     00000         00000011223456679999999999999999999875

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.7e-33  Score=296.52  Aligned_cols=252  Identities=21%  Similarity=0.316  Sum_probs=199.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..|++.++||+|+||.||+|...   ..+..+++|.+........+.+.+|+.++++++|+||+++++.+..+...++||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNK---ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI   88 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEEC---CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence            34677889999999999999874   356789999987655555667889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|..++.. ...+++..+..++.|++.+|+|||+   .+++|+||||+||+++.++.+||+|||++........
T Consensus        89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  165 (292)
T cd06644          89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ  165 (292)
T ss_pred             ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence            99999999888754 4568999999999999999999995   4999999999999999999999999999875432211


Q ss_pred             cceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      .  .....++..|+|||.+.     ...++.++|||||||++|||++|+.||........  .    ..... ...    
T Consensus       166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~----~~~~~-~~~----  232 (292)
T cd06644         166 R--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--L----LKIAK-SEP----  232 (292)
T ss_pred             c--cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH--H----HHHhc-CCC----
Confidence            1  22345788999999984     34567899999999999999999999865432111  0    01100 000    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       +..  .........+.+++.+||+.+|++||++.+++++
T Consensus       233 -~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         233 -PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             -ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence             000  0111334678899999999999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.7e-33  Score=309.22  Aligned_cols=263  Identities=25%  Similarity=0.306  Sum_probs=193.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  592 (813)
                      ..|.+.+.||+|+||.||++...   ..+..||||++....  .....++.+|+.+++.++|+||+++++++....    
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDT---VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEc---CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            45677899999999999999864   357889999986432  233456788999999999999999999986443    


Q ss_pred             --ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          593 --NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       593 --~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                        ..++||||+++ +|...+.  ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876          98 FQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             cceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence              46999999976 4555553  347788899999999999999995   499999999999999999999999999997


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hH-------------
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LT-------------  736 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~-------------  736 (813)
                      .......   .....+|..|+|||++.+..++.++||||||+++|||++|+.||.......... +.             
T Consensus       172 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T cd07876         172 TACTNFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR  248 (359)
T ss_pred             ccccCcc---CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence            6543221   234568999999999999999999999999999999999999997543211100 00             


Q ss_pred             --HHHHHhhcc-C-----cccccccccc---cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          737 --DWAFDCYRN-E-----KLDDLVEGDM---EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       737 --~~~~~~~~~-~-----~~~~~~~~~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        ......... .     ...+......   ...........+.+++.+||+.||++|||+.|++++-
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence              000000000 0     0000000000   0000112246688999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.5e-33  Score=307.35  Aligned_cols=262  Identities=25%  Similarity=0.284  Sum_probs=193.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC-----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----  591 (813)
                      ..|.+.+.||+|+||.||++...   ..++.||||++....  ....+.+.+|+.+++.++|+||+++++++...     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDA---ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEEC---CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            45677889999999999999864   356789999986532  22345678899999999999999999987543     


Q ss_pred             -CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          592 -QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       592 -~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                       ...++||||+++ +|.+++..  .+++..+..++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence             357999999975 66666643  47788899999999999999995   599999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHH------------
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTD------------  737 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~------------  737 (813)
                      .......   .....+|..|+|||++.+..++.++|||||||++|||++|+.||......+... +..            
T Consensus       175 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T cd07875         175 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  251 (364)
T ss_pred             ccCCCCc---ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence            6543221   234568999999999999999999999999999999999999997543321110 000            


Q ss_pred             ---HHHHhhcc-Ccc-----cccccccc---cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 ---WAFDCYRN-EKL-----DDLVEGDM---EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ---~~~~~~~~-~~~-----~~~~~~~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ........ ...     .++.....   ...........+.+++.+||+.||.+|||+.|++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence               00000000 000     00000000   000011124578899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.9e-33  Score=308.49  Aligned_cols=262  Identities=25%  Similarity=0.293  Sum_probs=193.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC-----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----  591 (813)
                      ..|.+.+.||+|+||.||++...   ..++.+|||++....  ....+.+.+|+.+++.++|+||+++++++...     
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEec---CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            35667789999999999999764   356789999986532  22335677899999999999999999988543     


Q ss_pred             -CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          592 -QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       592 -~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                       ...++||||+++ +|.+.+..  .+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence             346999999975 56665543  47888899999999999999995   599999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHH------------
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTD------------  737 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~------------  737 (813)
                      .......   .....+|..|+|||++.+..++.++|||||||++|||++|+.||......+.. ....            
T Consensus       168 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (355)
T cd07874         168 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_pred             cCCCccc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            6543221   23456899999999999989999999999999999999999999754321110 0000            


Q ss_pred             ---HHHHhhcc-Ccccccc------ccccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 ---WAFDCYRN-EKLDDLV------EGDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ---~~~~~~~~-~~~~~~~------~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ........ .....+.      +....  ..........+.+++.+||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence               00000000 0000000      00000  00111234678899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=3.8e-33  Score=292.50  Aligned_cols=245  Identities=29%  Similarity=0.466  Sum_probs=195.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.+.||+|+||.||++..     .+..+|+|.++..  .....+.+|+.++++++|+|++++++++..+ ..++|+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~   77 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-----TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM   77 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-----CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence            4567889999999999999864     5667999998643  2345788999999999999999999998654 579999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++...  ..+++..++.++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~  154 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV  154 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence            999999999999754  357899999999999999999995   599999999999999999999999999987643221


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                           .....+..|+|||.+.+..++.++|+||||+++|||++ |+.||......+..       .......        
T Consensus       155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-------~~~~~~~--------  214 (254)
T cd05083         155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-------ECVEKGY--------  214 (254)
T ss_pred             -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH-------HHHhCCC--------
Confidence                 12234567999999988889999999999999999998 99998654322211       1111110        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                       ........+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus       215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence             000111335778899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=5e-33  Score=299.38  Aligned_cols=261  Identities=22%  Similarity=0.311  Sum_probs=196.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.++||+|+||.||+|...   ..+..||+|.++.... .....+.+|+.++++++|+||+++++++..+...++|+
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSK---LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEc---CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            4667789999999999999874   3567899999864322 22345778999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||++ ++|.+++.. ...+++..+..++.||++||.|||+   .+|+|+||||+||+++.++.+||+|||++........
T Consensus        84 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          84 EYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            9997 588888765 3567899999999999999999995   5999999999999999999999999999976543221


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc---cCcccccc-
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR---NEKLDDLV-  752 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~-  752 (813)
                      .  .....++..|+|||.+.+. .++.++||||||+++|||++|+.||......+...   .......   ......+. 
T Consensus       160 ~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  234 (301)
T cd07873         160 T--YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH---FIFRILGTPTEETWPGILS  234 (301)
T ss_pred             c--ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChhhchhhhc
Confidence            1  2233568899999988654 57889999999999999999999997554322111   1111100   00000000 


Q ss_pred             --------cccccc----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 --------EGDMEA----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 --------~~~~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                              .+....    .........+.+++.+||+.||.+|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence                    000000    0011234578899999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=5.9e-33  Score=292.91  Aligned_cols=250  Identities=23%  Similarity=0.319  Sum_probs=197.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc------ccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ------DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      +...+.||+|+||+||+|...    ++..+|||.++....      .....+.+|++++++++|+||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   77 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTN----QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTI   77 (265)
T ss_pred             ccccceEeccCCeEEEEEEEc----CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeE
Confidence            345678999999999999753    567899998864321      1124588899999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++|+||+++++|.+++.....+++..+..++.|++.||+|||+   .+|+|+||+|+||+++.++.++|+|||++.....
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          78 SIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            9999999999999999877788999999999999999999995   4899999999999999999999999999876532


Q ss_pred             Ccc----cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          675 NQS----KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       675 ~~~----~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ...    ........++..|+|||.+.+..++.++||||||++++||++|+.||..........      ......   .
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~------~~~~~~---~  225 (265)
T cd06631         155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF------YIGAHR---G  225 (265)
T ss_pred             ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH------Hhhhcc---C
Confidence            111    111223458899999999998889999999999999999999999997433211110      000000   0


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      . .+..    .......+.+++.+||+.+|.+||++.|+++
T Consensus       226 ~-~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         226 L-MPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             C-CCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0 0011    1124567899999999999999999999886

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=9.3e-33  Score=293.53  Aligned_cols=249  Identities=27%  Similarity=0.372  Sum_probs=201.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+...++||.|+||.||+|...   ..+..||||.++... ......+.+|+.++++++|+||+++++++.++...++|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDN---RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII   80 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEc---cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            34556688999999999999874   356789999886432 23345788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.. ..+++.....++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999999999865 457888899999999999999995   5999999999999999999999999999977654322


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .  .....++..|+|||.+.+..++.++|+||||+++|||++|..|+..........       ....         ...
T Consensus       157 ~--~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~~---------~~~  218 (277)
T cd06640         157 K--RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-------LIPK---------NNP  218 (277)
T ss_pred             c--cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-------hhhc---------CCC
Confidence            1  223457889999999988889999999999999999999999987543221110       0000         001


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......+..+.+++.+||+.+|.+||++.+++++
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            11122456788899999999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=5.4e-33  Score=291.40  Aligned_cols=248  Identities=23%  Similarity=0.321  Sum_probs=198.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.++||+|+||.||++...   ..+..+++|.++... ....+.+.+|+.++++++|+||+++++.+.++...++|+|
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHV---NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEc---CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            457789999999999999874   356789999886432 2334568889999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          600 FLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       600 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |+++++|.+++...  ..+++...+.++.||+.||.|||+   .+|+|+||||+||++++++.++|+|||++........
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence            99999999988642  457889999999999999999995   4999999999999999999999999999976643221


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .  .....++..|+|||++.+..++.++|+||||+++|+|++|+.||........      ... ........+      
T Consensus       156 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~-~~~~~~~~~------  220 (255)
T cd08219         156 Y--ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL------ILK-VCQGSYKPL------  220 (255)
T ss_pred             c--cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH------HHH-HhcCCCCCC------
Confidence            1  2335688899999999988899999999999999999999999975432111      001 111111111      


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         .......+.+++.+||+.||++||++.||+..
T Consensus       221 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 ---PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ---CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence               11234568899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-33  Score=297.32  Aligned_cols=266  Identities=24%  Similarity=0.310  Sum_probs=203.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+++.+.||+|+||.||+|...   .++..|+||+++...  ....+.+.+|++++++++|+||+++++++..++..++|
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~---~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv   78 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNK---ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV   78 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeC---CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence            3567789999999999999874   346789999886532  22345788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||++++.|..++.....+++..+..++.||+.||.|||+.   +++|+||+|+||++++++.+||+|||++........
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence            99999988887777667789999999999999999999964   999999999999999999999999999987665432


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---------C-
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---------E-  746 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---------~-  746 (813)
                      .. .....++..|+|||++.+. .++.++||||||+++|+|++|+.||......+..............         . 
T Consensus       156 ~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07833         156 SP-LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR  234 (288)
T ss_pred             cc-ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence            11 2335678899999999888 7899999999999999999999998754332211110000000000         0 


Q ss_pred             ----ccccccccc-ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 ----KLDDLVEGD-MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ----~~~~~~~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          ......+.. .........+..+.+++.+||+.+|++||++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence                000000000 0000111236789999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.6e-34  Score=309.45  Aligned_cols=242  Identities=23%  Similarity=0.259  Sum_probs=187.7

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeecc---ccCCcceEEeEeecCCceEEEEee
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQT---HHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      ||+|+||+||+|...   ..+..||||++......   ....+..|..++.+.   +|+||+++++.+.+.+..++||||
T Consensus         1 lG~G~~g~Vy~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~   77 (330)
T cd05586           1 IGKGTFGQVYQVRKK---DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY   77 (330)
T ss_pred             CCCCCceEEEEEEEC---CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence            799999999999874   35678999998643211   122344555666554   699999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.....+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++........  
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--  152 (330)
T cd05586          78 MSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--  152 (330)
T ss_pred             CCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--
Confidence            9999999999888889999999999999999999995   49999999999999999999999999998764322211  


Q ss_pred             eecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                      .....||..|+|||++.+. .++.++|||||||++|||++|+.||......+.       ......+.. .+.       
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~-------~~~i~~~~~-~~~-------  217 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM-------YRNIAFGKV-RFP-------  217 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH-------HHHHHcCCC-CCC-------
Confidence            2345689999999998765 478999999999999999999999975432211       011111110 000       


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRP----TMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RP----t~~evl~~  792 (813)
                       .......+.+++.+||+.||.+||    ++.+++++
T Consensus       218 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         218 -KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             -CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence             012346778999999999999998    56666653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.5e-33  Score=302.71  Aligned_cols=262  Identities=17%  Similarity=0.184  Sum_probs=193.2

Q ss_pred             ccccccee--eeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          523 FKEEVGRG--SFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       523 ~~~~LG~G--~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.++||+|  +|++||++...   .++..||||+++...  ....+.+.+|+.+++.++||||+++++++..++..++|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK---PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT   78 (327)
T ss_pred             hhhhccccccceEEEEEEeec---ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence            56789999  78999999874   467899999986532  222345778999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.+++...  ..+++..++.++.|++.||+|||+   .+|+||||||+|||++.++.++++||+.........
T Consensus        79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~  155 (327)
T cd08227          79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG  155 (327)
T ss_pred             eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence            999999999999653  458899999999999999999995   599999999999999999999999998654432111


Q ss_pred             c-c----ceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc-----
Q 045343          677 S-K----AIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR-----  744 (813)
Q Consensus       677 ~-~----~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-----  744 (813)
                      . .    .......++..|+|||++.+  ..++.++|||||||++|||++|+.||......... . ........     
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~-~~~~~~~~~~~~~  233 (327)
T cd08227         156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-L-EKLNGTVPCLLDT  233 (327)
T ss_pred             ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHH-H-HHhcCCccccccc
Confidence            1 0    00112346778999999976  45889999999999999999999999743221100 0 00000000     


Q ss_pred             ----cCcc----------ccccc------------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 ----NEKL----------DDLVE------------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ----~~~~----------~~~~~------------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .+.+          ..+.+            ..............+.+++.+||+.||++|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence                0000          00000            000001112345678899999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.7e-34  Score=307.17  Aligned_cols=247  Identities=26%  Similarity=0.403  Sum_probs=197.7

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEee--cc--ccccchhhhheeeeeeccccCCcceEEeEeecCCc--eE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN--RL  595 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~--~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~--~~  595 (813)
                      .|.++||+|+|-+||||.+.   .++..||--.++  +.  .....+.|..|+.+|+.|+|+|||+++.+..+...  ..
T Consensus        43 k~~evLGrGafKtVYka~De---~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in  119 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDE---EEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTIN  119 (632)
T ss_pred             ehhhhcccccceeeeecccc---ccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceee
Confidence            35578999999999999873   456666543332  11  22334679999999999999999999999877665  78


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~  674 (813)
                      +|+|.+..|+|..|+....+.+.+.+.+|+.||++||.|||.+ .++|+|||||-.||+|+ ..|.+||+|+|||..+..
T Consensus       120 ~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            9999999999999999999999999999999999999999987 88999999999999997 568999999999998875


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....    ...|||.|||||.+. ..|++.+||||||++|+||+|+..|+..-....+  +-+.+..-.....+.++-  
T Consensus       199 s~ak----svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ--IYKKV~SGiKP~sl~kV~--  269 (632)
T KOG0584|consen  199 SHAK----SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ--IYKKVTSGIKPAALSKVK--  269 (632)
T ss_pred             cccc----eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH--HHHHHHcCCCHHHhhccC--
Confidence            5432    367999999999987 6899999999999999999999999974332211  111111112222222222  


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                ..++.++|.+||.. ..+|||+.|+++.
T Consensus       270 ----------dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  270 ----------DPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             ----------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence                      35678999999999 9999999999953

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.5e-33  Score=290.85  Aligned_cols=252  Identities=31%  Similarity=0.498  Sum_probs=201.3

Q ss_pred             hcccccceeeeeeEEEEEEeccC-CcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.||+|+||.||++...... .....||+|.++..... ..+.+..|+.++.+++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            35688999999999999986432 22478999999754332 45678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCC--CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          600 FLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |+++++|.+++.....  +++..+..++.|++.||+|||+   .+++|+||||+||++++++.++|+|||++........
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence            9999999999976544  8999999999999999999995   4999999999999999999999999999987654422


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .. .....++..|+|||.+.+..++.++||||||++++||++ |+.||.........   .    ........       
T Consensus       159 ~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~---~----~~~~~~~~-------  223 (258)
T smart00219      159 YK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVL---E----YLKKGYRL-------  223 (258)
T ss_pred             cc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHhcCCCC-------
Confidence            21 112336789999999988889999999999999999998 78887653221111   1    11111100       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        ......+..+.+++.+|++.+|++|||+.|+++.|
T Consensus       224 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      224 --PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             --CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence              01112457789999999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.5e-33  Score=300.71  Aligned_cols=196  Identities=23%  Similarity=0.400  Sum_probs=158.3

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee--cCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD--EGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV~e~~~  602 (813)
                      .+||+|+||.||+|..... ..+..+|+|.++..  .....+.+|++++++++|+||+++++++.  .+...++|+||+.
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~-~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDG-KDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCC-CccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            5799999999999986432 35678999988643  22346788999999999999999999884  3456799999987


Q ss_pred             CCchhhhhhc---------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE----cCCCCEEEeeccCc
Q 045343          603 NGTLASFLFG---------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLA  669 (813)
Q Consensus       603 ~gsL~~~l~~---------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGla  669 (813)
                      + +|.+++..         ...+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            5 66666532         1247888999999999999999995   599999999999999    56678999999999


Q ss_pred             cccccCccc-ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcc
Q 045343          670 KLLTLNQSK-AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIE  727 (813)
Q Consensus       670 ~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~  727 (813)
                      +........ .......+|..|+|||.+.+. .++.++||||||+++|||++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            876543221 112345689999999998764 5789999999999999999999999743

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-33  Score=294.65  Aligned_cols=251  Identities=23%  Similarity=0.314  Sum_probs=200.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+++.++||.|+||.||++...   .++..+++|..+.......+.+..|+.++++++|+||+++++.+..+...++|||
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHK---ETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEc---CCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            4677889999999999999874   2567899999876544455678899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.++|+|||++.........
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence            99999999998764 5689999999999999999999954   9999999999999999999999999998765432211


Q ss_pred             ceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                        .....++..|+|||.+.     ...++.++||||||+++|||++|+.||........  +..    . .....     
T Consensus       160 --~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~~----~-~~~~~-----  225 (280)
T cd06611         160 --RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLK----I-LKSEP-----  225 (280)
T ss_pred             --cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HHH----H-hcCCC-----
Confidence              23345889999999875     34567899999999999999999999975432211  111    0 00000     


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.+.  ........+.+++..||+.+|.+||++.+|+++
T Consensus       226 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         226 PTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            0000  111234678899999999999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=3e-33  Score=298.60  Aligned_cols=265  Identities=25%  Similarity=0.329  Sum_probs=199.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ++++.++||+|+||.||+|...   ..++.+|+|++......  ..+.+.+|++++++++|+||+++++++..+...++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   78 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHK---ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV   78 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEEC---CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence            3567789999999999999874   34678999987643222  245688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+++++|..+......+++..++.++.||++||+|||+   .+++|+||+|+||++++++.++|+|||++........
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07846          79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  155 (286)
T ss_pred             EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence            9999999999888776678999999999999999999995   4999999999999999999999999999987654332


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHHHHHHh-------hccCcc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDC-------YRNEKL  748 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~-------~~~~~~  748 (813)
                      .  .....++..|+|||.+.+ ..++.++||||||++++||++|+.||......+. ..+.......       ......
T Consensus       156 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07846         156 V--YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL  233 (286)
T ss_pred             c--cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence            1  233457889999998865 4577899999999999999999999865433211 1110000000       000000


Q ss_pred             -cccccccccc-----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 -DDLVEGDMEA-----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 -~~~~~~~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .....+....     .........+.+++.+||+.+|++||++.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence             0000000000     0011235678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=8e-33  Score=290.23  Aligned_cols=249  Identities=23%  Similarity=0.339  Sum_probs=202.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.+.||+|+||.||.+...   .++..+++|.+...  .....+++.+|+.++++++|+||+++++++.+.+..++||
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~   78 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRT---EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEM   78 (256)
T ss_pred             ceEeeEecccCCceEEEEEEc---CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEE
Confidence            567789999999999988764   35678999987643  2334457889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++...  ..+++..+..++.|++++|.|||+   .+++|+||+|+||++++++.+||+|||++.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence            999999999999764  467899999999999999999995   489999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .  ......++..|+|||.+.+...+.++||||||++++||++|+.||......+.      ..... .+....      
T Consensus       156 ~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~------~~~~~-~~~~~~------  220 (256)
T cd08221         156 S--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL------VVKIV-QGNYTP------  220 (256)
T ss_pred             c--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH------HHHHH-cCCCCC------
Confidence            2  12345689999999999888889999999999999999999999975432211      11111 111111      


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                         ........+.+++.+||+.+|.+||++.++++++
T Consensus       221 ---~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         221 ---VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             ---CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence               0123356788999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=8.1e-33  Score=292.53  Aligned_cols=253  Identities=26%  Similarity=0.364  Sum_probs=198.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----------cccchhhhheeeeeec-cccCCcceEEeEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----------QDGEKEFKNEVVVIGQ-THHKNLVRLLGFCD  589 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~  589 (813)
                      +.+.+.||+|+||.||+|....+  .+..+|||.+....          .....++..|+.++.+ ++|+||+++++++.
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   79 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNN--GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL   79 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCC--CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence            45678899999999999998532  45789999875321          1122346678887764 79999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEee
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD  665 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~D  665 (813)
                      ++...++||||+++++|.+++..    ...+++..+++++.|++.||.|||+  ..+++|+||+|+||+++.++.+||+|
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEec
Confidence            99999999999999999988743    3467899999999999999999995  24799999999999999999999999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ||++.......   ......++..|+|||.+.+..++.++||||||+++|||++|+.||.........   .    ....
T Consensus       158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~---~----~~~~  227 (269)
T cd08528         158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA---T----KIVE  227 (269)
T ss_pred             ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH---H----HHhh
Confidence            99998765433   133456889999999999888999999999999999999999998644321110   0    0011


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      ......        ........+.+++.+||+.||++||++.||..+|++
T Consensus       228 ~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         228 AVYEPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             ccCCcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence            111100        111234678899999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.4e-32  Score=295.35  Aligned_cols=260  Identities=23%  Similarity=0.271  Sum_probs=197.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-----cchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-----GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +++.+.||+|++|.||+|...   .++..|+||+++.....     ....+..|++++++++|+||+++++++.+.+..+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDK---ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNIN   78 (298)
T ss_pred             ceeeeeeeeccccEEEEEEEC---CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEE
Confidence            456788999999999999874   34678999999754322     2345678999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+ +++|.+++.... .+++..+..++.||++||.|||+   .+|+|+||||+||+++.++.++|+|||+++....
T Consensus        79 lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          79 LVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             EEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            999999 999999997765 78999999999999999999995   4999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc--------
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN--------  745 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--------  745 (813)
                      ....  .....++..|+|||.+.+ ..++.++||||||++++||++|..+|......+..  .. .......        
T Consensus       155 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~  229 (298)
T cd07841         155 PNRK--MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL--GK-IFEALGTPTEENWPG  229 (298)
T ss_pred             CCcc--ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH--HH-HHHHcCCCchhhhhh
Confidence            3211  222346788999998855 45788999999999999999998877654432111  00 1110000        


Q ss_pred             -Cccccccccccccc-----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 -EKLDDLVEGDMEAL-----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 -~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ..............     ........+.+++.+||+.+|.+|||+.||+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence             00000000000000     011235778999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=5.6e-33  Score=293.37  Aligned_cols=250  Identities=21%  Similarity=0.299  Sum_probs=192.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-----ccchhhhheeeeeeccccCCcceEEeEeecC--Cc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-----DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~  593 (813)
                      +...+.||+|+||.||+|...   ..+..+++|++.....     ...+.+.+|+.++++++|+||+++++++.+.  ..
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDV---DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             ccccceecCCCCEEEEEEEEc---CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCE
Confidence            455688999999999999874   3567899998864321     1234578899999999999999999988653  56


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++++||+++++|.+++.....+++...+.++.|++.||.|||+   .+|+|+||||+||+++.++.+||+|||+++.+.
T Consensus        81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~  157 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  157 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence            78999999999999999887778999999999999999999994   599999999999999999999999999998664


Q ss_pred             cCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........      ........     .
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~~~-----~  226 (266)
T cd06651         158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIATQP-----T  226 (266)
T ss_pred             cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhcCC-----C
Confidence            32111 111234578899999999988899999999999999999999999974422111      01110000     0


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+..    .....+.+.+++ +||..+|++||+++||+++
T Consensus       227 ~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         227 NPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             CCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            1111    112234555666 6888999999999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-33  Score=293.68  Aligned_cols=249  Identities=22%  Similarity=0.368  Sum_probs=208.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..|.+.+.||+|.|..|-++...   -.|..||||++.+..-.  ....+..|++.|+.++|||||+|+.+......+||
T Consensus        18 GLYDLekTlG~GHFAVVKLArHV---FTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHV---FTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhh---cccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            34667788999999999887664   36789999999764322  23467889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE-cCCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL-DDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll-~~~~~~kl~DfGla~~~~~  674 (813)
                      |+|.-++|+|.|||- +...+.+....+++.||+.|+.|+|+   ..+|||||||+||.+ ..-|-+||.|||++..+.+
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            999999999999985 45789999999999999999999995   599999999999876 5678999999999988877


Q ss_pred             CcccceeecccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTIT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .+.   ....+|...|-|||++.+..|+ +++||||||||||.|++|+.||+...+.+.               +..++|
T Consensus       172 G~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---------------LTmImD  233 (864)
T KOG4717|consen  172 GKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---------------LTMIMD  233 (864)
T ss_pred             cch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---------------hhhhhc
Confidence            654   4567899999999999998886 579999999999999999999986554332               223334


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      -....  +.....++.+||..||+.||.+|.+.+||+..-
T Consensus       234 CKYtv--PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~  271 (864)
T KOG4717|consen  234 CKYTV--PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTS  271 (864)
T ss_pred             ccccC--chhhhHHHHHHHHHHHhcCchhhccHHHHhccc
Confidence            33221  234678999999999999999999999998653

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.1e-32  Score=289.16  Aligned_cols=248  Identities=25%  Similarity=0.334  Sum_probs=198.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-ceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV  597 (813)
                      |++.+.||+|++|.||++...   .+++.+++|++....  ....+.+.+|++++++++|+|++++++.+...+ ..++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHR---TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIV   78 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEc---CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEE
Confidence            567899999999999999874   345789999986432  223456888999999999999999999876544 57899


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++...  ..+++.++..++.|++.|++|||+   .+++|+||||+||+++.++.++|+|||++......
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence            9999999999999753  457999999999999999999995   49999999999999999999999999999876433


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....+++.|+|||.+.+..++.++||||||++++||++|+.||........      ..... .+....     
T Consensus       156 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~------~~~~~-~~~~~~-----  221 (257)
T cd08223         156 CDM--ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL------VYRII-EGKLPP-----  221 (257)
T ss_pred             CCc--cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHH-hcCCCC-----
Confidence            221  2345688999999999998899999999999999999999999874332111      11111 111110     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          ........+.+++.+|++.+|++||++.+++++
T Consensus       222 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         222 ----MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             ----CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                112345678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.2e-33  Score=291.74  Aligned_cols=248  Identities=29%  Similarity=0.419  Sum_probs=199.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-----cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-----QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +...+.||+|++|.||+|...   .++..|++|.+....     .+..+++.+|+.++++++|+||+++++++..+...+
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNL---DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLY   78 (258)
T ss_pred             ccccceeeecCCceEEEEEEc---CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEE
Confidence            345688999999999999874   356789999886532     123457889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +|+||+++++|.+++.....+++..+..++.||++||+|||+   .+++|+||+|+||+++.++.+||+|||++......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~  155 (258)
T cd06632          79 IFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF  155 (258)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence            999999999999999877778999999999999999999995   49999999999999999999999999998876443


Q ss_pred             cccceeecccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .   ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||........  .    ...........+   
T Consensus       156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~--~----~~~~~~~~~~~~---  223 (258)
T cd06632         156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA--V----FKIGRSKELPPI---  223 (258)
T ss_pred             c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH--H----HHHHhcccCCCc---
Confidence            2   123455888999999987766 88999999999999999999999965432111  0    111010111110   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .....+.+.+++.+||+.+|.+||++.+++++
T Consensus       224 ------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         224 ------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             ------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence                  11235678899999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=6.9e-33  Score=296.83  Aligned_cols=245  Identities=28%  Similarity=0.388  Sum_probs=197.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      ..||+|+||.||++...   ..+..||||++........+.+.+|+.++++++|+||+++++.+..++..++||||++++
T Consensus        28 ~~lg~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          28 IKIGEGSTGIVCIATEK---HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hcccCCCCeEEEEEEEC---CCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            56999999999999764   356789999987654445567889999999999999999999999999999999999999


Q ss_pred             chhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecc
Q 045343          605 TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI  684 (813)
Q Consensus       605 sL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~  684 (813)
                      +|.+++.. ..+++..+..++.||+.||.|||+   .+|+||||||+||++++++.++|+|||++.........  ....
T Consensus       105 ~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~--~~~~  178 (292)
T cd06658         105 ALTDIVTH-TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKSL  178 (292)
T ss_pred             cHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc--Ccee
Confidence            99998854 457899999999999999999995   49999999999999999999999999998765432221  2234


Q ss_pred             cccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHH
Q 045343          685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKC  764 (813)
Q Consensus       685 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  764 (813)
                      .++..|+|||.+.+..++.++||||||+++|||++|+.||..........       ...     ....+....  ....
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-------~~~-----~~~~~~~~~--~~~~  244 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-------RIR-----DNLPPRVKD--SHKV  244 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHH-----hcCCCcccc--cccc
Confidence            58899999999988889999999999999999999999997543221110       000     001111111  1123


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          765 VEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       765 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...+.+++.+|++.||.+|||++|++++
T Consensus       245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         245 SSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            4567889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=9.4e-33  Score=294.59  Aligned_cols=262  Identities=24%  Similarity=0.329  Sum_probs=194.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|++|.||+|...   ..+..||||+++...  ....+.+.+|+.++++++|+||+++++++.++...++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNK---KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIF   78 (285)
T ss_pred             ceEeeEecccCceEEEEEEEC---CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence            456789999999999999874   356789999986432  222356888999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||++ ++|.+++...   ..+++..+..++.||++||.|||+   .+++|+||||+||+++.++.+||+|||++......
T Consensus        79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  154 (285)
T cd07861          79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP  154 (285)
T ss_pred             ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence            9997 6888887542   468899999999999999999995   59999999999999999999999999999765432


Q ss_pred             cccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHHHH----Hhhcc-C--
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDWAF----DCYRN-E--  746 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~----~~~~~-~--  746 (813)
                      ...  .....++..|+|||.+.+. .++.++||||||++++||++|+.||.......... ......    ..+.. .  
T Consensus       155 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         155 VRV--YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             ccc--ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence            211  2233568899999988654 57889999999999999999999997543321110 000000    00000 0  


Q ss_pred             -----cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 -----KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 -----~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           ........... ........++.+++.+||+.||.+|||+.+|+++
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         233 PDYKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHHHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                 00000000000 0011235677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.8e-33  Score=326.25  Aligned_cols=256  Identities=23%  Similarity=0.288  Sum_probs=197.1

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeec-
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-  590 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-  590 (813)
                      .+.....|.+.++||+|+||+||++...   ..+..+|+|.+...  .......+..|+.++++++|||||++++++.+ 
T Consensus         8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk---~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de   84 (1021)
T PTZ00266          8 GESRLNEYEVIKKIGNGRFGEVFLVKHK---RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK   84 (1021)
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEEC---CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence            3444456788899999999999999875   35678899988643  22234568899999999999999999998854 


Q ss_pred             -CCceEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcC----CCCeeeCCCCCCcEEEcC----
Q 045343          591 -GQNRLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDC----SAQIIHCDIKPQNILLDD----  657 (813)
Q Consensus       591 -~~~~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~----~~~ivH~dlk~~NIll~~----  657 (813)
                       ....+|||||+++++|.++|..    ...+++..++.|+.||+.||.|||...    ..+|+||||||+||||+.    
T Consensus        85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~  164 (1021)
T PTZ00266         85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH  164 (1021)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence             3468999999999999999864    256899999999999999999999642    146999999999999964    


Q ss_pred             -------------CCCEEEeeccCccccccCcccceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCc
Q 045343          658 -------------YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRK  722 (813)
Q Consensus       658 -------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~  722 (813)
                                   ...+||+|||++..+.....   .....||+.|+|||++.+  ..++.++|||||||+||||++|+.
T Consensus       165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~  241 (1021)
T PTZ00266        165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT  241 (1021)
T ss_pred             cccccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                         23489999999987643221   234568999999999854  458899999999999999999999


Q ss_pred             CCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       723 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ||........  +   . ..+...       +.+.   .......+.+|+..||+.+|.+||++.|+++
T Consensus       242 PF~~~~~~~q--l---i-~~lk~~-------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        242 PFHKANNFSQ--L---I-SELKRG-------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CCCcCCcHHH--H---H-HHHhcC-------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            9975432111  1   1 111110       0000   0123467889999999999999999999994

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.4e-33  Score=304.29  Aligned_cols=259  Identities=25%  Similarity=0.312  Sum_probs=191.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecC------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------  591 (813)
                      .|.+.+.||+|+||.||+|...   ..+..||||++.....  ...+++.+|+.++++++|+||+++++++...      
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          16 RYQNLTPVGSGAYGSVCSAYDT---RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhheecccCCCeEEEEEEEC---CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4666789999999999999874   3567899999864321  2234577899999999999999999987533      


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ...++++|++ +++|.+++.. ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~  167 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQ  167 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcccee
Confidence            3568999987 7788887753 468999999999999999999995   4999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHHH-------HHh
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDWA-------FDC  742 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~-------~~~  742 (813)
                      ....     .....||..|+|||++.+ ..++.++|||||||++|||++|+.||......... .+....       ...
T Consensus       168 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07878         168 ADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK  242 (343)
T ss_pred             cCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            5432     233568999999999877 46889999999999999999999999754321110 000000       000


Q ss_pred             hccCc-------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRNEK-------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...+.       +........... .....+.+.+++.+||+.||.+|||+.|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         243 ISSEHARKYIQSLPHMPQQDLKKI-FRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             cchhhHHHHhhccccccchhHHHh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000       000000000000 00123457899999999999999999999966

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=303.42  Aligned_cols=244  Identities=27%  Similarity=0.382  Sum_probs=199.5

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCc
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGT  605 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs  605 (813)
                      +||+|.||+||-|.+.   .....+|||.+........+-+.+||.+-++++|.|||+++|.+.++...-+.||.++|||
T Consensus       582 VLGKGTYG~VYA~RD~---~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDM---DTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccc---cceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            5999999999999774   3557799999876544455568899999999999999999999999999999999999999


Q ss_pred             hhhhhhcc-CCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCccccccCccccee
Q 045343          606 LASFLFGN-LKP--SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       606 L~~~l~~~-~~l--~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      |.++|... +++  ++.+.--+.+||++||.|||+.   .|||||||-.||||+ -.|.+||+|||-++++..-  ....
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~T  733 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCT  733 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC--Cccc
Confidence            99999765 444  7888888999999999999965   999999999999997 5689999999999887532  2235


Q ss_pred             ecccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                      ..+-||..|||||++..+  .|..++|||||||.+.||.||++||..........+        .-+..      ....+
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF--------kVGmy------KvHP~  799 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF--------KVGMY------KVHPP  799 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh--------hhcce------ecCCC
Confidence            567899999999999765  488999999999999999999999975443222211        11100      11122


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      .+.+...+...++++|+.+||.+||+++++++
T Consensus       800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            34466788899999999999999999999985

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-35  Score=286.03  Aligned_cols=247  Identities=24%  Similarity=0.325  Sum_probs=208.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      ..+.++||+|+||.|||+..   ++.+..+|||++.-  +.+.+++..|+.+|++.+.+++|+++|.+.....+++||||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH---~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIH---RESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHH---hccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            44568999999999999987   46889999999864  45678899999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |.-|+..+++.. ++++.+.++..++...++||+|||.   ..-+|||||+.||||+.+|.+||+|||.|..+.....+ 
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK-  185 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK-  185 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh-
Confidence            999999999975 4788999999999999999999995   47799999999999999999999999999877644332 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc-cccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV-EGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~  758 (813)
                       .....||+-|||||++..-.|+.++||||||+...||..|++|+..--+-               ..+.-+. .+.-..
T Consensus       186 -RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---------------RAIFMIPT~PPPTF  249 (502)
T KOG0574|consen  186 -RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---------------RAIFMIPTKPPPTF  249 (502)
T ss_pred             -hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---------------ceeEeccCCCCCCC
Confidence             34567999999999999999999999999999999999999998633211               1111111 111122


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+.+.+.++-++++.||.++|++|-|+.+++++
T Consensus       250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            2345678899999999999999999999988876

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=298.16  Aligned_cols=251  Identities=22%  Similarity=0.241  Sum_probs=198.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||+|++|.||++...   ..+..+|||.+......   ..+.+.+|++++.+++|+||+++++.+.+....++|
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLK---GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEc---CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence            456688999999999999875   25678999998753222   345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+.+++|.+++...  ..+++..+..++.|+++||+|||.   .+++|+||||+||+++.++.++|+|||++......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            9999999999998754  568899999999999999999995   59999999999999999999999999998765322


Q ss_pred             ccc---------------------------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCccc
Q 045343          676 QSK---------------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEM  728 (813)
Q Consensus       676 ~~~---------------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~  728 (813)
                      ...                           .......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            110                           00112357889999999998889999999999999999999999997543


Q ss_pred             chhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHH
Q 045343          729 GEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT----MKKVLQM  792 (813)
Q Consensus       729 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt----~~evl~~  792 (813)
                      .....  .    ..         .+..............+.+++.+||+.+|++||+    ++|++++
T Consensus       237 ~~~~~--~----~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         237 RDETF--S----NI---------LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             hHHHH--H----HH---------hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            32111  0    00         0111111111124678999999999999999999    7777764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.7e-32  Score=292.95  Aligned_cols=251  Identities=22%  Similarity=0.375  Sum_probs=198.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .+++.+.||+|+||.||++...   ..+..+|+|.++... .....++.+|+.++.+++|+||+++++.+......++|+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHR---PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM   78 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEc---CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence            3677899999999999999874   356789999886432 223457889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||+++++|..++...   ..+++..+..++.|++.||.|||+  ..+|+|+||||+||+++.++.+||+|||++......
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  156 (286)
T cd06622          79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS  156 (286)
T ss_pred             eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence            999999999988763   368999999999999999999995  248999999999999999999999999998765432


Q ss_pred             cccceeecccccccccCcccccCCC------CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNST------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~------~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      .    .....++..|+|||.+.+..      ++.++|+|||||++|||++|+.||...........   . .        
T Consensus       157 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---~-~--------  220 (286)
T cd06622         157 L----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ---L-S--------  220 (286)
T ss_pred             c----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH---H-H--------
Confidence            1    22345788999999985543      47899999999999999999999965332111100   0 0        


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+..... ..........+.+++.+||+.+|.+||++.+++++
T Consensus       221 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         221 AIVDGDP-PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHhhcCC-CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            0111000 00112356778899999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.1e-32  Score=296.05  Aligned_cols=245  Identities=25%  Similarity=0.362  Sum_probs=197.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      .+||+|+||.||++...   .++..|+||.+........+.+.+|+.++..++|+||+++++++..++..++|+||++++
T Consensus        27 ~~ig~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          27 IKIGEGSTGIVCIAREK---HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             hhcCCCCceeEEEEEEc---CCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            47999999999999874   356789999986544444567889999999999999999999999999999999999999


Q ss_pred             chhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecc
Q 045343          605 TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI  684 (813)
Q Consensus       605 sL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~  684 (813)
                      +|..++.. ..+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++.........  ....
T Consensus       104 ~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~--~~~~  177 (297)
T cd06659         104 ALTDIVSQ-TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSL  177 (297)
T ss_pred             CHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc--ccce
Confidence            99987754 467899999999999999999995   49999999999999999999999999998765433221  2335


Q ss_pred             cccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHH
Q 045343          685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKC  764 (813)
Q Consensus       685 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  764 (813)
                      .++..|+|||.+.+..++.++||||||++++||++|+.||......+...       .........     ..  .....
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~~-----~~--~~~~~  243 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-------RLRDSPPPK-----LK--NAHKI  243 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHhccCCCC-----cc--ccCCC
Confidence            68899999999998889999999999999999999999997543322110       001100000     00  01123


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          765 VEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       765 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...+.+++.+||+.+|.+||++.+++++
T Consensus       244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         244 SPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            4568899999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=2.2e-32  Score=288.13  Aligned_cols=252  Identities=27%  Similarity=0.386  Sum_probs=200.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |...+.||+|+||.||+|...   .++..+++|.++.....  ..+++.+|+.++++++|+||+++++++...+..++|+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNL---DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM   78 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEEC---CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE
Confidence            456789999999999999874   35678999998754332  4567899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..+..++.|+++||.|||+   .+++|+||+|+||++++++.+||+|||++.........
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence            999999999999887778999999999999999999995   49999999999999999999999999999876543221


Q ss_pred             ce--eecccccccccCcccccCCC---CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          679 AI--RTAIRGTKGYVAPEWFRNST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       679 ~~--~~~~~gt~~y~aPE~l~~~~---~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..  .....++..|+|||++....   .+.++||||||++++|+++|+.||.........     ..... ....     
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~-----~~~~~-~~~~-----  224 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI-----MFHVG-AGHK-----  224 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH-----HHHHh-cCCC-----
Confidence            10  11345788999999998766   888999999999999999999999643221110     00000 0000     


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      +...  ........+.+++.+||+.+|.+||++.|+++
T Consensus       225 ~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         225 PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0011  11123567789999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.4e-32  Score=289.52  Aligned_cols=251  Identities=26%  Similarity=0.375  Sum_probs=199.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeec--CCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~l  596 (813)
                      |++.+.||.|+||.||++...   ..+..+++|.+...  .....+++.+|++++++++|+||+++++++..  +...++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~   78 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRK---SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYI   78 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeec---CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEE
Confidence            456788999999999999874   35678999988642  22334568889999999999999999998754  445789


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDC--SAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      +|||+++++|.+++..    ...+++..++.++.||++||.|||..+  ..+++|+||||+||++++++.+||+|||++.
T Consensus        79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~  158 (265)
T cd08217          79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAK  158 (265)
T ss_pred             EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccc
Confidence            9999999999999865    357899999999999999999999443  4599999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ........  .....++..|+|||.+.+..++.++|+||||+++++|++|+.|+.....+.   +...    ........
T Consensus       159 ~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~----~~~~~~~~  229 (265)
T cd08217         159 ILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ---LASK----IKEGKFRR  229 (265)
T ss_pred             cccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH---HHHH----HhcCCCCC
Confidence            76543321  223468999999999998889999999999999999999999997543211   1111    11111111


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                               ........+.+++.+|++.+|.+||++.+|+++
T Consensus       230 ---------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         230 ---------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ---------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                     112345788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=9.4e-33  Score=294.50  Aligned_cols=261  Identities=21%  Similarity=0.282  Sum_probs=194.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.++||+|+||.||+|...   ..+..+++|+++...  ......+.+|+.++++++|+||+++++++.+....++|+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~---~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVF   78 (284)
T ss_pred             ceeEEEecccCCeEEEEEEEC---CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence            556789999999999999874   356789999986432  222346788999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++ +|.+++.. ...+++..++.++.||++||.|||+   .+|+|+||||+||+++.++.+||+|||+++.......
T Consensus        79 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          79 EYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             ecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence            99974 77777654 5678999999999999999999995   4999999999999999999999999999986543221


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC------cccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE------KLDD  750 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~------~~~~  750 (813)
                      .  .....++..|+|||.+.+. .++.++||||||+++|||++|+.|+........ .+ ..........      ....
T Consensus       155 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         155 C--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QL-KRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             C--cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH-HH-HHHHHHhCCCChHHhHHhhh
Confidence            1  2234578899999998765 468899999999999999999988643322111 00 0001000000      0000


Q ss_pred             cccc----ccc-----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 LVEG----DME-----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~----~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+.    ...     ........+.+.+++.+||+.||.+|||++|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0000    000     00111245678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.4e-32  Score=288.51  Aligned_cols=248  Identities=22%  Similarity=0.314  Sum_probs=199.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.+.||+|+||.+|++...   .+++.+++|++...  .....+++.+|+.++++++|+||+++++++.+.+..++|+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSK---EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVM   78 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEc---CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEE
Confidence            566789999999999999874   35678999998643  2233457889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++...  ..+++..+++++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence            999999999998654  357899999999999999999995   499999999999999999999999999998664332


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....++..|+|||++.+...+.++|+||||+++++|++|+.|+......+.      ...... +...       
T Consensus       156 ~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~------~~~~~~-~~~~-------  219 (256)
T cd08218         156 EL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL------VLKIIR-GSYP-------  219 (256)
T ss_pred             hh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH------HHHHhc-CCCC-------
Confidence            11  1234578899999999988899999999999999999999999875432211      111111 1000       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        .........+.+++.+||+.+|.+||++.+|+++
T Consensus       220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         220 --PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             --CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence              0112345678999999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=7.5e-33  Score=291.94  Aligned_cols=253  Identities=25%  Similarity=0.377  Sum_probs=201.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||+|++|.||++...   .++..+++|.+.... ....+++.+|++++++++|+||+++++.+..+...++|+|
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHR---PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEc---CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence            456788999999999999874   356789999987543 2344578899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..+..++.|++++|+|||.  ..+++|+||||+||++++++.++|+|||.+.........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  157 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK  157 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence            99999999999765 778899999999999999999995  159999999999999999999999999998766432211


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                          ...++..|+|||.+.+..++.++||||||+++++|++|+.||......... .........         ......
T Consensus       158 ----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~---------~~~~~~  223 (265)
T cd06605         158 ----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IFELLQYIV---------NEPPPR  223 (265)
T ss_pred             ----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-HHHHHHHHh---------cCCCCC
Confidence                156788999999999889999999999999999999999999654211110 001111111         100000


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .........+.+++..||..+|.+|||+.+++++
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            0111145678899999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.6e-32  Score=289.56  Aligned_cols=250  Identities=21%  Similarity=0.285  Sum_probs=194.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-----ccchhhhheeeeeeccccCCcceEEeEeecC--Cc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-----DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~  593 (813)
                      +.+.+.||+|+||.||+|...   .++..|+||.+.....     ...+.+.+|+.++++++|+||+++++++.+.  ..
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDA---DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEc---CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence            456789999999999999874   3567899998753211     1234678899999999999999999988664  45


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+++++|.+++.....+++....+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++...
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence            78999999999999999877778899999999999999999995   489999999999999999999999999998654


Q ss_pred             cCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........  .    .......      
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~----~~~~~~~------  225 (265)
T cd06652         158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--I----FKIATQP------  225 (265)
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--H----HHHhcCC------
Confidence            32111 112234588899999999888899999999999999999999999974422111  0    0110000      


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ............+.+++.+|+. +|.+||+++||+++
T Consensus       226 ---~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         226 ---TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             ---CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence               0011122345677888899985 89999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.2e-32  Score=288.94  Aligned_cols=254  Identities=26%  Similarity=0.393  Sum_probs=199.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc------ccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ------DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      +...+.||+|++|.||++...   .++..+|+|.++....      ...+++.+|++++++++|+||+++++++.+.+..
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDV---KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHF   78 (268)
T ss_pred             ccccceecCcCceEEEEEEEc---CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeE
Confidence            345578999999999999763   3567899998864321      1245688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~  673 (813)
                      ++|+||+++++|.+++.....+++..+..++.||+.||.|||+   .+++|+||+|+||+++.++ .+||+|||++....
T Consensus        79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630          79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            9999999999999999887788999999999999999999995   4999999999999998775 59999999998765


Q ss_pred             cCccc--ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          674 LNQSK--AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       674 ~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .....  .......++..|+|||.+.+..++.++||||+|+++++|++|+.||...........   .........    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~----  228 (268)
T cd06630         156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL---IFKIASATT----  228 (268)
T ss_pred             cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH---HHHHhccCC----
Confidence            43211  112234578899999999888899999999999999999999999864332111110   111000000    


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           ...........+.+++.+||+.+|.+||++.|++++
T Consensus       229 -----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         229 -----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             -----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence                 011122345778899999999999999999999853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.3e-32  Score=294.86  Aligned_cols=255  Identities=18%  Similarity=0.244  Sum_probs=199.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||+|+||.||++...   ..++.|+||.+....   ....+.+.+|+++++.++|+||+++++.+.+++..++|
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHK---ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV   79 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEEC---CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence            456789999999999999874   356789999886542   12234678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.|+++||.|||+   .+++|+||||+||+++.++.+||+|||+++.......
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence            9999999999999888888999999999999999999995   4999999999999999999999999999874211100


Q ss_pred             c-------------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          678 K-------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       678 ~-------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      .             .......++..|+|||.+....++.++|+||||+++|||++|+.||.....++.      .... .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~------~~~~-~  229 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL------FGQV-I  229 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHH-H
Confidence            0             001123578899999999888899999999999999999999999974432211      0010 0


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .+.   ...+..    ....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       230 ~~~---~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         230 SDD---IEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             hcc---cCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            000   000100    01235678899999999999999997666666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4e-32  Score=288.68  Aligned_cols=249  Identities=27%  Similarity=0.372  Sum_probs=199.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.++||+|+||.||+|...   ..+..+|||.+.... ....+.+.+|+.++.+++|+||+++++++..+...++|
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   80 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDN---RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   80 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEEC---CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEE
Confidence            34566788999999999999763   356789999876432 22335688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+++++|.+++.. ..+++..+..++.|++.++.|||+   .+++|+||+|+||+++.++.++|+|||++..+.....
T Consensus        81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence            999999999998864 457899999999999999999995   5999999999999999999999999999876643321


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .  .....++..|+|||.+.+...+.++|+||||+++++|++|..|+.........       ........     +.  
T Consensus       157 ~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~~~~-----~~--  220 (277)
T cd06641         157 K--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL-------FLIPKNNP-----PT--  220 (277)
T ss_pred             h--hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH-------HHHhcCCC-----CC--
Confidence            1  22345788999999998888899999999999999999999998643321110       00011000     00  


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ........+.+++.+||+.+|.+||++.+++++
T Consensus       221 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         221 --LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             --CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence              111335678899999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.4e-32  Score=291.73  Aligned_cols=251  Identities=27%  Similarity=0.363  Sum_probs=193.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEee-----cCCc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCD-----EGQN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-----~~~~  593 (813)
                      ++++.+.||+|+||.||++...   ..+..+++|.++.. .....++.+|+.++.++ +|+||+++++++.     .+..
T Consensus        19 ~~~~~~~lg~g~~~~vy~~~~~---~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          19 TWEIIETIGKGTYGKVFKVLNK---KNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             ceeeeeeeccCCCcEEEEEEEC---CCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            4566789999999999999874   35678999987642 22345688899999999 6999999999884     3456


Q ss_pred             eEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      .++||||+++++|.+++..    ...+++..+..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~  171 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVS  171 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCce
Confidence            8999999999999998753    3467888999999999999999995   59999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      +........  .....|+..|+|||.+..     ..++.++|||||||++|||++|+.|+........  +.    . ..
T Consensus       172 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~----~-~~  242 (286)
T cd06638         172 AQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LF----K-IP  242 (286)
T ss_pred             eecccCCCc--cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hh----h-cc
Confidence            876432211  233468999999998853     4478899999999999999999999865432111  00    0 00


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .........       .......+.+++.+||+.+|++|||+.||++++
T Consensus       243 ~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         243 RNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             ccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            000000111       111345788999999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.1e-32  Score=285.90  Aligned_cols=252  Identities=26%  Similarity=0.344  Sum_probs=205.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||+|++|.||++...   ..+..++||++..... ...+++.+|+.++.+++|+||+++++++......++|+|
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~---~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHK---PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEc---CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            456789999999999999885   3577899999875433 345678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.....+++..++.++.|+++||+|||+  ..+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~--~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~-  156 (264)
T cd06623          80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ-  156 (264)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhc--cCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence            99999999999887888999999999999999999994  159999999999999999999999999999876543322 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....++..|+|||.+.+..++.++|+||||+++|||++|+.|+..........+....   . ......         
T Consensus       157 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~---~-~~~~~~---------  222 (264)
T cd06623         157 -CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI---C-DGPPPS---------  222 (264)
T ss_pred             -ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH---h-cCCCCC---------
Confidence             12345788999999999888999999999999999999999999755321111111111   1 110000         


Q ss_pred             ccHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIK-CVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .... .+..+.+++.+||+.+|++||++.|++++
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         223 LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            1112 46789999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=2.8e-32  Score=289.70  Aligned_cols=248  Identities=25%  Similarity=0.390  Sum_probs=197.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccc---cCCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~l  596 (813)
                      |++.+.||+|+||.||+|...   .++..++||.+.... ....+++.+|+.++++++   |+|++++++++.++...++
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHV---PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhheeccCCceEEEEEEc---CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            456788999999999999874   356789999886432 233456888999998886   9999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++... .+++...+.++.|+++||.|||+   .+|+|+||+|+||++++++.++|+|||++.......
T Consensus        80 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS  155 (277)
T ss_pred             EEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence            99999999999998654 68899999999999999999995   499999999999999999999999999998765443


Q ss_pred             ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..  .....|+..|+|||.+.+. .++.++||||||+++|+|++|+.||.........       ......     ..+.
T Consensus       156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-------~~~~~~-----~~~~  221 (277)
T cd06917         156 SK--RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-------MLIPKS-----KPPR  221 (277)
T ss_pred             cc--cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-------hccccC-----CCCC
Confidence            21  2334688899999988654 4688999999999999999999999754321110       000000     0111


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.   .......+.+++.+||+.||.+||++.|++++
T Consensus       222 ~~---~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         222 LE---DNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             CC---cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            11   11135678899999999999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.98  E-value=2.8e-32  Score=292.37  Aligned_cols=251  Identities=26%  Similarity=0.360  Sum_probs=201.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.+.||+|+||.||++...   .++..+++|.+........+.+.+|+.++++++|+||+++++++...+..++|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDV---ATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEc---CCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            45667789999999999999764   356789999986544444567889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++... .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.........
T Consensus        96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647          96 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             ecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence            999999999998654 57889999999999999999995   49999999999999999999999999998765443221


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                        .....++..|+|||.+....++.++||||||+++||+++|+.||..........      ....        .+....
T Consensus       172 --~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~--------~~~~~~  235 (293)
T cd06647         172 --RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIAT--------NGTPEL  235 (293)
T ss_pred             --cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhc--------CCCCCC
Confidence              223458889999999988889999999999999999999999997543221100      0000        000000


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .........+.+++.+||+.+|.+||++.+++.+
T Consensus       236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111234678899999999999999999999977

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.98  E-value=3.3e-32  Score=290.48  Aligned_cols=261  Identities=21%  Similarity=0.288  Sum_probs=199.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.+.||+|++|.||+|...   .++..|+||++....  ....+.+.+|+.++++++|+||+++++++..+...++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   78 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDR---ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVM   78 (286)
T ss_pred             ceEEeecccCCCcEEEEEEEC---CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence            567789999999999999874   356789999987543  223457889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+ +++|.+++.. ...+++..++.++.||+++|+|||+   .+++|+||||+||+++.++.++|+|||++........
T Consensus        79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            999 9999999864 4568999999999999999999995   4999999999999999999999999999987654322


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC----------
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE----------  746 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----------  746 (813)
                      .. .....++..|+|||.+.+. .++.++||||+|++++||++|.++|......+..   ......+...          
T Consensus       155 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         155 RL-YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQL---AIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             Cc-cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHH---HHHHHHcCCCChHHHhhccC
Confidence            11 2234688999999998654 4688999999999999999998877654332111   1111111000          


Q ss_pred             --ccccccccccc----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 --KLDDLVEGDME----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 --~~~~~~~~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ....+..+...    .....+....+.+++.+||+.+|++||++++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence              00000000000    00001235788999999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.98  E-value=3.7e-32  Score=284.98  Aligned_cols=247  Identities=25%  Similarity=0.365  Sum_probs=198.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.+.||+|++|.||++...   ..+..++||.+...  .....+.+.+|++++++++|+||+++++.+..++..++|+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRK---ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVM   78 (256)
T ss_pred             ceEEEEecccCceEEEEEEEc---CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEE
Confidence            567789999999999999874   35678999988643  2233457889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGla~~~~~~  675 (813)
                      ||+++++|.+++...  ..+++..+.+++.+++++|.|||+   .+++|+||||+||+++++ ..+||+|||++......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            999999999999764  457899999999999999999995   499999999999999855 46899999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....++..|+|||.+.+...+.++||||||+++++|++|+.||........      ...... .....+    
T Consensus       156 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~------~~~~~~-~~~~~~----  221 (256)
T cd08220         156 SK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL------VLKIMS-GTFAPI----  221 (256)
T ss_pred             cc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH------HHHHHh-cCCCCC----
Confidence            22   2234578899999999988889999999999999999999999875432211      111110 001111    


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .......+.+++.+||+.+|.+|||+.|++++
T Consensus       222 -----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         222 -----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             -----CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                 11235678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.98  E-value=4.8e-32  Score=289.32  Aligned_cols=246  Identities=26%  Similarity=0.371  Sum_probs=198.2

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      .+.||+|++|.||++...   ..+..+++|+++.......+.+.+|+.++++++|+||+++++++...+..++|+||+++
T Consensus        24 ~~~lg~g~~g~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          24 FVKIGEGSTGIVCIATDK---STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             ceEeccCCCeEEEEEEEC---CCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            468999999999999864   35678999998755444456688999999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeec
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      ++|.+++.. ..+++..+..++.|++.||+|||+   .+++||||+|+||+++.++.++|+|||++.........  ...
T Consensus       101 ~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~--~~~  174 (285)
T cd06648         101 GALTDIVTH-TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR--RKS  174 (285)
T ss_pred             CCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc--ccc
Confidence            999999877 568899999999999999999995   49999999999999999999999999988765432211  223


Q ss_pred             ccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHH
Q 045343          684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK  763 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (813)
                      ..|+..|+|||.+.+..++.++||||||++++||++|+.||.........       ........     +...  ....
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~-------~~~~~~~~-----~~~~--~~~~  240 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM-------KRIRDNLP-----PKLK--NLHK  240 (285)
T ss_pred             ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH-------HHHHhcCC-----CCCc--cccc
Confidence            45889999999998888999999999999999999999998654321110       00111100     0111  0112


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          764 CVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       764 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....+.+++.+||+.+|++||++.+++++
T Consensus       241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         241 VSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            35678999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.4e-33  Score=299.52  Aligned_cols=241  Identities=26%  Similarity=0.349  Sum_probs=197.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      ++||+|+||-||-+...   .+...||||++.-.   ......++..|+..|.+++|||+|.+.|++..+...|||||||
T Consensus        32 rEIGHGSFGAVYfArd~---~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC  108 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC  108 (948)
T ss_pred             HHhcCCccceeEEeecc---CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence            57999999999999875   36678999998632   2222346889999999999999999999999999999999999


Q ss_pred             CCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          602 NNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       602 ~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      -| |-.|++. ..+++.+-.+..|..+.+.||+|||   +.+.||||||+.||||++.|.|||+|||.|....+.     
T Consensus       109 lG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-----  179 (948)
T KOG0577|consen  109 LG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-----  179 (948)
T ss_pred             hc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCch-----
Confidence            55 6667664 4567888899999999999999999   559999999999999999999999999999887653     


Q ss_pred             eecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                       ..++||+.|||||+|.   .+.|+-|+||||||+...||...++|.-......               .+-.+......
T Consensus       180 -nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS---------------ALYHIAQNesP  243 (948)
T KOG0577|consen  180 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------------ALYHIAQNESP  243 (948)
T ss_pred             -hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH---------------HHHHHHhcCCC
Confidence             3467999999999884   4679999999999999999999999875322111               01112222223


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .....+.+..++.++..||++-|.+|||..+++++-
T Consensus       244 tLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  244 TLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             CCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence            334568899999999999999999999999998874

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.98  E-value=5.1e-32  Score=290.02  Aligned_cols=262  Identities=21%  Similarity=0.290  Sum_probs=192.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.+.||+|+||.||+|...   .++..+++|.+..... .....+.+|+.+++.++|+||+++.+++..++..++|+
T Consensus         6 ~y~~~~~ig~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           6 SYLNLEKLGEGSYATVYKGISR---INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             eeEEEEEEEecCCEEEEEEEEc---CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            3556789999999999999874   3467899999865432 22345788999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+. ++|.+++.. ...+++..+..++.||+.||.|||+   .+|+|+||||+||+++.++.+||+|||+++.......
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  158 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ  158 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence            9996 566666543 4567888889999999999999995   4999999999999999999999999999976433211


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---C------c
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---E------K  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~------~  747 (813)
                      .  .....++..|+|||++.+. .++.++||||||+++|||++|+.||+........ +.+ .+.....   .      .
T Consensus       159 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~  234 (291)
T cd07870         159 T--YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ-LEK-IWTVLGVPTEDTWPGVSK  234 (291)
T ss_pred             C--CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHH-HHH-HHHHcCCCChhhhhhhhh
Confidence            1  1233468899999998764 5788999999999999999999999754432111 111 1110000   0      0


Q ss_pred             c----cccc----cccccc-cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 L----DDLV----EGDMEA-LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~----~~~~----~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .    ....    ...... .........+.+++.+|++.||.+|||++|++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            0    0000    000000 0011124677899999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.98  E-value=4.1e-32  Score=286.43  Aligned_cols=254  Identities=27%  Similarity=0.406  Sum_probs=201.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.+.||.|+||+||+|...   .++..+++|++.... ....+.+.+|+++++.++|+||+++++.+..++..++|+|
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           3 YELIEVIGVGATAVVYAAICL---PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             ceeeeeecCCCCeEEEEEEEc---CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            567789999999999999864   256789999986432 2245678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ++++++|.+++...   ..+++.....++.|++.||+|||+   .+++|+||+|+||++++++.++|+|||++..+....
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG  156 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence            99999999999753   458899999999999999999995   599999999999999999999999999998765433


Q ss_pred             cc--ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          677 SK--AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       677 ~~--~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..  .......++..|+|||.+... ..+.++|+||||++++||++|+.||........  +.    ..... .     .
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~----~~~~~-~-----~  224 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LM----LTLQN-D-----P  224 (267)
T ss_pred             cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HH----HHhcC-C-----C
Confidence            22  112334688999999998877 788999999999999999999999975433210  10    11110 0     0


Q ss_pred             ccccccc-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALN-DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +...... .......+.+++.+||+.||++||++.+|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         225 PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0011000 12345778899999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.98  E-value=3e-32  Score=291.69  Aligned_cols=244  Identities=25%  Similarity=0.269  Sum_probs=199.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |.+.+.||+|+||.||++....   .++.+|+|.++...   ....+.+.+|++++++++|+||+++++++.++...++|
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEcC---CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence            5677899999999999998753   56789999986432   12345688899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.||++||.|||+   .+++|+||+|+||+++.++.+||+|||+++.....  
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--  154 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--  154 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence            9999999999999888889999999999999999999995   59999999999999999999999999999876543  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||.........       ......        ...
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~--------~~~  216 (290)
T cd05580         155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY-------EKILEG--------KVR  216 (290)
T ss_pred             ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHhcC--------Ccc
Confidence               22345889999999998888899999999999999999999999754321100       000010        000


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .  .......+.+++.+||+.||.+|+     +++|++++
T Consensus       217 ~--~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         217 F--PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             C--CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            0  112256788999999999999999     77777744

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.98  E-value=2.6e-32  Score=290.78  Aligned_cols=250  Identities=26%  Similarity=0.366  Sum_probs=193.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeec------C
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE------G  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~------~  591 (813)
                      ..+++.+.||+|+||.||+|...   ..+..+|+|.+.... ....++..|+.++.++ +|+||+++++++..      .
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   91 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHV---KTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD   91 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEc---CCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence            34566789999999999999874   356789999886532 2345688899999988 69999999999853      4


Q ss_pred             CceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +..+++|||+++|+|.+++...  ..+++..+..++.||++||.|||+   .+|+|+||||+||++++++.++|+|||++
T Consensus        92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~~  168 (282)
T cd06636          92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVS  168 (282)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcch
Confidence            5689999999999999998653  457888889999999999999995   49999999999999999999999999998


Q ss_pred             cccccCcccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      .........  .....|+..|+|||.+.     ...++.++||||||+++|||++|+.||..........      ..  
T Consensus       169 ~~~~~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~------~~--  238 (282)
T cd06636         169 AQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF------LI--  238 (282)
T ss_pred             hhhhccccC--CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh------hH--
Confidence            765432211  23356889999999885     3457889999999999999999999996433211100      00  


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .......   ......+..+.+++.+||+.||.+||++.|++++
T Consensus       239 ----~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         239 ----PRNPPPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             ----hhCCCCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence                0000000   1111345678999999999999999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.98  E-value=7.5e-32  Score=286.89  Aligned_cols=243  Identities=25%  Similarity=0.285  Sum_probs=188.1

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeee---eeccccCCcceEEeEeecCCceEEEEe
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVV---IGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~---l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .||+|+||.||++...   .++..+|||.+.....   .....+.+|..+   +...+|+||+.+++++..++..++|||
T Consensus         1 ~lg~G~~g~Vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEEC---CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence            4899999999999874   3577899998864321   112223444433   333479999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.....+++..+..++.|++.||.|||.   .+|+|+||||+|||++.++.++|+|||++.......   
T Consensus        78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---  151 (279)
T cd05633          78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---  151 (279)
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence            99999999999888889999999999999999999995   599999999999999999999999999987554321   


Q ss_pred             eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                       .....|+..|+|||.+.+ ..++.++||||||++++||++|+.||..........+...    ..      .....   
T Consensus       152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~----~~------~~~~~---  217 (279)
T cd05633         152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM----TL------TVNVE---  217 (279)
T ss_pred             -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH----hh------cCCcC---
Confidence             223458999999998864 5678999999999999999999999975433221111110    00      00001   


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                       ........+.+++..||+.||.+||     +++|++++
T Consensus       218 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         218 -LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             -CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence             1122456788999999999999999     69999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=8.3e-32  Score=287.80  Aligned_cols=255  Identities=26%  Similarity=0.327  Sum_probs=197.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecC--CceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV  597 (813)
                      +++.++||.|++|.||++...   ..+..+|+|.+..... ....++.+|++++++++|+||+++++++.+.  ...++|
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLK---NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             eEEEEEeccCCceEEEEEEEC---CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            345688999999999999985   3567899999874322 3346789999999999999999999988543  468999


Q ss_pred             EeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          598 YEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||+++++|.+++..    ...+++..+..++.||+.||.|||+   .+++|+||+|+||+++.++.++|+|||++....
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            999999999988753    3457889999999999999999995   499999999999999999999999999987654


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch--hhhhhHHHHHHhhccCccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE--EYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~--~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ...    .....++..|+|||.+.+..++.++||||||+++|||++|+.||.....+  ....+..+...    .....+
T Consensus       157 ~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~  228 (287)
T cd06621         157 NSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPEL  228 (287)
T ss_pred             ccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhh
Confidence            322    12345788999999999889999999999999999999999999765321  11111111111    000111


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+.   ........+.+.+++.+||+.+|.+|||+.||+++
T Consensus       229 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         229 KDE---PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             ccC---CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            000   01112346788999999999999999999999974

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.98  E-value=6.2e-32  Score=291.73  Aligned_cols=246  Identities=26%  Similarity=0.323  Sum_probs=193.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||+|...   ..+..|++|++.....   ...+++.+|+++++.++|+||+++.+++.+++..++
T Consensus        16 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          16 LFTDLREIGHGSFGAVYFARDV---RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhheeecCCCCeEEEEEEEc---CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            3666788999999999999874   3567899998864322   223468899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||+. |+|.+++. ....+++..+..++.|++.||.|||.   .+|+|+||+|+||++++++.++|+|||++......
T Consensus        93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607          93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence            999997 56666654 34568999999999999999999995   59999999999999999999999999998765432


Q ss_pred             cccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                            ....++..|+|||.+.   ...++.++||||||+++|||++|+.|+........      ....... ..    
T Consensus       169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~~~~~~~-~~----  231 (307)
T cd06607         169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYHIAQN-DS----  231 (307)
T ss_pred             ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------HHHHhcC-CC----
Confidence                  2345788999999874   35678899999999999999999999864432111      0010000 00    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                          .........+.+.+++.+||+.+|++||++.+|+++.
T Consensus       232 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         232 ----PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             ----CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence                0011123467789999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.98  E-value=1.1e-31  Score=291.00  Aligned_cols=252  Identities=25%  Similarity=0.310  Sum_probs=196.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+...+.||+|+||.||++...   .++..+|+|++.....   ...+++.+|++++++++|+|++++++++.+++..++
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l  102 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDV---RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWL  102 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEc---CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEE
Confidence            3556688999999999999874   3567899999864322   223468889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||+.+ +|.+++.. ...+++..+..++.|++.||.|||+   .+|+|+||+|+||+++.++.+||+|||++......
T Consensus       103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (317)
T cd06635         103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA  178 (317)
T ss_pred             EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence            9999975 67676643 4668999999999999999999995   49999999999999999999999999998754422


Q ss_pred             cccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                            ....++..|+|||++.   ...++.++||||||+++|||++|+.||.........      ....... .    
T Consensus       179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~~~-~----  241 (317)
T cd06635         179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNE-S----  241 (317)
T ss_pred             ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH------HHHHhcc-C----
Confidence                  2345788999999974   456888999999999999999999998654321110      0010100 0    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                          ...........+.+++.+||+.+|.+||++.+|++++......
T Consensus       242 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  284 (317)
T cd06635         242 ----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER  284 (317)
T ss_pred             ----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence                0011123456789999999999999999999999987654433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.98  E-value=5.8e-32  Score=289.55  Aligned_cols=262  Identities=21%  Similarity=0.324  Sum_probs=193.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .+++.+.||+|++|.||+|...   .++..||||.+...... ....+.+|++++++++|+||+++++++.+++..++||
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSK---LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF   82 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEc---CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence            4567789999999999999874   35678999998653222 2345678999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++ +|.+++... ..+++.....++.|+++||.|||+   .+|+|+||||+||+++.++.+||+|||+++.......
T Consensus        83 e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          83 EYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            99985 898888653 467899999999999999999995   4999999999999999999999999999875432211


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cccccc--
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDDL--  751 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~--  751 (813)
                      .  .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... + .........   +.....  
T Consensus       159 ~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~  234 (291)
T cd07844         159 T--YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ-L-HKIFRVLGTPTEETWPGVSS  234 (291)
T ss_pred             c--ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH-H-HHHHHhcCCCChhhhhhhhh
Confidence            1  122346788999998865 45788999999999999999999999654321110 0 101111000   000000  


Q ss_pred             -----------c-cccccc-cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 -----------V-EGDMEA-LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 -----------~-~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                 . ...+.. .........+.+++.+||+.+|.+|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence                       0 000000 0011113677899999999999999999998863

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.98  E-value=5.1e-32  Score=288.96  Aligned_cols=260  Identities=24%  Similarity=0.290  Sum_probs=197.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC--CceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV  597 (813)
                      ++.++||+|++|.||+|...   ..+..+++|++....  ......+.+|++++++++|+|++++++++...  ...++|
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~---~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNK---KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             eeeEEeccCCCeEEEEEEEC---CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence            46788999999999999874   346789999997653  22335688899999999999999999999887  789999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +||+++ +|.+++... ..+++..++.++.||++||+|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            999975 888888665 578999999999999999999995   499999999999999999999999999998765443


Q ss_pred             ccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc---cCccc---
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR---NEKLD---  749 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~---  749 (813)
                      ... .....++..|+|||.+.+ ..++.++||||||++++||++|+.||..........   .......   .....   
T Consensus       155 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         155 SAD-YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE---KIFELCGSPTDENWPGVS  230 (287)
T ss_pred             ccc-ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCchhhccccc
Confidence            211 223356788999998765 457899999999999999999999997654322111   1111100   00000   


Q ss_pred             cc-----------ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DL-----------VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~-----------~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+           ....+.......++..+.+++.+||+.+|.+||++.+++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            00           00000000011126788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=7.9e-33  Score=274.88  Aligned_cols=269  Identities=23%  Similarity=0.314  Sum_probs=208.6

Q ss_pred             CCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEe
Q 045343          510 CFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFC  588 (813)
Q Consensus       510 ~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~  588 (813)
                      .-+++|+.+-|.   +.||+|+++.|-.++..   ..+..+|||++.+.......+..+|++++.+.+ |+||++|+++|
T Consensus        72 ~g~F~d~YkLt~---e~LGeGAyasVqtcv~i---~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF  145 (463)
T KOG0607|consen   72 SGKFEDMYKLTS---ELLGEGAYASVQTCVSI---QTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF  145 (463)
T ss_pred             cchHHHHHHhHH---HHhcCccceeeeeeeee---ccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence            345666666654   67999999999888764   367889999999887777888999999999985 99999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEee
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISD  665 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~D  665 (813)
                      +++...|||||-|.+|+|..+|+.+..+++.+..++.++||.||.+||   .++|.||||||+|||......   +||+|
T Consensus       146 Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCD  222 (463)
T KOG0607|consen  146 EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICD  222 (463)
T ss_pred             cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeec
Confidence            999999999999999999999999999999999999999999999999   569999999999999975543   89999


Q ss_pred             ccCccccccCcc-----cceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh--
Q 045343          666 FGLAKLLTLNQS-----KAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA--  733 (813)
Q Consensus       666 fGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~--  733 (813)
                      |.+..-......     .......+|+..|||||+..     ...|+.+.|.||||||||-||+|.+||.+..+++-.  
T Consensus       223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd  302 (463)
T KOG0607|consen  223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD  302 (463)
T ss_pred             cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence            998765432211     11123457899999999773     345889999999999999999999999876553210  


Q ss_pred             --hhHHHHHHhhccCcccccccccccccc--cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          734 --ILTDWAFDCYRNEKLDDLVEGDMEALN--DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       734 --~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                        .........    ..+.+-++..+.+.  -...+.+..+++...+..++.+|.++..+++
T Consensus       303 rGe~Cr~CQ~~----LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  303 RGEVCRVCQNK----LFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             CCCccHHHHHH----HHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence              000111110    11111112221111  1245677788999999999999999999987

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.98  E-value=7.6e-32  Score=287.88  Aligned_cols=249  Identities=27%  Similarity=0.411  Sum_probs=201.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +++.+.||+|++|.||+|....   .+..+++|+++.... ..+.+.+|++++++++|+|++++++.+......++|+||
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDRA---TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEcc---CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            4556789999999999998752   467899999875433 456788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++++|.+++.... .+++..+..++.|++.||.|||.   .+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-  172 (286)
T cd06614          97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK-  172 (286)
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh-
Confidence            99999999998776 88999999999999999999995   59999999999999999999999999998765432211 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....++..|++||.+.+..++.++||||||+++|+|++|+.|+..........      .. .........       
T Consensus       173 -~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~------~~-~~~~~~~~~-------  237 (286)
T cd06614         173 -RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF------LI-TTKGIPPLK-------  237 (286)
T ss_pred             -hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH------HH-HhcCCCCCc-------
Confidence             223457889999999988889999999999999999999999987543321110      00 000011100       


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+.+++.+||+.+|.+||++.+|+++
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             chhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            011235678899999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.98  E-value=1e-31  Score=287.70  Aligned_cols=249  Identities=26%  Similarity=0.364  Sum_probs=192.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecC-----Cce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG-----QNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-----~~~  594 (813)
                      +.+.+.||+|+||.||++...   .+++.+|+|.+.... ....++.+|+.++.++ +|+|++++++++...     ...
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~---~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNK---KDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEEC---CCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            556688999999999999874   356789999886432 2345677889999988 799999999998653     358


Q ss_pred             EEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          595 LLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ++|+||+++++|.+++..    ...+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++
T Consensus       100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~~  176 (291)
T cd06639         100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSA  176 (291)
T ss_pred             EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence            999999999999998853    3568899999999999999999995   499999999999999999999999999988


Q ss_pred             ccccCcccceeecccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ........  .....++..|+|||.+...     .++.++|||||||++|||++|+.||........  +.    .. ..
T Consensus       177 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~----~~-~~  247 (291)
T cd06639         177 QLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LF----KI-PR  247 (291)
T ss_pred             hccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HH----HH-hc
Confidence            65432211  2234578899999988643     367899999999999999999999875432111  10    11 00


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....+.+       ..+....+.+++.+||+.+|++||++.|++++
T Consensus       248 ~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         248 NPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             CCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            11111111       11234578999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.3e-32  Score=287.48  Aligned_cols=251  Identities=26%  Similarity=0.369  Sum_probs=196.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCC-----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-----  592 (813)
                      ..+++.+.||+|++|.||+|...   ..+..+++|.++... ...+++.+|+.+++++ +|+||+++++++....     
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~---~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHK---KTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEEC---CCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            45667899999999999999874   346789999887543 2346789999999999 6999999999996644     


Q ss_pred             -ceEEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          593 -NRLLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                       ..++||||+++++|.+++..    ...+++..+..++.|+++||.|||+   .+++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence             48999999999999998864    3578899999999999999999995   599999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      ++.........  .....++..|+|||.+..     ..++.++||||||+++++|++|+.||........  +.    ..
T Consensus       159 ~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~----~~  230 (275)
T cd06608         159 VSAQLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LF----KI  230 (275)
T ss_pred             cceecccchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HH----Hh
Confidence            98765433221  233458889999998753     3467889999999999999999999964322111  10    10


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      . ......     .  .......+.+.+++.+||..||++|||+.+++++
T Consensus       231 ~-~~~~~~-----~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         231 P-RNPPPT-----L--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             h-ccCCCC-----C--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            0 000001     1  1112346788999999999999999999999863

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.98  E-value=5.7e-32  Score=288.43  Aligned_cols=259  Identities=24%  Similarity=0.333  Sum_probs=193.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ++..+.||.|++|.||+|...   ..+..|+||+++...  ......+.+|++++++++|+||+++++++.+++..++||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   78 (284)
T ss_pred             ceeeeeecCCCceEEEEEEEC---CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence            456688999999999999874   356789999886432  222356889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+. ++|.+++..  ...+++..++.++.|+++||+|||+   .+++|+||+|+||+++.++.+||+|||++.......
T Consensus        79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence            9996 688888854  3567899999999999999999995   499999999999999999999999999987654322


Q ss_pred             ccceeecccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC---------
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE---------  746 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---------  746 (813)
                      ..  .....++..|+|||.+.+.. ++.++||||||+++|||+||+.||........  +.... ......         
T Consensus       155 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~  229 (284)
T cd07860         155 RT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIF-RTLGTPDEVVWPGVT  229 (284)
T ss_pred             cc--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHhCCCChhhhhhhh
Confidence            11  12234678999999887654 58899999999999999999999975433211  11100 000000         


Q ss_pred             -------cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 -------KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 -------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                             ............. .......+.+++.+||+.||.+|||+++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         230 SLPDYKPSFPKWARQDFSKV-VPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHHHHhhcccccccCHHHH-cccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                   0000000000000 01224567899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.98  E-value=1e-31  Score=288.01  Aligned_cols=264  Identities=19%  Similarity=0.233  Sum_probs=195.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecC--CceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~  595 (813)
                      .+++.+.||+|+||.||+|...   .+++.++||.++.....  ....+.+|+.++.+++|+||+++++++...  ...+
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDK---KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEEC---CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            4667789999999999999874   35678999998643221  223567899999999999999999998777  7899


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+.+ +|.+++... ..+++..++.++.||++||+|||+   .+++|+||||+||+++.++.+||+|||++.....
T Consensus        83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            99999974 898888654 458999999999999999999995   4999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHHH-------HHhh--
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDWA-------FDCY--  743 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~-------~~~~--  743 (813)
                      ....  .....++..|+|||.+.+. ..+.++|+||||++++||++|+.||......... .+....       +..+  
T Consensus       159 ~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (293)
T cd07843         159 PLKP--YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE  236 (293)
T ss_pred             Cccc--cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence            3211  2234578899999998754 4688999999999999999999999754432111 000000       0000  


Q ss_pred             -cc---CcccccccccccccccH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 -RN---EKLDDLVEGDMEALNDI-KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 -~~---~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ..   ..........+...... ...+.+.+++..||+.+|++|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence             00   00000000001000111 135678899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=4.8e-32  Score=288.82  Aligned_cols=249  Identities=24%  Similarity=0.367  Sum_probs=189.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeee-eeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVV-IGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +++.+.||+|+||.||++...   .++..||||+++.... ....++..|+.+ ++.++|+||+++++++..+...++|+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHV---PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEc---CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            456789999999999999874   4578999999875422 223445556654 55668999999999999999999999


Q ss_pred             eecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||++ ++|.+++..    ...+++..++.++.||+.||+|||+  ..+++||||||+||+++.++.+||+|||+++....
T Consensus        80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            9997 678777643    3467899999999999999999995  23899999999999999999999999999986543


Q ss_pred             CcccceeecccccccccCcccccC----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ...   .....++..|+|||.+.+    ..++.++|+||||+++|||++|+.||....... ..+.    .... .....
T Consensus       157 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~----~~~~-~~~~~  227 (283)
T cd06617         157 SVA---KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQLK----QVVE-EPSPQ  227 (283)
T ss_pred             ccc---cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHHH----HHHh-cCCCC
Confidence            211   223457889999998865    446889999999999999999999986422111 0110    0000 00000


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +        .....++.+.+++.+||+.+|.+||++.+++++
T Consensus       228 ~--------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         228 L--------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             C--------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0        011235678999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-32  Score=317.65  Aligned_cols=264  Identities=26%  Similarity=0.405  Sum_probs=209.6

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCc----ceEEEEEEeeccccc-cchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTS----TTAVAVKKLDRVFQD-GEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~----~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      |+....-.+.+.||+|.||.|++|........    ...||||.++..... ..+.+..|+++|+.+ +|+||+.++|+|
T Consensus       292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~  371 (609)
T KOG0200|consen  292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC  371 (609)
T ss_pred             eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence            34444445667999999999999987644433    578999999865433 456799999999998 699999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      .+....++|.||+..|+|.++|....                .++....+.++.|||.|++||++   .+++||||.++|
T Consensus       372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRN  448 (609)
T KOG0200|consen  372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARN  448 (609)
T ss_pred             ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhh
Confidence            99999999999999999999997654                37788899999999999999994   589999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecc-cccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccch
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAI-RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGE  730 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~  730 (813)
                      ||+..+..+||+|||+|+.............. .-...|||||.+....++.|+|||||||+||||+| |..|+......
T Consensus       449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~  528 (609)
T KOG0200|consen  449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT  528 (609)
T ss_pred             EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence            99999999999999999976544333211111 12456999999999999999999999999999999 88888642111


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      +  .+    .+.+.         ...+...+..+.+++.++|+.||+.+|++||++.++++.++..
T Consensus       529 ~--~l----~~~l~---------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  529 E--EL----LEFLK---------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             H--HH----HHHHh---------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            1  11    11112         2222233445678999999999999999999999999999873

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=1.3e-31  Score=279.45  Aligned_cols=249  Identities=25%  Similarity=0.392  Sum_probs=202.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +...+.||+|++|.||++...   .++..+++|++........+++.+|++++++++|+|++++++++..+...++++||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHK---RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             ceeeeeeccCCceEEEEEEEC---CCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            345688999999999999874   25678999999765444567799999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++++|.+++... ..+++..+..++.|++++|.|||+   .+++|+||+|+||++++++.++|+|||.+........  
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--  153 (253)
T cd05122          79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--  153 (253)
T ss_pred             CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence            9999999999776 678999999999999999999995   5999999999999999999999999999987654432  


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....++..|+|||.+.....+.++||||||+++++|++|+.|+...........      . .......+..      
T Consensus       154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~------~-~~~~~~~~~~------  219 (253)
T cd05122         154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK------I-ATNGPPGLRN------  219 (253)
T ss_pred             -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH------H-HhcCCCCcCc------
Confidence             2234578899999999888889999999999999999999999875432111100      0 0011111111      


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .......+.+++.+||+.||.+|||+.|++++
T Consensus       220 -~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         220 -PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             -ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             11125678999999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=6.9e-32  Score=287.65  Aligned_cols=259  Identities=25%  Similarity=0.328  Sum_probs=195.0

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      ++.++||.|++|.||+|...   .++..|+||++....  ....+.+.+|++++++++|+|++++++++.+++..++|||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e   78 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDK---LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE   78 (283)
T ss_pred             chheEecCCCCeEEEEEEEc---CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence            45688999999999999874   356789999986432  2223568889999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          600 FLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |++ ++|.+++....  .+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||+++.......
T Consensus        79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence            995 68999987655  78999999999999999999995   4999999999999999999999999999976543221


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc--------Cc-
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN--------EK-  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--------~~-  747 (813)
                      .  .....++..|+|||.+.+. .++.++||||||+++|||++|+.||........  +..........        .. 
T Consensus       155 ~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07835         155 T--YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSL  230 (283)
T ss_pred             c--cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhc
Confidence            1  1223468899999988654 568899999999999999999999975433211  00000000000        00 


Q ss_pred             ------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 ------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .......... .........+.+++.+||+.+|.+|||++|++++
T Consensus       231 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         231 PDYKPTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhhhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                  0000000000 0011234678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.1e-32  Score=292.50  Aligned_cols=252  Identities=22%  Similarity=0.366  Sum_probs=199.6

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccc-cCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~  593 (813)
                      ....|++.++||+||.+.|||+...    +...+|+|++...  ..+....|.+|+..|.+|+ |.+||+|++|-..+..
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s----~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~  434 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNS----DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY  434 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecC----CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence            3455777899999999999998753    5567888877532  2334566999999999995 9999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCC--CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +||||||- ..+|..+|.....  ..| .+..+..|++.++.++|++   +|||.||||.|+|+-.. .+||+|||+|..
T Consensus       435 lYmvmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVkG-~LKLIDFGIA~a  508 (677)
T KOG0596|consen  435 LYMVMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVKG-RLKLIDFGIANA  508 (677)
T ss_pred             EEEEeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEee-eEEeeeechhcc
Confidence            99999975 5699999987643  234 7778899999999999977   99999999999999764 899999999999


Q ss_pred             cccCcccceeecccccccccCcccccCC-----------CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNS-----------TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  740 (813)
                      +..+.........+||..||+||.+...           +.+.++||||+|||||+|+.|+.||.....     .  +  
T Consensus       509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----~--~--  579 (677)
T KOG0596|consen  509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----Q--I--  579 (677)
T ss_pred             cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----H--H--
Confidence            9888776666778999999999988422           356799999999999999999999963211     0  0  


Q ss_pred             HhhccCccccccccccccccc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          741 DCYRNEKLDDLVEGDMEALND-IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .++..+.++..+...+ .....++.++|..||+.||.+||+..|++++
T Consensus       580 -----aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  580 -----AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             -----HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence                 1233344443221111 1122349999999999999999999999986

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=2e-31  Score=279.31  Aligned_cols=251  Identities=26%  Similarity=0.349  Sum_probs=203.6

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecC--CceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV  597 (813)
                      ...+.||+|++|.||+|...   .++..+++|++.....  ...+.+.+|+.++++++|+||+++++.+...  ...++|
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           3 TRGELLGRGSFGSVYLALDK---DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             eeeeEeeecCceEEEEEEEC---CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            45678999999999999874   3567899999865432  3456789999999999999999999999888  889999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+++++|.+++.....+++..+..++.|++++|+|||+   .+++|+||+|+||+++.++.++|+|||.+........
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  156 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET  156 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence            9999999999999887789999999999999999999995   5999999999999999999999999999987765432


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      ........++..|+|||.+.....+.++||||||+++++|++|..||........     .............       
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~-------  224 (260)
T cd06606         157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-----ALYKIGSSGEPPE-------  224 (260)
T ss_pred             cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHHhccccCCCcC-------
Confidence            1112334588899999999888899999999999999999999999975541110     0111111011111       


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ........+.+++.+|++.+|.+||++.|++++
T Consensus       225 --~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         225 --IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             --CCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence              111235789999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=5.4e-32  Score=284.38  Aligned_cols=247  Identities=26%  Similarity=0.299  Sum_probs=200.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.+.||.|+||.||++...   ..+..+++|.+.....   ...+.+.+|++++++++||||+++++.+.++...++|
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKR---DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEc---cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence            567789999999999999874   3567899999875321   3356789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+.+++|.+++.....+++..+..++.||++||.|||+   .+++|+||+|+||++++++.++|+|||++........
T Consensus        79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence            9999999999999877788999999999999999999995   4999999999999999999999999999887654321


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         .....++..|+|||.+.+...+.++|+||||+++|+|++|+.|+..........+    ......  ..        
T Consensus       156 ---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~--------  218 (258)
T cd05578         156 ---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI----RAKQET--AD--------  218 (258)
T ss_pred             ---ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH----HHHhcc--cc--------
Confidence               2334578899999999988899999999999999999999999976543211111    111110  00        


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCH--HHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTM--KKVL  790 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~--~evl  790 (813)
                      .......+..+.+++.+||+.||.+||++  +|++
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            00111235788899999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=1.3e-31  Score=293.32  Aligned_cols=267  Identities=24%  Similarity=0.348  Sum_probs=196.8

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeecc-ccCCcceEEeEeecC--C
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG--Q  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~--~  592 (813)
                      ...+.+.+.||+|+||.||+|...   ..+..++||++...  .......+..|+.+++++ +|+||+++++++...  .
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~   82 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDR---RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK   82 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEc---CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence            455777899999999999999874   35678999988542  122334577899999999 999999999998654  3


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++|+||++ ++|..++... .+++..+..++.||+.||+|||+   .+|+|+||||+||+++.++.+||+|||+++..
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence            6899999997 5898888766 77899999999999999999995   59999999999999999999999999999876


Q ss_pred             ccCccc---ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHHH-------H
Q 045343          673 TLNQSK---AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDWA-------F  740 (813)
Q Consensus       673 ~~~~~~---~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~-------~  740 (813)
                      ......   .......++..|+|||.+.+ ...+.++||||||+++|||++|+.||.......... +....       .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI  237 (337)
T ss_pred             ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            543221   11234568899999998765 457889999999999999999999997543322110 00000       0


Q ss_pred             Hhhc----cCccccccccccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          741 DCYR----NEKLDDLVEGDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       741 ~~~~----~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+.    ...+..+......  ..........+.+++.+||+.+|.+|||+.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000    0000000000000  00001235678999999999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=1e-31  Score=282.87  Aligned_cols=243  Identities=23%  Similarity=0.292  Sum_probs=195.9

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||.|++|.||++...   ..+..+++|.+.....   ...+.+.+|+.++++++|+||+++++.+.+++..++|+||+++
T Consensus         1 lg~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (262)
T cd05572           1 LGVGGFGRVELVKVK---SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLG   77 (262)
T ss_pred             CCCCCceEEEEEEEC---CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCC
Confidence            799999999999874   3567899999864321   2345688999999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeec
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      ++|.+++.....+++..+..++.||+.||.|||+   .+++|+||+|+||+++.++.++|+|||+++.......   ...
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~---~~~  151 (262)
T cd05572          78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK---TWT  151 (262)
T ss_pred             CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---ccc
Confidence            9999999887788999999999999999999995   5999999999999999999999999999987654321   223


Q ss_pred             ccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHH
Q 045343          684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK  763 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (813)
                      ..++..|++||.+....++.++|+||||+++|||++|..||.....+.....    .....         ..........
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~  218 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY----NDILK---------GNGKLEFPNY  218 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHH----HHHhc---------cCCCCCCCcc
Confidence            4578899999999888899999999999999999999999975542111111    11110         0000011112


Q ss_pred             HHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 045343          764 CVEKLVMVSIWCIQEDPSLRPT-----MKKVLQ  791 (813)
Q Consensus       764 ~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~  791 (813)
                      ....+.+++.+||+.+|.+||+     ++|+++
T Consensus       219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            2578899999999999999999     667665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=1.1e-31  Score=287.99  Aligned_cols=266  Identities=18%  Similarity=0.202  Sum_probs=185.8

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccch-----------hhhheeeeeeccccCCcceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-----------EFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~-----------~~~~E~~~l~~l~h~niv~l  584 (813)
                      +....+.+.+.||+|+||.||+|....+......+++|...........           ....+...+..++|+|++++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   88 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY   88 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence            3445677889999999999999987543222455666654322111100           11122334556789999999


Q ss_pred             EeEeecCC----ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          585 LGFCDEGQ----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       585 ~g~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      ++.+....    ..++++|++.. ++.+.+......++..+..++.|+++||+|||+   .+|+||||||+|||++.++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~  164 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR  164 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence            99765543    23567776543 566666555556788899999999999999995   49999999999999999999


Q ss_pred             EEEeeccCccccccCccc-----ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhh
Q 045343          661 ARISDFGLAKLLTLNQSK-----AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL  735 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l  735 (813)
                      ++|+|||+++.+..+...     .......||+.|+|||++.+..++.++|||||||+++||++|+.||...........
T Consensus       165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~  244 (294)
T PHA02882        165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH  244 (294)
T ss_pred             EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence            999999999876432211     112234699999999999999999999999999999999999999976532211100


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                       ....+.     +..+..+....   ....+.+.+++..|++.+|++||++.++++.|+
T Consensus       245 -~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        245 -AAKCDF-----IKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             -HhHHHH-----HHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence             000000     01111111111   123577889999999999999999999998874

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-33  Score=287.39  Aligned_cols=241  Identities=28%  Similarity=0.330  Sum_probs=196.8

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      -+.||+|+||.||-+...   .+++.+|.|++.+.   ..+++....+|-.+|++++.+.||.+--.++..+.++||+..
T Consensus       190 ~RvlGkGGFGEV~acqvr---aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtl  266 (591)
T KOG0986|consen  190 YRVLGKGGFGEVCACQVR---ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTL  266 (591)
T ss_pred             eEEEecccccceeEEEEe---cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEe
Confidence            368999999999998875   47889999988653   234455678899999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          601 LNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       601 ~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |.||+|.-+|.+..  .+++...+-++.+|+.||++||++   +||+|||||+|||||+.|+++|+|+|+|..+...+. 
T Consensus       267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~-  342 (591)
T KOG0986|consen  267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP-  342 (591)
T ss_pred             ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCCc-
Confidence            99999999998765  789999999999999999999955   999999999999999999999999999998775543 


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                        ....+||.||||||++.+..|+...|.|||||++|||+.|+.||........            .+++++.+-.. ..
T Consensus       343 --~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk------------~eEvdrr~~~~-~~  407 (591)
T KOG0986|consen  343 --IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK------------REEVDRRTLED-PE  407 (591)
T ss_pred             --cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh------------HHHHHHHHhcc-hh
Confidence              3345899999999999999999999999999999999999999974332110            01111111000 01


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                      ..+...++++.++.+..|+.||.+|.--
T Consensus       408 ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  408 EYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             hcccccCHHHHHHHHHHHccCHHHhccC
Confidence            1223456778888888999999999744

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=1.5e-31  Score=284.74  Aligned_cols=261  Identities=21%  Similarity=0.262  Sum_probs=191.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccc-cCCcceEEeEeecC--CceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEG--QNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~~l  596 (813)
                      |.+.++||+|+||.||+|...   .++..+|+|+++.... ........|+.++.++. |+||+++++++.+.  +..++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~---~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSR---KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEc---CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            356788999999999999874   3567899999875322 22234457888888885 99999999999887  78999


Q ss_pred             EEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||++ ++|.+++.. ...+++..++.++.|++.||+|||+   .+++|+||||+||+++. +.+||+|||+++.....
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence            999997 577777765 3578999999999999999999995   49999999999999999 99999999999876433


Q ss_pred             cccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHH-------HHHhhccC
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDW-------AFDCYRNE  746 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~-------~~~~~~~~  746 (813)
                      ..   .....++..|+|||.+.. ..++.++|||||||++|||++|..||......+.. .....       ........
T Consensus       153 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07831         153 PP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS  229 (282)
T ss_pred             CC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence            22   123457889999997654 45788999999999999999999999754432110 00000       00000000


Q ss_pred             ccccccccccc----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVEGDME----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......+...    .......+..+.+++.+||+.+|++||++++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            00000000000    00011346889999999999999999999999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=6.6e-32  Score=295.44  Aligned_cols=267  Identities=25%  Similarity=0.338  Sum_probs=199.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC-----Cc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----QN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  593 (813)
                      |.+.+.||+|+||+||++...   ..+..||||+++...  .....++.+|+.+++.++|+||+++++++...     ..
T Consensus         7 y~~~~~lg~G~~~~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAKNS---ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             eeEEEEeccCCCeEEEEEEec---CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            556788999999999999874   367899999986532  22344677899999999999999999988644     34


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+. ++|.+++.....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++...
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  159 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS  159 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence            799999996 6899998887889999999999999999999995   499999999999999999999999999998764


Q ss_pred             cCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH--------hhc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD--------CYR  744 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~--------~~~  744 (813)
                      .....  .....++..|+|||.+.. ..++.++||||||+++|+|++|+.||.................        ...
T Consensus       160 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07858         160 EKGDF--MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR  237 (337)
T ss_pred             CCccc--ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence            33211  233457889999998865 4688999999999999999999999975432211110000000        000


Q ss_pred             cCcccccc-------cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCc
Q 045343          745 NEKLDDLV-------EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVV  797 (813)
Q Consensus       745 ~~~~~~~~-------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~  797 (813)
                      .....+.+       +..... ........+.+++.+||+.+|++|||++|++++  ++.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         238 NEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             chhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            00000000       000000 011345678999999999999999999999988  66543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=8.1e-32  Score=287.96  Aligned_cols=251  Identities=25%  Similarity=0.371  Sum_probs=191.9

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.++||+|+||.||++...   ..+..+|||++.... ......+.+|+.++.++. |+||+++++++..+...++++|
T Consensus         7 ~~~~~lg~G~~g~vy~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           7 KDLGEIGRGAFGTVNKMLHK---PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHHHHhCCCCceEEEEEEEC---CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            34578999999999999874   356889999986432 223456888999999996 9999999999999999999999


Q ss_pred             ecCCCchhhh---hh--ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          600 FLNNGTLASF---LF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       600 ~~~~gsL~~~---l~--~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      |+.. +|.++   +.  ....+++....+++.|+++||+|||+  ..+++||||||+||+++.++.+||+|||+++....
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence            9864 44443   22  23568899999999999999999995  24899999999999999999999999999976543


Q ss_pred             CcccceeecccccccccCcccccCC---CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS---TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ...   .....++..|+|||.+.+.   .++.++||||||+++|||++|+.||.....     ........... .    
T Consensus       161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~-~----  227 (288)
T cd06616         161 SIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVKG-D----  227 (288)
T ss_pred             CCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcCC-C----
Confidence            321   1233578899999999776   688999999999999999999999864321     00111111110 0    


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .+.+...........+.+++.+||+.+|++|||+++|+++
T Consensus       228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         228 -PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             -CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0111111112356788999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.2e-32  Score=311.18  Aligned_cols=268  Identities=19%  Similarity=0.275  Sum_probs=185.9

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEE------------------Eeeccccccchhhhheeeeeecccc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK------------------KLDRVFQDGEKEFKNEVVVIGQTHH  578 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK------------------~l~~~~~~~~~~~~~E~~~l~~l~h  578 (813)
                      ....|++.++||+|+||+||++.+...  .+...++|                  +++. ......++.+|+.++++++|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~H  222 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRAS--TEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNH  222 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEecc--chhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCC
Confidence            345688889999999999999876432  11111111                  1111 11223467899999999999


Q ss_pred             CCcceEEeEeecCCceEEEEeecCCCchhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       579 ~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      +||+++++++...+..++|+|++. ++|.+++...     ..........++.||+.||.|||+   .+|+||||||+||
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NI  298 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENI  298 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHE
Confidence            999999999999999999999985 4666666432     223456677899999999999995   5999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCC-Ccccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~-~~~~~~~~  732 (813)
                      |++.++.+||+|||+++.+....... .....||..|+|||++.+..++.++|||||||++|||++|..++ ........
T Consensus       299 Ll~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~  377 (501)
T PHA03210        299 FLNCDGKIVLGDFGTAMPFEKEREAF-DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG  377 (501)
T ss_pred             EECCCCCEEEEeCCCceecCcccccc-cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence            99999999999999998765432211 23456999999999999999999999999999999999987544 32222211


Q ss_pred             hhhHHHHHHhh-ccCcc-------cccccc--------ccc-ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          733 AILTDWAFDCY-RNEKL-------DDLVEG--------DME-ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       733 ~~l~~~~~~~~-~~~~~-------~~~~~~--------~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+.+...... ..+..       .+.++.        .+. ..........+.+++.+||+.||.+|||+.|++++
T Consensus       378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            11111111000 00000       000000        000 00001123456788999999999999999999875

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=1.3e-32  Score=272.56  Aligned_cols=284  Identities=23%  Similarity=0.277  Sum_probs=205.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCc-ceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeec-CCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTS-TTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~-~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~  594 (813)
                      ..|+...+||+|.+|.|||++-.+++.. .+.+|||+++.....  ......+|+.+++.++|+||+.|..++.+ +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            3467778999999999999976554421 347999999764321  23457889999999999999999999876 7788


Q ss_pred             EEEEeecCCCchhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC----CCEEEee
Q 045343          595 LLVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY----YNARISD  665 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~----~~~kl~D  665 (813)
                      +|++||.++ +|.++|+.+     ..++...+..|+.||+.|+.|||+   ..|+||||||.|||+..+    |.+||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence            999999988 666666432     457888999999999999999995   499999999999999877    8999999


Q ss_pred             ccCccccccCcccc-eeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchh------hhhhHH
Q 045343          666 FGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE------YAILTD  737 (813)
Q Consensus       666 fGla~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~------~~~l~~  737 (813)
                      ||+++.+.+.-... .....+-|..|.|||.+.+. .|++++|||+.|||+.||++-.+.|.......      ......
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            99999886543221 13345689999999999876 58999999999999999999998886543210      111112


Q ss_pred             HHHHhhccCc------ccccccc-------c--cccccc-H-------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          738 WAFDCYRNEK------LDDLVEG-------D--MEALND-I-------KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       738 ~~~~~~~~~~------~~~~~~~-------~--~~~~~~-~-------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .+.+.+....      +.++.+.       .  ...... .       ...+...+|+..+|+.||.+|.|+++.+++. 
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~-  338 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP-  338 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc-
Confidence            2222221110      1111111       0  000000 0       0122367899999999999999999998875 


Q ss_pred             cCcCCCCCCCCCC
Q 045343          795 GVVEVSLPPNPYP  807 (813)
Q Consensus       795 ~~~~~~~p~~p~~  807 (813)
                      -..+.+.||.|+.
T Consensus       339 yF~~d~lpp~pt~  351 (438)
T KOG0666|consen  339 YFTEDPLPPLPTS  351 (438)
T ss_pred             ccccCCCCCCccc
Confidence            3455667777753

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.97  E-value=7.6e-32  Score=283.78  Aligned_cols=247  Identities=26%  Similarity=0.346  Sum_probs=197.5

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||.||++...   ..+..+++|.+.....   ...+.+.+|++++++++|+||+++++.+..+...++|+||+++
T Consensus         1 lg~g~~~~vy~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (265)
T cd05579           1 ISKGAYGRVFLAKKK---STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPG   77 (265)
T ss_pred             CCCCCceEEEEEEEC---CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCC
Confidence            689999999999874   3467899999865322   3345688899999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc-----
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK-----  678 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~-----  678 (813)
                      ++|.+++.....+++..+..++.||++||+|||+   .+++|+||+|+||++++++.++|+|||++.........     
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  154 (265)
T cd05579          78 GDLASLLENVGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD  154 (265)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence            9999999877788999999999999999999995   49999999999999999999999999998765433210     


Q ss_pred             -ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 -AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 -~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                       .......++..|+|||.......+.++||||||++++||++|+.||.....++..      .. ...+..        .
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~------~~-~~~~~~--------~  219 (265)
T cd05579         155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF------QN-ILNGKI--------E  219 (265)
T ss_pred             cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH------HH-HhcCCc--------C
Confidence             1123345788999999998888899999999999999999999999754432211      00 010000        0


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ..........+.+++.+||+.+|.+|||+.++.+.|+
T Consensus       220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            0011112577899999999999999999977776665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=7.3e-32  Score=295.04  Aligned_cols=267  Identities=24%  Similarity=0.317  Sum_probs=195.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecC-----Cc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----QN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  593 (813)
                      .|.+.++||+|+||.||+|...   .++..||||+++... ......+.+|+.++++++|+||+++++++...     ..
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHK---PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEc---CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            4667789999999999999874   356789999986422 22335578899999999999999999987543     35


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+.+ +|..++.. ..+++..+..++.|+++||+|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        83 ~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          83 VYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             EEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            7999999975 77776643 468899999999999999999995   499999999999999999999999999998764


Q ss_pred             cCcccc-eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKL  748 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~  748 (813)
                      ...... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........   ......+..   +..
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~---~~~~~~~~~~~~~~~  234 (336)
T cd07849         158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL---NLILGVLGTPSQEDL  234 (336)
T ss_pred             ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCCHHHH
Confidence            322211 1223468899999998754 46889999999999999999999999654321110   001111110   000


Q ss_pred             cccccc-------------cccc-cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCc
Q 045343          749 DDLVEG-------------DMEA-LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVV  797 (813)
Q Consensus       749 ~~~~~~-------------~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~  797 (813)
                      ..+...             .... .........+.+++.+||+.+|++|||+.|++++  ++...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            000000             0000 0001235678899999999999999999999987  65544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-32  Score=293.13  Aligned_cols=251  Identities=23%  Similarity=0.343  Sum_probs=203.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      -.+++.+||.|+||.|||++..   ..+...|-|.+........+++.-||+||+...||+||+|++.|..++.++++.|
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nk---et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNK---ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcc---cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            3566788999999999999874   3455677888877777777889999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||.||-.+.++-. ...+.+.++.-++.|++.||.|||   +..|||||||+.|||++-+|.++|+|||.+.........
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence            9999999988755 467899999999999999999999   459999999999999999999999999998654332211


Q ss_pred             ceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                        ...+.||+.|||||+..     ..+|+.++||||||+.|.||..+.+|.........  +.     .+....     .
T Consensus       187 --RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV--ll-----KiaKSe-----P  252 (1187)
T KOG0579|consen  187 --RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LL-----KIAKSE-----P  252 (1187)
T ss_pred             --hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH--HH-----HHhhcC-----C
Confidence              34577999999999874     46799999999999999999999998764332111  00     000111     1


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.+  ..+..+...+.+++.+||..||..||++.+++++
T Consensus       253 PTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  253 PTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             Ccc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            111  1234567889999999999999999999999876

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=1.7e-31  Score=284.65  Aligned_cols=262  Identities=23%  Similarity=0.340  Sum_probs=195.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +++.++||+|++|.||+|...   .++..||||+++..... ..+.+.+|+.++++++|+||+++++++.+.+..++|+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNR---TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             ceEeeeeccCCceEEEEEEEC---CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            456789999999999999874   35778999998754322 34567789999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++ +|.+++...   ..+++..+..++.||++||.|||+   .+++|+||||+||++++++.++|+|||+++......
T Consensus        79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~  154 (284)
T cd07836          79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV  154 (284)
T ss_pred             cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence            9985 888887643   357899999999999999999995   499999999999999999999999999997654322


Q ss_pred             ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHHH-------HHhhc-cC
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDWA-------FDCYR-NE  746 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~-------~~~~~-~~  746 (813)
                      ..  .....++..|++||.+.+. .++.++||||||+++|||++|+.||......+... +....       +..+. ..
T Consensus       155 ~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07836         155 NT--FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP  232 (284)
T ss_pred             cc--cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence            11  1234568899999988654 56889999999999999999999997554322111 00000       00000 00


Q ss_pred             cccc----cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDD----LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~----~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....    ..+... ..........+.+++.+|++.||.+||++.|++++
T Consensus       233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         233 EYKPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             hhcccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000    000000 00011235678899999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=1.9e-31  Score=285.61  Aligned_cols=245  Identities=26%  Similarity=0.360  Sum_probs=196.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      .+||+|+||.||++...   .++..||||++..........+.+|+.++++++|+||+++++.+...+..++||||++++
T Consensus        26 ~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          26 IKIGEGSTGIVCIATVK---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHcCCCCCeEEEEEEEc---CCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            67999999999999874   367899999986544445566889999999999999999999999999999999999999


Q ss_pred             chhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecc
Q 045343          605 TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI  684 (813)
Q Consensus       605 sL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~  684 (813)
                      +|.+++.. ..+++.....++.|++.+|+|||+   .+++|+||+|+||+++.++.++|+|||++.........  ....
T Consensus       103 ~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~--~~~~  176 (292)
T cd06657         103 ALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKSL  176 (292)
T ss_pred             cHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccccc--cccc
Confidence            99998754 357899999999999999999995   49999999999999999999999999998765433211  2234


Q ss_pred             cccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHH
Q 045343          685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKC  764 (813)
Q Consensus       685 ~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  764 (813)
                      .++..|+|||.+.+..++.++|+||||+++|||++|..||..........   ......         ......  ....
T Consensus       177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~---~~~~~~---------~~~~~~--~~~~  242 (292)
T cd06657         177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK---MIRDNL---------PPKLKN--LHKV  242 (292)
T ss_pred             ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhhC---------CcccCC--cccC
Confidence            58899999999988888999999999999999999999987543321111   000000         001100  1123


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          765 VEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       765 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...+.+++.+||+.+|.+||++.+++++
T Consensus       243 ~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         243 SPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             CHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            4567889999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=1.9e-31  Score=288.00  Aligned_cols=266  Identities=21%  Similarity=0.273  Sum_probs=192.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCC-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  592 (813)
                      .|.+.++||+|+||.||+|...   .++..||||.+......  ....+.+|++++++++|+||+++++++....     
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHK---KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEEC---CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            4677789999999999999874   35788999988643221  2234567999999999999999999986654     


Q ss_pred             ---ceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          593 ---NRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       593 ---~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                         ..++|+||+.+ +|.+++... ..+++..++.++.||++||.|||+.   +++|+||||+||+++.++.+||+|||+
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCC
Confidence               34999999975 777777554 4689999999999999999999954   999999999999999999999999999


Q ss_pred             ccccccCccc--ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          669 AKLLTLNQSK--AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       669 a~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      +.........  .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.....................
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP  245 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            9876433221  111234578889999988664 4688999999999999999999999765433222111111110000


Q ss_pred             Cccccc---------cccc-----cc-ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDL---------VEGD-----ME-ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~---------~~~~-----~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.....         ..+.     .. ..........+.+++.+||+.||.+|||++|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            000000         0000     00 00000123567799999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=2.5e-31  Score=286.20  Aligned_cols=264  Identities=23%  Similarity=0.271  Sum_probs=194.7

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCC--
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--  592 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--  592 (813)
                      ....+++.+.||+|+||.||+|...   .++..||||+++....  .....+.+|++++++++|+||+++++++.+..  
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~   81 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDK---DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA   81 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEEC---CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence            3455677899999999999999985   3567899999865322  22345778999999999999999999987655  


Q ss_pred             --------ceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          593 --------NRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       593 --------~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                              ..++|+||+++ +|.+++.. ...+++..+..++.||+.||+|||+   .+|+|+||||+||++++++.+||
T Consensus        82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          82 LDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             hhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEe
Confidence                    78999999987 66666654 3568999999999999999999995   49999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||++.......... .....++..|+|||.+.+ ..++.++||||||++++||++|+.||......+...  . ....
T Consensus       158 ~dfg~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~--~-~~~~  233 (302)
T cd07864         158 ADFGLARLYNSEESRP-YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLE--L-ISRL  233 (302)
T ss_pred             CcccccccccCCcccc-cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH--H-HHHH
Confidence            9999998765432211 122345778999998865 357889999999999999999999997543321111  1 1111


Q ss_pred             hcc---Ccccccc--------c------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRN---EKLDDLV--------E------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~---~~~~~~~--------~------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...   .....+.        +      ....... ...+..+.+++..||+.+|.+||++.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             hCCCChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            000   0000000        0      0000000 1135678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-31  Score=289.40  Aligned_cols=266  Identities=22%  Similarity=0.313  Sum_probs=194.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecC--CceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~  595 (813)
                      +.+.++||+|+||.||+|..... ..+..+|||.+....   ....+.+.+|+.++++++||||+++++++.+.  ...+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            45678899999999999998531 256899999987632   23345678899999999999999999999887  7899


Q ss_pred             EEEeecCCCchhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC----CCCEEEeec
Q 045343          596 LVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----YYNARISDF  666 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~----~~~~kl~Df  666 (813)
                      +||||+++ +|.+++...     ..+++..++.++.||+.||.|||+   .+|+||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999976 565555321     367889999999999999999995   59999999999999999    999999999


Q ss_pred             cCccccccCccc-ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhh-------hhhHH
Q 045343          667 GLAKLLTLNQSK-AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-------AILTD  737 (813)
Q Consensus       667 Gla~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-------~~l~~  737 (813)
                      |++......... .......++..|+|||.+.+. .++.++||||||++++||++|+.||.....+..       ..+..
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            999876433221 112234578899999988664 578999999999999999999999975443220       01111


Q ss_pred             HHHHhhcc------------Cccccccc---------ccccccccH--HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 WAFDCYRN------------EKLDDLVE---------GDMEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ~~~~~~~~------------~~~~~~~~---------~~~~~~~~~--~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      . ...+..            .......+         ..+......  .....+.+++.+||+.||++|||+.|++++
T Consensus       237 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 I-FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             H-HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            0 010000            00000000         000000000  234578899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=2e-31  Score=284.97  Aligned_cols=259  Identities=21%  Similarity=0.243  Sum_probs=202.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      +.+.+.||+|++|.||++.......++..+|||.++...    ....+.+.+|+.++.++ +|+||+++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            456789999999999999876555567889999986432    12234678899999999 5999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++++|.+++.....+++..+..++.|++++|.|||+   .+++|+||||+||+++.++.++|+|||+++.....
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  158 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE  158 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence            999999999999999877788999999999999999999995   59999999999999999999999999998876543


Q ss_pred             cccceeecccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~--~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .... .....++..|+|||.+.+..  .+.++||||||++++||++|..||........  ...........       .
T Consensus       159 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~-------~  228 (288)
T cd05583         159 EEER-AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILKS-------K  228 (288)
T ss_pred             cccc-cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHcc-------C
Confidence            3221 22345889999999987665  78899999999999999999999864322110  00111111100       0


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..    ........+.+++.+||+.+|++|||+.++.+.|+..
T Consensus       229 ~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         229 PP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             CC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            00    1112345678999999999999999998888877653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=1.2e-31  Score=281.27  Aligned_cols=248  Identities=23%  Similarity=0.362  Sum_probs=197.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|+||.||+|...   .++..+|+|.+....  ....+.+.+|+.++++++|+||+++++.+......++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   78 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAK---SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVM   78 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEc---CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEE
Confidence            456789999999999999885   356779999986431  223456889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~~~  675 (813)
                      ||+++++|.+++....  .+++..+..++.|+++||.|||+   .+++|+||||+||++++++ .+||+|||.+......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            9999999999986543  57899999999999999999995   4999999999999999875 4699999999876533


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....|+..|+|||++.+..++.++|+||||++++||++|..|+.......      ....... .....+    
T Consensus       156 ~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~-~~~~~~----  222 (257)
T cd08225         156 MEL--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ------LVLKICQ-GYFAPI----  222 (257)
T ss_pred             ccc--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHhc-ccCCCC----
Confidence            211  223458889999999988889999999999999999999999986443211      1111111 111111    


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .......+.+++.+|++.+|++|||+.||+++
T Consensus       223 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         223 -----SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             -----CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                 11234678899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=2.2e-31  Score=285.55  Aligned_cols=260  Identities=22%  Similarity=0.267  Sum_probs=191.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccc-cCCcceEEeEeecCCc----
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQN----  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~----  593 (813)
                      +++.+.||+|+||.||+|...   .++..||||+++....  .....+.+|+.++++++ |+||+++++++...+.    
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~---~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDK---NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             ceEeeEecccCCeEEEEEEEC---CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            556788999999999999874   3567899998765322  22356788999999995 6999999999977665    


Q ss_pred             -eEEEEeecCCCchhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeec
Q 045343          594 -RLLVYEFLNNGTLASFLFGN-----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDF  666 (813)
Q Consensus       594 -~~lV~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Df  666 (813)
                       .++||||+++ +|.+++...     ..+++..++.++.||++||.|||+   .+|+||||||+||+++. ++.+||+||
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~df  155 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADL  155 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeec
Confidence             8999999986 788887542     357899999999999999999995   59999999999999998 899999999


Q ss_pred             cCccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       667 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      |+++........  .....+++.|+|||++.+ ..++.++||||||+++|||++|..||.........  ... ......
T Consensus       156 g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~--~~~-~~~~~~  230 (295)
T cd07837         156 GLGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL--LHI-FKLLGT  230 (295)
T ss_pred             ccceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHH-HHHhCC
Confidence            998865432211  122346788999998865 45789999999999999999999999754332110  000 010000


Q ss_pred             C---ccccc---cc----cccc----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 E---KLDDL---VE----GDME----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~---~~~~~---~~----~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .   .....   .+    +...    ..........+.+++.+||+.||.+||++.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0   00000   00    0000    00011245678899999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=2.4e-31  Score=292.91  Aligned_cols=262  Identities=24%  Similarity=0.303  Sum_probs=194.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC-----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----  591 (813)
                      ..|...+.||+|+||.||++...   .++..||||.+....  ....+++.+|+.++++++|+||+++++++...     
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDT---VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEEC---CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            44666789999999999999874   356789999986432  22334677899999999999999999988543     


Q ss_pred             -CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          592 -QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       592 -~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                       ...++|+||+.+ +|.+.+...  +++..+..++.|++.||+|||.   .+|+||||||+||+++.++.+||+|||+++
T Consensus        93 ~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850          93 FQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             cCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence             357999999964 787777544  7888999999999999999995   499999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHH-----------H
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTD-----------W  738 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~-----------~  738 (813)
                      .......   .....++..|+|||.+.+..++.++||||||+++++|++|+.||........ ..+..           .
T Consensus       167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (353)
T cd07850         167 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR  243 (353)
T ss_pred             eCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            7643321   2234578899999999999999999999999999999999999975432110 00000           0


Q ss_pred             ----HHHhhccC------cccccccccc----cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          739 ----AFDCYRNE------KLDDLVEGDM----EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       739 ----~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          ........      ...++.....    ...........+.+++.+||+.||.+|||+.|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                00000000      0001111000    000011345678899999999999999999999965

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.7e-31  Score=292.69  Aligned_cols=271  Identities=23%  Similarity=0.291  Sum_probs=195.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC------
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ------  592 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------  592 (813)
                      +...+.||+|+||.||+|...   .++..||||++....  ......+.+|+.++++++|+||+++++++....      
T Consensus        17 y~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          17 YTSLKQVGSGAYGSVCSAIDK---RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             eEEEEEeeecCCeEEEEEEeC---CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            345578999999999999874   356789999986432  222345788999999999999999999986543      


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++|+||+.. +|..++.  ..+++..+..++.|+++||+|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            46899999864 6666542  357899999999999999999995   49999999999999999999999999998765


Q ss_pred             ccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHhh
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDCY  743 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~  743 (813)
                      ...     .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............        ....
T Consensus       168 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T cd07879         168 DAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKL  242 (342)
T ss_pred             CCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence            322     223457889999999876 46888999999999999999999999754321111000000        0000


Q ss_pred             ccCccccccc-------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcCCCCCCCCC
Q 045343          744 RNEKLDDLVE-------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVEVSLPPNPY  806 (813)
Q Consensus       744 ~~~~~~~~~~-------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~~~p~~p~  806 (813)
                      ..........       ..+.. ........+.+++.+||+.||.+||++.|++++  ++...+.+..+.|.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~~~  313 (342)
T cd07879         243 EDKAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETEQQ  313 (342)
T ss_pred             cccchHHHHhhcCCcccchHHH-HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCCCC
Confidence            0000000000       00000 001124568899999999999999999999966  77776654444443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=3e-31  Score=286.63  Aligned_cols=262  Identities=27%  Similarity=0.284  Sum_probs=193.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecC--CceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~  595 (813)
                      .+++.+.||+|+||.||+|...   ..+..||+|+++.....  ....+.+|+.++++++|+||+++++++.+.  +..+
T Consensus         8 ~y~~~~~ig~g~~~~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           8 EFEKLNRIGEGTYGIVYRARDT---TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             ceeEeeeeeecCCEEEEEEEEC---CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            4567789999999999999874   35678999998643221  123466899999999999999999998655  4689


Q ss_pred             EEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+.+ +|.+++.. ...+++..++.++.||++||+|||+   .+++|+||||+||+++.++.+||+|||++.....
T Consensus        85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            99999975 78777764 3668999999999999999999995   4999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC---cc--
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE---KL--  748 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~~--  748 (813)
                      ....  .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....   ........   ..  
T Consensus       161 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~  235 (309)
T cd07845         161 PAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL---IIQLLGTPNESIWPG  235 (309)
T ss_pred             ccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCChhhchh
Confidence            3211  222345788999999865 4578999999999999999999999975543221111   11110000   00  


Q ss_pred             -------c--ccccccccc--cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          749 -------D--DLVEGDMEA--LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       749 -------~--~~~~~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                             .  .+.......  .......+.+.+++.+||+.||++|||+.|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~  291 (309)
T cd07845         236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS  291 (309)
T ss_pred             hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence                   0  000000000  00011356778999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=3.7e-31  Score=281.27  Aligned_cols=243  Identities=28%  Similarity=0.337  Sum_probs=192.2

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||+||++...   ..++.+++|.+....   ......+.+|++++++++|+||+++++.+...+..++|+||+++
T Consensus         1 lg~g~~g~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   77 (277)
T cd05577           1 LGKGGFGEVCACQVK---ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNG   77 (277)
T ss_pred             CCCCCceeEEEEEEc---CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCC
Confidence            699999999999764   356789999886432   12234567899999999999999999999999999999999999


Q ss_pred             CchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          604 GTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       604 gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      ++|.+++....  .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++........   .
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~  151 (277)
T cd05577          78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK---I  151 (277)
T ss_pred             CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc---c
Confidence            99999997654  68899999999999999999995   4999999999999999999999999999876543211   2


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hhhhHHHHHHhhccCcccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....++..|+|||.+.+..++.++||||||+++++|++|+.||....... ...+.    ..    ....      ....
T Consensus       152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~----~~~~------~~~~  217 (277)
T cd05577         152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK----RR----TLEM------AVEY  217 (277)
T ss_pred             ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH----hc----cccc------cccC
Confidence            23457889999999988889999999999999999999999996543211 11110    00    0000      0001


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .......+.+++.+||+.+|.+||     ++.+++++
T Consensus       218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            112356788999999999999999     77777653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=4e-31  Score=288.14  Aligned_cols=260  Identities=24%  Similarity=0.300  Sum_probs=191.1

Q ss_pred             ccccee--eeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRG--SFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G--~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      ++||+|  +||+||++...   ..+..||||.+....  ....+.+.+|+.+++.++|+||+++++++..++..++|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~   80 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHT---PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF   80 (328)
T ss_pred             HHhCCcccCceeEEEEEEc---CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence            467776  89999999863   467899999986432  22345688899999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          601 LNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       601 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      +.+++|.+++...  ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.++++||+.+.........
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence            9999999998754  457889999999999999999995   59999999999999999999999999865433221111


Q ss_pred             c-e----eecccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh-h-------
Q 045343          679 A-I----RTAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC-Y-------  743 (813)
Q Consensus       679 ~-~----~~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-~-------  743 (813)
                      . .    .....++..|+|||++.+.  .++.++||||||++++||++|+.||.........  ....... .       
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~  235 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML--LQKLKGPPYSPLDITT  235 (328)
T ss_pred             ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH--HHHhcCCCCCCccccc
Confidence            0 0    0112345679999999764  4788999999999999999999999754321110  0000000 0       


Q ss_pred             ------------------------ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 ------------------------RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                              .......+....+.......+...+.+++++||+.||++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                                    0000001111111222233456788999999999999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=1.2e-31  Score=293.03  Aligned_cols=268  Identities=22%  Similarity=0.332  Sum_probs=198.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec----CC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----GQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~  592 (813)
                      ..+++.+.||+|+||.||+|...   ..+..|++|++.....  ...+.+.+|+.++++++|+||+++++++..    ..
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDT---RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEc---CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence            34566788999999999999875   3567899999875322  234567789999999999999999998753    34


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++|+||+. ++|.+++.....+++..+..++.||++||.|||+   .+|+||||||+||+++.++.+||+|||++...
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            6799999996 6899999877789999999999999999999995   49999999999999999999999999999876


Q ss_pred             ccCccc--ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HH
Q 045343          673 TLNQSK--AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FD  741 (813)
Q Consensus       673 ~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~  741 (813)
                      ......  .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............        ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence            433221  11123468889999999865 45789999999999999999999999754332111100000        00


Q ss_pred             hhccCccccccccc-cccc-----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          742 CYRNEKLDDLVEGD-MEAL-----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       742 ~~~~~~~~~~~~~~-~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ......+.+..+.. ....     ........+.+++.+||+.+|.+||++.+++++-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  295 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP  295 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence            00000010000000 0000     0012357789999999999999999999999754

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=3.4e-31  Score=286.11  Aligned_cols=250  Identities=25%  Similarity=0.308  Sum_probs=194.8

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ...++...+.||+|+||.||+|...   ..+..++||.+....   ....+++.+|+++++.++|+|++++++++.....
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   89 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT   89 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEc---CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCe
Confidence            3344556688999999999999874   356789999886421   2223467789999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .++|+||+. |+|.+++. ....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++...
T Consensus        90 ~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  165 (308)
T cd06634          90 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (308)
T ss_pred             eEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence            999999997 57777664 34567899999999999999999995   49999999999999999999999999998765


Q ss_pred             ccCcccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ...      ....++..|+|||.+.   ....+.++||||||+++|||++|+.|+......+..      ..... ... 
T Consensus       166 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~-~~~-  231 (308)
T cd06634         166 APA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQ-NES-  231 (308)
T ss_pred             cCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH------HHHhh-cCC-
Confidence            432      2345788999999874   345788999999999999999999998643221111      00000 000 


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                             ...........+.+++.+||+.+|.+||++.+++++-.
T Consensus       232 -------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         232 -------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             -------CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence                   00111234567889999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.9e-31  Score=279.91  Aligned_cols=250  Identities=21%  Similarity=0.264  Sum_probs=195.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-----ccccchhhhheeeeeeccccCCcceEEeEeecC--Cc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-----FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~  593 (813)
                      +.+.+.||+|+||.||+|...   ..+..+++|.+...     .....+.+.+|++++++++|+||+++++++.+.  ..
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDA---DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEc---CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence            566789999999999999874   35678999987431     112335688999999999999999999998664  35


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+++++|.+++.....+++....+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++...
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence            78999999999999999877778999999999999999999995   499999999999999999999999999998654


Q ss_pred             cCcc-cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQS-KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      .... ........++..|+|||.+.+...+.++|+||||++++||++|+.||........  .    .........    
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~~~~----  227 (264)
T cd06653         158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--I----FKIATQPTK----  227 (264)
T ss_pred             cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--H----HHHHcCCCC----
Confidence            3211 1112234588999999999988899999999999999999999999974322111  0    111111000    


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           ........+.+.+++.+|++ +|.+||+..+++.+
T Consensus       228 -----~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         228 -----PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             -----CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence                 11122345778899999999 57999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.5e-31  Score=277.04  Aligned_cols=248  Identities=27%  Similarity=0.422  Sum_probs=201.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|++|.||++...   ..+..+++|.+.....  .....+.+|++++++++|+|++++++++.+++..++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNL---ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIIL   78 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEc---CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEE
Confidence            456789999999999999874   3567899999876433  34457899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..+..++.|++.+|.|||+   .+|+|+||||+||+++.++.++|+|||++.........
T Consensus        79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (254)
T cd06627          79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD  155 (254)
T ss_pred             ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence            999999999999887889999999999999999999994   59999999999999999999999999999876543321


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                        .....++..|+|||.+.+...+.++|||+||+++++|++|+.|+........  .    .... ......        
T Consensus       156 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~--~----~~~~-~~~~~~--------  218 (254)
T cd06627         156 --DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA--L----FRIV-QDDHPP--------  218 (254)
T ss_pred             --ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH--H----HHHh-ccCCCC--------
Confidence              2234578899999999888889999999999999999999999874432110  0    0000 000000        


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......+.+.+++.+||+.+|++||++.+++..
T Consensus       219 -~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         219 -LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             -CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence             011235678899999999999999999999853

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=4e-31  Score=289.10  Aligned_cols=260  Identities=21%  Similarity=0.261  Sum_probs=195.7

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--------------chhhhheeeeeeccccCCcceEEeEe
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--------------EKEFKNEVVVIGQTHHKNLVRLLGFC  588 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~g~~  588 (813)
                      +.+.||+|+||+||+|...   ..++.||||+++......              ...+.+|++++++++|+||+++++++
T Consensus        13 ~~~~ig~G~~g~vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDT---LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVY   89 (335)
T ss_pred             hhhcccCCCceeEEEEEEC---CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEE
Confidence            4567999999999999864   356789999886532211              12467899999999999999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      ..++..++||||+. ++|.+++.....+++.....++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||+
T Consensus        90 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~dfg~  165 (335)
T PTZ00024         90 VEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADFGL  165 (335)
T ss_pred             ecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECCccc
Confidence            99999999999997 6899999887788999999999999999999995   5999999999999999999999999999


Q ss_pred             ccccccCc------------ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhh
Q 045343          669 AKLLTLNQ------------SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL  735 (813)
Q Consensus       669 a~~~~~~~------------~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l  735 (813)
                      +.......            .........++..|+|||.+.+. .++.++||||||+++|||++|+.||......+..  
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--  243 (335)
T PTZ00024        166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL--  243 (335)
T ss_pred             eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence            98665111            00111223467889999998764 4688999999999999999999999765432211  


Q ss_pred             HHHHHHhhccCc---ccc------------cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          736 TDWAFDCYRNEK---LDD------------LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       736 ~~~~~~~~~~~~---~~~------------~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                       ..+........   ...            ........ ........+.+++..||+.+|++||+++|++.+-
T Consensus       244 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~  314 (335)
T PTZ00024        244 -GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEALKHE  314 (335)
T ss_pred             -HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence             11111111000   000            00000000 0012356788999999999999999999999754

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=3.9e-31  Score=283.59  Aligned_cols=260  Identities=25%  Similarity=0.338  Sum_probs=191.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +++.++||+|++|.||+|...   .+++.++||++.....  ...+.+.+|++++++++|+||+++++++..+...++|+
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDR---VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEec---CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            566789999999999999874   3567899998864322  23356888999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~~  675 (813)
                      ||++ ++|.+++....  .+++.....++.||+.||+|||+   .+++|+||+|+||+++. ++.+||+|||++......
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            9996 57777775443  35778888999999999999995   49999999999999985 567999999999765432


Q ss_pred             cccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC---c----
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE---K----  747 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~----  747 (813)
                      ...  .....++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+...  . ........   .    
T Consensus       157 ~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~--~-~~~~~~~~~~~~~~~~  231 (294)
T PLN00009        157 VRT--FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF--K-IFRILGTPNEETWPGV  231 (294)
T ss_pred             ccc--cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--H-HHHHhCCCChhhcccc
Confidence            111  1234568899999988664 57889999999999999999999997543321110  0 00000000   0    


Q ss_pred             --cccccc--ccccc----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 --LDDLVE--GDMEA----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 --~~~~~~--~~~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        +.....  +....    .......+.+.+++.+|++.+|++||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000000  00000    0011235678899999999999999999999864

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.4e-31  Score=277.78  Aligned_cols=245  Identities=22%  Similarity=0.278  Sum_probs=189.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeee-eeccccCCcceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVV-IGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.||+|+||.||+|...   ..+..||||.++....   .....+..|..+ ....+|+|++++++++..++..++|+||
T Consensus         2 ~~l~~g~~~~v~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (260)
T cd05611           2 KPISKGAFGSVYLAKKR---STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY   78 (260)
T ss_pred             ccCCcCCCeeEEEEEec---CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence            57999999999999874   3567899999864321   112233444433 3455899999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++++|.+++.....+++..+..++.||+.||.|||.   .+++|+||+|+||+++.++.+||+|||+++....      
T Consensus        79 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------  149 (260)
T cd05611          79 LNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------  149 (260)
T ss_pred             cCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence            9999999999887788999999999999999999995   5999999999999999999999999999876432      


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....++..|+|||.+.+..++.++||||||+++|||++|..||.........       .........      .....
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~------~~~~~  216 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVF-------DNILSRRIN------WPEEV  216 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHH-------HHHHhcccC------CCCcc
Confidence            12345788999999998888899999999999999999999999754332111       101011000      00001


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      .......+.+++.+||+.+|++||++.++.+.|.
T Consensus       217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            1124577899999999999999998766655553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=2.5e-31  Score=278.62  Aligned_cols=246  Identities=27%  Similarity=0.355  Sum_probs=200.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +++.++||+|++|.||++...   .++..+++|.+....  .....++.+|+.++++++|+||+++++++.+....++|+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRL---SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM   78 (256)
T ss_pred             ceEeeeecCCCceeEEEEEEC---CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe
Confidence            456789999999999999764   356789999986532  223456788999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||+++++|.+++..    ...+++..+..++.|++.||+|||.   .+++|+||+|+||++++++.+||+|||+++....
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence            99999999999865    3567899999999999999999994   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..    .....++..|+|||.+.+..++.++|+||||++++||++|+.||.....++..       ..........    
T Consensus       156 ~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~----  220 (256)
T cd08530         156 NM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR-------YKVQRGKYPP----  220 (256)
T ss_pred             CC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHhcCCCCC----
Confidence            41    22345788999999999988999999999999999999999999754332111       0111111111    


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           ........+.+++.+|++.+|++||++.|++++
T Consensus       221 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         221 -----IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             -----CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                 112345778999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=3.2e-31  Score=282.23  Aligned_cols=259  Identities=23%  Similarity=0.329  Sum_probs=198.1

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.||+|++|.||++...   .++..+++|++......  ....+..|+.++++++|+||+++++++..+...++|+|
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   78 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDK---LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFE   78 (283)
T ss_pred             ccceeeecCCCceEEEEEcC---CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence            45678999999999999874   35778999998654322  34568889999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++ +|.+++.. ...+++..+..++.||++||.|||+   .+|+|+||||+||+++.++.++|+|||.+.........
T Consensus        79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP  154 (283)
T ss_pred             ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence            9975 88877765 3578999999999999999999995   49999999999999999999999999999877654311


Q ss_pred             ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cccccccc-
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDDLVE-  753 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~-  753 (813)
                        .....++..|+|||.+.+. ..+.++|+||||+++|+|++|+.||......+....   ..+.+..   .....+.+ 
T Consensus       155 --~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  229 (283)
T cd05118         155 --YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTSL  229 (283)
T ss_pred             --ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchhh
Confidence              2234578889999998776 788999999999999999999999965443221100   0010000   00000000 


Q ss_pred             ----------cccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 ----------GDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ----------~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                ....  ..........+.+++..||+.||.+||++.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                      0000  00112346789999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=4.1e-31  Score=281.62  Aligned_cols=260  Identities=25%  Similarity=0.374  Sum_probs=194.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.||+|++|+||+|...   ..++.++||++...... ......+|+..+.+++ |+||+++++++.+++..++|||
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNK---ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             eeheeeccCCceEEEEEEEC---CCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            56788999999999999984   24678999998654221 2223456888899998 9999999999999999999999


Q ss_pred             ecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          600 FLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |+ +++|.+++....  .+++..+..++.|++.+|.|||+   .+++|+||+|+||++++++.++|+|||++........
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP  154 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence            99 889999887654  78999999999999999999995   4999999999999999999999999999987653221


Q ss_pred             cceeecccccccccCccccc-CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHH---------HHHHhhccC
Q 045343          678 KAIRTAIRGTKGYVAPEWFR-NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTD---------WAFDCYRNE  746 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~---------~~~~~~~~~  746 (813)
                         .....++..|+|||.+. ...++.++|+||||++++||++|+.||......+... ...         |........
T Consensus       155 ---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07830         155 ---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS  231 (283)
T ss_pred             ---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence               22345788999999875 4457899999999999999999999986554322110 000         000000000


Q ss_pred             ccccccc----ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVE----GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~----~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......    ..+..... .....+.+++.+||+.+|++|||++|++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         232 KLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             cccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0000000    00000001 114678999999999999999999999864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=1.3e-30  Score=275.56  Aligned_cols=241  Identities=20%  Similarity=0.249  Sum_probs=185.8

Q ss_pred             hcccc--cceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          522 NFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       522 ~~~~~--LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .+.+.  ||+|+||.||++...   ..+..+++|.+.......   .  |+.....+ +|+||+++++.+...+..++||
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~---~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHK---PTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             ccccceeecCCCceEEEEEEEc---CCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence            44455  499999999999864   356789999876432111   1  22122212 6999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|.+++.....+++..+..++.||++||.|||+   .+++|+||||+||+++.++ .++|+|||++......  
T Consensus        89 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~--  163 (267)
T PHA03390         89 DYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP--  163 (267)
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence            999999999999887789999999999999999999995   4899999999999999988 9999999998765432  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                          ....++..|+|||++.+..++.++||||||++++||++|+.||.....+. .....+....  .        ....
T Consensus       164 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~--------~~~~  228 (267)
T PHA03390        164 ----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQ--Q--------KKLP  228 (267)
T ss_pred             ----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhh--c--------ccCC
Confidence                22357899999999998889999999999999999999999997443221 1111111110  0        0000


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPT-MKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~  792 (813)
                        ........+.+++.+||+.+|.+||+ ++|++++
T Consensus       229 --~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        229 --FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             --cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence              01134577899999999999999996 6888753

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=6e-31  Score=281.58  Aligned_cols=255  Identities=22%  Similarity=0.258  Sum_probs=198.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc----ccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ----DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      +++.+.||+|+||.||++.......++..||+|.+.....    ...+++.+|+++++++ +|+||+++++.+..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            4567899999999999998754445678899999865321    2235678899999999 5999999999999988999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +|+||+++++|.+++.....+++..+..++.|+++||.|||+   .+++||||+|+|||++.++.+||+|||+++.....
T Consensus        82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  158 (290)
T cd05613          82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED  158 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence            999999999999999888888999999999999999999995   59999999999999999999999999999876443


Q ss_pred             cccceeecccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .... .....|+..|+|||.+...  ..+.++||||||+++|+|++|+.|+........  ............       
T Consensus       159 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~-------  228 (290)
T cd05613         159 EVER-AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-------  228 (290)
T ss_pred             cccc-cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhccC-------
Confidence            2211 2234588899999998753  467899999999999999999999864322110  111111111100       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      +.    ........+.+++.+||+.+|.+||     ++.+++.+
T Consensus       229 ~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         229 PP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             CC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            00    1112346788999999999999997     77777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.1e-31  Score=290.69  Aligned_cols=267  Identities=24%  Similarity=0.338  Sum_probs=204.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-----c
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----N  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~  593 (813)
                      +.+.+.||+|++|.||+|...   ..+..++||++....  ....+.+.+|+.++++++|+||+++++++....     .
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~   78 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDK---RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND   78 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeC---CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence            567789999999999999874   346789999987643  334467889999999999999999999987765     7


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+. ++|.+++.....+++..++.++.||++||+|||.   .+|+|+||||+|||++.++.++|+|||++....
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD  154 (330)
T ss_pred             eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence            899999998 4899998877789999999999999999999995   599999999999999999999999999998765


Q ss_pred             cCccc-ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc-------
Q 045343          674 LNQSK-AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR-------  744 (813)
Q Consensus       674 ~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-------  744 (813)
                      ..... .......++..|+|||.+.+. .++.++|+||||+++++|++|+.||......+...   .......       
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~  231 (330)
T cd07834         155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN---LIVEVLGTPSEEDL  231 (330)
T ss_pred             ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH---HHHHhcCCCChhHh
Confidence            44210 112334578899999999887 78999999999999999999999997654322111   0111100       


Q ss_pred             ----cCcccccccc-cccc-----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCc
Q 045343          745 ----NEKLDDLVEG-DMEA-----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVV  797 (813)
Q Consensus       745 ----~~~~~~~~~~-~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~  797 (813)
                          .......+.. ....     .........+.+++.+||+.+|.+||++.+++++  ++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence                0000000000 0000     0011235678999999999999999999999986  55544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.9e-31  Score=288.45  Aligned_cols=250  Identities=23%  Similarity=0.340  Sum_probs=206.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...|.+.+.||+|.|++|..+....   .+..||||.+++....  ....+.+|+++|..++|||||+++.+.+....++
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~---t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHIL---TGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecC---CCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            3446677899999999999998864   5778999998764322  2234789999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+.+|.+.++|..+.+..+.....++.|+..+++|||.   ..|+|||||++||||+.+.++||+|||++..+...
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG  208 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeeccc
Confidence            999999999999999998888889999999999999999994   59999999999999999999999999999988744


Q ss_pred             cccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..   ....+|++.|.|||+..+..+ .+++|+||+|++||-|++|..||++..-.+               .-...+..
T Consensus       209 ~~---lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~---------------Lr~rvl~g  270 (596)
T KOG0586|consen  209 LM---LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE---------------LRPRVLRG  270 (596)
T ss_pred             cc---ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc---------------ccchheee
Confidence            32   456789999999999998876 578999999999999999999998543211               01112222


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .++....  ...++.++++++|..+|.+|++++++.+.-
T Consensus       271 k~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~  307 (596)
T KOG0586|consen  271 KYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDR  307 (596)
T ss_pred             eecccce--eechhHHHHHHhhccCccccCCHHHhhhhc
Confidence            2222222  245677899999999999999999998653

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=278.70  Aligned_cols=259  Identities=25%  Similarity=0.313  Sum_probs=192.5

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeecc---ccCCcceEEeEeecCCc---
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQT---HHKNLVRLLGFCDEGQN---  593 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~---  593 (813)
                      ++.+.||+|+||.||+|....   .+..+|||+++.....  ....+.+|+.++.++   +|+||+++++++...+.   
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLN---TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             eEEEEecccCceEEEEEEECC---CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            466889999999999999842   4678999998643221  123466677766655   59999999999987776   


Q ss_pred             --eEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          594 --RLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       594 --~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                        .+++|||+.+ +|.+++...  ..+++..++.++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||++
T Consensus        79 ~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~  154 (287)
T cd07838          79 LKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLA  154 (287)
T ss_pred             ceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcc
Confidence              8999999975 788888654  358999999999999999999995   49999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc-
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL-  748 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~-  748 (813)
                      ........   .....++..|+|||.+.+..++.++|+||||+++|||++|+.||......+..  ............. 
T Consensus       155 ~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  229 (287)
T cd07838         155 RIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQL--DKIFDVIGLPSEEE  229 (287)
T ss_pred             eeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHH--HHHHHHcCCCChHh
Confidence            87654322   12334788999999999888999999999999999999999998765432211  1111000000000 


Q ss_pred             --------ccccccccc---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 --------DDLVEGDME---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 --------~~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                              .........   .....+....+.+++.+||+.||.+||++.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                    000000000   00111345677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=5.8e-31  Score=275.76  Aligned_cols=248  Identities=26%  Similarity=0.394  Sum_probs=201.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|+||.||++...   .++..+++|++.....  ...+++.+|++++++++|+|++++++.+..+...++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~   78 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRK---SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVM   78 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEc---CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEE
Confidence            456788999999999999874   2567899999875432  34556889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||+++++|.+++...    ..+++..+..++.+++.||.|||+.   +++|+||+|+||++++++.++|+|||++.....
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215          79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            999999999999763    6789999999999999999999954   999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ...  ......+++.|+|||.+....++.++|+||+|+++++|++|+.|+.......   +   .... .......+   
T Consensus       156 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~---~~~~-~~~~~~~~---  223 (258)
T cd08215         156 TVD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---L---ALKI-LKGQYPPI---  223 (258)
T ss_pred             Ccc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---H---HHHH-hcCCCCCC---
Confidence            431  1233468889999999988889999999999999999999999986543211   1   1111 11111111   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .......+.+++.+||+.+|.+||++.|++++
T Consensus       224 ------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         224 ------PSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             ------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                  11335678899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=4.9e-31  Score=283.16  Aligned_cols=252  Identities=24%  Similarity=0.378  Sum_probs=191.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.+.||+|+||.||+|...   ..+..+|||.++... .....++..|+.++.+.. |+||+++++++.++...++|
T Consensus        16 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          16 DLENLGEIGSGTCGQVYKMRFK---KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             hheeeeEeeccCCeEEEEEEEC---CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            3567789999999999999874   246789999987532 223345666777666664 99999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+.+ +|.+++.. ...+++..+..++.||++||+|||+  ..+|+||||+|+||++++++.+||+|||++..+....
T Consensus        93 ~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~  169 (296)
T cd06618          93 MELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK  169 (296)
T ss_pred             eeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence            999854 66666654 4578899999999999999999995  2489999999999999999999999999998764332


Q ss_pred             ccceeecccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      .   .....++..|+|||.+.+..    ++.++||||||+++|||++|+.||.....+. ..+.    ..... ....+ 
T Consensus       170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~----~~~~~-~~~~~-  239 (296)
T cd06618         170 A---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLT----KILQE-EPPSL-  239 (296)
T ss_pred             c---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHH----HHhcC-CCCCC-
Confidence            2   12234778999999987654    7889999999999999999999996432211 1110    11111 00000 


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                          .  ......+++.+++.+||+.||.+||++.+++++-
T Consensus       240 ----~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         240 ----P--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             ----C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence                0  0112356789999999999999999999998763

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=8.9e-31  Score=283.44  Aligned_cols=244  Identities=26%  Similarity=0.328  Sum_probs=190.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +...++||+|+||.||+|...   ..+..+++|++.....   ...+.+.+|++++++++|+|++++++++.+.+..++|
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~---~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNS---HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             hhcceeeccCCCeEEEEEEEC---CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            334567999999999999864   3567899999864322   2234578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+. ++|.+++.. ...+++..+..++.||+.+|.|||+   .+++|+||+|+||+++.++.+||+|||++.....  
T Consensus       100 ~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--  173 (313)
T cd06633         100 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--  173 (313)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence            99996 567676654 4568999999999999999999995   4999999999999999999999999999864322  


Q ss_pred             ccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                          .....++..|+|||++.   ...++.++||||||+++|||++|..|+.........      ...... .....  
T Consensus       174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~~-~~~~~--  240 (313)
T cd06633         174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQN-DSPTL--  240 (313)
T ss_pred             ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhc-CCCCC--
Confidence                22346888999999984   456788999999999999999999998654321111      000000 01110  


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ........+.+++.+||+.+|.+||++.+++++
T Consensus       241 ------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         241 ------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             ------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  111234568899999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=9.4e-31  Score=278.28  Aligned_cols=243  Identities=24%  Similarity=0.281  Sum_probs=187.9

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheee---eeeccccCCcceEEeEeecCCceEEEEe
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVV---VIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .||+|+||.||++...   ..++.||||.+......   ....+..|..   .++...|+||+++++++.+.+..++|+|
T Consensus         1 ~ig~g~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEe---cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence            4899999999999864   35678999988643211   1122334433   3444579999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.....+++..+..++.|+++||.|||+   .+|+|+||||+||+++.++.+||+|||++.......   
T Consensus        78 ~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---  151 (278)
T cd05606          78 LMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---  151 (278)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence            99999999999887889999999999999999999995   499999999999999999999999999987654321   


Q ss_pred             eeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                       .....|+..|+|||.+.+. .++.++||||||+++|||++|+.||............    ....      .....+  
T Consensus       152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~------~~~~~~--  218 (278)
T cd05606         152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTL------TMAVEL--  218 (278)
T ss_pred             -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH----HHhh------ccCCCC--
Confidence             2234689999999998754 6889999999999999999999999754322111110    0000      000111  


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                        ....+..+.+++.+|++.+|.+||     ++.+++++
T Consensus       219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence              112357788999999999999999     99999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=1.1e-30  Score=282.98  Aligned_cols=260  Identities=17%  Similarity=0.193  Sum_probs=191.1

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.+.+|.|+++.||++..     ++..+|||++...  .....+.+..|++++++++|+||+++++++.+.+..+++|||
T Consensus         6 i~~~~~~~~~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   80 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-----TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPL   80 (314)
T ss_pred             hhHhhcCCceEEEEEecC-----CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEec
Confidence            344556666666666543     6789999998653  233446789999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          601 LNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       601 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      +++++|.+++...  ..+++.....++.|+++||.|||+   .+|+|+||||+||+++.++.+||+|||.+.........
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence            9999999999753  457888999999999999999995   49999999999999999999999999988755322111


Q ss_pred             -----ceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhh----cc--
Q 045343          679 -----AIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY----RN--  745 (813)
Q Consensus       679 -----~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~----~~--  745 (813)
                           .......++..|+|||++..  ..++.++||||||++++||++|+.||.......  .+.+......    ..  
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~  235 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKST  235 (314)
T ss_pred             ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCc
Confidence                 00122346778999999866  357889999999999999999999997543211  1111000000    00  


Q ss_pred             -----Ccccc----cccc----cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 -----EKLDD----LVEG----DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 -----~~~~~----~~~~----~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .....    ..++    .............+.+++.+||+.||++|||+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence                 00000    0000    01111122345678899999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=4.1e-31  Score=280.88  Aligned_cols=249  Identities=24%  Similarity=0.299  Sum_probs=200.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l  596 (813)
                      |.+.+.||+|+||.||++...   .++..+++|.+...   .....+.+.+|++++++++ |+||+++++++..++..++
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEK---ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEc---CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence            567789999999999999874   36778999988642   1233456888999999998 9999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..++.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence            99999999999999888889999999999999999999995   499999999999999999999999999998765332


Q ss_pred             cc------------------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHH
Q 045343          677 SK------------------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW  738 (813)
Q Consensus       677 ~~------------------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~  738 (813)
                      ..                  .......++..|+|||.......+.++||||||++++++++|+.||.......  .+ . 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~-~-  232 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--TF-Q-  232 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--HH-H-
Confidence            11                  11223457889999999988889999999999999999999999997543211  00 0 


Q ss_pred             HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHH
Q 045343          739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM----KKVLQM  792 (813)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~~  792 (813)
                        ...         ....  .......+.+.+++.+||+.+|.+||++    ++++++
T Consensus       233 --~~~---------~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         233 --KIL---------KLEY--SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             --HHH---------hcCC--CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence              000         0000  0111235778999999999999999999    777653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=291.59  Aligned_cols=200  Identities=29%  Similarity=0.444  Sum_probs=171.6

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-chhhhheeeeeeccccCCcceEEeEeecCC------ce
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ------NR  594 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------~~  594 (813)
                      ...+.||+|+||.||+|...   +.|+.||||.++...... .+...+|+++|++++|+|||++++.-++..      ..
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnk---etG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNK---ETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eehhhhcCCccceeeeeccc---ccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            34578999999999999863   578999999997643322 345788999999999999999999876544      56


Q ss_pred             EEEEeecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--C--CCCEEEeecc
Q 045343          595 LLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--D--YYNARISDFG  667 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--~--~~~~kl~DfG  667 (813)
                      .+|||||.+|||...|...   ..+++.+.+.++.+++.||.|||++   +|+||||||.||++-  .  .-..||+|||
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG  169 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG  169 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence            8999999999999999753   5789999999999999999999976   999999999999993  2  3347999999


Q ss_pred             CccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                      .|+.+..+.   .....+||..|++||.+.. +.++..+|.|||||++||.+||..||....+.
T Consensus       170 ~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  170 AARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             ccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            999887554   2567889999999999985 78899999999999999999999999876554

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=9.1e-31  Score=282.91  Aligned_cols=267  Identities=23%  Similarity=0.263  Sum_probs=191.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCC----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----  592 (813)
                      ..+.+.++||+|+||.||+|...   .++..++||++......  ....+.+|++++++++|+||+++++++.+..    
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQI---KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEEC---CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence            34667789999999999999874   35678999988643222  2345778999999999999999999875433    


Q ss_pred             ----ceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          593 ----NRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       593 ----~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                          ..++|+||+.+ +|...+.. ...+++..+..++.|+++||.|||.   .+|+|+||||+||++++++.+||+|||
T Consensus        85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence                46999999876 56665544 4578999999999999999999995   599999999999999999999999999


Q ss_pred             CccccccCcccc---------eeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHH
Q 045343          668 LAKLLTLNQSKA---------IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD  737 (813)
Q Consensus       668 la~~~~~~~~~~---------~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~  737 (813)
                      +++.........         ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||.............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~  240 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF  240 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            998654322111         01223568889999987654 57899999999999999999999997544322111100


Q ss_pred             HHHHhhccC------cccccc----cccccc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 WAFDCYRNE------KLDDLV----EGDMEA---LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ~~~~~~~~~------~~~~~~----~~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .........      .+....    ......   .......+.+.+++.+||+.||.+|||+.|++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            000000000      000000    000000   0001223678899999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=260.50  Aligned_cols=248  Identities=23%  Similarity=0.371  Sum_probs=191.9

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEee
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +...||.|..|.|+|....   ..+..+|||.+... ..+..+++...+.++.+-+ +|.||+.+|+|..+...++.||.
T Consensus        96 ~l~dlGsGtcG~V~k~~~r---s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFR---STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             hHHhhcCCCccceEEEEEc---ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            4578999999999999885   46789999998653 2334456777777776654 89999999999999999999998


Q ss_pred             cCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |.- .++.++.. ...+++...-++...+++||.||.+  ..+|+|||+||+|||+|+.|++|++|||++-++-....  
T Consensus       173 Ms~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--  247 (391)
T KOG0983|consen  173 MST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--  247 (391)
T ss_pred             HHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccc--
Confidence            854 34444433 3557888888999999999999986  57999999999999999999999999999987754332  


Q ss_pred             eeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                       .+...|-+.|||||.+.-   .+|+-++||||||+.|+||.||..||.....+-.. +..    .+.++  .    +.+
T Consensus       248 -htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~-ltk----vln~e--P----P~L  315 (391)
T KOG0983|consen  248 -HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV-LTK----VLNEE--P----PLL  315 (391)
T ss_pred             -cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH-HHH----HHhcC--C----CCC
Confidence             344568889999999854   46888999999999999999999999865443211 111    11110  1    111


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  ....+..+.+++..||++|+.+||...+++++
T Consensus       316 ~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  316 PG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             Cc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            11  12256788999999999999999999998865

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-30  Score=276.90  Aligned_cols=261  Identities=26%  Similarity=0.341  Sum_probs=197.2

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.||+|++|.||+|+..   ..+..+++|.+....  ....+.+..|+.++++++|+||+++++++.+....++|+|
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   78 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDK---KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFE   78 (282)
T ss_pred             eeehcccccCcceEEEeeec---CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence            45678999999999999875   346789999987643  2234567889999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |++ ++|.+++... ..+++..+.+++.|+++||.|||+.   +|+|+||+|+||++++++.++|+|||+++........
T Consensus        79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT  154 (282)
T ss_pred             CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence            998 5899999776 5789999999999999999999964   9999999999999999999999999999876543221


Q ss_pred             ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHH-------HHHhhc-----
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDW-------AFDCYR-----  744 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~-------~~~~~~-----  744 (813)
                        .....++..|+|||.+.+. .++.++||||||++++||++|+.||......+.. .+...       .+....     
T Consensus       155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T cd07829         155 --YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY  232 (282)
T ss_pred             --cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence              1223457789999998776 7899999999999999999999999754432111 00000       000000     


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ............. .........+.+++..||+.+|++||++.+++.+
T Consensus       233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         233 KPTFPKFPPKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccccCccchH-HhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0000000000000 0001225678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=9.4e-31  Score=275.25  Aligned_cols=250  Identities=22%  Similarity=0.308  Sum_probs=190.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.++||+|+||.||++...........+++|.....  ......++..|+.++++++||||+++++++.+.+..++|+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            56778999999999999987543222223333333221  1122335677889999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||+++++|.+++..    ...+++..++.++.|+++||.|||+   .+++|+||||+||++++ +.+||+|||+++....
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~  157 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG  157 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecCC
Confidence            99999999998853    3568999999999999999999995   59999999999999976 4699999999987643


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....  .....++..|+|||.+.+..++.++|+||||+++++|++|..||.......      ...... .....     
T Consensus       158 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~~~~~-~~~~~-----  223 (260)
T cd08222         158 SCDL--ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VVLRIV-EGPTP-----  223 (260)
T ss_pred             Cccc--ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHH-cCCCC-----
Confidence            3221  223457889999999988888999999999999999999999986432111      000100 01000     


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .    ........+.+++.+||+.+|++||++.|++++
T Consensus       224 ~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         224 S----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             C----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            0    112345688899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=1.4e-30  Score=284.39  Aligned_cols=266  Identities=23%  Similarity=0.292  Sum_probs=192.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc-ccCCcceEEeEeecC----Cc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG----QN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~----~~  593 (813)
                      +.+.+.||+|+||.||++..... ..+..+|||++.....  ...+.+.+|+.+++++ +|+||+++++++...    ..
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAET-SEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCC-CcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            45678999999999999987532 1267899999864322  1235678899999998 599999999976432    35


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++++||+. ++|.+++.....+++..+..++.||++||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGFS  156 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence            678888876 6899999888889999999999999999999995   499999999999999999999999999998765


Q ss_pred             cCccc--ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHh
Q 045343          674 LNQSK--AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDC  742 (813)
Q Consensus       674 ~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~  742 (813)
                      .....  .......|+..|+|||.+.+ ..++.++||||||+++++|++|+.||...............        ...
T Consensus       157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (332)
T cd07857         157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR  236 (332)
T ss_pred             cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            33221  11223568999999998765 46889999999999999999999999754322111000000        000


Q ss_pred             hccCcc-------cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRNEKL-------DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.....       .......... ........+.+++.+||+.||.+|||+.+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         237 IGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             hhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            000000       0000000000 001124678899999999999999999998743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=1.1e-30  Score=286.21  Aligned_cols=266  Identities=23%  Similarity=0.267  Sum_probs=191.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC-------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-------  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-------  591 (813)
                      ..+.+.+.||+|+||.||+|...   ..+..|++|++........+.+.+|++++++++|+||+++++++...       
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~---~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDS---DCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEEC---CCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            34667789999999999999874   35778999998765555556788999999999999999999876543       


Q ss_pred             -------CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEE
Q 045343          592 -------QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI  663 (813)
Q Consensus       592 -------~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl  663 (813)
                             ...++|+||++ ++|.+++.. ..+++.....++.||++||.|||+   .+|+||||||+||+++ ++..+||
T Consensus        82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl  156 (342)
T cd07854          82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI  156 (342)
T ss_pred             cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence                   34789999997 588887754 357899999999999999999995   4999999999999997 5567899


Q ss_pred             eeccCccccccCcccc-eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          664 SDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      +|||+++.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+..........
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~  236 (342)
T cd07854         157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP  236 (342)
T ss_pred             CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            9999998654321111 1122357889999998754 4678899999999999999999999975433111100000000


Q ss_pred             hhccCc-------ccc-ccccccccc-----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          742 CYRNEK-------LDD-LVEGDMEAL-----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       742 ~~~~~~-------~~~-~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....+.       ... .........     ........+.+++.+||+.||.+|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            000000       000 000000000     001234678899999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=3.5e-31  Score=303.77  Aligned_cols=247  Identities=28%  Similarity=0.380  Sum_probs=183.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEee--------------
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCD--------------  589 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--------------  589 (813)
                      +.||+||||.|||+..+   -+++.+|||++.... ......+.+|+.++++|+|||||+++....              
T Consensus       485 ~lLGkGGFG~VvkVRNK---lDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~  561 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNK---LDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS  561 (1351)
T ss_pred             HHhcCCCCceEEEEeec---ccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence            57999999999999874   588999999997542 233456889999999999999999986400              


Q ss_pred             --------------------------------------------------------------------------------
Q 045343          590 --------------------------------------------------------------------------------  589 (813)
Q Consensus       590 --------------------------------------------------------------------------------  589 (813)
                                                                                                      
T Consensus       562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~  641 (1351)
T KOG1035|consen  562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI  641 (1351)
T ss_pred             chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence                                                                                            


Q ss_pred             ------------------cC-------CceEEEEeecCCCchhhhhhccCCC-CHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 045343          590 ------------------EG-------QNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSAQI  643 (813)
Q Consensus       590 ------------------~~-------~~~~lV~e~~~~gsL~~~l~~~~~l-~~~~~~~i~~~ia~gl~yLH~~~~~~i  643 (813)
                                        +.       ..+||=||||+...|.+++..+... .....++++.+|++||+|+|+.   +|
T Consensus       642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---gi  718 (1351)
T KOG1035|consen  642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GI  718 (1351)
T ss_pred             cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---ce
Confidence                              00       1236778888888888887666544 4667889999999999999954   89


Q ss_pred             eeCCCCCCcEEEcCCCCEEEeeccCccccc----------------cCcccceeecccccccccCcccccCC---CCCCc
Q 045343          644 IHCDIKPQNILLDDYYNARISDFGLAKLLT----------------LNQSKAIRTAIRGTKGYVAPEWFRNS---TITAK  704 (813)
Q Consensus       644 vH~dlk~~NIll~~~~~~kl~DfGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~k  704 (813)
                      |||||||.||+||++..+||+|||+|....                ........+..+||.-|+|||++.+.   +|+.|
T Consensus       719 IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K  798 (1351)
T KOG1035|consen  719 IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK  798 (1351)
T ss_pred             eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence            999999999999999999999999998721                00111124567899999999999765   49999


Q ss_pred             cchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCC
Q 045343          705 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP  784 (813)
Q Consensus       705 ~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  784 (813)
                      +|+||+|||++||+.   ||...++.. .     +...++.+.+..-  +    ....+....-..+++++++.||.+||
T Consensus       799 iDmYSLGIVlFEM~y---PF~TsMERa-~-----iL~~LR~g~iP~~--~----~f~~~~~~~e~slI~~Ll~hdP~kRP  863 (1351)
T KOG1035|consen  799 IDMYSLGIVLFEMLY---PFGTSMERA-S-----ILTNLRKGSIPEP--A----DFFDPEHPEEASLIRWLLSHDPSKRP  863 (1351)
T ss_pred             hhhHHHHHHHHHHhc---cCCchHHHH-H-----HHHhcccCCCCCC--c----ccccccchHHHHHHHHHhcCCCccCC
Confidence            999999999999986   465443211 1     1122222222221  0    11122344556899999999999999


Q ss_pred             CHHHHHHH
Q 045343          785 TMKKVLQM  792 (813)
Q Consensus       785 t~~evl~~  792 (813)
                      |+.|+++.
T Consensus       864 tA~eLL~s  871 (1351)
T KOG1035|consen  864 TATELLNS  871 (1351)
T ss_pred             CHHHHhhc
Confidence            99999864

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3e-31  Score=263.96  Aligned_cols=246  Identities=24%  Similarity=0.262  Sum_probs=197.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccc---hhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+|.+.||+|.||.|.++.-+   ..++.+|+|++++..--..   ..-..|-++|+..+||.+..|.-.|...++++.|
T Consensus       170 FdfLKvLGkGTFGKVIL~rEK---at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  170 FDFLKVLGKGTFGKVILCREK---ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             hhHHHHhcCCccceEEEEeec---ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            356789999999999987663   5778999999986432222   2345678899999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+.+|.|.-+|.....+++...+-+-..|+.||.|||+   .+||+||||.+|.|||.+|++||+|||+.+..-....
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccccc
Confidence            9999999999999999999999888899999999999994   5999999999999999999999999999876433222


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                        ....++||+.|+|||++....|...+|.|.+||+||||++|+.||.....+.-..+       +.        -..++
T Consensus       324 --t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL-------Il--------~ed~k  386 (516)
T KOG0690|consen  324 --TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL-------IL--------MEDLK  386 (516)
T ss_pred             --eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH-------HH--------hhhcc
Confidence              25678999999999999999999999999999999999999999985443221111       11        11111


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQ  791 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~  791 (813)
                      .  +.....+...|+...|.+||.+|.     .+.||.+
T Consensus       387 F--Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  387 F--PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             C--CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence            1  112345667788888999999996     3455544

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.3e-30  Score=283.82  Aligned_cols=266  Identities=25%  Similarity=0.297  Sum_probs=194.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  592 (813)
                      .|.+.+.||+|+||.||++...   .++..||||++....  ....+.+.+|+.++++++|+||+++++++..+.     
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDR---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEEC---CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            3556788999999999999864   357789999985422  122346788999999999999999999986554     


Q ss_pred             -ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          593 -NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                       ..++|+||+ +++|.+++.. ..+++..++.++.||++||+|||+   .+|+||||||+||+++.++.+||+|||++..
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~  167 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ  167 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence             358999998 7788888764 468899999999999999999995   5999999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHHH-------HHHh
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW-------AFDC  742 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~~-------~~~~  742 (813)
                      ....     .....++..|+|||.+.+ ..++.++|+||||+++++|++|+.||........ ......       ....
T Consensus       168 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07880         168 TDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK  242 (343)
T ss_pred             cccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence            5432     223457889999999876 4578899999999999999999999975432111 000000       0000


Q ss_pred             hccCcccc-------cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH--HHHhcCcCC
Q 045343          743 YRNEKLDD-------LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL--QMLEGVVEV  799 (813)
Q Consensus       743 ~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl--~~L~~~~~~  799 (813)
                      +.......       .....+. .........+.+++.+|++.||.+|||+.+++  ..++...+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         243 LQSEDAKNYVKKLPRFRKKDFR-SLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             hcchhHHHHHHhccccCcchHH-HhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence            00000000       0000000 00112345688999999999999999999999  444554433

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.4e-32  Score=311.07  Aligned_cols=248  Identities=28%  Similarity=0.385  Sum_probs=201.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      ...||.|.||.||-+...   .+|...|+|-++...  ....+...+|+.++..++|||+|+.+|+-.+.+..+|.||||
T Consensus      1240 g~~Ig~G~fG~VYtavN~---~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNL---DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             ccccCCcceeeeEEeecC---CccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            357999999999999875   467788999776432  334566889999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc--c
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK--A  679 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~--~  679 (813)
                      ++|+|.+.+......++.....+..|++.|++|||++   +||||||||.||+|+.+|.+|++|||.|+.+.++...  .
T Consensus      1317 ~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred             ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCCH
Confidence            9999999999888888888888999999999999965   9999999999999999999999999999988765311  1


Q ss_pred             eeecccccccccCcccccCCC---CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH-hhccCccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD-CYRNEKLDDLVEGD  755 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~---~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~  755 (813)
                      .....+||+-|||||.+.+.+   ...+.||||+|||++||+||++|+.....+       |+.- .+..+...++.+  
T Consensus      1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~Pq~P~-- 1464 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHKPQIPE-- 1464 (1509)
T ss_pred             HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCCCCCch--
Confidence            123567999999999997643   566899999999999999999999744321       2211 122222222211  


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                             ....+-.+++..||+.||.+|-++.|++++-
T Consensus      1465 -------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1465 -------RLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             -------hhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence                   2456778999999999999998888887763

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.1e-30  Score=284.46  Aligned_cols=259  Identities=25%  Similarity=0.301  Sum_probs=189.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC------C
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------Q  592 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~  592 (813)
                      +.+.+.||+|+||.||+|...   .++..||||+++...  ....+.+.+|+.++++++|+||+++++++...      .
T Consensus        19 y~~~~~lg~G~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          19 YQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             eEEEEEeeecCCeEEEEEEEc---CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence            445678999999999999864   356789999986532  22245678899999999999999999988543      3


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..+++++++ +++|.+++... .+++..+..++.|+++||+|||+   .+|+||||||+||++++++.+||+|||+++..
T Consensus        96 ~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             cEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence            467788876 78998877654 58999999999999999999995   49999999999999999999999999998765


Q ss_pred             ccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHH-------HHHhh
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDW-------AFDCY  743 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~-------~~~~~  743 (813)
                      ...     .....++..|+|||.+.+ ..++.++||||||++++||++|+.||.......... +...       ....+
T Consensus       171 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T cd07877         171 DDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI  245 (345)
T ss_pred             ccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            322     223457889999998866 467889999999999999999999996543221110 0000       00000


Q ss_pred             ccCccc-------ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          744 RNEKLD-------DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       744 ~~~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ......       ........ .........+.+++.+|++.||.+||++.+++++=
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  301 (345)
T cd07877         246 SSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  301 (345)
T ss_pred             ccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence            000000       00000000 00001345688999999999999999999999663

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=6.1e-31  Score=259.75  Aligned_cols=259  Identities=22%  Similarity=0.234  Sum_probs=198.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeec----CCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE----GQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~~~lV~e  599 (813)
                      ++||-|-.|.|-.+..+   ..+...|+|+|.+.     ...++|+++--+. .|+|||.++++++.    ...+++|||
T Consensus        68 qvLG~GinGkV~~C~~k---~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE  139 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHK---RTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME  139 (400)
T ss_pred             hhhccccCCceEEEEec---cchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence            57999999999988775   35667899998643     2446677665444 59999999998853    346789999


Q ss_pred             ecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCcccccc
Q 045343          600 FLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~~~~  674 (813)
                      .|+||.|...++.+.  .++++++..|+.||+.|+.|||   +.+|.||||||+|+|..   .+..+||+|||+|+.-..
T Consensus       140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~  216 (400)
T KOG0604|consen  140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE  216 (400)
T ss_pred             cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence            999999999998764  5899999999999999999999   56999999999999996   466799999999987653


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ...   ....+-|+.|.|||++...+++...|+||+||++|-||+|.+||...-+..           +..+.-.++..+
T Consensus       217 ~~~---L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-----------ispgMk~rI~~g  282 (400)
T KOG0604|consen  217 PGD---LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----------ISPGMKRRIRTG  282 (400)
T ss_pred             Ccc---ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----------CChhHHhHhhcc
Confidence            222   344567999999999999999999999999999999999999998544311           011111122222


Q ss_pred             cccccc--cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCCCCCC
Q 045343          755 DMEALN--DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPF  808 (813)
Q Consensus       755 ~~~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~p~~~  808 (813)
                      ....+.  -...++...++++.+|..+|.+|.|+.|++.+=--....-.|..|..-
T Consensus       283 qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t  338 (400)
T KOG0604|consen  283 QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLST  338 (400)
T ss_pred             CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchh
Confidence            222111  124577888999999999999999999999775433344445555443

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-30  Score=268.78  Aligned_cols=237  Identities=28%  Similarity=0.309  Sum_probs=192.7

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ||+|+||.||++...   .++..+++|.+......   ....+..|+.++++++|+||+++++.+..+...++||||+++
T Consensus         1 lg~G~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   77 (250)
T cd05123           1 LGKGSFGKVLLVRKK---DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPG   77 (250)
T ss_pred             CCCCCceEEEEEEEC---CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCC
Confidence            699999999999874   25678999988653221   344788999999999999999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeec
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      ++|.+++.....+++.....++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||++.........  ...
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~--~~~  152 (250)
T cd05123          78 GELFSHLSKEGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR--TNT  152 (250)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCc--ccC
Confidence            9999999888788999999999999999999995   59999999999999999999999999999876543211  234


Q ss_pred             ccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHH
Q 045343          684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK  763 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (813)
                      ..++..|++||.+.+...+.++|+||||+++|||++|+.||.......   ...   ....         ....  ....
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~---~~~~---------~~~~--~~~~  215 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYE---KILK---------DPLR--FPEF  215 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHH---HHhc---------CCCC--CCCC
Confidence            567889999999988888999999999999999999999996543211   100   1100         0010  1112


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHH
Q 045343          764 CVEKLVMVSIWCIQEDPSLRPTMKK  788 (813)
Q Consensus       764 ~~~~l~~l~~~Cl~~dP~~RPt~~e  788 (813)
                      ....+.+++.+||..||++||++.+
T Consensus       216 ~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         216 LSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCHHHHHHHHHHhcCCHhhCCCccc
Confidence            2577889999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-31  Score=271.15  Aligned_cols=266  Identities=25%  Similarity=0.314  Sum_probs=204.1

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccc----cchhhhheeeeeeccccCCcce
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQD----GEKEFKNEVVVIGQTHHKNLVR  583 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~----~~~~~~~E~~~l~~l~h~niv~  583 (813)
                      |.-.-.....|-+...||+|||+.|||+.+.   .+.+.||||+-...   .++    -.+...+|..|-+.|.|+.||+
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl---~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVK  531 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDL---TEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVK  531 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhccc---chhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeee
Confidence            3333344556667788999999999999875   36678999975421   111    1234678999999999999999


Q ss_pred             EEeEee-cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCC
Q 045343          584 LLGFCD-EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYY  659 (813)
Q Consensus       584 l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~  659 (813)
                      +++++. +.+.++-|+||+++.+|+-||+.+...++++.+.|++||+.||.||.+. +++|||-||||.||||.   .-|
T Consensus       532 lYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG  610 (775)
T KOG1151|consen  532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG  610 (775)
T ss_pred             eeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence            999985 5567899999999999999999999999999999999999999999976 88999999999999995   457


Q ss_pred             CEEEeeccCccccccCccc-----ceeecccccccccCcccccC----CCCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          660 NARISDFGLAKLLTLNQSK-----AIRTAIRGTKGYVAPEWFRN----STITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       660 ~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                      .+||.|||+++.+..+...     .......||..|++||++--    .+++.|+||||.|||+|..+.|+.||......
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            8999999999998754332     12344679999999998843    35788999999999999999999999765432


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ....         ....+-..  ..+..+.......+...+|++||+..-++|....++..
T Consensus       691 QdIL---------qeNTIlkA--tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  691 QDIL---------QENTILKA--TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             HHHH---------hhhchhcc--eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            2111         11111110  01112222334567789999999999999998887764

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=3.7e-30  Score=280.28  Aligned_cols=260  Identities=24%  Similarity=0.298  Sum_probs=191.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec-CCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~l  596 (813)
                      .|.+.+.||+|+||.||++...   .++..+|||++....  ....+.+..|+.++++++||||+++++++.. ....++
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQ---LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEEC---CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            3556789999999999999864   367789999875422  2234568889999999999999999998865 567899


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+||+ +++|.+++.. ..+++.....++.|+++||.|||+   .+|+|+||+|+||++++++.++|+|||++...... 
T Consensus        88 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~-  161 (328)
T cd07856          88 VTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ-  161 (328)
T ss_pred             Eeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence            99998 5688888764 356788888999999999999995   59999999999999999999999999998754322 


Q ss_pred             ccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh-hHHHH-------HHhhccCc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI-LTDWA-------FDCYRNEK  747 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~-------~~~~~~~~  747 (813)
                          .....++..|+|||.+.+ ..++.++||||||++++||++|+.||.......... +.+..       ......+.
T Consensus       162 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (328)
T cd07856         162 ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN  237 (328)
T ss_pred             ----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence                123457889999998866 568899999999999999999999996543211110 00000       00000000


Q ss_pred             cccccc-cccccccc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVE-GDMEALND-----IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~-~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..++.. ........     ......+.+++.+||+.+|++||++.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000000 00000000     1234688999999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.5e-30  Score=281.38  Aligned_cols=241  Identities=25%  Similarity=0.313  Sum_probs=196.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..|++...+|.|+|+.|-++...   .+.+..+||++.+.    ..+-.+|+.++.+. +|+||+++.+.+.++.+.++|
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~---~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v  394 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESS---PTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV  394 (612)
T ss_pred             hhhccccccCCCCccceeeeecc---ccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeee
Confidence            34667788999999999998875   35667889988654    33456778777666 699999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE-cCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL-DDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll-~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||.+.++.|.+.+....... ..+..|+.+|+.++.|||.   .+++||||||+|||+ ++.++++|+|||.++....+ 
T Consensus       395 ~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-  469 (612)
T KOG0603|consen  395 MELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-  469 (612)
T ss_pred             ehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence            99999999888887776665 7888899999999999995   499999999999999 58999999999999987655 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          ....+-|..|.|||++....+++++|+||||++||+||+|+.||........      +...+.....        
T Consensus       470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e------i~~~i~~~~~--------  531 (612)
T KOG0603|consen  470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE------IHTRIQMPKF--------  531 (612)
T ss_pred             ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH------HHHhhcCCcc--------
Confidence                1223468899999999999999999999999999999999999975543311      1111111111        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                          ....++...+|+.+||+.||.+||+|.++..+=
T Consensus       532 ----s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~  564 (612)
T KOG0603|consen  532 ----SECVSDEAKDLLQQLLQVDPALRLGADEIGAHP  564 (612)
T ss_pred             ----ccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence                124567889999999999999999999998763

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=266.63  Aligned_cols=246  Identities=26%  Similarity=0.334  Sum_probs=198.3

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeec
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE  590 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  590 (813)
                      -+.....+|..+||+|+||.|-++..   ++....+|||++++..   ..+.+--+.|-++|+.. +-|.++++..++..
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaer---kgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT  421 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAER---KGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT  421 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecc---cCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh
Confidence            34445568999999999999998865   3466789999997642   12222245677777766 57889999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      .++++.||||+.+|+|--++++-.++.+..+.-++..||-||-+||   +.+|++||||..|||||.+|++||+|||+.+
T Consensus       422 mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcK  498 (683)
T KOG0696|consen  422 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  498 (683)
T ss_pred             hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccc
Confidence            9999999999999999999999889999999999999999999999   5699999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .--.+.  ......+||+.|+|||++..++|+..+|.|||||+||||+.|.+||+++.+++-..               .
T Consensus       499 Eni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~---------------a  561 (683)
T KOG0696|consen  499 ENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ---------------A  561 (683)
T ss_pred             ccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH---------------H
Confidence            643322  22456899999999999999999999999999999999999999999776543221               1


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCC
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT  785 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  785 (813)
                      +.+....-  +...+.+...+....|.+.|.+|.-
T Consensus       562 I~ehnvsy--PKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  562 IMEHNVSY--PKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             HHHccCcC--cccccHHHHHHHHHHhhcCCccccC
Confidence            22222221  2234567778888889999999853

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.9e-30  Score=283.10  Aligned_cols=258  Identities=25%  Similarity=0.330  Sum_probs=192.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCc-----
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN-----  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  593 (813)
                      |.+.+.||+|++|.||+|....   .+..+|||++....  ....+.+.+|+.++++++|+||+++++++...+.     
T Consensus        17 y~~~~~ig~g~~g~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          17 YQNLSPVGSGAYGQVCSAFDTK---TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             eEEEEEeccCCceEEEEEEECC---CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            5567899999999999998853   56789999986431  2233557789999999999999999998766554     


Q ss_pred             -eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 -RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 -~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                       .++|+||+ +++|.+++.. ..+++..++.++.|+++||+|||.   .+|+|+||||+||++++++.+||+|||++...
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence             89999998 5699888865 468999999999999999999995   59999999999999999999999999999875


Q ss_pred             ccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHHH-------HHHhh
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW-------AFDCY  743 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~~-------~~~~~  743 (813)
                      ...     .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ..+...       ....+
T Consensus       169 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (343)
T cd07851         169 DDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI  243 (343)
T ss_pred             ccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence            432     223457889999998865 3678899999999999999999999975433211 000000       00000


Q ss_pred             ccCcccccccc-------cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 RNEKLDDLVEG-------DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ~~~~~~~~~~~-------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+..       ..... .....+.+.+++.+||+.+|.+|||+.||+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         244 SSESARNYIQSLPQMPKKDFKEV-FSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             cchhHHHHHHhccccCCCCHHHH-hccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            00000000000       00000 01125678999999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-31  Score=299.52  Aligned_cols=269  Identities=20%  Similarity=0.243  Sum_probs=211.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+++.+.||+|+||.|..+...   ..++.+|.|++.+.   ......-|++|-.+|..-+.+=|+.+.-.|.++..+
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k---~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHK---STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEee---ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence            345667899999999999998875   46789999999763   233344588999999888899999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      |+|||||+||+|-.++....++++..++-++..|.-||.-||   +.|+|||||||.|||||..|++||+|||..-.+..
T Consensus       151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~  227 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA  227 (1317)
T ss_pred             EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence            999999999999999988778999999999999999999999   57999999999999999999999999999988876


Q ss_pred             CcccceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +..-. ....+|||.|++||++..     +.|++.+|.||+||++|||+.|..||..+.-.+      ..........  
T Consensus       228 dG~V~-s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve------TY~KIm~hk~--  298 (1317)
T KOG0612|consen  228 DGTVR-SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE------TYGKIMNHKE--  298 (1317)
T ss_pred             CCcEE-eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH------HHHHHhchhh--
Confidence            54432 456789999999999953     468899999999999999999999998654211      1111111111  


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHH-------hcCcCCCCCCCCCC
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQML-------EGVVEVSLPPNPYP  807 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~~L-------~~~~~~~~p~~p~~  807 (813)
                           .+..+...+.++...+||+..+. +|+.|..   ++++..+-       +.|.+...|-.|..
T Consensus       299 -----~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPev  360 (1317)
T KOG0612|consen  299 -----SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEV  360 (1317)
T ss_pred             -----hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcC
Confidence                 11122223456778888887654 7788887   88888763       44556665555544

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=7.3e-30  Score=264.72  Aligned_cols=221  Identities=21%  Similarity=0.182  Sum_probs=175.9

Q ss_pred             eeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCchhhh
Q 045343          530 GSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF  609 (813)
Q Consensus       530 G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~  609 (813)
                      |.+|.||++...   .+++.+|+|++....     .+..|...+....||||+++++++.+.+..++||||+++|+|.++
T Consensus         4 g~~~~v~~~~~~---~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDT---RTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEc---cCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            889999999874   456789999986532     233344444455799999999999999999999999999999999


Q ss_pred             hhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeeccccccc
Q 045343          610 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG  689 (813)
Q Consensus       610 l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~  689 (813)
                      +.....+++..+..++.|+++||.|||+   .+|+||||||+||+++.++.++++|||.+......     .....++..
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~  147 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENM  147 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcc
Confidence            9877778999999999999999999995   59999999999999999999999999988665432     122345678


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHH
Q 045343          690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV  769 (813)
Q Consensus       690 y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  769 (813)
                      |+|||.+.+..++.++||||+|+++|||++|+.|+.......            ..  ...+   .+    +......+.
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~--~~~~---~~----~~~~~~~~~  206 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NT--HTTL---NI----PEWVSEEAR  206 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------cc--cccc---CC----cccCCHHHH
Confidence            999999988888999999999999999999998765321100            00  0000   00    112346788


Q ss_pred             HHHHHhcccCCCCCCCHH
Q 045343          770 MVSIWCIQEDPSLRPTMK  787 (813)
Q Consensus       770 ~l~~~Cl~~dP~~RPt~~  787 (813)
                      +++.+|++.||.+||++.
T Consensus       207 ~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         207 SLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHHHccCCHHHhcCCC
Confidence            999999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=259.73  Aligned_cols=253  Identities=23%  Similarity=0.317  Sum_probs=200.1

Q ss_pred             ccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeec-CCceEEEEe
Q 045343          524 KEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRLLVYE  599 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~e  599 (813)
                      ...+-+|.||.||+|.+...+  .+.+.|-||.++... +-....+..|..++..+.|||+..+.+++.+ .+..+.+|.
T Consensus       289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~  368 (563)
T KOG1024|consen  289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP  368 (563)
T ss_pred             hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence            446889999999999876432  233456777765432 2223457788888888899999999999855 457899999


Q ss_pred             ecCCCchhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          600 FLNNGTLASFLFG--------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       600 ~~~~gsL~~~l~~--------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ++.-|+|..||..        ...++-.+...++.|++.|++|||.   .+|||.||..+|.+||+..++||+|-.+++.
T Consensus       369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSRD  445 (563)
T KOG1024|consen  369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSRD  445 (563)
T ss_pred             ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhccc
Confidence            9999999999972        1344566677889999999999995   4999999999999999999999999999998


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      +.+.+.............||+||.+.+..++..+|||||||+||||+| |+.|+..-.+.+..                .
T Consensus       446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~----------------~  509 (563)
T KOG1024|consen  446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME----------------H  509 (563)
T ss_pred             cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH----------------H
Confidence            876655443333445678999999999999999999999999999999 88888654443321                1


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .+....+..++.++++++..+|.-||..+|++||++++++.-|.+
T Consensus       510 ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  510 YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            122233444566789999999999999999999999999998865

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.96  E-value=9.9e-31  Score=274.52  Aligned_cols=244  Identities=27%  Similarity=0.399  Sum_probs=195.2

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      .|.||.|.||+||-|+..   ..|+.||||.+.+.  ....+.++++|+.||++++||.||.+.-.|+..++.++|||-+
T Consensus       569 devLGSGQFG~VYgg~hR---ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl  645 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHR---KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL  645 (888)
T ss_pred             HhhccCCcceeeecceec---ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh
Confidence            368999999999999885   57889999999764  2345577999999999999999999999999999999999999


Q ss_pred             CCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCccccccCcc
Q 045343          602 NNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       602 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla~~~~~~~~  677 (813)
                      .+.=|+-+|.. ..++++..-.-++.||+.||.|||.   ++|+|+||||+||||..   --++||+|||.|+.+.....
T Consensus       646 ~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  646 HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence            77666666654 4678888888899999999999995   59999999999999964   35799999999999875433


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         ....+||+.|+|||++.++.|...-|+||.|||+|--|+|..||..+.+-  ...++.+.-++....          
T Consensus       723 ---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQNAaFMyPp~P----------  787 (888)
T KOG4236|consen  723 ---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQNAAFMYPPNP----------  787 (888)
T ss_pred             ---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch--hHHhhccccccCCCc----------
Confidence               45678999999999999999999999999999999999999999744321  111111111111111          


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                         -.+.....+++|...||..-.+|-+.+..+.
T Consensus       788 ---W~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  788 ---WSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             ---hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence               1234566778888888888888888876553

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=4.3e-31  Score=256.76  Aligned_cols=261  Identities=24%  Similarity=0.334  Sum_probs=196.3

Q ss_pred             CCCCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeec-cccCCcceEE
Q 045343          508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQ-THHKNLVRLL  585 (813)
Q Consensus       508 ~~~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~-l~h~niv~l~  585 (813)
                      +-.|+-.+|+..     .+||.|+||+|+|-..   ++.++..|||+++.... ...+++..|.++..+ -+.||||+++
T Consensus        58 ~~~F~~~~Lqdl-----g~iG~G~fG~V~KM~h---k~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfy  129 (361)
T KOG1006|consen   58 LHTFTSDNLQDL-----GEIGNGAFGTVNKMLH---KPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFY  129 (361)
T ss_pred             ccccccchHHHH-----HHhcCCcchhhhhhhc---CccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence            344665555543     5799999999999876   46789999999986544 445678888776544 4799999999


Q ss_pred             eEeecCCceEEEEeecCCCchhhhh---h--ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          586 GFCDEGQNRLLVYEFLNNGTLASFL---F--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       586 g~~~~~~~~~lV~e~~~~gsL~~~l---~--~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      |.+..+...++.||.|+- ||+.+-   +  .+..+++...-+|....++||.||.+  ...|+|||+||+||||+..|.
T Consensus       130 Ga~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~  206 (361)
T KOG1006|consen  130 GALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGD  206 (361)
T ss_pred             hhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCC
Confidence            999999999999999853 555443   2  34678888888999999999999997  478999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW  738 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~  738 (813)
                      +||+|||+...+..+-.   .+.-.|-..|||||.+...  .++-++||||||+.|+|+.||+.|+..-..     +.+.
T Consensus       207 vKLCDFGIcGqLv~SiA---kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeq  278 (361)
T KOG1006|consen  207 VKLCDFGICGQLVDSIA---KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQ  278 (361)
T ss_pred             EeeecccchHhHHHHHH---hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHH
Confidence            99999999877654322   2334577789999999643  488999999999999999999999863221     1111


Q ss_pred             HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.... .+.-..+..    .....+....+..++..|+.+|..+||...++.++
T Consensus       279 l~~Vv-~gdpp~l~~----~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  279 LCQVV-IGDPPILLF----DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHH-cCCCCeecC----cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            11111 111111111    11123567889999999999999999999988753

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.96  E-value=2.5e-29  Score=297.11  Aligned_cols=145  Identities=27%  Similarity=0.352  Sum_probs=128.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.++||+|+||.||+|...   ..++.||||+++....   .....+..|+.++..++|+||+++++.+......+|
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKK---NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence            3567789999999999999874   3577899999865321   123568889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ||||+.+++|.+++.....+++..++.++.||+.||.|||.   .+|+||||||+||||+.++.+||+|||+++
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999999999877788999999999999999999995   499999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-30  Score=263.62  Aligned_cols=270  Identities=22%  Similarity=0.293  Sum_probs=206.3

Q ss_pred             CCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-c-CC----cce
Q 045343          510 CFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-H-KN----LVR  583 (813)
Q Consensus       510 ~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~  583 (813)
                      .+...+.....|.+.+.+|+|.||.|-.+....   .+..||||+++... .-.+..+-|+++++++. + |+    +|.
T Consensus        80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~---~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~  155 (415)
T KOG0671|consen   80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRE---TKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQ  155 (415)
T ss_pred             EEEeccccccceehhhhhcCCcccceEEEeecC---CCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence            455566777888889999999999999988753   46889999998753 23445677999999983 2 22    788


Q ss_pred             EEeEeecCCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC----
Q 045343          584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----  657 (813)
Q Consensus       584 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~----  657 (813)
                      +.+++.-..+.++|+|.+ |-|+.++|..+  ..++...++.|+.|+++++++||+   .+++|-||||+|||+.+    
T Consensus       156 m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~  231 (415)
T KOG0671|consen  156 MRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYF  231 (415)
T ss_pred             eehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceE
Confidence            889999999999999987 55999999876  467889999999999999999995   59999999999999931    


Q ss_pred             ----------------CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 045343          658 ----------------YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR  721 (813)
Q Consensus       658 ----------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~  721 (813)
                                      +..+||+|||.|.......     ..++.|..|.|||++.+-.++.++||||+||||.|+.+|.
T Consensus       232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~  306 (415)
T KOG0671|consen  232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGE  306 (415)
T ss_pred             EEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccc
Confidence                            3468999999998866543     4567899999999999999999999999999999999999


Q ss_pred             cCCCcccchhhhhhHHHHHHhh--------------ccCcc-----------cccccccc----cccccHHHHHHHHHHH
Q 045343          722 KSFDIEMGEEYAILTDWAFDCY--------------RNEKL-----------DDLVEGDM----EALNDIKCVEKLVMVS  772 (813)
Q Consensus       722 ~p~~~~~~~~~~~l~~~~~~~~--------------~~~~~-----------~~~~~~~~----~~~~~~~~~~~l~~l~  772 (813)
                      ..|+.....+...+.+.+....              ..+.+           ....++..    .......+...|++|+
T Consensus       307 ~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl  386 (415)
T KOG0671|consen  307 TLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLL  386 (415)
T ss_pred             eecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHH
Confidence            9998765433222211111100              00000           00111000    0111235567899999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 045343          773 IWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       773 ~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..||..||.+|+|+.|++++
T Consensus       387 ~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  387 RRMLEFDPARRITLREALSH  406 (415)
T ss_pred             HHHHccCccccccHHHHhcC
Confidence            99999999999999999865

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2e-30  Score=250.01  Aligned_cols=267  Identities=21%  Similarity=0.288  Sum_probs=194.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecC------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------  591 (813)
                      +|+-..+||+|.||+||++...   ..++.||+|+.--.  .+.-.....+|+.+|..++|+|++.++..|...      
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~---n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSK---NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhc---CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence            3444468999999999999764   35566888875321  122233567899999999999999999988432      


Q ss_pred             --CceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          592 --QNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       592 --~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                        ...+||++++++ +|.-+|... .+++..++.+++.++..||.|+|.   ..|+|||+|+.|+||+.++.+||+|||+
T Consensus        95 ~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   95 DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccc
Confidence              237999999987 777777765 688999999999999999999995   5999999999999999999999999999


Q ss_pred             ccccccCcc--cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          669 AKLLTLNQS--KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       669 a~~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ++.+.....  ...-+..+-|..|++||.+.+. .++++.|||.-||+|.||.|+.+.+..........+..........
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            987653322  1112345568999999998775 6899999999999999999999988876554433332222111111


Q ss_pred             Ccccc--------------cccccccccc----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          746 EKLDD--------------LVEGDMEALN----DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       746 ~~~~~--------------~~~~~~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      +...+              +.....+...    .-...++.++|+..++..||.+|+++++++.+-
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~  316 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD  316 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence            11111              1111100000    001123677899999999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=1.7e-28  Score=254.09  Aligned_cols=239  Identities=30%  Similarity=0.372  Sum_probs=193.4

Q ss_pred             eeeeEEEEEEeccCCcceEEEEEEeecccccc-chhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCchhhh
Q 045343          531 SFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF  609 (813)
Q Consensus       531 ~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~  609 (813)
                      +||.||+|...   .++..+++|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.++
T Consensus         1 ~~g~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   77 (244)
T smart00220        1 SFGKVYLARDK---KTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL   77 (244)
T ss_pred             CceEEEEEEEC---CCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence            58999999884   346789999997654433 57899999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeeccccccc
Q 045343          610 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG  689 (813)
Q Consensus       610 l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~  689 (813)
                      +.....+++..++.++.++++++.|||+.   +++|+||+|+||++++++.++|+|||.+........   .....++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~  151 (244)
T smart00220       78 LKKRGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL---LTTFVGTPE  151 (244)
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccc---cccccCCcC
Confidence            98766689999999999999999999964   999999999999999999999999999988764321   234557889


Q ss_pred             ccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHH
Q 045343          690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV  769 (813)
Q Consensus       690 y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  769 (813)
                      |++||.+.....+.++|||+||+++++|++|..|+.......  .+    ............ .      ........+.
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~----~~~~~~~~~~~~-~------~~~~~~~~~~  218 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--EL----FKKIGKPKPPFP-P------PEWKISPEAK  218 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HH----HHHHhccCCCCc-c------ccccCCHHHH
Confidence            999999988888999999999999999999999987532211  11    111111111000 0      0000456889


Q ss_pred             HHHHHhcccCCCCCCCHHHHHH
Q 045343          770 MVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       770 ~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      +++.+|+..+|++||++.++++
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhh
Confidence            9999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=7.8e-29  Score=227.36  Aligned_cols=260  Identities=21%  Similarity=0.289  Sum_probs=192.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      -|+||+|.+|+||||...   ...+.||+|+++...  +.......+|+-+++.++|+|||++++....+..+.||+|||
T Consensus         7 mekigegtygtvfkarn~---~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             HHhhcCCcceeeEecccC---CccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            478999999999999764   467899999986432  233456789999999999999999999999999999999999


Q ss_pred             CCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          602 NNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       602 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      .. +|..+... +..++.+..+.++.|+++||.++|.   ..+.||||||+|.||+.+|++|++|||+++-+.-.-.  .
T Consensus        84 dq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvr--c  157 (292)
T KOG0662|consen   84 DQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--C  157 (292)
T ss_pred             hH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceE--e
Confidence            54 67777654 5678899999999999999999994   5999999999999999999999999999987653321  1


Q ss_pred             eecccccccccCcccccCCC-CCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcc---ccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKL---DDLVEGD  755 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~  755 (813)
                      ....+-|..|.+|+++.+.+ +++..|+||-||++.|+.. |++.|.+....++..-.-+......++..   .++.|..
T Consensus       158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk  237 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK  237 (292)
T ss_pred             eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence            23345788999999998765 7899999999999999987 66666554433332222222222222222   1222211


Q ss_pred             cccccc---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALND---------IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .-....         ......=.+++...+.-+|.+|.++++.+++
T Consensus       238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            111110         1112233567777788899999999998765

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=2.3e-28  Score=274.63  Aligned_cols=259  Identities=22%  Similarity=0.275  Sum_probs=176.7

Q ss_pred             HhhcccccceeeeeeEEEEEEecc-------------CCcceEEEEEEeeccccccchhh--------------hheeee
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTT-------------RTSTTAVAVKKLDRVFQDGEKEF--------------KNEVVV  572 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~-------------~~~~~~vavK~l~~~~~~~~~~~--------------~~E~~~  572 (813)
                      .+.+.++||+|+||+||+|.+...             ...++.||||++........++|              ..|+.+
T Consensus       146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~  225 (507)
T PLN03224        146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM  225 (507)
T ss_pred             CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence            456678999999999999975321             12456799999865332222223              335556


Q ss_pred             eeccccCCc-----ceEEeEeec--------CCceEEEEeecCCCchhhhhhcc------------------------CC
Q 045343          573 IGQTHHKNL-----VRLLGFCDE--------GQNRLLVYEFLNNGTLASFLFGN------------------------LK  615 (813)
Q Consensus       573 l~~l~h~ni-----v~l~g~~~~--------~~~~~lV~e~~~~gsL~~~l~~~------------------------~~  615 (813)
                      +.+++|.++     ++++++|..        ....+|||||+++++|.++++..                        ..
T Consensus       226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~  305 (507)
T PLN03224        226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK  305 (507)
T ss_pred             HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence            666766554     677887743        34689999999999999988642                        12


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCccc
Q 045343          616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW  695 (813)
Q Consensus       616 l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~  695 (813)
                      ++|..++.++.|++++|.|||+   .+|+||||||+|||++.++.+||+|||+++.+....... .....+++.|+|||.
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~g~~tp~Y~aPE~  381 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-PLYGMLDPRYSPPEE  381 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-ccccCCCcceeChhh
Confidence            3577888999999999999995   489999999999999999999999999997654332111 112235789999998


Q ss_pred             ccCCCC----------------------CCccchhhHHHHHHHHHhCCc-CCCcccch--h----hhhhHHHHHHhhccC
Q 045343          696 FRNSTI----------------------TAKVDVYSFGVLLLEIISCRK-SFDIEMGE--E----YAILTDWAFDCYRNE  746 (813)
Q Consensus       696 l~~~~~----------------------~~k~DVwS~Gvvl~elltG~~-p~~~~~~~--~----~~~l~~~~~~~~~~~  746 (813)
                      +.....                      ..+.||||+||+++||++|.. |+......  +    ...+..|  ......
T Consensus       382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~--r~~~~~  459 (507)
T PLN03224        382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW--RMYKGQ  459 (507)
T ss_pred             hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH--Hhhccc
Confidence            854321                      134799999999999999875 55422110  0    0011111  111111


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHH
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDP---SLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPt~~evl~~  792 (813)
                              ...........+...+++.++|..+|   .+|+|++|+++|
T Consensus       460 --------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        460 --------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             --------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence                    11111112235678899999998765   689999999876

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=273.23  Aligned_cols=249  Identities=26%  Similarity=0.365  Sum_probs=202.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEee-----cCCc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCD-----EGQN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-----~~~~  593 (813)
                      +.+|.+.||.|.+|.||++...   ..++..|||++.-. ....+++..|.++++.+ .|||++.++|++.     .++.
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~---~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHV---KTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeee---ecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            3567899999999999999875   35667788877543 44566788899999988 6999999999984     3567


Q ss_pred             eEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +|||||||.+||..|+++..  .++.|..+..|+..++.|+.|||.   ..++|||||-.|||++.++.+||.|||++..
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ  172 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  172 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeee
Confidence            99999999999999998764  577899999999999999999995   4999999999999999999999999999988


Q ss_pred             cccCcccceeecccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      +......  .....||+.|||||++...     .++.++|+||||++..||.-|.+|+....+..               
T Consensus       173 ldsT~gr--RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---------------  235 (953)
T KOG0587|consen  173 LDSTVGR--RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---------------  235 (953)
T ss_pred             eeccccc--ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---------------
Confidence            7754433  3456799999999999543     46778999999999999999999986432211               


Q ss_pred             ccccc-ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDL-VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~-~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+..+ -.|...........+.+.++|..||.+|-++||++.+++++
T Consensus       236 aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  236 ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            11111 12222333355788999999999999999999999998864

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.4e-30  Score=267.14  Aligned_cols=245  Identities=21%  Similarity=0.247  Sum_probs=199.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeec---cccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      ..||-|+||.|=++....   +....|+|.+++   ......+.+..|-++|...+.+.||+|+-.|.+....|+.||-|
T Consensus       426 aTLGvGgFGRVELV~~~~---~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaC  502 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNS---QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEAC  502 (732)
T ss_pred             hhcccCccceEEEEEecc---cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhh
Confidence            469999999999887743   222456665543   33444566888999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccccee
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR  681 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  681 (813)
                      -||.|...|..+..++..+..-++..+.+|++|||   +.+||+|||||+|.+||.+|-+||.|||+|+.+..+..   .
T Consensus       503 lGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K---T  576 (732)
T KOG0614|consen  503 LGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK---T  576 (732)
T ss_pred             cCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCc---e
Confidence            99999999999999999999999999999999999   56999999999999999999999999999999876543   4


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      -.++||+.|.|||++.++..+..+|.||||+++|||++|++||....+-..-.+.       .. -++.+       ..+
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I-------Lk-Gid~i-------~~P  641 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI-------LK-GIDKI-------EFP  641 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH-------Hh-hhhhh-------hcc
Confidence            5689999999999999999999999999999999999999999876542211110       00 01111       011


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHH
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQML  793 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~L  793 (813)
                      ....+...+++++....+|.+|.-     +.+|.++-
T Consensus       642 r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~  678 (732)
T KOG0614|consen  642 RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR  678 (732)
T ss_pred             cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence            233566778888888999999986     67777663

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=4.3e-28  Score=279.57  Aligned_cols=262  Identities=21%  Similarity=0.193  Sum_probs=165.0

Q ss_pred             HhhcccccceeeeeeEEEEEEecc-CCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeE------eecCC
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTT-RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF------CDEGQ  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~-~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~------~~~~~  592 (813)
                      .+.+.++||+|+||.||+|.+..+ ...+..||||++.....  .+....|  .+.+..+.+++.++..      +.++.
T Consensus       133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~  208 (566)
T PLN03225        133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKED  208 (566)
T ss_pred             CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence            456778999999999999998532 11267899998764211  1111111  1111122222222211      34566


Q ss_pred             ceEEEEeecCCCchhhhhhccCC--------------------CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLK--------------------PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~--------------------l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      ..++|+||+.+++|.+++.....                    .....+..++.||+.||+|||+   .+|+||||||+|
T Consensus       209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~N  285 (566)
T PLN03225        209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQN  285 (566)
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHH
Confidence            89999999999999998864321                    1123456789999999999995   499999999999


Q ss_pred             EEEcC-CCCEEEeeccCccccccCcccceeecccccccccCcccccCC----------------------CCCCccchhh
Q 045343          653 ILLDD-YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS----------------------TITAKVDVYS  709 (813)
Q Consensus       653 Ill~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----------------------~~~~k~DVwS  709 (813)
                      ||++. ++.+||+|||+++.+....... .....++++|+|||.+...                      .+..++||||
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~-~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLRVGINYI-PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccccccccccC-CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence            99985 6799999999998665432221 3446789999999965322                      2345679999


Q ss_pred             HHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc----ccccc--cHHHHHHHHHHHHHhcccCCCCC
Q 045343          710 FGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD----MEALN--DIKCVEKLVMVSIWCIQEDPSLR  783 (813)
Q Consensus       710 ~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~l~~l~~~Cl~~dP~~R  783 (813)
                      |||+||||+++..+.+.........+...   ............+.    +....  .........+|+.+||+.||.+|
T Consensus       365 lGviL~el~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR  441 (566)
T PLN03225        365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRN---DYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR  441 (566)
T ss_pred             HHHHHHHHHhCcCCCchHHHHHHHHHHhc---CCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence            99999999997766542211100000000   00000000001110    00000  00112345689999999999999


Q ss_pred             CCHHHHHHH
Q 045343          784 PTMKKVLQM  792 (813)
Q Consensus       784 Pt~~evl~~  792 (813)
                      ||+.|++++
T Consensus       442 ~ta~e~L~H  450 (566)
T PLN03225        442 ISAKAALAH  450 (566)
T ss_pred             CCHHHHhCC
Confidence            999999986

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=7e-29  Score=275.51  Aligned_cols=240  Identities=31%  Similarity=0.398  Sum_probs=184.7

Q ss_pred             cccceeeee-eEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFG-IVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG-~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      +.+|.|..| .||+|..     +++.||||++-..   ...-.++|+..|+.- +|+|||+.++.-.+....|+..|.| 
T Consensus       515 eilG~Gs~Gt~Vf~G~y-----e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY-----EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             HHcccCCCCcEEEEEee-----CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            468999887 5799998     7889999998432   233467899888877 6999999999989999999999998 


Q ss_pred             CCchhhhhhcc--CC--CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-----CCCEEEeeccCccccc
Q 045343          603 NGTLASFLFGN--LK--PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-----YYNARISDFGLAKLLT  673 (813)
Q Consensus       603 ~gsL~~~l~~~--~~--l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~DfGla~~~~  673 (813)
                      ..+|.+++...  ..  ..-...+.+..|+++||+|||   +.+||||||||.||||+.     ...++|+|||+++.+.
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            55999999764  11  111344678899999999999   679999999999999975     2579999999999988


Q ss_pred             cCcccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhC-CcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISC-RKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .+.+.. ......||.||+|||++....-+.++||+|+||++|+.++| .+||...-..+...+       .....+..+
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl-------~~~~~L~~L  735 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL-------TGNYTLVHL  735 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh-------cCccceeee
Confidence            765432 13456799999999999998888899999999999999995 899974432211111       011111111


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .       ...++  +..+||.+|++++|..||++.+|+.+
T Consensus       736 ~-------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  736 E-------PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             c-------cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            1       11122  77899999999999999999999753

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.6e-29  Score=242.90  Aligned_cols=259  Identities=25%  Similarity=0.360  Sum_probs=196.4

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCC-----ceEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----NRLL  596 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~~l  596 (813)
                      .+.||.|+||.||.+.++   .+++.||.|++.....  ...+.+.+|+++|..++|.|++..++...-..     ++++
T Consensus        58 DRPIGYGAFGVVWsVTDP---RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDP---RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCcccccceeEEEeccCC---CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            478999999999998875   4788999999876432  23467889999999999999999888764332     5678


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ++|.|.. +|..++-....++-..+.-+..||++||.|||   +.+|.||||||.|.|++.+..+||+|||+++....++
T Consensus       135 ~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            8888754 78888877788888888889999999999999   5699999999999999999999999999999877666


Q ss_pred             ccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc----------
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN----------  745 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~----------  745 (813)
                      ... ++..+-|..|.|||++.+. .|+...||||.||++.||+..+..|....+-+...+.   .+++..          
T Consensus       211 ~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lI---tdLLGTPs~EaMr~AC  286 (449)
T KOG0664|consen  211 RLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMI---IDLLGTPSQEAMKYAC  286 (449)
T ss_pred             hhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHH---HHHhCCCcHHHHHHHh
Confidence            554 4555678999999999876 5899999999999999999999988776554333221   111111          


Q ss_pred             -Cccccccc-----cccc---cccc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          746 -EKLDDLVE-----GDME---ALND-IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       746 -~~~~~~~~-----~~~~---~~~~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                       +....++.     +...   ...+ .....+..++...++..||++|.+..+.+.++
T Consensus       287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence             11011111     1110   0001 11223445677778999999999999998876

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-27  Score=239.06  Aligned_cols=246  Identities=24%  Similarity=0.302  Sum_probs=192.4

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeecc-ccCCcceEEeEeecCCceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.||+|+|..|-.+.+.   ...+.+|+|++++..-.   +..=.+.|-.+..+- +||.+|.|..++..+..+++|
T Consensus       253 ~ll~vigrgsyakvl~~~~~---~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  253 DLLRVIGRGSYAKVLLVRLK---KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             eeeeeecCcchhhhhheehc---ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            45688999999999998875   35678999988764222   222345666666655 699999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      .||+++|+|--+++.+.+++++..+-+...|+-||.|||+   .+|++||||..|||||..|++||+|+|+.+.--....
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd  406 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD  406 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence            9999999999999999999999999999999999999995   4999999999999999999999999999886433222


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch-hhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                        ....++||+.|.|||++.+..|...+|.|++||+|+||+.|+.||+....+ ......+...+.+.+        ..+
T Consensus       407 --~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile--------kqi  476 (593)
T KOG0695|consen  407 --TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE--------KQI  476 (593)
T ss_pred             --ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh--------hcc
Confidence              256789999999999999999999999999999999999999999854321 111222222232222        222


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPT  785 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  785 (813)
                      +.+.+  .+.+...++..-|++||.+|.-
T Consensus       477 riprs--lsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  477 RIPRS--LSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             cccce--eehhhHHHHHHhhcCCcHHhcC
Confidence            22112  2345567778889999999853

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.94  E-value=3e-28  Score=218.97  Aligned_cols=103  Identities=38%  Similarity=0.580  Sum_probs=74.0

Q ss_pred             CCeeEEEecCCCCCCCCC--CceEEEEeeCccEEEeCCCCCEEeee-ccCCCc--eeEEEEecCcCEEEEecCCcccccc
Q 045343           80 AKTVVWYTDNKDQNPAVP--RGSQVKLTADHGLVLNDPQGKQVWSS-EIDIGT--VAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus        80 ~~tvvWvanr~~~~~~~~--~~~~l~~~~~g~l~l~~~~~~~~wst-~~~~~~--~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      ++||||+|||+.  +..+  ...+|.|+.||||+|++..|++||+| ++.+.+  ...|+|+|+|||||++..+++||||
T Consensus         1 ~~tvvW~an~~~--p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~S   78 (114)
T PF01453_consen    1 PRTVVWVANRNS--PLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQS   78 (114)
T ss_dssp             ---------TTE--EEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEES
T ss_pred             Cccccccccccc--ccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEee
Confidence            379999999993  3223  45899999999999999999999999 555544  6899999999999999999999999


Q ss_pred             cccCcCcccCCCcccc----c--cceeecCCCCCCC
Q 045343          155 FSNPSDTLLPGQTMET----K--QGLFSRKSETNFS  184 (813)
Q Consensus       155 FD~PTDTlLpg~~l~~----~--~~L~S~~s~~dps  184 (813)
                      |||||||+||||+|+.    .  ..++||++.+|||
T Consensus        79 f~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   79 FDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             TTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             cCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999999876    2  3599999999997

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=4.5e-27  Score=220.94  Aligned_cols=194  Identities=27%  Similarity=0.414  Sum_probs=161.1

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      .++||+|++|.|=+-.+.   ..+...|||++... ..+..++..+|+.+..+- .+|.+|+++|........++.||.|
T Consensus        51 i~elGrGayG~vekmrh~---~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M  127 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHI---QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM  127 (282)
T ss_pred             hhhhcCCccchhhheeec---cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence            468999999998776663   57889999999753 334456778888876664 7999999999998889999999998


Q ss_pred             CCCchhhhh----hccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          602 NNGTLASFL----FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       602 ~~gsL~~~l----~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +- ||+.+-    ......++...-+|+..+.+||.|||+  ...++|||+||+||||+.+|++|++|||++-.+..+-.
T Consensus       128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA  204 (282)
T KOG0984|consen  128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA  204 (282)
T ss_pred             hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence            54 676653    455778899999999999999999997  47899999999999999999999999999987764432


Q ss_pred             cceeecccccccccCcccccC----CCCCCccchhhHHHHHHHHHhCCcCCCc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN----STITAKVDVYSFGVLLLEIISCRKSFDI  726 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~----~~~~~k~DVwS~Gvvl~elltG~~p~~~  726 (813)
                         .+...|-..|||||.+..    ..|+-|+||||||+.+.||.+++.|++.
T Consensus       205 ---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  205 ---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             ---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence               222446778999998853    3688999999999999999999999874

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=7.7e-27  Score=248.70  Aligned_cols=194  Identities=22%  Similarity=0.328  Sum_probs=167.4

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--------cccchhhhheeeeeeccc---cCCcceEEeEeec
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--------QDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDE  590 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~  590 (813)
                      ...+++|.|+||.|+.++.+   .+...|+||.+.+..        ....-....||+||..++   |+||++++++|++
T Consensus       564 ttlq~lG~GAyGkV~lai~K---~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  564 TTLQPLGEGAYGKVNLAIHK---ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             eeeeeccccccceEEEeeec---ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            34568999999999999985   357789999886531        122234678999999997   9999999999999


Q ss_pred             CCceEEEEeec-CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          591 GQNRLLVYEFL-NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       591 ~~~~~lV~e~~-~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      ++..+|++|-. ++.+|.+++.-+..+++.+..-|+.||+.|++|||.+   +|||||||-+||.++.+|-+||+|||.|
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccch
Confidence            99999999975 4569999999999999999999999999999999954   9999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCC
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFD  725 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~  725 (813)
                      .+...+.    ...++||.+|.|||++.+.+| ...-|||++|++||.++....||.
T Consensus       718 a~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  718 AYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            8876543    345789999999999999886 556899999999999998877764

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=2.8e-26  Score=245.93  Aligned_cols=199  Identities=24%  Similarity=0.366  Sum_probs=169.2

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.||-|+||+|-++.-.   .....+|.|.|++..   .......++|-.||..-..+=||+|+-.|.+++.+|+||+|+
T Consensus       635 k~iGvGAFGeV~Lv~Kv---DT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYI  711 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVRKV---DTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYI  711 (1034)
T ss_pred             eeecccccceeEEEeec---chhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEecc
Confidence            46999999999987543   246788999987632   222345788999999999999999999999999999999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc-------
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-------  674 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~-------  674 (813)
                      +||++-.+|.....+.+...+-++..+..|+++.|   ..|+|||||||.|||||.+|++||+||||..-++.       
T Consensus       712 PGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  712 PGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             CCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            99999999999999999999999999999999999   66999999999999999999999999999653321       


Q ss_pred             --Ccc-------------------------------cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC
Q 045343          675 --NQS-------------------------------KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR  721 (813)
Q Consensus       675 --~~~-------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~  721 (813)
                        +..                               .......+||+.|+|||++....++.-+|.||.|||||||+.|+
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~  868 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ  868 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence              000                               00012357999999999999999999999999999999999999


Q ss_pred             cCCCcccc
Q 045343          722 KSFDIEMG  729 (813)
Q Consensus       722 ~p~~~~~~  729 (813)
                      .||-....
T Consensus       869 ~pf~~~tp  876 (1034)
T KOG0608|consen  869 PPFLADTP  876 (1034)
T ss_pred             CCccCCCC
Confidence            99976654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=2.2e-25  Score=224.96  Aligned_cols=211  Identities=36%  Similarity=0.557  Sum_probs=182.1

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCc
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGT  605 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gs  605 (813)
                      ||+|.+|.||++....   .+..++||++...... ..+.+.+|+..++.++|++++++++++......++++|++++++
T Consensus         1 l~~g~~~~v~~~~~~~---~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~   77 (215)
T cd00180           1 LGEGGFGTVYLARDKK---TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS   77 (215)
T ss_pred             CCcCCceEEEEEEecC---CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence            6899999999998842   4678999998754322 24678999999999999999999999999999999999999999


Q ss_pred             hhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccccccCcccceeec
Q 045343          606 LASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLNQSKAIRTA  683 (813)
Q Consensus       606 L~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~  683 (813)
                      |.+++... ..+++..+..++.++++++.+||+.   +++|+||+|.||+++. ++.++|+|||.+........  ....
T Consensus        78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~  152 (215)
T cd00180          78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT  152 (215)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence            99998765 5788999999999999999999954   9999999999999999 89999999999987654321  1223


Q ss_pred             ccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccH
Q 045343          684 IRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI  762 (813)
Q Consensus       684 ~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  762 (813)
                      ..+...|++||.+... ..+.+.|+|++|+++++|                                             
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------  187 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------  187 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence            4577889999999877 788999999999999998                                             


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       763 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                         ..+.+++..|++.+|.+||++.++++.+
T Consensus       188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence               5677899999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.93  E-value=1.5e-25  Score=203.50  Aligned_cols=114  Identities=31%  Similarity=0.474  Sum_probs=99.7

Q ss_pred             ceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEe
Q 045343           34 ATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLN  113 (813)
Q Consensus        34 ~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~  113 (813)
                      +.|..++   +|+|++|.|++|||.+..   .. ..+.+|||.+++ +++||.||++.   |....+.|.|+.||+|+|+
T Consensus         2 ~~l~~~~---~l~s~~~~f~~G~~~~~~---q~-~dgnlv~~~~~~-~~~vW~snt~~---~~~~~~~l~l~~dGnLvl~   70 (116)
T cd00028           2 NPLSSGQ---TLVSSGSLFELGFFKLIM---QS-RDYNLILYKGSS-RTVVWVANRDN---PSGSSCTLTLQSDGNLVIY   70 (116)
T ss_pred             cCcCCCC---EEEeCCCcEEEecccCCC---CC-CeEEEEEEeCCC-CeEEEECCCCC---CCCCCEEEEEecCCCeEEE
Confidence            3566776   999999999999999852   21 489999999887 89999999983   3566789999999999999


Q ss_pred             CCCCCEEeeeccCC-CceeEEEEecCcCEEEEecCCcccccccccC
Q 045343          114 DPQGKQVWSSEIDI-GTVAVGHMNDTGNFVLASSSSSKLWDSFSNP  158 (813)
Q Consensus       114 ~~~~~~~wst~~~~-~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~P  158 (813)
                      |.+|.+||+|++.+ .+..+|+|+|+|||||++.++++||||||||
T Consensus        71 ~~~g~~vW~S~~~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P  116 (116)
T cd00028          71 DGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP  116 (116)
T ss_pred             cCCCcEEEEecccCCCCceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence            99999999999886 5567899999999999999999999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.93  E-value=4.2e-26  Score=228.25  Aligned_cols=268  Identities=26%  Similarity=0.316  Sum_probs=192.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEee------cCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD------EGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~------~~~~~~l  596 (813)
                      +.+|.|.- .|--+.+   .-.++.||+|++...  .....++..+|..++..++|+||++++.++.      +-.+.++
T Consensus        23 ~p~~~g~~-~v~~a~D---~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~   98 (369)
T KOG0665|consen   23 KPIGSGAQ-IVVAAFD---QVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYL   98 (369)
T ss_pred             cccCCCCc-eEEecch---hhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHH
Confidence            35666666 3333332   235678999998653  2334567889999999999999999999983      2346799


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+|. .+|...+.  ..++-+....|..|++.|+.|||   +.+|+||||||+||++..+..+||.|||+|+....+ 
T Consensus        99 v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-  171 (369)
T KOG0665|consen   99 VMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-  171 (369)
T ss_pred             HHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc-
Confidence            999995 47777776  56778889999999999999999   569999999999999999999999999999876554 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hh---------------hhHHHHH
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YA---------------ILTDWAF  740 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~---------------~l~~~~~  740 (813)
                        ...+.++.|..|.|||++.+..+.+.+||||.||++.||++|+..|.+..--+ ..               .+...+.
T Consensus       172 --~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  172 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             --cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence              23677889999999999999889999999999999999999998886432110 00               0111111


Q ss_pred             Hhhcc------Ccccccc-cccc--cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hh---cCcCCCCCCCC
Q 045343          741 DCYRN------EKLDDLV-EGDM--EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LE---GVVEVSLPPNP  805 (813)
Q Consensus       741 ~~~~~------~~~~~~~-~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~---~~~~~~~p~~p  805 (813)
                      .....      -...+++ |...  ....+......+.+++.+||..||++|.++++++++  ++   .-.++++|+.|
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~ev~ap~pe  328 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDEVEAPPPE  328 (369)
T ss_pred             HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecccccccCCCCc
Confidence            11110      0001111 1100  011111234567889999999999999999999986  33   33345555554

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.92  E-value=1.1e-25  Score=214.60  Aligned_cols=258  Identities=20%  Similarity=0.348  Sum_probs=189.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCC--ceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQ--NRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--~~~  595 (813)
                      ..|++.+++|+|-+++||.|....   +...++||.++..   ..+.+.+|+.+|..+. |+||++|++...+..  ...
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~---~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa  111 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINIT---NNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS  111 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccC---CCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence            346788999999999999997542   5567899998754   4567899999999997 999999999987655  568


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~  674 (813)
                      ||+||+.+.+...+.   ..++...+...+.++++||.|+|   +.||+|||+||.|++||. .-.++|+|+|+|.+..+
T Consensus       112 LiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             hHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            999999997765543   34566678889999999999999   679999999999999995 56799999999999887


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHhh--
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDCY--  743 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~--  743 (813)
                      .....   ..+.+..|.-||.+-. +.++..-|+|||||+|.+|+..+.||-...+.... +...+        ...+  
T Consensus       186 ~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ-LVkIakVLGt~el~~Yl~K  261 (338)
T KOG0668|consen  186 GKEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVKIAKVLGTDELYAYLNK  261 (338)
T ss_pred             Cceee---eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH-HHHHHHHhChHHHHHHHHH
Confidence            65433   2345667888998854 45788999999999999999999998543321111 11100        0000  


Q ss_pred             ----ccCcccccccccc--------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 ----RNEKLDDLVEGDM--------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ----~~~~~~~~~~~~~--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .......++....        ......-...+.++++...|..|-.+|||++|.+.+
T Consensus       262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence                0111111111110        011111224678899999999999999999998754

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=241.83  Aligned_cols=250  Identities=25%  Similarity=0.308  Sum_probs=202.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |++...+|.|.+|.|||+...   ..+...|||.++.......+-.+.|+-+++..+|+|||.++|.+...+..++.|||
T Consensus        17 yellqrvgsgTygdvyKaRd~---~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   17 YELLQRVGSGTYGDVYKARDK---RSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             hhheeeecCCcccchhhhccc---ccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            556788999999999999875   46778999999887777778889999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +.+|+|.+.-+-...+++.++....+...+|++|||   +.+=+|||||-.|||+++.+.+|++|||.+-.+...-.+  
T Consensus        94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K--  168 (829)
T KOG0576|consen   94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK--  168 (829)
T ss_pred             cCCCcccceeeecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhhhhh--
Confidence            999999999999999999999999999999999999   558899999999999999999999999998766543222  


Q ss_pred             eecccccccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc-cc
Q 045343          681 RTAIRGTKGYVAPEWF---RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG-DM  756 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l---~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~  756 (813)
                      ...+.||+.|||||+.   ....+..++|||++|+...|+-.-.+|.....+.....+       .    .....++ .+
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L-------m----TkS~~qpp~l  237 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL-------M----TKSGFQPPTL  237 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH-------h----hccCCCCCcc
Confidence            3456799999999987   345689999999999999999776666432221111100       0    0111111 11


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      +  ......+.+.++++.|+-.+|.+||+++.+++
T Consensus       238 k--Dk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  238 K--DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             c--CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            1  12356788999999999999999999987664

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.91  E-value=2.4e-24  Score=220.58  Aligned_cols=198  Identities=30%  Similarity=0.459  Sum_probs=171.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      .+.+.||.|++|.||++....   .+..+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++|+
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKG---TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcC---CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            456889999999999998852   4678999998765443 466788999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCC-CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~-l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++++|.+++..... +++.....++.+++.++.+||+.   +++|+||+|+||+++.++.++|+|||.+......... 
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-  154 (225)
T smart00221       79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-  154 (225)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence            999999999987666 89999999999999999999954   9999999999999999999999999999887644211 


Q ss_pred             eeecccccccccCcccc-cCCCCCCccchhhHHHHHHHHHhCCcCCCc
Q 045343          680 IRTAIRGTKGYVAPEWF-RNSTITAKVDVYSFGVLLLEIISCRKSFDI  726 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l-~~~~~~~k~DVwS~Gvvl~elltG~~p~~~  726 (813)
                      ......++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            12334578889999998 666778899999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.6e-24  Score=227.44  Aligned_cols=137  Identities=26%  Similarity=0.374  Sum_probs=111.6

Q ss_pred             HHHHHH-HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-----c---CCcce
Q 045343          513 YKELEE-ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-----H---KNLVR  583 (813)
Q Consensus       513 ~~el~~-~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~  583 (813)
                      .-|... +.|.+.++||=|.|++||++.+.   ...+.||+|+.+.. +.-.+....||++|++++     |   ..||+
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDt---q~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDT---QNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeec---cCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            344445 78888999999999999999875   35678999998764 333456788999999883     3   35999


Q ss_pred             EEeEee----cCCceEEEEeecCCCchhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          584 LLGFCD----EGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       584 l~g~~~----~~~~~~lV~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      |+++|.    .+.+.+||+|++ |.+|..+|..  ...++...+.+|++||+.||.|||.+  .+|||-||||+|||+.
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLC  222 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeee
Confidence            999995    466899999998 5566666653  36789999999999999999999986  5999999999999993

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.91  E-value=1.4e-25  Score=236.10  Aligned_cols=268  Identities=22%  Similarity=0.241  Sum_probs=205.2

Q ss_pred             CCCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc------cCCcce
Q 045343          510 CFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH------HKNLVR  583 (813)
Q Consensus       510 ~~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~  583 (813)
                      .+.+-|+....|++.--.|+|-|++|-+|...   ..+..||||++... +.-.+.=+.|+++|++|+      .-|.++
T Consensus       423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~---~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclr  498 (752)
T KOG0670|consen  423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQ---ARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLR  498 (752)
T ss_pred             EEehhhhhcceeEEEeccccceeeeeeecccc---CCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence            35677899999999999999999999999874   34569999999753 223344567999999995      357999


Q ss_pred             EEeEeecCCceEEEEeecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-C
Q 045343          584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-Y  659 (813)
Q Consensus       584 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~  659 (813)
                      |+-.|.+.++++||+|-+ ..+|.+.|..-   ..+..+.+..+++|+.-||.+|.   ..+|+|.||||.|||+.+. .
T Consensus       499 l~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~  574 (752)
T KOG0670|consen  499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKN  574 (752)
T ss_pred             HHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcc
Confidence            999999999999999976 56889998653   46788899999999999999999   5699999999999999865 5


Q ss_pred             CEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH
Q 045343          660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       660 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~  739 (813)
                      .+||||||.|.....++    .+.+.-+..|.|||++.+.+|+...|+||.||.||||.||+..|.+........   ..
T Consensus       575 iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr---l~  647 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR---LF  647 (752)
T ss_pred             eeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHH---HH
Confidence            68999999998766543    345556778999999999999999999999999999999999997653322111   11


Q ss_pred             HHh--------hccCc----------------ccc-----------cccc------ccc-----ccccHHHHHHHHHHHH
Q 045343          740 FDC--------YRNEK----------------LDD-----------LVEG------DME-----ALNDIKCVEKLVMVSI  773 (813)
Q Consensus       740 ~~~--------~~~~~----------------~~~-----------~~~~------~~~-----~~~~~~~~~~l~~l~~  773 (813)
                      .++        +..+.                ...           .+.|      .+.     ..........+.+|+.
T Consensus       648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd  727 (752)
T KOG0670|consen  648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD  727 (752)
T ss_pred             HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence            110        00000                000           0111      000     1112355678899999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 045343          774 WCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       774 ~Cl~~dP~~RPt~~evl~~  792 (813)
                      .||..||++|.|..+++++
T Consensus       728 kml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  728 KMLILDPEKRITVNQALKH  746 (752)
T ss_pred             HHhccChhhcCCHHHHhcC
Confidence            9999999999999998875

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.91  E-value=3.5e-24  Score=194.05  Aligned_cols=112  Identities=32%  Similarity=0.479  Sum_probs=97.0

Q ss_pred             ceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEe
Q 045343           34 ATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLN  113 (813)
Q Consensus        34 ~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~  113 (813)
                      +.|..++   +|+|++|.|++|||.+..   .  .++.+|||++.+ +++||+||++   .|+..++.|.|+.||+|+|+
T Consensus         2 ~~l~~~~---~l~s~~~~f~~G~~~~~~---q--~dgnlV~~~~~~-~~~vW~snt~---~~~~~~~~l~l~~dGnLvl~   69 (114)
T smart00108        2 NTLSSGQ---TLVSGNSLFELGFFTLIM---Q--NDYNLILYKSSS-RTVVWVANRD---NPVSDSCTLTLQSDGNLVLY   69 (114)
T ss_pred             cccCCCC---EEecCCCcEeeeccccCC---C--CCEEEEEEECCC-CcEEEECCCC---CCCCCCEEEEEeCCCCEEEE
Confidence            3566666   899999999999998752   2  479999999887 8999999998   33444588999999999999


Q ss_pred             CCCCCEEeeeccC-CCceeEEEEecCcCEEEEecCCccccccccc
Q 045343          114 DPQGKQVWSSEID-IGTVAVGHMNDTGNFVLASSSSSKLWDSFSN  157 (813)
Q Consensus       114 ~~~~~~~wst~~~-~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~  157 (813)
                      +.+|.+||+|++. +.+..+++|+|+|||||++..+++|||||||
T Consensus        70 ~~~g~~vW~S~t~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~  114 (114)
T smart00108       70 DGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY  114 (114)
T ss_pred             eCCCCEEEEecccCCCCceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence            9999999999987 4556789999999999999999999999997

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.90  E-value=1.9e-24  Score=224.69  Aligned_cols=264  Identities=24%  Similarity=0.313  Sum_probs=192.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +...++||+|.|++||++.+.........||+|.+...  .....+.+|+++|..+. +.||+++.+++..++...+|+|
T Consensus        38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp  115 (418)
T KOG1167|consen   38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP  115 (418)
T ss_pred             hhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence            34567899999999999998754346788999998653  34567899999999994 9999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCccccccCc--
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQ--  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~~~--  676 (813)
                      |+++....++..+   ++...+..++..+.+||.++|.   .|||||||||+|+|.+ ..+.-.|.|||+|......+  
T Consensus       116 ~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~  189 (418)
T KOG1167|consen  116 YFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT  189 (418)
T ss_pred             ccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHhhhhh
Confidence            9999998888754   4578888999999999999995   5999999999999997 45778999999987221000  


Q ss_pred             ----------------------------------------ccceeecccccccccCcccccC-CCCCCccchhhHHHHHH
Q 045343          677 ----------------------------------------SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLL  715 (813)
Q Consensus       677 ----------------------------------------~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~  715 (813)
                                                              .........||+||.|||++.. ...++++||||-|||++
T Consensus       190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L  269 (418)
T KOG1167|consen  190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL  269 (418)
T ss_pred             hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence                                                    0000112359999999999865 45789999999999999


Q ss_pred             HHHhCCcCCCcccchhhhhhH------HHHHH--hhccCc--cc----------------cc-ccccc-------ccccc
Q 045343          716 EIISCRKSFDIEMGEEYAILT------DWAFD--CYRNEK--LD----------------DL-VEGDM-------EALND  761 (813)
Q Consensus       716 elltG~~p~~~~~~~~~~~l~------~~~~~--~~~~~~--~~----------------~~-~~~~~-------~~~~~  761 (813)
                      .+++++.||-....+......      ....+  ....+.  +.                .+ +..-.       .....
T Consensus       270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~  349 (418)
T KOG1167|consen  270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG  349 (418)
T ss_pred             hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence            999999999644332111100      00000  000000  00                00 00000       00011


Q ss_pred             HH-HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          762 IK-CVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       762 ~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+ .+..+++++.+|+..||.+|.|++|.+++
T Consensus       350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  350 SDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             cccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence            12 23478899999999999999999999875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=3.3e-24  Score=259.88  Aligned_cols=197  Identities=18%  Similarity=0.226  Sum_probs=140.7

Q ss_pred             ecccc-CCcceEEeEe-------ecCCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 045343          574 GQTHH-KNLVRLLGFC-------DEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQII  644 (813)
Q Consensus       574 ~~l~h-~niv~l~g~~-------~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iv  644 (813)
                      +.++| .||++++++|       .+.+..++++|++ +++|.++|.. ...+++..++.++.||++||.|||+   .+|+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~gIv  102 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS---QGIV  102 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh---CCee
Confidence            45667 6888999987       3334567888887 5699999965 3568999999999999999999995   5999


Q ss_pred             eCCCCCCcEEEcC-------------------CCCEEEeeccCccccccCcc--------------cceeeccccccccc
Q 045343          645 HCDIKPQNILLDD-------------------YYNARISDFGLAKLLTLNQS--------------KAIRTAIRGTKGYV  691 (813)
Q Consensus       645 H~dlk~~NIll~~-------------------~~~~kl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y~  691 (813)
                      ||||||+||||+.                   ++.+||+|||+++.......              ........||+.|+
T Consensus       103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  182 (793)
T PLN00181        103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT  182 (793)
T ss_pred             eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence            9999999999954                   44566666776654211000              00011235788999


Q ss_pred             CcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHH
Q 045343          692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMV  771 (813)
Q Consensus       692 aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  771 (813)
                      |||++.+..++.++|||||||+||||++|..|+.....    .+......         ...+..     ........++
T Consensus       183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~~---------~~~~~~-----~~~~~~~~~~  244 (793)
T PLN00181        183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRHR---------VLPPQI-----LLNWPKEASF  244 (793)
T ss_pred             ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHHh---------hcChhh-----hhcCHHHHHH
Confidence            99999999999999999999999999998887642211    11010000         011100     1112345678


Q ss_pred             HHHhcccCCCCCCCHHHHHHH
Q 045343          772 SIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       772 ~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.+||+++|.+||+|.||+++
T Consensus       245 ~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        245 CLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHhCCCChhhCcChHHHhhc
Confidence            889999999999999999875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-23  Score=204.84  Aligned_cols=253  Identities=19%  Similarity=0.287  Sum_probs=184.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeE-eecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGF-CDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~-~~~~~~~~l  596 (813)
                      ..|++.+.||+|.||.+-++.+.   +....+++|-+... ....++|.+|..---.| .|.||+.-++. |+..+-.+.
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr---~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF   99 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHR---QSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF   99 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeecc---CCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence            34677889999999999988774   56678999988764 34467899988765556 58999987764 566677889


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--CCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--~~~~~kl~DfGla~~~~~  674 (813)
                      ++||++-|+|..-+... .+.+....+++.|++.||.|+|   +.++||||||.+||||-  +...+||+|||+.+..+.
T Consensus       100 ~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             eeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence            99999999999887653 4567778889999999999999   56999999999999993  345799999999886543


Q ss_pred             CcccceeecccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      .-     ....-+..|.+||.....     ...+.+|||.||++++.++||+.|++.....+..   .|.+..+..+...
T Consensus       176 tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~---Y~~~~~w~~rk~~  247 (378)
T KOG1345|consen  176 TV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP---YWEWEQWLKRKNP  247 (378)
T ss_pred             ee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch---HHHHHHHhcccCc
Confidence            21     122345678999977543     3567899999999999999999999844332221   2333333333332


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .+.+.     . ....+.+..+.++-+.++|++|--..++.++.
T Consensus       248 ~~P~~-----F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  248 ALPKK-----F-NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             cCchh-----h-cccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence            22111     1 12345667777888999999996555555543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.89  E-value=1.2e-22  Score=200.17  Aligned_cols=166  Identities=23%  Similarity=0.189  Sum_probs=125.5

Q ss_pred             Cchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          604 GTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       604 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      |+|.+++... ..+++..++.++.||++||.|||+.   +      ||+|||++.++.+|+  ||+++......      
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence            6899999864 5689999999999999999999965   3      999999999999999  99998764322      


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccH
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI  762 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  762 (813)
                       ..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+....... ....     ....  ....
T Consensus        64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~-~~~~-----~~~~--~~~~  133 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGM-PADD-----PRDR--SNLE  133 (176)
T ss_pred             -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHh-ccCC-----cccc--ccHH
Confidence             257899999999999999999999999999999999999996443211 1111111110 0000     0000  0111


Q ss_pred             HHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          763 KCVE--KLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       763 ~~~~--~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....  .+.+++.+||+.+|.+||++.|+++++..+
T Consensus       134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            2222  689999999999999999999999998654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.6e-23  Score=204.23  Aligned_cols=256  Identities=19%  Similarity=0.327  Sum_probs=194.3

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEee--ccccccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      .-+.-...++..+|.+...|+.|+|.+     ++..+++|++.  .......++|.+|.-.|+.+.||||+.++|.|...
T Consensus       185 ~gid~~~lnl~tkl~e~hsgelwrgrw-----qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp  259 (448)
T KOG0195|consen  185 TGIDVSSLNLITKLAESHSGELWRGRW-----QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP  259 (448)
T ss_pred             cCcchhhhhhhhhhccCCCcccccccc-----cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC
Confidence            334444556778899999999999998     44456666664  33344457899999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      .+..++..||+-|+|...|+...  ..+..+..+++.+||+|++|||.- .+-|..--|....|+||++.+++|+= +-+
T Consensus       260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~  337 (448)
T KOG0195|consen  260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADT  337 (448)
T ss_pred             CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccc
Confidence            99999999999999999998764  457788999999999999999964 33344557999999999999888751 111


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCC---CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT---AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~---~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      ++...      .....-.+.|++||.++.++.+   ..+|+|||.+++|||.|...||..-..-+....           
T Consensus       338 kfsfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-----------  400 (448)
T KOG0195|consen  338 KFSFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-----------  400 (448)
T ss_pred             eeeee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-----------
Confidence            11110      1222346789999999887654   469999999999999999999975544322110           


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                          +.-..++...+...+..+.+++.-|++.||.+||.++.|+-+||+++
T Consensus       401 ----ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  401 ----IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ----hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                11111222223345678899999999999999999999999999864

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=7.1e-21  Score=205.45  Aligned_cols=166  Identities=22%  Similarity=0.121  Sum_probs=125.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-----cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-----QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ..|.+.+.||+|+||+||+|.....  .+..+|||++....     ....+.+.+|+++|++++|+|+++.+..   ...
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~   92 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGD--PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK   92 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCC--CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence            4477789999999999999987532  45668999875321     1124468999999999999999853322   245


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCC-CCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDI-KPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dl-k~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .+|||||+++++|... ....      ...++.+++++|.|||+   .+|+|||| ||+|||++.++.+||+|||+++.+
T Consensus        93 ~~LVmE~~~G~~L~~~-~~~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~  162 (365)
T PRK09188         93 DGLVRGWTEGVPLHLA-RPHG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF  162 (365)
T ss_pred             cEEEEEccCCCCHHHh-Cccc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence            7999999999999632 1111      24678899999999995   49999999 999999999999999999999977


Q ss_pred             ccCcccce------eecccccccccCcccccCC
Q 045343          673 TLNQSKAI------RTAIRGTKGYVAPEWFRNS  699 (813)
Q Consensus       673 ~~~~~~~~------~~~~~gt~~y~aPE~l~~~  699 (813)
                      ........      .....+++.|+|||.+...
T Consensus       163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             ccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            54321111      1345688889999998543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.82  E-value=1.8e-19  Score=195.23  Aligned_cols=261  Identities=20%  Similarity=0.209  Sum_probs=191.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc----CCcceEEeEe-ecCCce
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH----KNLVRLLGFC-DEGQNR  594 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~-~~~~~~  594 (813)
                      .+.+.++||+|+||.||++......  ...+|+|............+..|..++..+.+    +++..+++.. ..+...
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            5677899999999999999875332  45788887765433333368888888888873    6889999988 477778


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-----CCEEEeecc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-----YNARISDFG  667 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-----~~~kl~DfG  667 (813)
                      ++||+.. +.+|.++....  ..++..+.++|+.|++.+|.+||+   .+++||||||.|+++...     ..+.|.|||
T Consensus        97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            9999875 77999987433  678999999999999999999995   599999999999999754     469999999


Q ss_pred             Ccc--ccccCccc------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch-hhhhhHHH
Q 045343          668 LAK--LLTLNQSK------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILTDW  738 (813)
Q Consensus       668 la~--~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~-~~~~l~~~  738 (813)
                      +++  ........      ......+||.+|.++++..+...+.+.|+||++.++.|++.|..|+...... ....+...
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~  252 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD  252 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence            999  43222211      1023456999999999999999999999999999999999999998644321 11111110


Q ss_pred             HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ..        ......     .....+..+.++...+-..+..++|....+...|++....
T Consensus       253 ~~--------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  253 PR--------KLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             hh--------hhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            00        001110     0111234555566656668999999999999998765543

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.82  E-value=4.2e-20  Score=165.88  Aligned_cols=86  Identities=30%  Similarity=0.662  Sum_probs=68.6

Q ss_pred             EEEecCCceeEeecccccCCcceEEEEEEeeCceeEEEeecCCCCCCeEEEEcccccccccccCCCCCCCCCCCCcccCC
Q 045343          241 YILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLD  320 (813)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~~~~~~~~~W~~~~~~p~d~Cd~y~~~~~~~~CG~~g~C~~~  320 (813)
                      |.|..+...++++...  .+.+.++|++||.+|++|+|.|.+ ..++|.+.|++|.|+||+      |+.||+||+|+. 
T Consensus        25 ~~fv~~~~e~~~t~~~--~~~s~~~r~~ld~~G~l~~~~w~~-~~~~W~~~~~~p~d~Cd~------y~~CG~~g~C~~-   94 (110)
T PF00954_consen   25 YSFVSNNEEVYYTYSL--SNSSVLSRLVLDSDGQLQRYIWNE-STQSWSVFWSAPKDQCDV------YGFCGPNGICNS-   94 (110)
T ss_pred             EEEEECCCeEEEEEec--CCCceEEEEEEeeeeEEEEEEEec-CCCcEEEEEEecccCCCC------ccccCCccEeCC-
Confidence            3344444444444332  256779999999999999999965 478899999999999999      579999999964 


Q ss_pred             CCCCCcccCCCCCcccC
Q 045343          321 SDRRPKCACPKGYSLLD  337 (813)
Q Consensus       321 ~~~~~~C~Cl~GF~~~~  337 (813)
                       +..|.|+||+||+|++
T Consensus        95 -~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   95 -NNSPKCSCLPGFEPKN  110 (110)
T ss_pred             -CCCCceECCCCcCCCc
Confidence             5678999999999974

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=1.1e-20  Score=217.34  Aligned_cols=254  Identities=22%  Similarity=0.289  Sum_probs=189.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeec-c-ccccc----hhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-V-FQDGE----KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~-~-~~~~~----~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+|.|++|.|+........   ...+.|.... . ....+    ..+..|+-+-..++|+|++..+..+.+.....-+
T Consensus       323 ~~~~g~ga~g~~~~~~~~~~~---~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~  399 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRSDL---KSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS  399 (601)
T ss_pred             cceeeecccCceEEEEecCCC---ccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence            467999999977776654322   2222222110 0 11111    1266788888899999999888888777776666


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||++. +|..++.....+....+..++.|++.|+.|+|.   .+|.|||||++|++++.++.+||+|||.+..+.....
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            999999 999999888788889999999999999999994   5999999999999999999999999999988765544


Q ss_pred             c--ceeecccccccccCcccccCCCCCCc-cchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          678 K--AIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       678 ~--~~~~~~~gt~~y~aPE~l~~~~~~~k-~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .  ......+|...|+|||.+....+++. .||||.|+++..|++|+.||.....++...     ...... ....+..+
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~~-~~~~~~~~  549 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNYS-DQRNIFEG  549 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhccc-cccccccC
Confidence            4  44566789999999999999988874 899999999999999999997655433221     000000 00111111


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .  .......+.+...++.++|+.+|.+|.|+++|++.
T Consensus       550 ~--~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  550 P--NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             h--HHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence            0  11122456677889999999999999999999863

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=2.3e-19  Score=180.57  Aligned_cols=260  Identities=20%  Similarity=0.279  Sum_probs=193.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +.+.++||+|.||+++.|+..-   .+.+||||.-...  ....++..|.+..+.| ..++|...+-|-.++.+-.||+|
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~---nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLY---NNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             ceeccccccCcceeeecccccc---cCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            5677999999999999998653   5789999986542  3345778888888887 47899999988899999999999


Q ss_pred             ecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-----CCCEEEeeccCccccc
Q 045343          600 FLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-----YYNARISDFGLAKLLT  673 (813)
Q Consensus       600 ~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~DfGla~~~~  673 (813)
                      .+ +-||+|++. ...+++.+++..+|.|++.-++|+|+   ...|+|||||+|+||..     ...+.|+|||+|+...
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            87 668888774 56789999999999999999999995   49999999999999963     3458999999999876


Q ss_pred             cCcccce-----eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          674 LNQSKAI-----RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       674 ~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      ....+..     ....-||.+||+-....+...+.+.|+-|+|-++++.|-|..||.+........--+.+.+..+.-.+
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i  260 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI  260 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence            5443321     22356999999999999999999999999999999999999999865433221111111111122222


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .++++.         .++++..-+.-.-..+-.+-|+.+-+...+..+++
T Consensus       261 ~~Lc~g---------~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld  301 (449)
T KOG1165|consen  261 EVLCEG---------FPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD  301 (449)
T ss_pred             HHHHhc---------CHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            222221         23444444444455677788888777766665543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.80  E-value=1.1e-18  Score=188.74  Aligned_cols=258  Identities=28%  Similarity=0.362  Sum_probs=195.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccC-CcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHK-NLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~l  596 (813)
                      +.+.+.||.|+||.||++...      ..+++|.+......   ....+.+|+.+++.+.|+ +++++.+++......++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEE
Confidence            456678999999999999874      67888988754333   256789999999999988 79999999977777899


Q ss_pred             EEeecCCCchhhhhhccC---CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFGNL---KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~  672 (813)
                      +++++.+++|.+++....   .+.......++.|++.++.|+|..   +++|||+||+||+++... .+++.|||+++..
T Consensus        76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~  152 (384)
T COG0515          76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLL  152 (384)
T ss_pred             EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence            999999999997776664   688999999999999999999954   899999999999999988 7999999999866


Q ss_pred             ccCcccc----eeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccch-hhhhhHHHHHHhhc
Q 045343          673 TLNQSKA----IRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILTDWAFDCYR  744 (813)
Q Consensus       673 ~~~~~~~----~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~  744 (813)
                      .......    ......|+..|+|||.+..   .......|+|++|++++++++|..|+...... ..............
T Consensus       153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  232 (384)
T COG0515         153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT  232 (384)
T ss_pred             CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence            5443221    2355679999999999987   57888999999999999999999997654421 00111111111110


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      . ...........    ......+.+++..|+..+|..|.++.+....
T Consensus       233 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         233 P-SLASPLSPSNP----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c-ccccccCcccc----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0 00000000000    1224577889999999999999999887764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=2.6e-19  Score=172.58  Aligned_cols=261  Identities=19%  Similarity=0.212  Sum_probs=194.1

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc-CCcceEEeEeecCCce
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEGQNR  594 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~  594 (813)
                      |....|.+.++||.|+||.+|.|...   ..+..||||.-+..  ....++..|..+.+.++| ..|..+..|..+...-
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i---~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~yn   86 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISI---TSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYN   86 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeec---cCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccc
Confidence            44456788999999999999999875   47889999987542  234467888888888875 6788888888899999


Q ss_pred             EEEEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC---CCEEEeeccCcc
Q 045343          595 LLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAK  670 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~---~~~kl~DfGla~  670 (813)
                      .|||+.. +-+|++++. ....++.++.+-++-|++.-++|+|.   .+++||||||+|+|..-+   ..+.++|||+|+
T Consensus        87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK  162 (341)
T KOG1163|consen   87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK  162 (341)
T ss_pred             eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchh
Confidence            9999987 668888774 45778999999999999999999995   499999999999999643   468999999999


Q ss_pred             ccccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          671 LLTLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       671 ~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      .+.......     ......||.+|.+-....+...+.+.|+-|+|.+|.++.-|..|+++........--+.+.+..-.
T Consensus       163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s  242 (341)
T KOG1163|consen  163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS  242 (341)
T ss_pred             hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence            875433221     123456999999988888888889999999999999999999999865543322211111111111


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      -.++.+..         ..+.++...+.-|-..--++-|....+.+.+.
T Consensus       243 ~~ie~LC~---------G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr  282 (341)
T KOG1163|consen  243 TPIEVLCK---------GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR  282 (341)
T ss_pred             CCHHHHhC---------CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence            11111111         23455666666777777777787766665553

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=6e-19  Score=193.56  Aligned_cols=218  Identities=26%  Similarity=0.433  Sum_probs=164.8

Q ss_pred             eeccccCCcceEEeEeecCCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCC
Q 045343          573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ  651 (813)
Q Consensus       573 l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~  651 (813)
                      |+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+.. ...++|.....++.+|++||.|||..  +-..|+.|+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s~   78 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKSS   78 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeeccc
Confidence            4678999999999999999999999999999999999987 56889999999999999999999963  33399999999


Q ss_pred             cEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCC-------CCCCccchhhHHHHHHHHHhCCcCC
Q 045343          652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-------TITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       652 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      |.++|..+.+||+|||+.................-..-|.|||.+...       ..+.+.||||||++++|+++.+.||
T Consensus        79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~  158 (484)
T KOG1023|consen   79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF  158 (484)
T ss_pred             cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence            999999999999999998876431111111222245569999998763       1467899999999999999999999


Q ss_pred             Ccccchhh-hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          725 DIEMGEEY-AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       725 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      +....... ..+...+.   .  .....+.+.+....  +..+.+..++..||..+|.+||+++.|-..++.+...
T Consensus       159 ~~~~~~~~~~eii~~~~---~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  159 DLRNLVEDPDEIILRVK---K--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ccccccCChHHHHHHHH---h--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            86433221 11111111   1  11112222222111  3345789999999999999999999999998876543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.76  E-value=1.8e-18  Score=171.93  Aligned_cols=141  Identities=16%  Similarity=0.131  Sum_probs=108.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc---------chhh-----------------hheeeeeeccc
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---------EKEF-----------------KNEVVVIGQTH  577 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~---------~~~~-----------------~~E~~~l~~l~  577 (813)
                      .+.||+|+||.||+|...    +++.||||+++......         ...|                 ..|++.+.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05147           2 NGCISTGKEANVYHATTA----NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV   77 (190)
T ss_pred             CCccccccceEEEEEECC----CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999873    67899999997532111         1122                 23888999998


Q ss_pred             cCCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       578 h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                      ++++.....+..  ...+|||||+++++|...+.....++.....+++.|++.+|.|||+  ..+|+||||||+|||++ 
T Consensus        78 ~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-  152 (190)
T cd05147          78 TAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-  152 (190)
T ss_pred             HCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-
Confidence            877644333322  2348999999998876654445678899999999999999999942  34999999999999998 


Q ss_pred             CCCEEEeeccCccccc
Q 045343          658 YYNARISDFGLAKLLT  673 (813)
Q Consensus       658 ~~~~kl~DfGla~~~~  673 (813)
                      ++.++|+|||+|....
T Consensus       153 ~~~v~LiDFG~a~~~~  168 (190)
T cd05147         153 DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             CCcEEEEEccccccCC
Confidence            4789999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.74  E-value=1.8e-18  Score=173.59  Aligned_cols=174  Identities=14%  Similarity=0.093  Sum_probs=130.9

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchh---------hhheeeeeeccccCCcceE
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---------FKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l  584 (813)
                      +++....+...+.||.|+||.||....     ++..+|||.+........+.         +.+|+..+.+++|++|..+
T Consensus        26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~  100 (232)
T PRK10359         26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL  100 (232)
T ss_pred             HHHhhCceEEEEEecCCCceEEEEEec-----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence            445566677889999999999998543     34579999996543222222         5789999999999999999


Q ss_pred             EeEeecC--------CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          585 LGFCDEG--------QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       585 ~g~~~~~--------~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      ..++...        ...+|||||++|.+|.++..    ++.    ....+++.+|..+|+.   +++|||+||+||+++
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~  169 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS  169 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence            9886533        35789999999999988732    222    3456899999999954   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHH
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII  718 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ell  718 (813)
                      .++ ++|+|||............              .+.....+..++|+|+||+.+..+.
T Consensus       170 ~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        170 KNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehHHH
Confidence            988 9999999887553221110              1233344667899999999888654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.73  E-value=1.7e-17  Score=165.46  Aligned_cols=142  Identities=16%  Similarity=0.072  Sum_probs=109.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--------------------------chhhhheeeeeeccc
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--------------------------EKEFKNEVVVIGQTH  577 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--------------------------~~~~~~E~~~l~~l~  577 (813)
                      .+.||+|++|.||+|...    +++.||||.++......                          ...+..|...+.++.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~----~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   77 (190)
T cd05145           2 NGCISTGKEANVYHARTG----DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY   77 (190)
T ss_pred             CceeecCCCcEEEEEEcC----CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999863    57899999987542110                          011346788888999


Q ss_pred             cCCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       578 h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                      |+++.....+...  ..+|||||++++++.........++.....+++.|++.++.+||+  ..+|+||||||+|||++ 
T Consensus        78 ~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-  152 (190)
T cd05145          78 EAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-  152 (190)
T ss_pred             hCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-
Confidence            9887544444332  348999999988654443344567788899999999999999996  14999999999999999 


Q ss_pred             CCCEEEeeccCcccccc
Q 045343          658 YYNARISDFGLAKLLTL  674 (813)
Q Consensus       658 ~~~~kl~DfGla~~~~~  674 (813)
                      ++.++|+|||++..+..
T Consensus       153 ~~~~~liDFG~a~~~~~  169 (190)
T cd05145         153 DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             CCCEEEEEcccceecCC
Confidence            78999999999987653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.73  E-value=8.6e-19  Score=200.22  Aligned_cols=252  Identities=23%  Similarity=0.267  Sum_probs=178.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeee--eeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVV--IGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...+.+.||.+.|=.|.|++..    +| .|+||++-+.. .-..+.|.++++-  ...++|||.+++.-.-..+.-.+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~----eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR----EG-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC----Cc-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHH
Confidence            4566789999999999999874    33 48899885433 2233444443332  445689999998887767777788


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc--c
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT--L  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~--~  674 (813)
                      |-+|..+ +|.|.|..+.-+..-+..-|+.|++.||.-+|+   .+|+|||||.+||||+.-.=+.|+||..-+...  .
T Consensus        99 vRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe  174 (1431)
T KOG1240|consen   99 VRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE  174 (1431)
T ss_pred             HHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence            8888866 899999888877888888899999999999994   599999999999999998889999998765432  1


Q ss_pred             Ccc---cceeecccccccccCcccccC----------CC-CCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHH
Q 045343          675 NQS---KAIRTAIRGTKGYVAPEWFRN----------ST-ITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       675 ~~~---~~~~~~~~gt~~y~aPE~l~~----------~~-~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  739 (813)
                      +..   .......+.-..|+|||.+..          .. .+++-||||+||++.||++ |+++|....      +..  
T Consensus       175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~a--  246 (1431)
T KOG1240|consen  175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLA--  246 (1431)
T ss_pred             CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHh--
Confidence            111   111122233457999997633          12 5778999999999999988 788886321      100  


Q ss_pred             HHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                         ++.+. ....+..++..    +...+..+++.|++.||.+|.++++.++.-.++
T Consensus       247 ---Yr~~~-~~~~e~~Le~I----ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  247 ---YRSGN-ADDPEQLLEKI----EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             ---HhccC-ccCHHHHHHhC----cCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence               01110 11111111111    123677899999999999999999999986654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2e-18  Score=188.89  Aligned_cols=229  Identities=22%  Similarity=0.223  Sum_probs=179.3

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--chhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEeecC
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      .+|+|.||.|+.+.-..+...+..+|.|.+++.....  ......|..++...+ |+.+|++.-.+..+...+++.+|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            3789999999876544444567778888886543221  113455667777776 9999999999999999999999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      +|.|...+.....+.......+...++-++.++|   ..+|+|||+|++||+++.+|++++.|||+++..-....     
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-----  152 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-----  152 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-----
Confidence            9999999998888888888888999999999999   56999999999999999999999999999987654322     


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccH
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI  762 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  762 (813)
                       .+||..|||||++.  .....+|-||||++++||+||..||..   +....                +....+  ..+.
T Consensus       153 -~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~----------------Il~~~~--~~p~  208 (612)
T KOG0603|consen  153 -ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKR----------------ILKAEL--EMPR  208 (612)
T ss_pred             -cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHH----------------Hhhhcc--CCch
Confidence             27999999999998  567889999999999999999999975   11111                111011  1123


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCH
Q 045343          763 KCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       763 ~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                      +....+.+++..++..+|..|.-.
T Consensus       209 ~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  209 ELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhhHHHHHHHHHHHhhCHHHHhcc
Confidence            445566677777888888888654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.68  E-value=1.4e-16  Score=164.74  Aligned_cols=227  Identities=22%  Similarity=0.281  Sum_probs=141.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccc----------cCCcceEEeEe--
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTH----------HKNLVRLLGFC--  588 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~l~g~~--  588 (813)
                      .+.||.|+++.||.+.+.   ++++..|||......   ....+++++|.-.+..+.          |-.++-.++..  
T Consensus        17 ~~~i~~g~~~~v~~v~d~---~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDV---ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEETTEEEEEEEET---TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             ccccccCCceEEEEEEEc---cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            467999999999999884   467899999885432   223345666654444432          22232222221  


Q ss_pred             -------ecC---C-----ceEEEEeecCCCchhhhhh---ccC----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeC
Q 045343          589 -------DEG---Q-----NRLLVYEFLNNGTLASFLF---GNL----KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC  646 (813)
Q Consensus       589 -------~~~---~-----~~~lV~e~~~~gsL~~~l~---~~~----~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~  646 (813)
                             ...   .     ..+++|+-+ .++|.+++.   ...    .+....++.+..|+++.+++||..   +++|+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg  169 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG  169 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred             cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence                   111   1     235667665 567777753   222    223445667788999999999954   99999


Q ss_pred             CCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccC--------CCCCCccchhhHHHHHHHHH
Q 045343          647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN--------STITAKVDVYSFGVLLLEII  718 (813)
Q Consensus       647 dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~k~DVwS~Gvvl~ell  718 (813)
                      ||+|+|++++.+|.++|+||+.........     .....+..|.+||....        ..++.+.|.|++|+++|.|.
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW  244 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW  244 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCcee-----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence            999999999999999999998876544221     11334577999997643        24678999999999999999


Q ss_pred             hCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCC
Q 045343          719 SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR  783 (813)
Q Consensus       719 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R  783 (813)
                      +++.||.....+.....                   .. .... +.++.+..|+..+|+.+|.+|
T Consensus       245 C~~lPf~~~~~~~~~~~-------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  245 CGRLPFGLSSPEADPEW-------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HSS-STCCCGGGSTSGG-------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HccCCCCCCCccccccc-------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            99999985533211100                   11 1123 567889999999999999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=5.9e-17  Score=159.07  Aligned_cols=185  Identities=16%  Similarity=0.055  Sum_probs=135.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc----chhhhheeeeeeccc-cCCcceEEeEeecCCceEEEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG----EKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ...|++|+||+||.+..     .+..++.+.++....-.    ...+.+|+++|++++ |+++++++++    +..+++|
T Consensus         7 ~~~l~~~~f~~v~~~~~-----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm   77 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR   77 (218)
T ss_pred             ceeecCCCcceEEEeec-----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence            46799999999996543     45667777776543211    124789999999995 5889999986    4579999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCC-CCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDI-KPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dl-k~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+.+.+|...+..       ....++.|++++|.++|..   +|+|||| ||+|||++.++.++|+|||++........
T Consensus        78 eyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~  147 (218)
T PRK12274         78 SYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR  147 (218)
T ss_pred             eeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence            99999998754321       1235778999999999954   9999999 79999999999999999999986553321


Q ss_pred             c----c-------eeecccccccccCcccccCC-CCC-CccchhhHHHHHHHHHhCCcCCCcc
Q 045343          678 K----A-------IRTAIRGTKGYVAPEWFRNS-TIT-AKVDVYSFGVLLLEIISCRKSFDIE  727 (813)
Q Consensus       678 ~----~-------~~~~~~gt~~y~aPE~l~~~-~~~-~k~DVwS~Gvvl~elltG~~p~~~~  727 (813)
                      .    .       .......++.|+.|+...-. ..+ ...+.++-|.-+|.++|++.+...+
T Consensus       148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            0    0       00112357778888754332 223 4578889999999999998876543

>PRK10345 hypothetical protein; Provisional

Probab=99.66  E-value=2.9e-16  Score=157.49  Aligned_cols=133  Identities=20%  Similarity=0.221  Sum_probs=102.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-----ccCCcceEEeEeecCC---c-eE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-----HHKNLVRLLGFCDEGQ---N-RL  595 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~---~-~~  595 (813)
                      +.||+|+||.||.  .+   .+. ..+||+.........+++.+|+.++.++     .||||++++|+++++.   . ..
T Consensus         8 ~~LG~G~~~~Vy~--hp---~~~-~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          8 SPLGTGRHRKCYA--HP---EDA-QRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             ceecCCCceEEEE--CC---CCc-CeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            6799999999995  32   233 3468887654344566799999999999     5799999999998874   2 33


Q ss_pred             EEEee--cCCCchhhhhhccCCCCHHHHHHHHHHHHHHH-HHhhhcCCCCeeeCCCCCCcEEEcC----CCCEEEeeccC
Q 045343          596 LVYEF--LNNGTLASFLFGNLKPSWNLRTNIAFQIARGL-LYLHEDCSAQIIHCDIKPQNILLDD----YYNARISDFGL  668 (813)
Q Consensus       596 lV~e~--~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl-~yLH~~~~~~ivH~dlk~~NIll~~----~~~~kl~DfGl  668 (813)
                      +|+||  +++++|.+++... .+++.  ..++.+++.++ +|||++   +|+||||||+|||++.    +..++|+||+.
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            78999  5679999999664 35544  35677888777 899965   9999999999999973    34799999544


Q ss_pred             c
Q 045343          669 A  669 (813)
Q Consensus       669 a  669 (813)
                      +
T Consensus       156 ~  156 (210)
T PRK10345        156 E  156 (210)
T ss_pred             C
Confidence            4

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.64  E-value=5.5e-16  Score=181.65  Aligned_cols=200  Identities=23%  Similarity=0.209  Sum_probs=157.2

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc---cCCcceEEeEeec
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDE  590 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~  590 (813)
                      -++....+.+.++||+|+||+||+|...    +++.||+|+-+-..   .-+|.--.+++.+|+   -+-|+.+...+.-
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~----~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHS----NGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecC----CCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            3444555667789999999999999875    47899999865432   223332233344444   2234444444556


Q ss_pred             CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-------CCCCEEE
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-------DYYNARI  663 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-------~~~~~kl  663 (813)
                      .+..+||+||.+-|+|.+++...+..+|.....++.|+++.+.+||.   .+|||+||||+|.||.       +...++|
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEE
Confidence            67789999999999999999998999999999999999999999995   4999999999999994       3456999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcC
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS  723 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p  723 (813)
                      +|||-+.-+..-.........++|-.+--+|...+..++.++|.|.|..+++-||-|+..
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            999999766533222234566789999999999999999999999999999999998753

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.62  E-value=8.3e-17  Score=173.06  Aligned_cols=172  Identities=27%  Similarity=0.372  Sum_probs=128.4

Q ss_pred             ceEEEEeecCCCchhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      .+++.|+++...+|.+||.++   ...++...+.++.|++.|+.|      ++.+|+|+||.||+...+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            468999999999999999754   356889999999999999999      38899999999999999999999999998


Q ss_pred             cccccCc----ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhc
Q 045343          670 KLLTLNQ----SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       670 ~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      .......    .....+...||..||+||.+.+..++.|+||||||++|+||+. -..+++..                 
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------------  466 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------------  466 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------------
Confidence            7766544    1112345679999999999999999999999999999999987 33332210                 


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV  789 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  789 (813)
                       ..+.++-+..+..... .....-..|+.+++.+.|.+||++.++
T Consensus       467 -~t~~d~r~g~ip~~~~-~d~p~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  467 -ATLTDIRDGIIPPEFL-QDYPEEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             -HhhhhhhcCCCChHHh-hcCcHHHHHHHHhcCCCcccCchHHHH
Confidence             0111111111110001 111233478889999999999955443

>smart00090 RIO RIO-like kinase

Probab=99.62  E-value=1.6e-15  Score=155.87  Aligned_cols=143  Identities=17%  Similarity=0.166  Sum_probs=109.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------------------------cchhhhheeeeeecc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------------------------GEKEFKNEVVVIGQT  576 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l  576 (813)
                      +.+.+.||+|++|.||+|...  ..++..||||.++.....                        ....+..|+..+.++
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~--~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDF--DGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             HHhCCeeccCcceeEEEEEec--CCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999721  136789999998743210                        001246799999999


Q ss_pred             ccCC--cceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeeCCCCCCcE
Q 045343          577 HHKN--LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ-IIHCDIKPQNI  653 (813)
Q Consensus       577 ~h~n--iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~-ivH~dlk~~NI  653 (813)
                      .+..  +.+++++    ...++||||+++.+|.........+.......++.||+.++.+||+.   + ++|+||||+||
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NI  180 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNI  180 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhE
Confidence            7533  4455543    23589999999999877664444556666788999999999999954   8 99999999999


Q ss_pred             EEcCCCCEEEeeccCccccc
Q 045343          654 LLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~  673 (813)
                      +++ ++.++|+|||.+....
T Consensus       181 li~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      181 LVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EEE-CCCEEEEEChhhhccC
Confidence            999 8899999999987543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=2.4e-15  Score=152.81  Aligned_cols=134  Identities=20%  Similarity=0.257  Sum_probs=111.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--------cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      +.||+|++|.||+|..     .+..++||+.......        ....+.+|+.++..++|+++.....++...+..++
T Consensus         2 ~~l~~G~~~~vy~~~~-----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l   76 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFII   76 (211)
T ss_pred             cccccCceEEEEEEee-----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEE
Confidence            5799999999999976     4556888876432111        11357789999999999999888888777788999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ||||+++++|.+++.....    .+..++.+++.+|.+||+   .+++|+|++|.|||++ ++.++|+|||.+..
T Consensus        77 v~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         77 VMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999999999865432    788999999999999995   4999999999999999 78999999999865

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.59  E-value=3.9e-15  Score=149.87  Aligned_cols=130  Identities=20%  Similarity=0.296  Sum_probs=105.2

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--------cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .||+|+||.||+|..     .+..++||+.......        ...++.+|++++..++|+++.....++...+..++|
T Consensus         1 ~ig~G~~~~vy~~~~-----~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv   75 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-----LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIV   75 (199)
T ss_pred             CCCCCceEEEEEeec-----CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
Confidence            489999999999985     4567888886432111        124567899999999988766655566666778999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      |||+++++|.+++.....       .++.+++++|.+||+   .+++|+|++|+||+++ ++.++++|||++..
T Consensus        76 ~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999999988754321       789999999999995   5999999999999999 88999999999875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.58  E-value=7.5e-15  Score=170.05  Aligned_cols=133  Identities=17%  Similarity=0.276  Sum_probs=107.3

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEe-ecccc-------ccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQ-------DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l-~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ..+.||+|+||+||+|...     +..+++|+. .+...       ...+++.+|++++.+++|++++....++...+..
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~-----~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYL-----GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             ccceeccCCcEEEEEEeec-----CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            4578999999999999874     223333332 11111       1124578999999999999999888888877888


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++||||+++++|.+++.        ....++.+++++|.|||+   .+++||||||+|||+ +++.++|+|||+++..
T Consensus       412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            99999999999998875        457789999999999995   499999999999999 6779999999999764

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=1.1e-14  Score=150.03  Aligned_cols=197  Identities=23%  Similarity=0.264  Sum_probs=133.5

Q ss_pred             ccCCcceEEeEee---------------------------cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHH
Q 045343          577 HHKNLVRLLGFCD---------------------------EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA  629 (813)
Q Consensus       577 ~h~niv~l~g~~~---------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia  629 (813)
                      +|||||++.++|.                           ++..+++||...+. +|..++..+.. +.....-|+.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~-s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHR-SYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCC-chHHHHHHHHHHH
Confidence            6888888887652                           22346788876644 88888876654 4455666889999


Q ss_pred             HHHHHhhhcCCCCeeeCCCCCCcEEE--cCCC--CEEEeeccCccccccCc--ccc--eeecccccccccCcccccCCC-
Q 045343          630 RGLLYLHEDCSAQIIHCDIKPQNILL--DDYY--NARISDFGLAKLLTLNQ--SKA--IRTAIRGTKGYVAPEWFRNST-  700 (813)
Q Consensus       630 ~gl~yLH~~~~~~ivH~dlk~~NIll--~~~~--~~kl~DfGla~~~~~~~--~~~--~~~~~~gt~~y~aPE~l~~~~-  700 (813)
                      +|+.|||++   +|.|||+|+.||||  |++.  .+.|+|||..---....  -..  ......|...-||||+....+ 
T Consensus       352 Eav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  352 EAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            999999965   99999999999999  3443  47899999764322110  000  012234677889999886432 


Q ss_pred             -----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHh
Q 045343          701 -----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWC  775 (813)
Q Consensus       701 -----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C  775 (813)
                           --.|+|.|+.|.+.||++....||....+ -....     ..+.+..+..+.+         .++..+.+++...
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~-----r~Yqe~qLPalp~---------~vpp~~rqlV~~l  493 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDT-----RTYQESQLPALPS---------RVPPVARQLVFDL  493 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccccch-heech-----hhhhhhhCCCCcc---------cCChHHHHHHHHH
Confidence                 23589999999999999999999985221 10000     1122222222211         3456678888999


Q ss_pred             cccCCCCCCCHHHHHHHH
Q 045343          776 IQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       776 l~~dP~~RPt~~evl~~L  793 (813)
                      |+.||.+|++..=..+.|
T Consensus       494 L~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  494 LKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             hcCCccccCCccHHHhHH
Confidence            999999999986655554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.56  E-value=1e-14  Score=146.64  Aligned_cols=137  Identities=17%  Similarity=0.160  Sum_probs=105.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc----------------------cchhhhheeeeeecccc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD----------------------GEKEFKNEVVVIGQTHH  578 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~E~~~l~~l~h  578 (813)
                      +.+.+.||+|+||.||++...    ++..||||++......                      ....+..|+.++..+.|
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP----DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC----CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence            566789999999999999763    5788999986532100                      01125678888888877


Q ss_pred             C--CcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          579 K--NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       579 ~--niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      +  .++..++.    ...++||||+++++|......      .....++.++++++.++|+   .+++|+||||+||+++
T Consensus        93 ~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~  159 (198)
T cd05144          93 EGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVD  159 (198)
T ss_pred             cCCCCCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEc
Confidence            7  44555542    345899999999998776431      3456788999999999996   4999999999999999


Q ss_pred             CCCCEEEeeccCcccccc
Q 045343          657 DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~  674 (813)
                      +++.++|+|||++.....
T Consensus       160 ~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         160 DDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CCCcEEEEECCccccCCC
Confidence            999999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.51  E-value=1.8e-14  Score=165.53  Aligned_cols=208  Identities=23%  Similarity=0.277  Sum_probs=137.8

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.++.|..|++|.||...+.   ...+..|+|. .+...    -.++   ++.....|.+|                   
T Consensus        86 ~~IklisngAygavylvrh~---~trqrfa~ki-Nkq~l----ilRn---ilt~a~npfvv-------------------  135 (1205)
T KOG0606|consen   86 NTIKLISNGAYGAVYLVRHK---ETRQRFAMKI-NKQNL----ILRN---ILTFAGNPFVV-------------------  135 (1205)
T ss_pred             ceeEeeccCCCCceeeeecc---ccccchhhcc-cccch----hhhc---cccccCCccee-------------------
Confidence            34578999999999998764   2345566633 22110    0111   22222233222                   


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc-----
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ-----  676 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~-----  676 (813)
                        |+=...++..+.++...        +.+++|||   +.+|+|||+||+|.+|+.-|++|+.|||+++......     
T Consensus       136 --gDc~tllk~~g~lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~  202 (1205)
T KOG0606|consen  136 --GDCATLLKNIGPLPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK  202 (1205)
T ss_pred             --chhhhhcccCCCCcchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence              33344444444444333        67899999   5699999999999999999999999999987542111     


Q ss_pred             -------c-cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          677 -------S-KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       677 -------~-~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                             . .......+||+.|+|||++..+.|...+|.|++|+|+||.+-|+.||.++.+++-..  ..+.+..     
T Consensus       203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg--~visd~i-----  275 (1205)
T KOG0606|consen  203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG--QVISDDI-----  275 (1205)
T ss_pred             hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh--hhhhhhc-----
Confidence                   0 011123579999999999999999999999999999999999999999876654221  1111110     


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                       ...+.      ......++.+++.+.|+.+|..|--.
T Consensus       276 -~wpE~------dea~p~Ea~dli~~LL~qnp~~Rlgt  306 (1205)
T KOG0606|consen  276 -EWPEE------DEALPPEAQDLIEQLLRQNPLCRLGT  306 (1205)
T ss_pred             -ccccc------CcCCCHHHHHHHHHHHHhChHhhccc
Confidence             00011      11234667788889999999999643

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.48  E-value=1.4e-13  Score=131.29  Aligned_cols=135  Identities=22%  Similarity=0.164  Sum_probs=114.0

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc--CCcceEEeEeecCCceEEEEeec
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      .+.||+|.++.||++...     +..++||.......  ..++..|+.++..++|  .++++++++....+..++++||+
T Consensus         3 ~~~i~~g~~~~v~~~~~~-----~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-----DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             ceecccccccceEEEEec-----CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            467999999999999873     36789998765322  4578999999999987  58999999988888899999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      +++.+..+       +......++.++++++++||.....+++|+|++|+||+++..+.+++.|||.+...
T Consensus        76 ~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          76 EGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             CCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            99887654       55677788999999999999754467999999999999999899999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.45  E-value=2.2e-13  Score=135.65  Aligned_cols=138  Identities=20%  Similarity=0.183  Sum_probs=94.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--chhh----------------------hheeeeeeccccC
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEF----------------------KNEVVVIGQTHHK  579 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--~~~~----------------------~~E~~~l~~l~h~  579 (813)
                      .+.||+|+||.||+|...    ++..||||++.......  ...+                      ..|...+.++.+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~----~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~   77 (187)
T cd05119           2 GGPIGTGKEADVYLALDG----DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA   77 (187)
T ss_pred             CcccccccceeEEEEECC----CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence            467999999999999864    56789999876432111  1111                      2334444444333


Q ss_pred             --CcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          580 --NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       580 --niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                        .+.+.+++    ...++||||++++.+........... .....++.+++.++.++|.  ..+|+|+||||+||+++ 
T Consensus        78 ~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-  149 (187)
T cd05119          78 GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-  149 (187)
T ss_pred             CCCCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-
Confidence              23444433    24689999999954432211111111 5677899999999999995  15999999999999999 


Q ss_pred             CCCEEEeeccCccccc
Q 045343          658 YYNARISDFGLAKLLT  673 (813)
Q Consensus       658 ~~~~kl~DfGla~~~~  673 (813)
                      ++.++|+|||.+....
T Consensus       150 ~~~~~liDfg~a~~~~  165 (187)
T cd05119         150 DGKVYIIDVPQAVEID  165 (187)
T ss_pred             CCcEEEEECccccccc
Confidence            8999999999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=2e-14  Score=165.74  Aligned_cols=256  Identities=23%  Similarity=0.316  Sum_probs=187.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccc-cCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+|+.|-......  .....+|+|.+....  ....+....|..+-..+. |+|++++++...+.+..++
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~--~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSR--DPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccchhhhhhhcC--CCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            35566779999999998766532  244567777775443  122234455777777776 9999999999999999999


Q ss_pred             EEeecCCCchhhhh-hccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccc
Q 045343          597 VYEFLNNGTLASFL-FGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLT  673 (813)
Q Consensus       597 V~e~~~~gsL~~~l-~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~  673 (813)
                      +.+|..++++.+.+ .... ..+......++.|+..++.|+|.  ..++.|+|+||+|.+++..+ ..+++|||+|..+.
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR  176 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence            99999999999988 5544 55666777889999999999993  24899999999999999999 99999999999887


Q ss_pred             c-Ccccceeecccc-cccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          674 L-NQSKAIRTAIRG-TKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       674 ~-~~~~~~~~~~~g-t~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      . ...........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++......... ..|     ....   
T Consensus       177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~-----~~~~---  247 (601)
T KOG0590|consen  177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSW-----KSNK---  247 (601)
T ss_pred             ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-eee-----cccc---
Confidence            7 444444455678 9999999999885 45678999999999999999999987544322110 000     0000   


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                        .. ..............++...++..+|..|.+.+++..
T Consensus       248 --~~-~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  248 --GR-FTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             --cc-cccCccccCChhhhhcccccccCCchhccccccccc
Confidence              00 000001122345567777888899999999888754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.42  E-value=6.7e-13  Score=136.81  Aligned_cols=135  Identities=18%  Similarity=0.123  Sum_probs=102.7

Q ss_pred             cccc-eeeeeeEEEEEEeccCCcceEEEEEEeeccc-------------cccchhhhheeeeeeccccCCc--ceEEeEe
Q 045343          525 EEVG-RGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-------------QDGEKEFKNEVVVIGQTHHKNL--VRLLGFC  588 (813)
Q Consensus       525 ~~LG-~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~  588 (813)
                      ..|| .|+.|+||++..     .+..++||+.+...             ......+.+|++++.+++|++|  ++.+++.
T Consensus        37 ~~lg~~~g~gtv~~v~~-----~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT-----PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEe-----CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence            4677 788889998876     35678888875311             0122457889999999998875  6777775


Q ss_pred             ecCCc----eEEEEeecCC-CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          589 DEGQN----RLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       589 ~~~~~----~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      .....    .++|+|++++ .+|.+++... .++..    .+.+|+.+|.+||+.   +|+|+||||+|||++.++.++|
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L  183 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL  183 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence            44322    3599999997 6898887543 33433    367899999999954   9999999999999999889999


Q ss_pred             eeccCcccc
Q 045343          664 SDFGLAKLL  672 (813)
Q Consensus       664 ~DfGla~~~  672 (813)
                      +|||.+...
T Consensus       184 IDfg~~~~~  192 (239)
T PRK01723        184 IDFDRGELR  192 (239)
T ss_pred             EECCCcccC
Confidence            999998753

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=4.4e-12  Score=128.41  Aligned_cols=199  Identities=22%  Similarity=0.287  Sum_probs=137.8

Q ss_pred             eeccccCCcceEEeEeec-----CCceEEEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 045343          573 IGQTHHKNLVRLLGFCDE-----GQNRLLVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQI  643 (813)
Q Consensus       573 l~~l~h~niv~l~g~~~~-----~~~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i  643 (813)
                      |-++-|.|||++..|..+     ..+..+++|||..|+|..+|+..    ..+......+++-||..||.|||.. .+.|
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi  199 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence            335579999999998743     33578999999999999999753    4566777788999999999999964 8999


Q ss_pred             eeCCCCCCcEEEcCCCCEEEeeccCccccccCcc---cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhC
Q 045343          644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS---KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISC  720 (813)
Q Consensus       644 vH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG  720 (813)
                      +|+++..+.|++..++-+||.- +..........   ........+-++|.+||.-...+.+..+|||+||+..+||.-+
T Consensus       200 ihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail  278 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL  278 (458)
T ss_pred             ccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence            9999999999999998888753 21111111110   0111223467899999988877888899999999999999876


Q ss_pred             CcCCC-cccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          721 RKSFD-IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       721 ~~p~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ..-.. .....+            .++.+...+.. +.       -..-..++..|++..|..||+|.+++.+.
T Consensus       279 Eiq~tnseS~~~------------~ee~ia~~i~~-le-------n~lqr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  279 EIQSTNSESKVE------------VEENIANVIIG-LE-------NGLQRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             eeccCCCcceee------------hhhhhhhheee-cc-------CccccCcCcccccCCCCCCcchhhhhcCc
Confidence            54321 111100            00111111110 00       01113567789999999999999988764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.19  E-value=4.2e-11  Score=134.25  Aligned_cols=140  Identities=21%  Similarity=0.231  Sum_probs=95.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc----------------------------------------ch
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG----------------------------------------EK  564 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~  564 (813)
                      +.||.|++|.||+|.+.    +++.||||+.+......                                        +-
T Consensus       123 ~plasaSigQVh~A~l~----~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV----DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             cceeeeehhheEEEEec----CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            46999999999999985    67899999975321100                                        00


Q ss_pred             hhhheeeeeecc----ccCCcceEEeEe-ecCCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHH-HHHHhhh
Q 045343          565 EFKNEVVVIGQT----HHKNLVRLLGFC-DEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIAR-GLLYLHE  637 (813)
Q Consensus       565 ~~~~E~~~l~~l----~h~niv~l~g~~-~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~-gl~yLH~  637 (813)
                      +|.+|...+.++    +|.+-+.+-..+ ......+|||||+++++|.++.... ...   .+.+++..+++ .+..+|+
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLR  275 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHh
Confidence            133344444444    233333333333 2234679999999999998876432 112   24456666666 3567784


Q ss_pred             cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       638 ~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                         .+++|+|+||.||+++.++.++++|||++..+..
T Consensus       276 ---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 ---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence               4999999999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.12  E-value=2e-10  Score=112.17  Aligned_cols=130  Identities=19%  Similarity=0.132  Sum_probs=96.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcc-eEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV-RLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.|+.|.++.||++..     .+..+++|....... ....+..|..++..+.+.+++ +++.+.  ....++||||+++
T Consensus         4 ~~l~~G~~~~vy~~~~-----~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G   75 (170)
T cd05151           4 SPLKGGMTNKNYRVEV-----ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG   75 (170)
T ss_pred             eecCCcccCceEEEEE-----CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence            5789999999999876     356799998754321 234567899999988766654 455443  2346899999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC--SAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .++.+..        .....++.+++++|+.||...  ...++|+|++|.||+++ ++.++++||+.+..
T Consensus        76 ~~l~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          76 SELLTED--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             Ccccccc--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            8876530        112345678999999999642  22469999999999999 66899999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=8.9e-11  Score=129.55  Aligned_cols=256  Identities=23%  Similarity=0.254  Sum_probs=181.3

Q ss_pred             HHHHHHHHhhcccccce--eeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc-ccCCcceEEeE
Q 045343          513 YKELEEATDNFKEEVGR--GSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT-HHKNLVRLLGF  587 (813)
Q Consensus       513 ~~el~~~~~~~~~~LG~--G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~  587 (813)
                      ..+.......+.+.+|.  |.+|.||.+...+ ..+...+|+|+-+....  .....=.+|.....++ .|+|.++....
T Consensus       108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~-~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTN-SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA  186 (524)
T ss_pred             ccchhhhhcccccccccCCCCCceeecccCCc-ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc
Confidence            44566666777889999  9999999987743 35677899998554332  2233334566555566 49999998888


Q ss_pred             eecCCceEEEEeecCCCchhhhhhccCC-CCHHHHHHHHHHHHH----HHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCE
Q 045343          588 CDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIAR----GLLYLHEDCSAQIIHCDIKPQNILLDDY-YNA  661 (813)
Q Consensus       588 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~-l~~~~~~~i~~~ia~----gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~  661 (813)
                      .++.+..++-+|++. .+|..+.+.... ++....+....+...    ||.++|   +..++|-|+||.||++..+ ...
T Consensus       187 ~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~  262 (524)
T KOG0601|consen  187 WEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSC  262 (524)
T ss_pred             cccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheeccccccee
Confidence            889999999999875 677777665433 566677777777777    999999   5699999999999999998 889


Q ss_pred             EEeeccCccccccCccc-c--eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHH
Q 045343          662 RISDFGLAKLLTLNQSK-A--IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW  738 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~-~--~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~  738 (813)
                      ++.|||+...+...... .  ......|...|++||.+++ .++...|+|++|.+..+..++.+.....--..       
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-------  334 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-------  334 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-------
Confidence            99999999887755421 1  1122357888999998765 46788999999999999998877654321111       


Q ss_pred             HHHhhccCcc-cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          739 AFDCYRNEKL-DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       739 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                       |...+...+ .+.++         .-..++...+..+++.+|..|++.+.+..
T Consensus       335 -W~~~r~~~ip~e~~~---------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  335 -WSQLRQGYIPLEFCE---------GGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             -ccccccccCchhhhc---------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence             111111110 01111         11234444788899999999999877664

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.01  E-value=3.7e-10  Score=90.76  Aligned_cols=56  Identities=21%  Similarity=0.378  Sum_probs=44.5

Q ss_pred             eeeeeeecccCCCCCcccc-ccCChhhhHHhhcccCCeeeEEecC----ceeeeeccCCCC
Q 045343          365 FDFHELQLTNWHLSDSERF-RPYNEVQCKNSCLSDCFCAAVIFQD----DCCWFKKLPLSN  420 (813)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~-~~~s~~~C~~~Cl~nCsC~A~~~~~----~~C~~~~~~l~~  420 (813)
                      ++|++++++.+|..+.... .++++++|+..||+||||+||+|.+    ++|++|...|.+
T Consensus         5 d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d   65 (66)
T PF08276_consen    5 DGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD   65 (66)
T ss_pred             CEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence            4778888888776654432 6699999999999999999999974    569999776653

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.98  E-value=3.6e-10  Score=128.14  Aligned_cols=142  Identities=15%  Similarity=0.128  Sum_probs=87.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc----------------------------------cch------
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD----------------------------------GEK------  564 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~----------------------------------~~~------  564 (813)
                      +.||.|++|.||+|.+..   +++.||||+.+.....                                  -.+      
T Consensus       125 ~PlasaSiaQVh~A~l~~---~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~El  201 (537)
T PRK04750        125 KPLASASIAQVHFARLKD---NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDEL  201 (537)
T ss_pred             hhhcCCCccEEEEEEECC---CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhh
Confidence            469999999999999852   3789999998632100                                  011      


Q ss_pred             hhhheeeeeeccc----cCCcceEEeEeec-CCceEEEEeecCCCchhhhh--hccCCCCHHHHHHHHHHHHHHHHHhhh
Q 045343          565 EFKNEVVVIGQTH----HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHE  637 (813)
Q Consensus       565 ~~~~E~~~l~~l~----h~niv~l~g~~~~-~~~~~lV~e~~~~gsL~~~l--~~~~~l~~~~~~~i~~~ia~gl~yLH~  637 (813)
                      ++.+|..-+.+++    +.+.+.+-.++.+ ....+|||||++|+.+.++.  .... .+.   ..++...++.  |+++
T Consensus       202 D~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~---~~la~~~v~~--~~~Q  275 (537)
T PRK04750        202 DLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDM---KLLAERGVEV--FFTQ  275 (537)
T ss_pred             CHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCH---HHHHHHHHHH--HHHH
Confidence            1233333333332    3333433333332 44678999999999998752  2221 111   1122222211  1221


Q ss_pred             cCCCCeeeCCCCCCcEEEcCCC----CEEEeeccCccccccC
Q 045343          638 DCSAQIIHCDIKPQNILLDDYY----NARISDFGLAKLLTLN  675 (813)
Q Consensus       638 ~~~~~ivH~dlk~~NIll~~~~----~~kl~DfGla~~~~~~  675 (813)
                      -...+++|+|+||.||+++.++    .+++.|||+...+...
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            1234999999999999999888    9999999999877543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.96  E-value=5.8e-09  Score=116.28  Aligned_cols=165  Identities=17%  Similarity=0.186  Sum_probs=121.5

Q ss_pred             CcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHH
Q 045343          545 TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI  624 (813)
Q Consensus       545 ~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i  624 (813)
                      .++.+|.|...+...........+-++.|+.++||||++++...+++...|||+|.+.-  |..++....   .....-.
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l~---~~~v~~G  109 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKELG---KEEVCLG  109 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHhH---HHHHHHH
Confidence            46778888888765543344567778889999999999999999999999999998643  444554332   3444556


Q ss_pred             HHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCc
Q 045343          625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK  704 (813)
Q Consensus       625 ~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k  704 (813)
                      +.||+.||.+||+  ..+++|++|....|+++..|+.||++|.+.........  ......--..|..|+.+....  -.
T Consensus       110 l~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s  183 (690)
T KOG1243|consen  110 LFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WS  183 (690)
T ss_pred             HHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cc
Confidence            8899999999997  46899999999999999999999999988754332111  011112233456666543322  35


Q ss_pred             cchhhHHHHHHHHHhC
Q 045343          705 VDVYSFGVLLLEIISC  720 (813)
Q Consensus       705 ~DVwS~Gvvl~elltG  720 (813)
                      .|.|.||++++|++.|
T Consensus       184 ~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  184 IDSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhhHHHHHHHHhCc
Confidence            7999999999999999

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=98.96  E-value=9e-10  Score=93.90  Aligned_cols=71  Identities=18%  Similarity=0.305  Sum_probs=53.8

Q ss_pred             ceeeeeeecccCCCCCccccccCChhhhHHhhcccCCeeeEEecC--ceeeeeccCCCCCcccccccccccccc
Q 045343          364 LFDFHELQLTNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQD--DCCWFKKLPLSNGMTDGRLTSKAFMKY  435 (813)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~A~~~~~--~~C~~~~~~l~~~~~~~~~~~~~~lkl  435 (813)
                      .+.|+.+..+.++...... .++++++|++.|++||+|+||+|.+  ++|++|..++.+.+.........|+|+
T Consensus        11 ~~~f~~~~~~~~~~~~~~~-~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~yiKv   83 (84)
T cd01098          11 TDGFLKLPDVKLPDNASAI-TAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSLSSGGGTLYLRL   83 (84)
T ss_pred             CCEEEEeCCeeCCCchhhh-ccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEeecCCCcEEEEEe
Confidence            3567778877777554443 6789999999999999999999974  679999887777655433345677765

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.87  E-value=1.4e-08  Score=100.16  Aligned_cols=141  Identities=16%  Similarity=0.208  Sum_probs=97.7

Q ss_pred             cccceeeeeeEEEEEEecc---CCcceEEEEEEeecccc----------cc------------chhhh----heeeeeec
Q 045343          525 EEVGRGSFGIVYKGVILTT---RTSTTAVAVKKLDRVFQ----------DG------------EKEFK----NEVVVIGQ  575 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~---~~~~~~vavK~l~~~~~----------~~------------~~~~~----~E~~~l~~  575 (813)
                      ..||.|--+.||.|.....   ...+..+|||..+....          +.            .+.+.    +|.+.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            4688999999999975311   01346899998753210          00            11122    68888888


Q ss_pred             ccc--CCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeeCCCCCCc
Q 045343          576 THH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL-HEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       576 l~h--~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yL-H~~~~~~ivH~dlk~~N  652 (813)
                      +..  -++.+++++    ...+|||||+.+..+..-.-....++......+..+++.+|..| |+   .+++|+||++.|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~~N  155 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSEYN  155 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence            853  466677765    56789999998754432222222344455677889999999999 64   499999999999


Q ss_pred             EEEcCCCCEEEeeccCccccc
Q 045343          653 ILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~  673 (813)
                      ||+++ +.+.|+|||.+....
T Consensus       156 IL~~~-~~v~iIDF~qav~~~  175 (197)
T cd05146         156 MLWHD-GKVWFIDVSQSVEPT  175 (197)
T ss_pred             EEEEC-CcEEEEECCCceeCC
Confidence            99974 689999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.86  E-value=1.3e-08  Score=104.10  Aligned_cols=142  Identities=18%  Similarity=0.211  Sum_probs=108.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeecccc--CCcceEEeEeecCC---ceEEEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHH--KNLVRLLGFCDEGQ---NRLLVY  598 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~---~~~lV~  598 (813)
                      +.|+.|..+.||++...    ++..+++|....... ....++..|.++++.+++  .++.+++.+..+..   ..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~----~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG----GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEec----CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence            56899999999998763    346789998754322 134578899999999876  44677888876643   568999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC---------------------------------------  639 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~---------------------------------------  639 (813)
                      ||+++.+|.+.+.. ..++...+..++.++++.|..||+..                                       
T Consensus        80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (223)
T cd05154          80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME  158 (223)
T ss_pred             EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence            99999988776532 34566777788888888888888420                                       


Q ss_pred             --------------CCCeeeCCCCCCcEEEcC--CCCEEEeeccCccc
Q 045343          640 --------------SAQIIHCDIKPQNILLDD--YYNARISDFGLAKL  671 (813)
Q Consensus       640 --------------~~~ivH~dlk~~NIll~~--~~~~kl~DfGla~~  671 (813)
                                    ...++|+|+++.||+++.  ++.+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                          245799999999999998  66789999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.85  E-value=1.5e-09  Score=119.89  Aligned_cols=246  Identities=20%  Similarity=0.207  Sum_probs=169.8

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhh--hheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF--KNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~--~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ++...||.|.|+.|++....  ..++..+++|.+.........+.  ..|+.+...+ .|.++++........+..++=-
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r--~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~  345 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKR--PEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL  345 (524)
T ss_pred             ceeEEccCCccccceeeeec--CCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence            44568999999999987632  24677889998865433222221  2344444444 5888888888777888888999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGla~~~~~~~~  677 (813)
                      ||++++++...+.-...++...++++..|++.++.++|   ++.++|+|+||+||++..+ +..++.|||.+..+.....
T Consensus       346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~  422 (524)
T KOG0601|consen  346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG  422 (524)
T ss_pred             hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccceecc
Confidence            99999998887755566778888999999999999999   6799999999999999876 8889999999875332211


Q ss_pred             cceeecccccccc-cCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGY-VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y-~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....+..| .+++......+-.+.|+++||.-+.|.+++........                  ....+.....
T Consensus       423 ----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~------------------~~~~i~~~~~  480 (524)
T KOG0601|consen  423 ----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV------------------QSLTIRSGDT  480 (524)
T ss_pred             ----cccccccccccchhhccccccccccccccccccccccccCcccCcccc------------------cceeeecccc
Confidence                111123333 35555566678889999999999999988765432110                  0111111111


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....  .....+..+...++.+++..||.+.++..+.+-.
T Consensus       481 p~~~--~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  481 PNLP--GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             cCCC--chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            1111  1124555666778899999999999888776543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.83  E-value=3.5e-08  Score=106.63  Aligned_cols=167  Identities=20%  Similarity=0.254  Sum_probs=128.2

Q ss_pred             eeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee----cCCceEEEEeecCC-Cch
Q 045343          532 FGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD----EGQNRLLVYEFLNN-GTL  606 (813)
Q Consensus       532 fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----~~~~~~lV~e~~~~-gsL  606 (813)
                      -.+.||+...   .+|..+.+|+++............-++.++++.|.|+|++..++.    .+..+++||+|.++ ++|
T Consensus       289 ~~Ttyk~~s~---~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  289 SITTYKATSN---VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             cceeEeeeec---cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence            3578898774   477889999995543333333344567788999999999999885    45578999999987 578


Q ss_pred             hhhhhcc---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          607 ASFLFGN---------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       607 ~~~l~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .+.-+..               ...++...|.++.|++.||.++|+.   |..-+-|.+++||++.+.+++|+..|....
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv  442 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV  442 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence            7765422               2356889999999999999999954   888899999999999999999999998877


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcC
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS  723 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p  723 (813)
                      +..+....                +   .-..+-|.=.||.+++.|.||...
T Consensus       443 l~~d~~~~----------------l---e~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  443 LQEDPTEP----------------L---ESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             ecCCCCcc----------------h---hHHhhhhHHHHHHHHHHHhhcccc
Confidence            66543111                1   113467899999999999998643

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.77  E-value=3.2e-08  Score=94.10  Aligned_cols=131  Identities=21%  Similarity=0.344  Sum_probs=97.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEE-eeccccc-------cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKK-LDRVFQD-------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~-l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+++|+-..+|.+..     -+..+++|. +++....       ..+...+|..++.+++--.|....=+..+.....|
T Consensus         2 ~~i~~GAEa~i~~~~~-----~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I   76 (204)
T COG3642           2 DLIKQGAEAIIYLTDF-----LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLI   76 (204)
T ss_pred             chhhCCcceeEEeeec-----cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEE
Confidence            3578899999998855     233444543 2221111       11345678999998876666666666778888999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +|||.++-.|.+.+...       +..++..+-.-+.-||.   .+|+|+||.++||++..+. +.++||||+..
T Consensus        77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99999999999888655       34566677777788995   4999999999999998875 99999999875

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.77  E-value=3.5e-09  Score=122.71  Aligned_cols=242  Identities=19%  Similarity=0.208  Sum_probs=163.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEee---ccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD---RVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.+-+|.++.++.+.-..   .+...++|...   .......+....+-.++-..+||-+++..--+.-.....||++|.
T Consensus       810 ~p~qS~sp~ss~p~~pa~---sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~  886 (1205)
T KOG0606|consen  810 KPSQSGSPSSSFPASPAG---SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYL  886 (1205)
T ss_pred             ccccCCCCcccccCCccc---cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHh
Confidence            467778888887654321   22222333222   222222334444444444455666665554455667889999999


Q ss_pred             CCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc--------
Q 045343          602 NNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT--------  673 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~--------  673 (813)
                      .+++|..-|+.....+....+..+..+...++|||.   ..+.|+|++|.|+++..+++.+++||+......        
T Consensus       887 ~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~  963 (1205)
T KOG0606|consen  887 NGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDL  963 (1205)
T ss_pred             ccCCchhhhhcCCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccccCcCCc
Confidence            999999999887777766677777788899999994   468999999999999999999999998432210        


Q ss_pred             -------------cCccc--------ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh
Q 045343          674 -------------LNQSK--------AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY  732 (813)
Q Consensus       674 -------------~~~~~--------~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~  732 (813)
                                   .....        .......+|+.|.+||.+.+......+|.|++|++++|.++|..||.....+..
T Consensus       964 sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~ 1043 (1205)
T KOG0606|consen  964 SGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQI 1043 (1205)
T ss_pred             ccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhh
Confidence                         00000        112235689999999999999999999999999999999999999986654322


Q ss_pred             hhhHHHHHHhhccCcccccccccccccc-cHHHHHHHHHHHHHhcccCCCCCCCHH
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALN-DIKCVEKLVMVSIWCIQEDPSLRPTMK  787 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~  787 (813)
                      .               +.+......... ..+...++.+++...+..+|.+|..|.
T Consensus      1044 f---------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1044 F---------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             h---------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            1               111111111111 123345566777778888999998776

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.64  E-value=1.4e-07  Score=89.12  Aligned_cols=140  Identities=22%  Similarity=0.298  Sum_probs=101.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEe-ecccc-------ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQ-------DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l-~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+.|-+|+-+.|+++..     .++...||.- .+...       -..++..+|.+.+.+++--.|.-..-++.+...-.
T Consensus        12 l~likQGAEArv~~~~~-----~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~   86 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSF-----SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQ   86 (229)
T ss_pred             ceeeeccceeeEeeecc-----CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCe
Confidence            35688999999999987     5666666642 21111       11245678999999887666655555667777788


Q ss_pred             EEEeecCC-CchhhhhhccC-CCCHHHH-HHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC---CEEEeeccCc
Q 045343          596 LVYEFLNN-GTLASFLFGNL-KPSWNLR-TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY---NARISDFGLA  669 (813)
Q Consensus       596 lV~e~~~~-gsL~~~l~~~~-~l~~~~~-~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~---~~kl~DfGla  669 (813)
                      |+|||.++ -++.+++.... ....... ..++..|-+.+.-||.   .+|+|+||..+||+|..++   .+.++|||++
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecch
Confidence            99999977 47888886542 2222233 6788889999999995   4999999999999996544   4689999998


Q ss_pred             cc
Q 045343          670 KL  671 (813)
Q Consensus       670 ~~  671 (813)
                      ..
T Consensus       164 ~~  165 (229)
T KOG3087|consen  164 SV  165 (229)
T ss_pred             hc
Confidence            65

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.56  E-value=1.6e-07  Score=84.93  Aligned_cols=76  Identities=26%  Similarity=0.434  Sum_probs=60.1

Q ss_pred             EEEeeCccEEEeCCC-CCEEeeeccCCC--ceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeecC
Q 045343          102 VKLTADHGLVLNDPQ-GKQVWSSEIDIG--TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRK  178 (813)
Q Consensus       102 l~~~~~g~l~l~~~~-~~~~wst~~~~~--~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~~  178 (813)
                      +.++.||+||+++.. +.+||++++...  ....+.|+++|||||++.++.++|+|=.   .                  
T Consensus        24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t---~------------------   82 (114)
T smart00108       24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNT---T------------------   82 (114)
T ss_pred             cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecc---c------------------
Confidence            455689999999765 589999998633  2368899999999999998899998711   1                  


Q ss_pred             CCCCCCCCceeEEeccCCcceecc
Q 045343          179 SETNFSRGRFQFRLLKDGNLVLNI  202 (813)
Q Consensus       179 s~~dps~G~~~~~~~~~g~~~~~~  202 (813)
                          ...|.|.+.|+++|+++++-
T Consensus        83 ----~~~~~~~~~L~ddGnlvl~~  102 (114)
T smart00108       83 ----GANGNYVLVLLDDGNLVIYD  102 (114)
T ss_pred             ----CCCCceEEEEeCCCCEEEEC
Confidence                13467889999999999874

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.56  E-value=3.2e-07  Score=95.75  Aligned_cols=129  Identities=15%  Similarity=0.081  Sum_probs=94.6

Q ss_pred             EEEEEEeccCCcceEEEEEEeecccc-----------ccchhhhheeeeeeccccCC--cceEEeEeec-----CCceEE
Q 045343          535 VYKGVILTTRTSTTAVAVKKLDRVFQ-----------DGEKEFKNEVVVIGQTHHKN--LVRLLGFCDE-----GQNRLL  596 (813)
Q Consensus       535 Vykg~~~~~~~~~~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~-----~~~~~l  596 (813)
                      |.+..+     +++.+.||+......           .....+.+|...+.++...+  .++++++.+.     ....+|
T Consensus        38 vvr~~~-----~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L  112 (268)
T PRK15123         38 TLRFEL-----AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI  112 (268)
T ss_pred             EEEEEE-----CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence            556655     566899997643211           01113778888888885444  4455666643     234689


Q ss_pred             EEeecCCC-chhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-------CCCEEEeec
Q 045343          597 VYEFLNNG-TLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-------YYNARISDF  666 (813)
Q Consensus       597 V~e~~~~g-sL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-------~~~~kl~Df  666 (813)
                      |+|++++- +|.+++..  ....+...+..++.+++..+.-||+.   +|+|+|++++|||++.       +..+.++||
T Consensus       113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl  189 (268)
T PRK15123        113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDL  189 (268)
T ss_pred             EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence            99999986 89998753  33445667788999999999999964   9999999999999975       468999999


Q ss_pred             cCccc
Q 045343          667 GLAKL  671 (813)
Q Consensus       667 Gla~~  671 (813)
                      +.+..
T Consensus       190 ~r~~~  194 (268)
T PRK15123        190 HRAQI  194 (268)
T ss_pred             Ccccc
Confidence            98753

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.55  E-value=1.7e-07  Score=85.07  Aligned_cols=86  Identities=27%  Similarity=0.426  Sum_probs=64.9

Q ss_pred             EEEee-CccEEEeCCC-CCEEeeeccCC--CceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343          102 VKLTA-DHGLVLNDPQ-GKQVWSSEIDI--GTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus       102 l~~~~-~g~l~l~~~~-~~~~wst~~~~--~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      +.++. ||+||+++.. +.+||++++..  .....+.|+++|||||++.++.++|||=-.                    
T Consensus        24 ~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~--------------------   83 (116)
T cd00028          24 LIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTT--------------------   83 (116)
T ss_pred             CCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEeccc--------------------
Confidence            34555 9999999765 58999999864  344689999999999999999999986421                    


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecc
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG  218 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  218 (813)
                           .+.+.+.+.|+++|+++++-...      ...|.+.
T Consensus        84 -----~~~~~~~~~L~ddGnlvl~~~~~------~~~W~Sf  113 (116)
T cd00028          84 -----RVNGNYVLVLLDDGNLVLYDSDG------NFLWQSF  113 (116)
T ss_pred             -----CCCCceEEEEeCCCCEEEECCCC------CEEEcCC
Confidence                 03567899999999999875431      3566653

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=98.50  E-value=1.3e-07  Score=78.59  Aligned_cols=49  Identities=16%  Similarity=0.281  Sum_probs=36.3

Q ss_pred             CChhhhHHhhcc---cCCeeeEEecC--ceeeeeccCC-CCCccccccccccccc
Q 045343          386 YNEVQCKNSCLS---DCFCAAVIFQD--DCCWFKKLPL-SNGMTDGRLTSKAFMK  434 (813)
Q Consensus       386 ~s~~~C~~~Cl~---nCsC~A~~~~~--~~C~~~~~~l-~~~~~~~~~~~~~~lk  434 (813)
                      +++++|+++|++   ||||+||+|.+  .+|++|...+ .+.+.......+.|+|
T Consensus        25 ~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~~~g~~Ly~r   79 (80)
T cd00129          25 NTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEFSHGFDLYEN   79 (80)
T ss_pred             cCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhccCCCceeEeE
Confidence            689999999999   99999999953  5799998777 6554433323344443

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.48  E-value=9e-07  Score=87.06  Aligned_cols=125  Identities=23%  Similarity=0.236  Sum_probs=79.6

Q ss_pred             EEEEEEeccCCcceEEEEEEeeccccc------------c--------------chhhhheeeeeeccccC--CcceEEe
Q 045343          535 VYKGVILTTRTSTTAVAVKKLDRVFQD------------G--------------EKEFKNEVVVIGQTHHK--NLVRLLG  586 (813)
Q Consensus       535 Vykg~~~~~~~~~~~vavK~l~~~~~~------------~--------------~~~~~~E~~~l~~l~h~--niv~l~g  586 (813)
                      ||.|...    ++..+|||..+.....            .              .....+|.+.|.++...  ++.++++
T Consensus         2 Vy~~~~~----~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~   77 (188)
T PF01163_consen    2 VYHAIDP----DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD   77 (188)
T ss_dssp             EEEEEEC----TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE
T ss_pred             EEEEECC----CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE
Confidence            7888764    6779999987532100            0              01245788888888755  5667775


Q ss_pred             EeecCCceEEEEeecC--CCchhhhhhccCCCCHHHHHHHHHHHHHHHHH-hhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          587 FCDEGQNRLLVYEFLN--NGTLASFLFGNLKPSWNLRTNIAFQIARGLLY-LHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       587 ~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~y-LH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      +.    ...|||||++  +..+..+....  ++......++.+++..+.. +|   ..+|+|+||.+.|||++++ .+.|
T Consensus        78 ~~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   78 YN----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             EE----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred             Ee----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence            53    4579999998  65554433222  1134456677778776665 45   4599999999999999988 9999


Q ss_pred             eeccCccccc
Q 045343          664 SDFGLAKLLT  673 (813)
Q Consensus       664 ~DfGla~~~~  673 (813)
                      +|||.+....
T Consensus       148 IDf~qav~~~  157 (188)
T PF01163_consen  148 IDFGQAVDSS  157 (188)
T ss_dssp             --GTTEEETT
T ss_pred             EecCcceecC
Confidence            9999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.44  E-value=3.6e-06  Score=89.04  Aligned_cols=257  Identities=14%  Similarity=0.115  Sum_probs=148.7

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEe----Ee---ecCCce
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLG----FC---DEGQNR  594 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g----~~---~~~~~~  594 (813)
                      .+..||+|+-+.+|-.-      +..-.+-|+.+........+...|   |... .||-+-.-+.    ..   ......
T Consensus        15 ~gr~LgqGgea~ly~l~------e~~d~VAKIYh~Pppa~~aqk~a~---la~~p~~p~~~~rvaWPqa~L~G~~~~~~i   85 (637)
T COG4248          15 PGRPLGQGGEADLYTLG------EVRDQVAKIYHAPPPAAQAQKVAE---LAATPDAPLLNYRVAWPQATLHGGRRGKVI   85 (637)
T ss_pred             CCccccCCccceeeecc------hhhchhheeecCCCchHHHHHHHH---hccCCCCcchhhhhcccHHHhhCCCcccee
Confidence            35789999999999642      222233455554433222222222   2222 3443222111    11   112225


Q ss_pred             EEEEeecCCC-chhhhhhc------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          595 LLVYEFLNNG-TLASFLFG------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       595 ~lV~e~~~~g-sL~~~l~~------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .+.|..+++. ...+++..      -...+|...++.+..+|.+.+-||+.   |.+-+|++++|+|+++++.+.|.|-.
T Consensus        86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248          86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence            6677776654 23333321      23468999999999999999999965   88999999999999999999999855


Q ss_pred             CccccccCcccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhC-CcCCCcccc--hhhh----hh
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISC-RKSFDIEMG--EEYA----IL  735 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG-~~p~~~~~~--~~~~----~l  735 (813)
                      .-....++   ......+|...|.+||.-.     +..-+...|-|.||++++++|.| ++||.+-..  ....    .+
T Consensus       163 sfqi~~ng---~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I  239 (637)
T COG4248         163 SFQINANG---TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI  239 (637)
T ss_pred             ceeeccCC---ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh
Confidence            43332221   1133456899999999754     33456789999999999999886 999975321  1000    11


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHhcC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED--PSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~d--P~~RPt~~evl~~L~~~  796 (813)
                      ....+..-.+ .-.....+.... .-.-....+..+..+|+...  +.-|||++-.+..|..+
T Consensus       240 a~g~f~ya~~-~~~g~~p~P~~~-P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         240 AHGRFAYASD-QRRGLKPPPRSI-PLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             hcceeeechh-ccCCCCCCCCCC-ChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence            0000000000 000011110000 01112344555666777543  66899999988888654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.38  E-value=2e-06  Score=86.80  Aligned_cols=107  Identities=20%  Similarity=0.204  Sum_probs=86.4

Q ss_pred             chhhhheeeeeecccc--CCcceEEeEeecCC----ceEEEEeecCC-CchhhhhhccCCCCHHHHHHHHHHHHHHHHHh
Q 045343          563 EKEFKNEVVVIGQTHH--KNLVRLLGFCDEGQ----NRLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYL  635 (813)
Q Consensus       563 ~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~----~~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yL  635 (813)
                      .....+|...+.++..  -...+.+++.+...    ..+||+|++++ .+|.+++......+......++.++++.++-|
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence            3457788888888854  44567777776533    35899999998 48999998755567778889999999999999


Q ss_pred             hhcCCCCeeeCCCCCCcEEEcCCC---CEEEeeccCcccc
Q 045343          636 HEDCSAQIIHCDIKPQNILLDDYY---NARISDFGLAKLL  672 (813)
Q Consensus       636 H~~~~~~ivH~dlk~~NIll~~~~---~~kl~DfGla~~~  672 (813)
                      |+.   +|+|+|+++.|||++.+.   .+.++||+-++..
T Consensus       135 H~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  135 HDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            965   999999999999999887   8999999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.37  E-value=2.9e-06  Score=83.96  Aligned_cols=136  Identities=17%  Similarity=0.123  Sum_probs=102.6

Q ss_pred             cceeeeeeEEEEEEeccCCcceEEEEEEeeccc------cccchhhhheeeeeeccccC--CcceEEeEee-cC----Cc
Q 045343          527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF------QDGEKEFKNEVVVIGQTHHK--NLVRLLGFCD-EG----QN  593 (813)
Q Consensus       527 LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~-~~----~~  593 (813)
                      -|+||.+.|++-.+     ++..+-+|+-+...      +.+...|.+|...|.++...  .+.+++ ++. ..    ..
T Consensus        26 ~~rgG~SgV~r~~~-----~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~r   99 (216)
T PRK09902         26 YRRNGMSGVQCVER-----NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWR   99 (216)
T ss_pred             cCCCCcceEEEEEe-----CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceE
Confidence            36799999999776     44468888875211      23566799999999999643  344555 332 21    23


Q ss_pred             eEEEEeecCC-Cchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC--EEEeeccC
Q 045343          594 RLLVYEFLNN-GTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN--ARISDFGL  668 (813)
Q Consensus       594 ~~lV~e~~~~-gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~--~kl~DfGl  668 (813)
                      ..||+|-+++ -+|.+++...  .+.+...+..++.+|++.+.-||+   .++.|+|+.+.|||++.++.  ++++||.-
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk  176 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEK  176 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence            6899997765 5899988653  355777888999999999999995   49999999999999986666  99999977


Q ss_pred             ccc
Q 045343          669 AKL  671 (813)
Q Consensus       669 a~~  671 (813)
                      ++.
T Consensus       177 ~r~  179 (216)
T PRK09902        177 SRR  179 (216)
T ss_pred             cch
Confidence            654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=1.7e-07  Score=105.19  Aligned_cols=152  Identities=20%  Similarity=0.283  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc-------eeecccccccccCccccc
Q 045343          625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-------IRTAIRGTKGYVAPEWFR  697 (813)
Q Consensus       625 ~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-------~~~~~~gt~~y~aPE~l~  697 (813)
                      +.+++.|+.|+|.  +.++||++|.|++|.++.++..||+.|+............       ......-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3455699999997  6799999999999999999999999999876544311110       011122456799999999


Q ss_pred             CCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhc
Q 045343          698 NSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCI  776 (813)
Q Consensus       698 ~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl  776 (813)
                      +...+.++|+||+|+++|-+.. |+.-+............             ...+..-......+.+.++.+=+.+++
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-------------~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-------------RNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-------------hcccccccccccccCcHHHHHHHHHHh
Confidence            9888999999999999999984 55545443221111110             000000000111244677778788889


Q ss_pred             ccCCCCCCCHHHHHH
Q 045343          777 QEDPSLRPTMKKVLQ  791 (813)
Q Consensus       777 ~~dP~~RPt~~evl~  791 (813)
                      ..++..||++.++..
T Consensus       250 ~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLS  264 (700)
T ss_pred             cCCcccCcchhhhhc
Confidence            999999998877653

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.18  E-value=5.4e-06  Score=83.83  Aligned_cols=136  Identities=16%  Similarity=0.158  Sum_probs=93.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc----------------------cchhhhheeeeeecccc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD----------------------GEKEFKNEVVVIGQTHH  578 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~E~~~l~~l~h  578 (813)
                      +.+.++||-|--+.||.|...    .+..+|||.-+.....                      .....++|.+.|.+|..
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~----~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~  168 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP----KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP  168 (304)
T ss_pred             HhhccccccCccceEEEEECC----CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh
Confidence            456789999999999999875    6788999965321100                      01234678888888865


Q ss_pred             C--CcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          579 K--NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       579 ~--niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      .  .+.+.+++    +...+||||.++-.|...--     +.+....++..|++-+..+-+   .||||+|+.+-||+++
T Consensus       169 ~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~-----~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~  236 (304)
T COG0478         169 EGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL-----DVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVT  236 (304)
T ss_pred             cCCCCCCcccc----ccceeeeehcccceeecccC-----cccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEe
Confidence            4  66666654    45689999999977654321     222233333334443333332   4899999999999999


Q ss_pred             CCCCEEEeeccCcccc
Q 045343          657 DYYNARISDFGLAKLL  672 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~  672 (813)
                      ++|.+.++||--+...
T Consensus       237 ~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         237 EDGDIVVIDWPQAVPI  252 (304)
T ss_pred             cCCCEEEEeCcccccC
Confidence            9999999999776543

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.12  E-value=3.2e-05  Score=69.67  Aligned_cols=100  Identities=27%  Similarity=0.436  Sum_probs=67.4

Q ss_pred             eeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEeCCCCCEEeee
Q 045343           44 TWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSS  123 (813)
Q Consensus        44 ~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~~~~~~~~wst  123 (813)
                      ++.+.+|.+.|-|...|         -|-| |.  ...+++|..+...  ........+.|..||||||+|..+++||++
T Consensus        13 p~~~~s~~~~L~l~~dG---------nLvl-~~--~~~~~iWss~~t~--~~~~~~~~~~L~~~GNlvl~d~~~~~lW~S   78 (114)
T PF01453_consen   13 PLTSSSGNYTLILQSDG---------NLVL-YD--SNGSVIWSSNNTS--GRGNSGCYLVLQDDGNLVLYDSSGNVLWQS   78 (114)
T ss_dssp             EEEECETTEEEEEETTS---------EEEE-EE--TTTEEEEE--S-T--TSS-SSEEEEEETTSEEEEEETTSEEEEES
T ss_pred             ccccccccccceECCCC---------eEEE-Ec--CCCCEEEEecccC--CccccCeEEEEeCCCCEEEEeecceEEEee
Confidence            56565589999997655         3555 33  2357799883320  111157889999999999999999999999


Q ss_pred             ccCCCceeEEEEec--CcCEEEEecCCcccccccccCc
Q 045343          124 EIDIGTVAVGHMND--TGNFVLASSSSSKLWDSFSNPS  159 (813)
Q Consensus       124 ~~~~~~~~~~~l~d--~Gnlvl~~~~~~~~WqSFD~PT  159 (813)
                      . ...+.+.+..++  +||++ +.....+.|.|=+.|.
T Consensus        79 f-~~ptdt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   79 F-DYPTDTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             T-TSSS-EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred             c-CCCccEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence            4 335566777887  89998 7767788998877663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.01  E-value=1.5e-05  Score=90.22  Aligned_cols=145  Identities=19%  Similarity=0.191  Sum_probs=90.3

Q ss_pred             hcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc--------------------------c--------h--
Q 045343          522 NFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--------------------------E--------K--  564 (813)
Q Consensus       522 ~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~--------------------------~--------~--  564 (813)
                      +|. +.|+.++-|.||+|++.    +|+.||||+.+-.-.+.                          .        +  
T Consensus       127 eF~~~PiAsASIaQVH~A~L~----sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l  202 (517)
T COG0661         127 EFEPEPIASASIAQVHRAVLK----SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL  202 (517)
T ss_pred             HcCCCchhhhhHhhheeEEec----CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence            344 46999999999999996    58899999975211100                          0        0  


Q ss_pred             ----hhhheeeeeecc----ccCCcceEEeEee-cCCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHH
Q 045343          565 ----EFKNEVVVIGQT----HHKNLVRLLGFCD-EGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLY  634 (813)
Q Consensus       565 ----~~~~E~~~l~~l----~h~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~y  634 (813)
                          ++..|..-+.++    ++..-+++=..+. -.....|+|||++|-.+.++..- ....+.+.......++.--..+
T Consensus       203 ~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~  282 (517)
T COG0661         203 REELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL  282 (517)
T ss_pred             HHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                122333333333    1222223333332 34577999999999999888522 2334433322222221111112


Q ss_pred             hhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       635 LH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      -|     ++.|.|.+|.||+++.++.+.+.|||+...+...
T Consensus       283 ~d-----gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         283 RD-----GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             hc-----CccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            23     8999999999999999999999999998877543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.91  E-value=2.5e-05  Score=77.18  Aligned_cols=103  Identities=25%  Similarity=0.403  Sum_probs=83.1

Q ss_pred             hheeeeeecccc-CCcceEEeEeecCCceEEEEeecCCCchhhh---hhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045343          567 KNEVVVIGQTHH-KNLVRLLGFCDEGQNRLLVYEFLNNGTLASF---LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ  642 (813)
Q Consensus       567 ~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~---l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~  642 (813)
                      ..|..+++.+++ +++++++|+|    ..++|.||...+++...   +.+-...+|..|.+|+.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            346677777776 6999999999    34789999998766432   222235689999999999999999999865556


Q ss_pred             eeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          643 IIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       643 ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      +...|++++|+-+++++++|+.|...+....
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            8889999999999999999999998776543

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.81  E-value=8.8e-05  Score=83.71  Aligned_cols=159  Identities=19%  Similarity=0.210  Sum_probs=96.9

Q ss_pred             CCCCCCHHHHHHHHh------------hcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-----------
Q 045343          507 NLPCFSYKELEEATD------------NFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-----------  562 (813)
Q Consensus       507 ~~~~~~~~el~~~~~------------~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-----------  562 (813)
                      ..|.++++|+.+.-.            +|. +.||.-+.|.||+|.+.    +++.||||+-+..-++.           
T Consensus       136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~----~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~  211 (538)
T KOG1235|consen  136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLK----NGEDVAVKVQHPGLEKLIMLDLRNLRLL  211 (538)
T ss_pred             cCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEec----CCCEEEEEecCcChHHHHHHHHHHHHHH
Confidence            467777777655332            244 46999999999999996    58899999875321110           


Q ss_pred             --------------------ch------hhhheeeeeec----cccCCc---ceEEeEee-cCCceEEEEeecCCCchhh
Q 045343          563 --------------------EK------EFKNEVVVIGQ----THHKNL---VRLLGFCD-EGQNRLLVYEFLNNGTLAS  608 (813)
Q Consensus       563 --------------------~~------~~~~E~~~l~~----l~h~ni---v~l~g~~~-~~~~~~lV~e~~~~gsL~~  608 (813)
                                          .+      +|..|.+-..+    ++|-++   |.+=.++. -...+.|+||||+|..+.|
T Consensus       212 ~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~D  291 (538)
T KOG1235|consen  212 AKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKIND  291 (538)
T ss_pred             HHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCC
Confidence                                01      12233332222    234441   11222222 2347899999999998877


Q ss_pred             hhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc----CCCCEEEeeccCcccccc
Q 045343          609 FLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD----DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       609 ~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~----~~~~~kl~DfGla~~~~~  674 (813)
                      ...- ....+...+.   ..+.++  |++.-...|++|+|=+|.||+++    .++.+.+.|||+...+..
T Consensus       292 l~~i~~~gi~~~~i~---~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  292 LDAIDKRGISPHDIL---NKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHHHHHcCCCHHHHH---HHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            6432 2233333333   222222  22222234899999999999998    367899999999876653

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.75  E-value=0.00015  Score=74.17  Aligned_cols=137  Identities=14%  Similarity=0.174  Sum_probs=84.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      ++||+|..+.||+.       .+...++|.....  .......+|.++++.+..-.  +.+.+++....+...+|||+++
T Consensus         7 ~~i~~G~t~~~y~~-------~~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH-------KTGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe-------cCCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence            57899999999983       1224567776532  23345788999999886544  4678888877777889999999


Q ss_pred             CCc-hhhhh---------------------hcc--CCCCHHHHH-HHHH----------HHHH-HHHHhhhc-CCCCeee
Q 045343          603 NGT-LASFL---------------------FGN--LKPSWNLRT-NIAF----------QIAR-GLLYLHED-CSAQIIH  645 (813)
Q Consensus       603 ~gs-L~~~l---------------------~~~--~~l~~~~~~-~i~~----------~ia~-gl~yLH~~-~~~~ivH  645 (813)
                      |.. +...+                     +.-  ......... ++..          .+.+ ...+|... ....++|
T Consensus        78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H  157 (226)
T TIGR02172        78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH  157 (226)
T ss_pred             CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence            863 21111                     110  011111000 0000          0111 11222211 1345789


Q ss_pred             CCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          646 CDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       646 ~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +|+.|.||++++++ +.|+||+.+..
T Consensus       158 gD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       158 GDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             cCCCCCcEEEcCCC-cEEEechhcCc
Confidence            99999999999888 99999998754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=97.68  E-value=8.3e-05  Score=61.92  Aligned_cols=56  Identities=18%  Similarity=0.344  Sum_probs=38.9

Q ss_pred             eeeeeecccCCCCCccccccCChhhhHHhhcc-cCCeeeEEec--Cceeeeec-cCCCCC
Q 045343          366 DFHELQLTNWHLSDSERFRPYNEVQCKNSCLS-DCFCAAVIFQ--DDCCWFKK-LPLSNG  421 (813)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~-nCsC~A~~~~--~~~C~~~~-~~l~~~  421 (813)
                      .|..++...++..........++++|++.|+. +|+|.||.|.  ++.|+++. ..+.+.
T Consensus         5 ~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~   64 (78)
T smart00473        5 CFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDA   64 (78)
T ss_pred             eeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccc
Confidence            34555555554332222356799999999999 9999999997  46799987 444433

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.65  E-value=0.00013  Score=72.51  Aligned_cols=138  Identities=14%  Similarity=0.116  Sum_probs=83.0

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhh---------hheeeeeeccccC---CcceE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF---------KNEVVVIGQTHHK---NLVRL  584 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~---------~~E~~~l~~l~h~---niv~l  584 (813)
                      ....+...+.+-......|.+-..     ++...++|..+......++.|         .+++..+.+++..   .+..+
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei-----~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~  103 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI-----DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP  103 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE-----CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence            333344445555555666666555     566778887654222112222         2333333333322   22232


Q ss_pred             EeEee-----cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC
Q 045343          585 LGFCD-----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY  659 (813)
Q Consensus       585 ~g~~~-----~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~  659 (813)
                      +.+.+     -....+|+|||++|..|.+...    ++.    .++..+++++.-||+.   |++|+|.+|.|++++++ 
T Consensus       104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~-  171 (229)
T PF06176_consen  104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN-  171 (229)
T ss_pred             eeeeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-
Confidence            22221     2234579999999988876642    111    2456677888999965   99999999999999965 


Q ss_pred             CEEEeeccCccc
Q 045343          660 NARISDFGLAKL  671 (813)
Q Consensus       660 ~~kl~DfGla~~  671 (813)
                      .+++.||+..+.
T Consensus       172 ~i~iID~~~k~~  183 (229)
T PF06176_consen  172 GIRIIDTQGKRM  183 (229)
T ss_pred             cEEEEECccccc
Confidence            499999987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.59  E-value=0.00034  Score=72.63  Aligned_cols=137  Identities=13%  Similarity=0.042  Sum_probs=82.9

Q ss_pred             cceeee-eeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEeecCCC
Q 045343          527 VGRGSF-GIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       527 LG~G~f-G~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      |-.|.. ..||+...     .+..+.||......   ..++..|++++..+. +--+.+++++.......++|||+++|.
T Consensus         6 ~~~g~~~~~v~~~~~-----~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   77 (244)
T cd05150           6 VTEGQSGATVYRLDG-----KNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV   77 (244)
T ss_pred             cCCCCCcCeEEEEcC-----CCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence            444444 78898754     22467778765432   345678888888874 444667888777666789999999998


Q ss_pred             chhhhh-------------------hccC----CCC--HHHHHHH-HH-------------------HHHHHHHHhhhc-
Q 045343          605 TLASFL-------------------FGNL----KPS--WNLRTNI-AF-------------------QIARGLLYLHED-  638 (813)
Q Consensus       605 sL~~~l-------------------~~~~----~l~--~~~~~~i-~~-------------------~ia~gl~yLH~~-  638 (813)
                      +|....                   +...    ...  ....... ..                   .+.+.+..|-.. 
T Consensus        78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (244)
T cd05150          78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR  157 (244)
T ss_pred             cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence            776432                   1100    000  0000000 00                   011112222111 


Q ss_pred             ---CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 ---CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 ---~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                         ....++|+|+.|.|||++++....|+||+.+..
T Consensus       158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence               135689999999999999987789999988754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.58  E-value=0.00021  Score=73.36  Aligned_cols=140  Identities=21%  Similarity=0.182  Sum_probs=82.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEeecC---CceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFCDEG---QNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~---~~~~lV~e  599 (813)
                      +.|+.|..+.||+....     +..+++|.....  .....+..|..+++.+....  +.+++.++...   ...+++|+
T Consensus         3 ~~l~~G~~n~~~~v~~~-----~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTD-----DGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEESSSSEEEEEEET-----TSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEEC-----CcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence            57889999999998763     257899986543  34456788888888886443  56777654322   23689999


Q ss_pred             ecCCCchhh----------------hh---hcc----CCCCHHH---------HHHH------------HHHHHH-HHHH
Q 045343          600 FLNNGTLAS----------------FL---FGN----LKPSWNL---------RTNI------------AFQIAR-GLLY  634 (813)
Q Consensus       600 ~~~~gsL~~----------------~l---~~~----~~l~~~~---------~~~i------------~~~ia~-gl~y  634 (813)
                      ++++..+..                .+   +..    ..+.+..         ....            ...+.+ .+..
T Consensus        76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (239)
T PF01636_consen   76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE  155 (239)
T ss_dssp             EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence            999988777                11   111    0011100         0000            112222 3333


Q ss_pred             hhh----cCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCccc
Q 045343          635 LHE----DCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKL  671 (813)
Q Consensus       635 LH~----~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~  671 (813)
                      +++    .....++|+|+.+.|||++ +++.+.|+||+.+..
T Consensus       156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            332    1356799999999999999 666668999988754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.46  E-value=1.6e-05  Score=88.63  Aligned_cols=182  Identities=17%  Similarity=0.143  Sum_probs=127.3

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC-cceEEeEeecCCceEEEEeecC
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN-LVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      -+.+++++.++++|..-.    ..+...++.+..     .....-++++|.+++||| .+..++-+..+...+++++++.
T Consensus       247 fh~fvK~altknpKkRpt----aeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  247 FHNFVKGALTKNPKKRPT----AEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS  317 (829)
T ss_pred             HHHHHHHHhcCCCccCCC----hhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence            355678899999986532    223333555432     244566788999999999 6777777777778899999988


Q ss_pred             CC-c-hhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          603 NG-T-LASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       603 ~g-s-L~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      .+ + .....-....+...+...+...-++++++||..   .=+|+|    ||+..+ ...|..||+.+..+.....   
T Consensus       318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~---  386 (829)
T KOG0576|consen  318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMK---  386 (829)
T ss_pred             CCccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCcccc---
Confidence            77 2 221111112233334445566677899999943   347888    776665 6889999999887765431   


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCC
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD  725 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~  725 (813)
                      .....+++.++|||......+..+.|+|++|+-..++--|.+|-.
T Consensus       387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            345668999999999999999999999999987777766766653

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.45  E-value=0.00062  Score=68.54  Aligned_cols=137  Identities=20%  Similarity=0.196  Sum_probs=87.1

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccc---------hhh---------------hheeeeeeccc--cC
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---------KEF---------------KNEVVVIGQTH--HK  579 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~---------~~~---------------~~E~~~l~~l~--h~  579 (813)
                      .|..|--..||+|..    .++..+|||+.+.......         ..|               ..|..-|.++.  +-
T Consensus        55 ~istGKEA~Vy~a~~----~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV  130 (268)
T COG1718          55 CISTGKEANVYLAET----GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV  130 (268)
T ss_pred             eecCCcceEEEeecc----CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            567788889999875    3678999999875322111         111               22333444442  33


Q ss_pred             CcceEEeEeecCCceEEEEeecCCCchhh-hhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC
Q 045343          580 NLVRLLGFCDEGQNRLLVYEFLNNGTLAS-FLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY  658 (813)
Q Consensus       580 niv~l~g~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~  658 (813)
                      .+.+.+++.    +-.|||||+....+-. .|.. ..+.......+..++++.+.-|-.  ..++||+||..-|||+. +
T Consensus       131 rvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~  202 (268)
T COG1718         131 RVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-D  202 (268)
T ss_pred             CCCCceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-C
Confidence            344444443    3479999987642111 1111 122222566677777777777764  25899999999999999 8


Q ss_pred             CCEEEeeccCcccccc
Q 045343          659 YNARISDFGLAKLLTL  674 (813)
Q Consensus       659 ~~~kl~DfGla~~~~~  674 (813)
                      +.+.|+|++-|....+
T Consensus       203 ~~p~iID~~QaV~~~h  218 (268)
T COG1718         203 GEPYIIDVSQAVTIDH  218 (268)
T ss_pred             CeEEEEECccccccCC
Confidence            8999999999986653

>PLN02876 acyl-CoA dehydrogenase

Probab=97.25  E-value=0.0017  Score=79.57  Aligned_cols=149  Identities=15%  Similarity=0.219  Sum_probs=90.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccc-cCCc--ceEEeEeecC---CceEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTH-HKNL--VRLLGFCDEG---QNRLL  596 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~g~~~~~---~~~~l  596 (813)
                      .+.|+.|.+..+|+.....+. ....+++|+..... ......+.+|.++++.+. |.++  .+++.+|.+.   ...++
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~-~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGG-SVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCC-cceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            367899999999997654221 11356667653321 122346889999999995 6665  7888888764   35789


Q ss_pred             EEeecCCCchhhh-----------------------hhccC-----------CCCH--HHHHHHH---------------
Q 045343          597 VYEFLNNGTLASF-----------------------LFGNL-----------KPSW--NLRTNIA---------------  625 (813)
Q Consensus       597 V~e~~~~gsL~~~-----------------------l~~~~-----------~l~~--~~~~~i~---------------  625 (813)
                      ||||+++..+.+.                       |+.-.           ...+  ..+..+.               
T Consensus       122 VME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~  201 (822)
T PLN02876        122 IMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRN  201 (822)
T ss_pred             EEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCC
Confidence            9999988653221                       11100           0001  0111111               


Q ss_pred             HHHHHHHHHhhhcCC--------CCeeeCCCCCCcEEEcCC-CC-EEEeeccCccccc
Q 045343          626 FQIARGLLYLHEDCS--------AQIIHCDIKPQNILLDDY-YN-ARISDFGLAKLLT  673 (813)
Q Consensus       626 ~~ia~gl~yLH~~~~--------~~ivH~dlk~~NIll~~~-~~-~kl~DfGla~~~~  673 (813)
                      ..+.+.+.+|..+..        ..++|+|+++.||+++.+ .. .-|.||+++..-+
T Consensus       202 ~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd  259 (822)
T PLN02876        202 PKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN  259 (822)
T ss_pred             hhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence            123344566744321        359999999999999853 33 5799999886543

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.24  E-value=0.0015  Score=64.45  Aligned_cols=135  Identities=26%  Similarity=0.331  Sum_probs=93.2

Q ss_pred             cCCCCCCHHHHHHHHhhcccccceeee-eeEEEEEEeccCCcceEEEEEEeeccc-----------c----------ccc
Q 045343          506 TNLPCFSYKELEEATDNFKEEVGRGSF-GIVYKGVILTTRTSTTAVAVKKLDRVF-----------Q----------DGE  563 (813)
Q Consensus       506 ~~~~~~~~~el~~~~~~~~~~LG~G~f-G~Vykg~~~~~~~~~~~vavK~l~~~~-----------~----------~~~  563 (813)
                      ..+..|+...   +..+|.+.||.|.- |.|||+.+     .+..+|+|..+...           .          ...
T Consensus        27 PKL~~F~~h~---~~I~flefLg~g~~~~~V~kv~I-----~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~   98 (207)
T PF13095_consen   27 PKLEPFTHHG---DDIEFLEFLGHGSHDGYVFKVEI-----DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYA   98 (207)
T ss_pred             CCcCCcCCCC---CcEeeeeecCCCCceeEEEEEEE-----CCeEEEEEEeeccccCCCccccccccccccccchhhhhc
Confidence            3455676622   67788999999999 99999998     67799999943210           0          011


Q ss_pred             hhhhheeeeeeccc---cCCc--ceEEeEeecC------------------CceEEEEeecCCCchhhhhhccCCCCHHH
Q 045343          564 KEFKNEVVVIGQTH---HKNL--VRLLGFCDEG------------------QNRLLVYEFLNNGTLASFLFGNLKPSWNL  620 (813)
Q Consensus       564 ~~~~~E~~~l~~l~---h~ni--v~l~g~~~~~------------------~~~~lV~e~~~~gsL~~~l~~~~~l~~~~  620 (813)
                      .-|..|.+...+|+   +.++  |+.+||..-.                  ..+.||.||++...         .    .
T Consensus        99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~----~  165 (207)
T PF13095_consen   99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------P----L  165 (207)
T ss_pred             ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------c----c
Confidence            23778888888885   4466  8888887211                  12357777765533         1    1


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       621 ~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      ..+-+.+|.+-|..+|   ..+|+-+|+++.|..     .-||+|||.+
T Consensus       166 ~~~~~~~~~~dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  166 QIRDIPQMLRDLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             chhHHHHHHHHHHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence            2233456667777888   459999999999986     5689999864

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.17  E-value=0.0013  Score=62.73  Aligned_cols=129  Identities=17%  Similarity=0.295  Sum_probs=86.9

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcce-EEeEeecCCceEEEEee
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR-LLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~g~~~~~~~~~lV~e~  600 (813)
                      +..+.|++|++|.||+|..     .+..+|+|+-+..  .....+..|.++|..++-.++-+ ++.|-.+    .+.|||
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-----~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~   93 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-----RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEY   93 (201)
T ss_pred             hhhhhhhcccccEEEEeec-----cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhh
Confidence            3457899999999999987     4568999986543  33567889999999998777654 4444322    344999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCC-CCcEEEcCCCCEEEeeccCccc
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIK-PQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk-~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ..|-.|.+.-...   +-    +-+..+++.---|-   ..+|-|+.|. |..++|..+..+.|+||.-|..
T Consensus        94 i~G~~L~~~~~~~---~r----k~l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          94 IDGRPLGKLEIGG---DR----KHLLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hcCcchhhhhhcc---cH----HHHHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            9998887654322   11    22333444422233   4588888885 5555555555999999999874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.12  E-value=0.0007  Score=80.93  Aligned_cols=195  Identities=20%  Similarity=0.164  Sum_probs=134.1

Q ss_pred             hheeeeeeccccCCcceEEeEeecCCceE----EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045343          567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRL----LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ  642 (813)
Q Consensus       567 ~~E~~~l~~l~h~niv~l~g~~~~~~~~~----lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~  642 (813)
                      ..|+..+.+..|+|++.+++|-.+.....    +..|++..-++...+++-...+..+.+.+..++.+||.|+|..   .
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~---~  306 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL---S  306 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh---c
Confidence            44667777889999999999986655433    4456788888888888888889999999999999999999964   3


Q ss_pred             eeeCCCCCC---cEEEcCCCCEEEe--eccCccccccCcccceeecccccccccCcccccCCCCCC--ccchhhHHHHHH
Q 045343          643 IIHCDIKPQ---NILLDDYYNARIS--DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA--KVDVYSFGVLLL  715 (813)
Q Consensus       643 ivH~dlk~~---NIll~~~~~~kl~--DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~--k~DVwS~Gvvl~  715 (813)
                      ..|.-|..+   +...+..+...++  ||+.++.+......   ....-+..+.++|.........  ..|+|.+|..+.
T Consensus       307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~  383 (1351)
T KOG1035|consen  307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL  383 (1351)
T ss_pred             cceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence            333333333   4444556667777  88888766543221   1122355677888876665544  479999999999


Q ss_pred             HHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          716 EIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       716 elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      .+..|..+-.....                  ...+.+.        .....+.+....|+..++++|+...+++.+.
T Consensus       384 ~~~~~~~i~~~~~~------------------~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  384 QLSQGEDISEKSAV------------------PVSLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhcCcccccccc------------------hhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence            99887654321110                  0011110        0011456777889999999999999999775

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.10  E-value=0.0032  Score=62.62  Aligned_cols=127  Identities=17%  Similarity=0.202  Sum_probs=85.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----------------cccchhhhheeeeeeccc------cCCcc
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----------------QDGEKEFKNEVVVIGQTH------HKNLV  582 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv  582 (813)
                      ..||+|+.=.||.--      +.....||+.....                ....++..+|+.-..++.      +.+|.
T Consensus         7 ~~i~~G~~R~cy~HP------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~   80 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP   80 (199)
T ss_pred             cccccCCCceEEECC------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence            569999999999632      34456777775443                122355666665555544      88899


Q ss_pred             eEEeEeecCCceEEEEeecCC------CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          583 RLLGFCDEGQNRLLVYEFLNN------GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       583 ~l~g~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      +++|+.+++....+|+|.+.+      -+|.+++.... ++. ...+.+.+   -..||-+   ..|+.+|++|.||++.
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~-~~~~~L~~---f~~~l~~---~~Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-LTE-ELRQALDE---FKRYLLD---HHIVIRDLNPHNIVVQ  152 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-ccH-HHHHHHHH---HHHHHHH---cCCeecCCCcccEEEE
Confidence            999999999999999998754      25777774443 344 33333333   3445553   3799999999999996


Q ss_pred             CC---C-CEEEee
Q 045343          657 DY---Y-NARISD  665 (813)
Q Consensus       657 ~~---~-~~kl~D  665 (813)
                      ..   . .+.|+|
T Consensus       153 ~~~~~~~~lvlID  165 (199)
T PF10707_consen  153 RRDSGEFRLVLID  165 (199)
T ss_pred             ecCCCceEEEEEe
Confidence            32   2 577777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK10593 hypothetical protein; Provisional

Probab=97.08  E-value=0.0049  Score=65.87  Aligned_cols=76  Identities=8%  Similarity=0.006  Sum_probs=53.9

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc---CCcceEEeEeecC---CceEEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH---KNLVRLLGFCDEG---QNRLLV  597 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~---~~~~lV  597 (813)
                      .+.||.|..+.||+....    ++ .+.+|..+.  ......+..|.+.|+.+..   ..+.+++++|..+   ...+||
T Consensus        19 ~~~i~~G~~~~vy~~~~~----~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         19 VECISEQPYAALWALYDS----QG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             eeecCCccceeEEEEEcC----CC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence            357999999999997542    23 355666432  1123478889999988853   4688999888543   568999


Q ss_pred             EeecCCCch
Q 045343          598 YEFLNNGTL  606 (813)
Q Consensus       598 ~e~~~~gsL  606 (813)
                      ||++++.++
T Consensus        92 mE~i~G~~~  100 (297)
T PRK10593         92 LERLRGVSV  100 (297)
T ss_pred             EeccCCEec
Confidence            999998765

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.07  E-value=0.002  Score=66.47  Aligned_cols=137  Identities=20%  Similarity=0.198  Sum_probs=75.4

Q ss_pred             cccceeeee-eEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccC---CcceEEeEeecCC---ceEEE
Q 045343          525 EEVGRGSFG-IVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK---NLVRLLGFCDEGQ---NRLLV  597 (813)
Q Consensus       525 ~~LG~G~fG-~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~---~~~lV  597 (813)
                      +.|+.|+.. .||+..        ..+++|..+.  ......+..|.+++..+...   -+.++++.....+   ..+++
T Consensus         3 ~~~~~gG~~n~vy~~~--------~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l   72 (235)
T cd05155           3 EPVDSGGTDNATFRLG--------DDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV   72 (235)
T ss_pred             eeccCCCcccceEEcC--------CceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence            457766666 588741        1356666443  12344688899888887532   3445555443322   34889


Q ss_pred             EeecCCCchhhhh------------------hccC--C--C-------------CHHHHH--HHH-------HHHHHH-H
Q 045343          598 YEFLNNGTLASFL------------------FGNL--K--P-------------SWNLRT--NIA-------FQIARG-L  632 (813)
Q Consensus       598 ~e~~~~gsL~~~l------------------~~~~--~--l-------------~~~~~~--~i~-------~~ia~g-l  632 (813)
                      |++++|.++.+..                  +.-.  .  .             .|....  .+.       .+.+.. +
T Consensus        73 ~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  152 (235)
T cd05155          73 YRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALW  152 (235)
T ss_pred             EEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHH
Confidence            9999987764321                  1100  0  0             011110  000       011111 1


Q ss_pred             HH-hhh--cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          633 LY-LHE--DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       633 ~y-LH~--~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .. ++.  .....++|+|+.+.||+++++...-|+||+.+..
T Consensus       153 ~~~~~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         153 EAALRAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             HHHhcccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            11 111  1244589999999999999776667999998754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.98  E-value=0.0011  Score=54.50  Aligned_cols=44  Identities=20%  Similarity=0.437  Sum_probs=32.8

Q ss_pred             ccCCCCCccccccCChhhhHHhhcccCCeeeEEecC--ceeeeecc
Q 045343          373 TNWHLSDSERFRPYNEVQCKNSCLSDCFCAAVIFQD--DCCWFKKL  416 (813)
Q Consensus       373 ~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~A~~~~~--~~C~~~~~  416 (813)
                      +++...+.......+.++|++.|+.||+|.||.|..  +.|+++..
T Consensus        12 ~~~~g~d~~~~~~~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~   57 (73)
T cd01100          12 VDFRGGDLSTVFASSAEQCQAACTADPGCLAFTYNTKSKKCFLKSS   57 (73)
T ss_pred             CccccCCcceeecCCHHHHHHHcCCCCCceEEEEECCCCeEEcccC
Confidence            344444443334568999999999999999999964  56999865

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.86  E-value=0.0045  Score=64.78  Aligned_cols=136  Identities=12%  Similarity=0.076  Sum_probs=77.2

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEeecCCC
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      .+..|-...+|+...     ++..+++|........-.-...+|..+++.+....+ .++++.+.    ..+|+||++|.
T Consensus         3 ~~~~G~tn~~y~~~~-----~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~   73 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-----PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGE   73 (256)
T ss_pred             cCCCcCcCCeEEEEe-----CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCc
Confidence            355677788998763     445677886543221111245778888888865444 34554432    36899999987


Q ss_pred             chhhh-----------------hhccC----CCCHHH-HHHHHHH---------HHHHHHHhhhc-----CCCCeeeCCC
Q 045343          605 TLASF-----------------LFGNL----KPSWNL-RTNIAFQ---------IARGLLYLHED-----CSAQIIHCDI  648 (813)
Q Consensus       605 sL~~~-----------------l~~~~----~l~~~~-~~~i~~~---------ia~gl~yLH~~-----~~~~ivH~dl  648 (813)
                      .+...                 |+...    .++... ......+         +.+.+..+...     ....++|+|+
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl  153 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV  153 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence            65421                 11111    111111 1111111         11112222111     1346899999


Q ss_pred             CCCcEEEcCCCCEEEeeccCccc
Q 045343          649 KPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       649 k~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .|.||++++++ +.|+||..+..
T Consensus       154 ~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       154 HAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             CcCcEEEeCCC-CEEEeccccCc
Confidence            99999999876 78999988764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.70  E-value=0.0096  Score=61.29  Aligned_cols=140  Identities=17%  Similarity=0.184  Sum_probs=79.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.|..|-...+|+.....+  +...+++|...... ...-....|+.++..+...++ +++++.+.    ..+||||+++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~--~~~~~vlR~~~~~~-~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G   76 (235)
T cd05157           4 KRFTGGITNKLVKVSNKED--NQDAVLVRVYGNKT-ELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPG   76 (235)
T ss_pred             EEcCCcccceEEEEEcCCC--CCCeEEEEEccCCc-cceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCC
Confidence            4577788889998864210  14567788664322 112234578888888854444 45544432    2489999998


Q ss_pred             Cchhhh-------h----------hccC-C----------CC-HHHHHHHHH----------------------HHHHHH
Q 045343          604 GTLASF-------L----------FGNL-K----------PS-WNLRTNIAF----------------------QIARGL  632 (813)
Q Consensus       604 gsL~~~-------l----------~~~~-~----------l~-~~~~~~i~~----------------------~ia~gl  632 (813)
                      ..+...       +          +... .          .. +..+..+..                      .+.+.+
T Consensus        77 ~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  156 (235)
T cd05157          77 RTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEI  156 (235)
T ss_pred             CcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHH
Confidence            765321       0          1100 0          11 222112211                      111111


Q ss_pred             HHh----hhc-CCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccc
Q 045343          633 LYL----HED-CSAQIIHCDIKPQNILLDD-YYNARISDFGLAKL  671 (813)
Q Consensus       633 ~yL----H~~-~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~  671 (813)
                      ..|    ... ....++|+|+.+.|||++. +..+.|+||..+..
T Consensus       157 ~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         157 SWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            111    111 2357999999999999998 57899999988754

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.57  E-value=0.0054  Score=65.63  Aligned_cols=139  Identities=16%  Similarity=0.148  Sum_probs=83.3

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEe------ecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFC------DEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~------~~~~~~~l  596 (813)
                      +.|..|....+|+....     +..+++|+...   ....+...|++++..+.+.+  +.+++...      ..++..++
T Consensus        20 ~~i~~G~~n~~y~v~~~-----~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~   91 (296)
T cd05153          20 EGISAGIENTNYFVTTD-----SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA   91 (296)
T ss_pred             ecccCccccceEEEEeC-----CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence            46777877899987652     33578887653   22345667777787775433  44554421      22345689


Q ss_pred             EEeecCCCchhh----hh----------hc---c--------CCCCHHHHH----------HHHHHHHHHHHHhhh----
Q 045343          597 VYEFLNNGTLAS----FL----------FG---N--------LKPSWNLRT----------NIAFQIARGLLYLHE----  637 (813)
Q Consensus       597 V~e~~~~gsL~~----~l----------~~---~--------~~l~~~~~~----------~i~~~ia~gl~yLH~----  637 (813)
                      |+++++|..+..    ..          +.   .        ....|....          .....+...+.++.+    
T Consensus        92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~  171 (296)
T cd05153          92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS  171 (296)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence            999999876532    00          10   0        001222111          011123334444443    


Q ss_pred             cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       638 ~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ....+++|+|+.|.||+++++..+.|.||+.+..
T Consensus       172 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         172 DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             cCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            1245799999999999999987789999988753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.27  E-value=0.041  Score=60.79  Aligned_cols=74  Identities=15%  Similarity=0.165  Sum_probs=50.5

Q ss_pred             cccceeeeeeEEEEEEeccCCcc-eEEEEEEeeccc-------cccchhhhheeeeeeccc---cCCcceEEeEeecCCc
Q 045343          525 EEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVF-------QDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQN  593 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~-~~vavK~l~~~~-------~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~  593 (813)
                      ++||.|.+..||++...    ++ +.++||.-....       .-..+++..|.+.|..+.   ..++++++.+  +.+.
T Consensus        32 ~elggGn~N~VyrV~~~----~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~  105 (401)
T PRK09550         32 REIGDGNLNLVFRVSDT----EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEEL  105 (401)
T ss_pred             eEcCCCceEEEEEEEeC----CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCC
Confidence            67999999999999874    33 478999843110       112345666777777652   2457777777  3456


Q ss_pred             eEEEEeecCCC
Q 045343          594 RLLVYEFLNNG  604 (813)
Q Consensus       594 ~~lV~e~~~~g  604 (813)
                      .++|||++++.
T Consensus       106 ~~lVME~L~~~  116 (401)
T PRK09550        106 AVTVMEDLSDH  116 (401)
T ss_pred             CEEEEecCCCc
Confidence            78999998864

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.98  E-value=0.026  Score=60.52  Aligned_cols=142  Identities=23%  Similarity=0.279  Sum_probs=82.2

Q ss_pred             cccceeeeeeEEEEEEecc---CCcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTT---RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~  600 (813)
                      +.|..|-...+|+.....+   +..+..+++|...... ........|.+++..+....+ .++++++..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            4456666678998865311   1124678888865432 233456778888888854444 355665542    358999


Q ss_pred             cCCCchhhh-----------------hhccC-CC--------C--HHHHHHH--------------------------HH
Q 045343          601 LNNGTLASF-----------------LFGNL-KP--------S--WNLRTNI--------------------------AF  626 (813)
Q Consensus       601 ~~~gsL~~~-----------------l~~~~-~l--------~--~~~~~~i--------------------------~~  626 (813)
                      ++|..+...                 ++... ..        +  |....++                          ..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            988766431                 01110 00        0  1111111                          11


Q ss_pred             HHHHHHHHhhh------cCCCCeeeCCCCCCcEEEcCC----CCEEEeeccCccc
Q 045343          627 QIARGLLYLHE------DCSAQIIHCDIKPQNILLDDY----YNARISDFGLAKL  671 (813)
Q Consensus       627 ~ia~gl~yLH~------~~~~~ivH~dlk~~NIll~~~----~~~kl~DfGla~~  671 (813)
                      .+.+-+..|..      .....++|+|+.+.||+++++    +.++++||..+..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22222333431      135679999999999999985    8899999998854

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=95.46  E-value=0.078  Score=57.37  Aligned_cols=139  Identities=12%  Similarity=0.107  Sum_probs=75.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeE------eecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGF------CDEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~------~~~~~~~~l  596 (813)
                      +.|+.|....+|+....    + ..+++|+.+.   ...++...|+.++..+...+  +.+.+..      .......++
T Consensus        28 ~~l~~G~~n~~y~v~t~----~-g~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~   99 (319)
T PRK05231         28 KGIAEGIENSNFFLTTT----Q-GEYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAA   99 (319)
T ss_pred             chhccccccceEEEEeC----C-CcEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEE
Confidence            45667777889987652    2 2578887652   12233444555565553222  3344431      122445789


Q ss_pred             EEeecCCCchhh-----h------h---hcc-C----------CCCH-HHHHH------------HHHH-HHHHHHHhhh
Q 045343          597 VYEFLNNGTLAS-----F------L---FGN-L----------KPSW-NLRTN------------IAFQ-IARGLLYLHE  637 (813)
Q Consensus       597 V~e~~~~gsL~~-----~------l---~~~-~----------~l~~-~~~~~------------i~~~-ia~gl~yLH~  637 (813)
                      ++||++|..+..     .      |   +.. .          .+.| .....            ...+ +...+..+..
T Consensus       100 l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  179 (319)
T PRK05231        100 IVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLAS  179 (319)
T ss_pred             EEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhc
Confidence            999999875421     1      1   110 0          0111 11111            1111 1112222221


Q ss_pred             ----cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          638 ----DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       638 ----~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                          ....+++|+|+++.||+++++...-|+||+.+..
T Consensus       180 ~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        180 AAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence                1345899999999999999776668999998753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.05  E-value=0.15  Score=54.75  Aligned_cols=140  Identities=15%  Similarity=0.188  Sum_probs=79.7

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEe------ecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFC------DEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~------~~~~~~~l  596 (813)
                      +.++.|....+|+....    ++ .+++|+.+..  ....+...|.+++..+....  +.+++...      ......++
T Consensus        28 ~~~~~G~~n~~y~v~t~----~~-~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTD----VG-RYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             cccCCccccceEEEEeC----CC-cEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence            45777777899987542    22 4667765432  12334556667777764322  44444422      12345689


Q ss_pred             EEeecCCCchhhh--------------hhcc-C-----------CCCHHHHHH------------HHHHHHHHHHHhhh-
Q 045343          597 VYEFLNNGTLASF--------------LFGN-L-----------KPSWNLRTN------------IAFQIARGLLYLHE-  637 (813)
Q Consensus       597 V~e~~~~gsL~~~--------------l~~~-~-----------~l~~~~~~~------------i~~~ia~gl~yLH~-  637 (813)
                      ++||++|..+...              ++.. .           ...|.....            ....+.+.++++.. 
T Consensus       101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~  180 (307)
T TIGR00938       101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF  180 (307)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence            9999988654210              1110 0           011221110            11123344555542 


Q ss_pred             ---cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          638 ---DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       638 ---~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                         ....+++|+|+++.||++++++...|.||+.+..
T Consensus       181 ~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       181 WPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             hhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence               2356899999999999999887778999998743

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.88  E-value=0.094  Score=55.39  Aligned_cols=32  Identities=28%  Similarity=0.484  Sum_probs=26.5

Q ss_pred             CCeeeCCCCCCcEEEcCCCC-EEEeeccCcccc
Q 045343          641 AQIIHCDIKPQNILLDDYYN-ARISDFGLAKLL  672 (813)
Q Consensus       641 ~~ivH~dlk~~NIll~~~~~-~kl~DfGla~~~  672 (813)
                      ..++|+|+++.|||+++++. .-|.||+.+...
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            45899999999999997555 569999988653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=94.65  E-value=0.16  Score=55.57  Aligned_cols=141  Identities=19%  Similarity=0.177  Sum_probs=81.6

Q ss_pred             ccceeeeeeEEEEEEeccC-CcceEEEEEEeeccccccchhhhheeeeeeccccCCcc-eEEeEeecCCceEEEEeecCC
Q 045343          526 EVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV-RLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      .|-.|-.-.+|+....... ..+..+++|....... ..-....|..++..+...++. ++++.+..+    .|+||+++
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~-~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g  117 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE-LFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA  117 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC-eeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence            4445667789987653221 1235688887654332 222336788888888655554 566665433    58999987


Q ss_pred             Cchhhh-----------------hhccC------CCCHHHHHHHHHH-----------------HHHHHHHhhh-----c
Q 045343          604 GTLASF-----------------LFGNL------KPSWNLRTNIAFQ-----------------IARGLLYLHE-----D  638 (813)
Q Consensus       604 gsL~~~-----------------l~~~~------~l~~~~~~~i~~~-----------------ia~gl~yLH~-----~  638 (813)
                      .+|...                 ++...      ...|....++..+                 +...+..|..     .
T Consensus       118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~  197 (344)
T PLN02236        118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD  197 (344)
T ss_pred             CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence            666421                 11111      1113333333211                 1112222221     1


Q ss_pred             CCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccc
Q 045343          639 CSAQIIHCDIKPQNILLDD-YYNARISDFGLAKL  671 (813)
Q Consensus       639 ~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~  671 (813)
                      ....++|+|+++.|||+++ ++.+.++||..+..
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            2457899999999999986 47899999988864

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=94.60  E-value=0.15  Score=54.51  Aligned_cols=112  Identities=24%  Similarity=0.327  Sum_probs=68.3

Q ss_pred             hhhhheeeeeecccc--CCcceEEeEeecCC--ceEEEEeecCCCchhh------------------hhh---cc-----
Q 045343          564 KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQ--NRLLVYEFLNNGTLAS------------------FLF---GN-----  613 (813)
Q Consensus       564 ~~~~~E~~~l~~l~h--~niv~l~g~~~~~~--~~~lV~e~~~~gsL~~------------------~l~---~~-----  613 (813)
                      ....+|..+|+.+.-  .-....++.|.++.  ..+.||+|+++..+.+                  +|.   +-     
T Consensus        66 ~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~  145 (321)
T COG3173          66 HDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGL  145 (321)
T ss_pred             hHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCC
Confidence            445667777777642  33556677787766  6799999998733221                  111   00     


Q ss_pred             ---C---------CCCHHHHHHHH--------HHHHHHHHHhhhcC-----CCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          614 ---L---------KPSWNLRTNIA--------FQIARGLLYLHEDC-----SAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       614 ---~---------~l~~~~~~~i~--------~~ia~gl~yLH~~~-----~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                         .         ...|....+.+        -....-..+|++..     ...++|+|+++.||++++..-+-|.||++
T Consensus       146 ~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~  225 (321)
T COG3173         146 PDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWEL  225 (321)
T ss_pred             CCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccc
Confidence               0         00122222100        12233345555432     35699999999999999988899999999


Q ss_pred             ccccccC
Q 045343          669 AKLLTLN  675 (813)
Q Consensus       669 a~~~~~~  675 (813)
                      +.+.++.
T Consensus       226 ~~lGDP~  232 (321)
T COG3173         226 ATLGDPL  232 (321)
T ss_pred             cccCCcH
Confidence            9876543

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=94.59  E-value=0.14  Score=55.72  Aligned_cols=143  Identities=18%  Similarity=0.245  Sum_probs=80.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcc-eEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV-RLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.|..|=...+|+........+...+.+|....... ..-...+|..+++.+...++- ++++++..+    +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcC
Confidence            345456667889886542222234678887654322 222346788888888766664 566665322    58999877


Q ss_pred             Cchhh-------hh----------hccC-----CC-CHHHHHHHHHHH----------------------HHHHHHhhh-
Q 045343          604 GTLAS-------FL----------FGNL-----KP-SWNLRTNIAFQI----------------------ARGLLYLHE-  637 (813)
Q Consensus       604 gsL~~-------~l----------~~~~-----~l-~~~~~~~i~~~i----------------------a~gl~yLH~-  637 (813)
                      ..|..       .+          +...     .+ -|....++..++                      .+-+..+.. 
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            65522       01          1111     01 133333222221                      111222211 


Q ss_pred             ----cCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCcccc
Q 045343          638 ----DCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLL  672 (813)
Q Consensus       638 ----~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~  672 (813)
                          .......|+|+.+.|||+++ ++.++++||..|...
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence                11235899999999999975 578999999988643

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.59  E-value=0.095  Score=55.48  Aligned_cols=72  Identities=21%  Similarity=0.311  Sum_probs=46.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc---cCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.|+.|....+|+..     .++..+.||.-.   ......|..|.+-|+.|.   -..+.+++++....+..+||+||+
T Consensus        23 ~~v~GG~i~~a~~~~-----~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   23 EPVSGGDINEAYRLD-----TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEE--SSSSEEEEEE-----TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             EecCCCChhheEEEE-----CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            568888888999865     266788999865   234457888888888773   455789999887777789999999


Q ss_pred             CCC
Q 045343          602 NNG  604 (813)
Q Consensus       602 ~~g  604 (813)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.33  E-value=0.092  Score=52.06  Aligned_cols=138  Identities=17%  Similarity=0.201  Sum_probs=82.4

Q ss_pred             eEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHH
Q 045343          548 TAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF  626 (813)
Q Consensus       548 ~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~  626 (813)
                      ....+|++....-. ...-|.++..++++++  .|++|..=  ..-...++.|+|..-..            .. ..++.
T Consensus        86 G~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------------~~-~N~i~  148 (308)
T PF07387_consen   86 GPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------------NF-SNFIT  148 (308)
T ss_pred             chhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------------ch-hHHHH
Confidence            35567776543222 2344677777777775  35565521  33356688888744211            01 11122


Q ss_pred             HHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccc
Q 045343          627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVD  706 (813)
Q Consensus       627 ~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~D  706 (813)
                      .=++.|.-.|.+ +.+.+|+|-.|+||+-|..|.+||.|=+.-..  .            +.-|.--   .....++++.
T Consensus       149 agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--~------------~V~~vN~---~Y~~lT~~aE  210 (308)
T PF07387_consen  149 AGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--N------------QVNMVNI---EYESLTQEAE  210 (308)
T ss_pred             HhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh--h------------eeeEEee---eccccChHHH
Confidence            224667788866 77999999999999999999999999654211  0            1111111   1234566777


Q ss_pred             hhhHHHHHHHHHhC
Q 045343          707 VYSFGVLLLEIISC  720 (813)
Q Consensus       707 VwS~Gvvl~elltG  720 (813)
                      +-+|=.-+++++..
T Consensus       211 ~~~fv~s~l~~v~~  224 (308)
T PF07387_consen  211 VKVFVKSCLKLVEK  224 (308)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77777777777653

The function of this family is unknown.

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.23  E-value=0.33  Score=53.62  Aligned_cols=73  Identities=18%  Similarity=0.228  Sum_probs=47.2

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----c---ccchhhhheeeeeeccc---cCCcceEEeEeecCCc
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----Q---DGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQN  593 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~---~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~  593 (813)
                      .++||.|....||+...     .+..++||+-....    .   ....+-..|.+.|+.+.   ..++.+++.++.  +.
T Consensus        37 ~~eiggGn~N~VyrV~~-----~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~  109 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVS-----SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TM  109 (418)
T ss_pred             EEEcCCCceeeEEEEEc-----CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CC
Confidence            36789999999999765     23458888764111    1   12233344455555443   357888998887  45


Q ss_pred             eEEEEeecCC
Q 045343          594 RLLVYEFLNN  603 (813)
Q Consensus       594 ~~lV~e~~~~  603 (813)
                      .+++||++++
T Consensus       110 ~vlvME~L~~  119 (418)
T PLN02756        110 ALIGMRYLEP  119 (418)
T ss_pred             CEEEEeecCC
Confidence            6888999976

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.07  E-value=0.012  Score=72.47  Aligned_cols=155  Identities=12%  Similarity=-0.039  Sum_probs=106.8

Q ss_pred             heeeeeeccccCCcceEEeEee--cCCceEEEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhc--C
Q 045343          568 NEVVVIGQTHHKNLVRLLGFCD--EGQNRLLVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHED--C  639 (813)
Q Consensus       568 ~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~--~  639 (813)
                      .|...++...|+++.....-..  +..+.+.+++|+..|.+.+.|-..    ..++.......-.+......-.|..  .
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred             hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence            3444555567888765554442  334568889999999999988543    2223333332223323444444432  2


Q ss_pred             CCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh
Q 045343          640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS  719 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt  719 (813)
                      +.-.+|++||+-|.+|..+..+|+.++|+.+...+....  .....+++-|++|++.....++.++|+|..|+-+|+.--
T Consensus      1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf--~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF--FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred             CccchhhhhhhhccceecCCcccccccccccccCchHhh--hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence            345789999999999999999999999999843332221  334567888999999988889999999999999999877


Q ss_pred             CCcCC
Q 045343          720 CRKSF  724 (813)
Q Consensus       720 G~~p~  724 (813)
                      |..+|
T Consensus      1436 ~n~~f 1440 (2724)
T KOG1826|consen 1436 GNAYF 1440 (2724)
T ss_pred             ccHHH
Confidence            77665

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.28  E-value=0.076  Score=58.86  Aligned_cols=162  Identities=22%  Similarity=0.283  Sum_probs=86.8

Q ss_pred             hhhheeeeeeccccCCcceEEeEeecCC-ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 045343          565 EFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI  643 (813)
Q Consensus       565 ~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~i  643 (813)
                      ++.-...+++.++|+|+...+.+..... ...+|+|++ +.||++++..+.. -      .....      -|     ++
T Consensus        28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l-~------~~s~~------~~-----~~   88 (725)
T KOG1093|consen   28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNL-K------DESLL------AH-----GV   88 (725)
T ss_pred             HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhccc-c------hhhhc------cc-----cc
Confidence            4455566778889999999999876544 456788876 6688888765431 1      00001      11     22


Q ss_pred             eeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcC
Q 045343          644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS  723 (813)
Q Consensus       644 vH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p  723 (813)
                      .|-     ||       .+++|    ......                 |     ....+|+|||++|.++.|+.-|...
T Consensus        89 ~~~-----~~-------~~~td----~~~t~~-----------------~-----~~~~pKsdVwsl~~i~~el~L~~~l  130 (725)
T KOG1093|consen   89 LHL-----NI-------IYITD----HFLTKY-----------------P-----SPIGPKSDVWSLGFIILELYLGISL  130 (725)
T ss_pred             cee-----hh-------hhccc----cccccC-----------------C-----CCCCcchhhhhHHHHHHHHHHhhHH
Confidence            221     11       22333    000000                 1     0112599999999999999988765


Q ss_pred             CCcccchhhhhhHHHHHHh-hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHH
Q 045343          724 FDIEMGEEYAILTDWAFDC-YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV  789 (813)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev  789 (813)
                      +......++...   .... ........+....   ....++.+.++++...|+-..|..||...+.
T Consensus       131 ~~~~~~s~~l~~---i~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~  191 (725)
T KOG1093|consen  131 EAELTESEYLEI---LLKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRPLPMEL  191 (725)
T ss_pred             HHHHHHHHHHHH---HHHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCccccccccchhHH
Confidence            542211111110   0000 0011111111111   1223566778889999999999988865443

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=93.13  E-value=0.052  Score=56.82  Aligned_cols=131  Identities=13%  Similarity=0.096  Sum_probs=82.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc----------------c------cchhhhheeeeeecccc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ----------------D------GEKEFKNEVVVIGQTHH  578 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~----------------~------~~~~~~~E~~~l~~l~h  578 (813)
                      +.+.+.||-|--+-||.+...    ++.+.++|.-+....                .      ..-....|...|+.+.-
T Consensus        94 ~svGnqIGVGKESDIY~v~d~----~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e  169 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE----EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE  169 (465)
T ss_pred             hhhccccccccccceEEEecC----CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            557789999999999998764    567777774321100                0      00113456666666642


Q ss_pred             -C-CcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          579 -K-NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       579 -~-niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                       - -+.+.+++    +..++|||++.+-.|...-+-.   +...+   ...+..-+.-|.   ..|+||+|..-=||+++
T Consensus       170 ~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~---d~~~l---y~~lm~~Iv~la---~~GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  170 RGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHVE---DPPTL---YDDLMGLIVRLA---NHGLIHGDFNEFNIMVK  236 (465)
T ss_pred             cCCCCCCcccc----cceeeHHHhhcccceeeeeecC---ChHHH---HHHHHHHHHHHH---HcCceecccchheeEEe
Confidence             1 23444443    4568899999887776543221   22222   223333333444   33999999999999999


Q ss_pred             CCCCEEEeeccC
Q 045343          657 DYYNARISDFGL  668 (813)
Q Consensus       657 ~~~~~kl~DfGl  668 (813)
                      +++.++++||--
T Consensus       237 dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  237 DDDKIVVIDFPQ  248 (465)
T ss_pred             cCCCEEEeechH
Confidence            999999999964

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.88  E-value=0.15  Score=55.19  Aligned_cols=62  Identities=19%  Similarity=0.228  Sum_probs=43.0

Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                      ...|+-+|+.+.++..++..... +++.+.+++.-.+.|+.-+-.  --+.+|.|+.|.||++.-
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~~-pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKSQ-PEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             cceeeeeccccccHHhhhhcccC-hHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEe
Confidence            34677778888898888876543 345666666655555543331  237999999999999953

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	813
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-55
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-54
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-42
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-42
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-42
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		6e-41
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-41
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-39
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-24
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-24
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-23
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-23
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		6e-22
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-21
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-21
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-21
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-21
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-21
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-21
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-21
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-21
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-21
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-21
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-21
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-21
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-21
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-21
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-21
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-21
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-21
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-21
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-21
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-21
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-21
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-21
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-21
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-21
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-21
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-21
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-21
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-21
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		4e-21
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-21
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-21
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-21
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		4e-21
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-21
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-21
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-21
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-21
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-21
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-21
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		6e-21
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		6e-21
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		6e-21
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		6e-21
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-21
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-21
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		9e-21
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		9e-21
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		9e-21
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-20
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-20
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-20
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-20
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-20
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-20
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		1e-20
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-20
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-20
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-20
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-20
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-20
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-20
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-20
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-20
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-20
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-20
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-20
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-20
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-20
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-20
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-20
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-20
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-20
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-20
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-20
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-20
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-20
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-20
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		8e-20
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		8e-20
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		9e-20
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		9e-20
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		9e-20
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-19
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-19
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-19
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-19
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-19
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-19
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-19
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-19
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-19
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-19
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-19
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-19
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-19
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-19
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-19
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-19
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-19
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-19
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-19
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-19
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-19
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-19
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-19
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-19
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-19
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-19
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-19
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-19
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-19
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-19
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-19
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		9e-19
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-18
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-18
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-18
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-18
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-18
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-18
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-18
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-18
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-18
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-18
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-18
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-18
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-18
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-18
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-18
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-18
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-18
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		4e-18
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-18
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-18
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		4e-18
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		5e-18
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-18
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-18
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		6e-18
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-18
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-18
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-18
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-18
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-18
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-18
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		9e-18
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-18
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-18
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		9e-18
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-17
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-17
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-17
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-17
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-17
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-17
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-17
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-17
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-17
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-17
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-17
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-17
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-17
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-17
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-17
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-17
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-17
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-17
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-17
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-17
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-17
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-17
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-17
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-17
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-17
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-17
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-17
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-17
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-17
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-17
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-17
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-17
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-17
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-17
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-17
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-17
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-17
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-17
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-17
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-17
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-17
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-17
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-17
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-17
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		6e-17
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		8e-17
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-17
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-16
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-16
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-16
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-16
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-16
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-16
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-16
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-16
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-16
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-16
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-16
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-16
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-16
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-16
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-16
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-16
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-16
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-16
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-16
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		5e-16
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-16
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-16
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-16
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-16
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-16
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-16
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-16
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-16
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-16
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-16
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-16
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		6e-16
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-16
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-16
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-16
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		6e-16
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-16
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-16
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-16
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-16
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		7e-16
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-16
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		8e-16
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-16
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-16
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-16
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		8e-16
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		8e-16
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-16
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-16
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		9e-16
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		9e-16
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		9e-16
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		9e-16
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		9e-16
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-15
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-15
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-15
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-15
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-15
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-15
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-15
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-15
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-15
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-15
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-15
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-15
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-15
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-15
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-15
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-15
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-15
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-15
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-15
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-15
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-15
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-15
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-15
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-15
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-15
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-15
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-15
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-15
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-15
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-15
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-15
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-15
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-15
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-15
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-15
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-15
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-15
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-15
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-15
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-15
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-15
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-15
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-15
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-15
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-15
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-15
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-15
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-15
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-15
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-15
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-15
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-15
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-15
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-15
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-15
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-15
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-15
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-15
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-15
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-15
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-15
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-15
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-15
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-15
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		3e-15
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-15
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-15
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-15
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-15
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-15
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-15
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-15
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-15
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-15
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-15
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-15
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-15
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-15
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-15
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-15
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		5e-15
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-15
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-15
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-15
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-15
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-15
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-15
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-15
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-15
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-15
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		6e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		6e-15
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-15
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-15
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-15
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-15
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		8e-15
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		8e-15
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		9e-15
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-14
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-14
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-14
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-14
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-14
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-14
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-14
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-14
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-14
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-14
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-14
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-14
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-14
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-14
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-14
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-14
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-14
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-14
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-14
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-14
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-14
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-14
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-14
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-14
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-14
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-14
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-14
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-14
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-14
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-14
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-14
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-14
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-14
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-14
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-14
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-14
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-14
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-14
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-14
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		4e-14
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-14
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		5e-14
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		5e-14
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		5e-14
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		5e-14
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-14
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-14
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-14
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-14
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		6e-14
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-14
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		6e-14
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		6e-14
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-14
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-14
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		7e-14
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-14
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-14
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-14
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-14
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-14
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-14
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		8e-14
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-14
4fl3_A	635	Structural And Biophysical Characterization Of The		9e-14
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		9e-14
4fl2_A	636	Structural And Biophysical Characterization Of The		9e-14
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-14
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		9e-14
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-13
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-13
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-13
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-13
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-13
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-13
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-13
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-13
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-13
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-13
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-13
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-13
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-13
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-13
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-13
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-13
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-13
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-13
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-13
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-13
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-13
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-13
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-13
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-13
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-13
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-13
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-13
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-13
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-13
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-13
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-13
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-13
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-13
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-13
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-13
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-13
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-13
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-13
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-13
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-13
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-13
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-13
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-13
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-13
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-13
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-13
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-13
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-13
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-13
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-13
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-13
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-13
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-13
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-13
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-13
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-13
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-13
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-13
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-13
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-13
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-13
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-13
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-13
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-13
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-13
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-13
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-13
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-13
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-13
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		5e-13
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-13
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-13
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-13
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-13
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-13
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-13
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-13
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		7e-13
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		7e-13
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		7e-13
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		7e-13
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		7e-13
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-13
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		8e-13
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		8e-13
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		8e-13
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		8e-13
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-13
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-13
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		8e-13
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-13
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		9e-13
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		9e-13
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		9e-13
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-13
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		9e-13
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-12
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-12
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-12
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-12
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-12
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-12
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-12
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-12
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-12
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-12
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-12
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-12
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-12
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-12
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-12
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-12
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-12
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-12
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		2e-12
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-12
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-12
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-12
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-12
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-12
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-12
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-12
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-12
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-12
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-12
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-12
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-12
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-12
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-12
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-12
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-12
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-12
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-12
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-12
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-12
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-12
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-12
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-12
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-12
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-12
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-12
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-12
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-12
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		3e-12
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-12
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-12
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-12
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-12
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-12
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-12
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-12
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-12
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		3e-12
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-12
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-12
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-12
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-12
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-12
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-12
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-12
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-12
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-12
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		4e-12
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-12
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-12
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		4e-12
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-12
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		4e-12
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		4e-12
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		5e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-12
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-12
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		5e-12
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		5e-12
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		6e-12
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		6e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-12
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		6e-12
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		6e-12
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		6e-12
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		7e-12
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-12
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		7e-12
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		8e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		8e-12
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		8e-12
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		8e-12
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		8e-12
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-12
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		8e-12
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		8e-12
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-12
4exu_A	371	Mapk13, Inactive Form Length = 371		9e-12
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-11
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-11
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-11
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-11
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-11
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-11
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-11
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-11
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-11
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-11
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-11
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-11
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-11
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-11
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-11
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-11
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-11
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		2e-11
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-11
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-11
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-11
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-11
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-11
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-11
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-11
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-11
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-11
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-11
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-11
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-11
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-11
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-11
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-11
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-11
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-11
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-11
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-11
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-11
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-11
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-11
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		3e-11
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-11
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-11
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-11
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-11
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-11
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-11
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-11
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-11
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		4e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		4e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-11
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-11
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-11
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-11
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-11
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-11
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-11
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		5e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-11
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		5e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-11
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		5e-11
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-11
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		6e-11
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-11
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		6e-11
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		6e-11
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		6e-11
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		6e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		6e-11
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-11
3soa_A	444	Full-Length Human Camkii Length = 444		6e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-11
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		6e-11
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-11
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-11
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-11
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-11
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-11
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		9e-11
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		9e-11
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-10
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-10
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		1e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-10
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-10
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-10
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-10
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-10
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-10
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-10
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-10
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-10
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-10
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-10
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-10
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-10
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-10
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-10
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-10
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-10
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-10
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-10
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-10
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-10
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-10
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-10
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-10
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-10
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-10
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-10
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-10
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-10
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-10
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		3e-10
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		3e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-10
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-10
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-10
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		7e-10
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		7e-10
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		8e-10
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-10
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-10
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		9e-10
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		9e-10
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		9e-10
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-09
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-09
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-09
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-09
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-09
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-09
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-09
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-09
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-09
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-09
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-09
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-09
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-09
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-09
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-09
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-09
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-09
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-09
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-09
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-09
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-09
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-09
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-09
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		5e-09
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		7e-09
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		7e-09
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		8e-09
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		8e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		8e-09
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		8e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		8e-09
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		8e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-09
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		8e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-09
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		8e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-09
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		9e-09
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		9e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		9e-09
4ae6_A	343	Structure And Function Of The Human Sperm-specific		9e-09
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		9e-09
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		9e-09
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-08
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-08
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-08
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-08
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-08
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-08
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-08
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-08
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-08
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-08
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-08
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-08
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-08
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-08
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-08
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-08
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-08
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-08
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-08
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-08
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-08
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-08
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-08
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-08
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-08
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-08
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		3e-08
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-08
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-08
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-08
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		5e-08
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-08
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		5e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		6e-08
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-08
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		6e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		7e-08
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		7e-08
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		7e-08
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		8e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		8e-08
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		8e-08
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		8e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		8e-08
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		8e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		8e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		9e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		9e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-08
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		9e-08
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		1e-07
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-07
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-07
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-07
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-07
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-07
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		1e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-07
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-07
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-07
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-07
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		3e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		4e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		5e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		5e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		6e-07
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		6e-07
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		6e-07
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		8e-07
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		9e-07
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		1e-06
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-06
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		1e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		1e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-06
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		1e-06
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-06
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-06
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-06
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-06
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		3e-06
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		3e-06
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-06
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		4e-06
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		4e-06
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		5e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/298 (40%), Positives = 179/298 (60%), Gaps = 14/298 (4%)
Query: 507 NLPCFSYKELEEATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGE 563
            L  FS +EL+ A+DNF  K  +GRG FG VYKG +       T VAVK+L +   Q GE
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----ADGTLVAVKRLKEERXQGGE 79
Query: 564 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WN 619
            +F+ EV +I    H+NL+RL GFC     RLLVY ++ NG++AS L    +      W 
Sbjct: 80  LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
            R  IA   ARGL YLH+ C  +IIH D+K  NILLD+ + A + DFGLAKL+   +   
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXH 198
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTD 737
           +  A+RGT G++APE+      + K DV+ +GV+LLE+I+ +++FD+     ++  +L D
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG 795
           W     + +KL+ LV+ D++     + VE+L+ V++ C Q  P  RP M +V++MLEG
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  209 bits (532), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 177/298 (59%), Gaps = 14/298 (4%)
Query: 507 NLPCFSYKELEEATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGE 563
            L  FS +EL+ A+DNF  K  +GRG FG VYKG +         VAVK+L +   Q GE
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL----ADGXLVAVKRLKEERTQGGE 71
Query: 564 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WN 619
            +F+ EV +I    H+NL+RL GFC     RLLVY ++ NG++AS L    +      W 
Sbjct: 72  LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
            R  IA   ARGL YLH+ C  +IIH D+K  NILLD+ + A + DFGLAKL+   +   
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDXH 190
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTD 737
           +  A+RG  G++APE+      + K DV+ +GV+LLE+I+ +++FD+     ++  +L D
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG 795
           W     + +KL+ LV+ D++     + VE+L+ V++ C Q  P  RP M +V++MLEG
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 167/305 (54%), Gaps = 26/305 (8%)
Query: 505 ETNLPCFSYKELEEATDNFKE--------EVGRGSFGIVYKGVILTTRTSTTAVAVKKL- 555
           +T    FS+ EL+  T+NF E        ++G G FG+VYKG +     + T VAVKKL 
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 63
Query: 556 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 609
              D   ++ +++F  E+ V+ +  H+NLV LLGF  +G +  LVY ++ NG+L    S 
Sbjct: 64  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 610 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
           L G    SW++R  IA   A G+ +LHE+     IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
           +         + + I GT  Y+APE  R   IT K D+YSFGV+LLEII+   + D E  
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           E   +L          + ++D ++  M    D   VE +  V+  C+ E  + RP +KKV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 790 LQMLE 794
            Q+L+
Sbjct: 298 QQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 26/305 (8%)
Query: 505 ETNLPCFSYKELEEATDNFKE--------EVGRGSFGIVYKGVILTTRTSTTAVAVKKL- 555
           +T    FS+ EL+  T+NF E        ++G G FG+VYKG +     + T VAVKKL 
Sbjct: 3   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 57
Query: 556 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 609
              D   ++ +++F  E+ V+ +  H+NLV LLGF  +G +  LVY ++ NG+L    S 
Sbjct: 58  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 610 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
           L G    SW++R  IA   A G+ +LHE+     IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
           +         +   I GT  Y+APE  R   IT K D+YSFGV+LLEII+   + D E  
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVD-EHR 232
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           E   +L          + ++D ++  M    D   VE +  V+  C+ E  + RP +KKV
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 790 LQMLE 794
            Q+L+
Sbjct: 292 QQLLQ 296

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  169 bits (429), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 166/305 (54%), Gaps = 26/305 (8%)
Query: 505 ETNLPCFSYKELEEATDNFKE--------EVGRGSFGIVYKGVILTTRTSTTAVAVKKL- 555
           +T    FS+ EL+  T+NF E        ++G G FG+VYKG +     + T VAVKKL 
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 63
Query: 556 ---DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SF 609
              D   ++ +++F  E+ V+ +  H+NLV LLGF  +G +  LVY ++ NG+L    S 
Sbjct: 64  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 610 LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
           L G    SW++R  IA   A G+ +LHE+     IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
           +         +   I GT  Y+APE  R   IT K D+YSFGV+LLEII+   + D E  
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           E   +L          + ++D ++  M    D   VE +  V+  C+ E  + RP +KKV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 790 LQMLE 794
            Q+L+
Sbjct: 298 QQLLQ 302

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  166 bits (419), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 161/297 (54%), Gaps = 17/297 (5%)
Query: 508 LPCFSYK----ELEEATDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD 561
           +P  SY+    +LEEAT+NF  +  +G G FG VYKGV+         VA+K+       
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL----RDGAKVALKRRTPESSQ 77
Query: 562 GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----S 617
           G +EF+ E+  +    H +LV L+GFCDE    +L+Y+++ NG L   L+G+  P    S
Sbjct: 78  GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 618 WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
           W  R  I    ARGL YLH   +  IIH D+K  NILLD+ +  +I+DFG++K  T    
Sbjct: 138 WEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
             +   ++GT GY+ PE+F    +T K DVYSFGV+L E++  R +    +  E   L +
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           WA + + N +L+ +V+ ++      + + K    ++ C+      RP+M  VL  LE
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  165 bits (418), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 161/297 (54%), Gaps = 17/297 (5%)
Query: 508 LPCFSYK----ELEEATDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD 561
           +P  SY+    +LEEAT+NF  +  +G G FG VYKGV+         VA+K+       
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL----RDGAKVALKRRTPESSQ 77
Query: 562 GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----S 617
           G +EF+ E+  +    H +LV L+GFCDE    +L+Y+++ NG L   L+G+  P    S
Sbjct: 78  GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 618 WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
           W  R  I    ARGL YLH   +  IIH D+K  NILLD+ +  +I+DFG++K  T    
Sbjct: 138 WEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
             +   ++GT GY+ PE+F    +T K DVYSFGV+L E++  R +    +  E   L +
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           WA + + N +L+ +V+ ++      + + K    ++ C+      RP+M  VL  LE
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 506 TNLPCFSYKELEEATDNFKE--------EVGRGSFGIVYKGVILTTRTSTTAVAVKKL-- 555
           T    FS+ EL+  T+NF E        + G G FG+VYKG +     + T VAVKKL  
Sbjct: 1   TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-----NNTTVAVKKLAA 55
Query: 556 --DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA---SFL 610
             D   ++ +++F  E+ V  +  H+NLV LLGF  +G +  LVY +  NG+L    S L
Sbjct: 56  MVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 611 FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
            G    SW+ R  IA   A G+ +LHE+     IH DIK  NILLD+ + A+ISDFGLA+
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 172
Query: 671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
                      + I GT  Y APE  R   IT K D+YSFGV+LLEII+   + D E  E
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVD-EHRE 230
Query: 731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
              +L          + ++D ++       D   VE    V+  C+ E  + RP +KKV 
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 791 QMLE 794
           Q+L+
Sbjct: 290 QLLQ 293

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 40/293 (13%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           N KE++G GSFG V++        S  AV +        +   EF  EV ++ +  H N+
Sbjct: 40  NIKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHED 638
           V  +G   +  N  +V E+L+ G+L   L       +     R ++A+ +A+G+ YLH +
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  I+H D+K  N+L+D  Y  ++ DFGL++L       +   A  GT  ++APE  R+
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPEVLRD 213
Query: 699 STITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NEKLDD 750
                K DVYSFGV+L E+ + ++ + ++   +  A +    F C R       N ++  
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQVAA 270
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
           ++EG                    C   +P  RP+   ++ +L  +++ ++PP
Sbjct: 271 IIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 44/295 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           N KE++G GSFG V++        S  AV +        +   EF  EV ++ +  H N+
Sbjct: 40  NIKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHED 638
           V  +G   +  N  +V E+L+ G+L   L       +     R ++A+ +A+G+ YLH +
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL--TLNQSKAIRTAIRGTKGYVAPEWF 696
            +  I+H ++K  N+L+D  Y  ++ DFGL++L   T   SK+      GT  ++APE  
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA----GTPEWMAPEVL 211
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NEKL 748
           R+     K DVYSFGV+L E+ + ++ + ++   +  A +    F C R       N ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQV 268
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
             ++EG                    C   +P  RP+   ++ +L  +++ ++PP
Sbjct: 269 AAIIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 37/291 (12%)
Query: 507 NLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF 566
           +L    YKE+E      +E VGRG+FG+V K      +     VA+K+++   +   K F
Sbjct: 2   SLHMIDYKEIE-----VEEVVGRGAFGVVCKA-----KWRAKDVAIKQIES--ESERKAF 49
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIA 625
             E+  + + +H N+V+L G C       LV E+   G+L + L G    P +     ++
Sbjct: 50  IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 626 F--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRT 682
           +  Q ++G+ YLH      +IH D+KP N+LL       +I DFG A  +  +      T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-----T 162
Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
             +G+  ++APE F  S  + K DV+S+G++L E+I+ RK FD   G  + I+  WA   
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-- 218
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
             N     L++      N  K +E L+     C  +DPS RP+M+++++++
Sbjct: 219 -HNGTRPPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIM 259

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 37/291 (12%)
Query: 507 NLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF 566
           +L    YKE+E      +E VGRG+FG+V K      +     VA+K+++   +   K F
Sbjct: 1   SLHMIDYKEIE-----VEEVVGRGAFGVVCKA-----KWRAKDVAIKQIES--ESERKAF 48
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIA 625
             E+  + + +H N+V+L G C       LV E+   G+L + L G    P +     ++
Sbjct: 49  IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 626 F--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRT 682
           +  Q ++G+ YLH      +IH D+KP N+LL       +I DFG A  +  +      T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-----T 161
Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
             +G+  ++APE F  S  + K DV+S+G++L E+I+ RK FD   G  + I+  WA   
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-- 217
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
             N     L++      N  K +E L+     C  +DPS RP+M+++++++
Sbjct: 218 -HNGTRPPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIM 258

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 51  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT 227

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 25  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 85  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 52  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 32  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ YL   
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 20/236 (8%)
Query: 500 GDGTIETNLPCFSYKELEEATDN-----------FKEEVGRGSFGIVYKGVILTTRTSTT 548
           G GT+  +L   +  EL +A  +           F E +GRG FG VY G +L       
Sbjct: 1   GPGTVHIDLSALN-PELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKI 59
Query: 549 AVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLVYEFLNNGTL 606
             AVK L+R+   GE  +F  E +++    H N++ LLG C   + + L+V  ++ +G L
Sbjct: 60  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 607 ASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
            +F+      P+         Q+A+G+ +L    S + +H D+  +N +LD+ +  +++D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 666 FGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           FGLA+ +   +  ++  +T  +    ++A E  +    T K DV+SFGVLL E+++
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 29/303 (9%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD 561
           G ++ + P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     +
Sbjct: 1   GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTME 57
Query: 562 GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN-- 619
            E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  
Sbjct: 58  VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
           +   +A QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTD 737
              A    K + APE    +  + K DV++FGVLL EI +   S    I++ + Y     
Sbjct: 174 HAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY----- 227
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                       +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + 
Sbjct: 228 ------------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
Query: 798 EVS 800
           + S
Sbjct: 276 QES 278

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 72
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 73  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 132 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 187
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 233
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
            G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 234 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQP 288

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 71
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 72  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 131 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 186
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 232
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
            G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 233 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 287

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 195
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P++RPT  +++ +L+  +  S P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 195
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 69
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 70  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 129 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 184
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 230
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
            G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 231 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 285

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 21  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 81  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR---KGGKGLLP 192
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 237
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 238 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 73
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 74  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 133 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 188
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 234
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
            G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 235 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 289

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 29/303 (9%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD 561
           G ++ + P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     +
Sbjct: 1   GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTME 57
Query: 562 GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN-- 619
            E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  
Sbjct: 58  VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
           +   +A QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTD 737
              A    K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L  
Sbjct: 174 HAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE- 231
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                YR E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + 
Sbjct: 232 ---KDYRMERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
Query: 798 EVS 800
           + S
Sbjct: 276 QES 278

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 30/296 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 64  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 224
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
            G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 225 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 38  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 98  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 29/303 (9%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD 561
           G ++ + P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     +
Sbjct: 1   GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTME 57
Query: 562 GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWN 619
            E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  
Sbjct: 58  VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
           +   +A QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTD 737
              A    K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L  
Sbjct: 174 HAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE- 231
Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                YR E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + 
Sbjct: 232 ---KDYRMERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
Query: 798 EVS 800
           + S
Sbjct: 276 QES 278

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 37/296 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    +E +G G FG V +G +       + VA+K L   + + ++ EF +E  +
Sbjct: 11  KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G        +++ EF+ NG L SFL      F  ++    LR     
Sbjct: 71  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG---- 126
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL E      +H D+  +NIL++     ++SDFGL++ L  N S    T+  G
Sbjct: 127 -IASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFD 741
            K    + APE       T+  D +S+G+++ E++S   R  +D+               
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-------------- 228
Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              N+ + + +E D        C   L  + + C Q+D + RP   +V+  L+ ++
Sbjct: 229 ---NQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 34  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 31  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 8/203 (3%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKN 580
           +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++    H N
Sbjct: 33  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 581 LVRLLGFCDEGQ-NRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHED 638
           ++ LLG C   + + L+V  ++ +G L +F+      P+         Q+A+G+ +L   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAPEWF 696
            S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++A E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
           +    T K DV+SFGVLL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 150/300 (50%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 17  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 77  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR---KGGKGLL 187
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 232
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L+ +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 233 QVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 291

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E++ A    +E +G G FG VY+   +    +  A      + + Q  E   + E  +  
Sbjct: 3   EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIEN-VRQEAKLFA 61
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
              H N++ L G C +  N  LV EF   G L   L G   P  ++  N A QIARG+ Y
Sbjct: 62  MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-DILVNWAVQIARGMNY 120
Query: 635 LHEDCSAQIIHCDIKPQNILL------DDYYNA--RISDFGLAKLLTLNQSKAIRTAIRG 686
           LH++    IIH D+K  NIL+       D  N   +I+DFGLA+       +  + +  G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAG 176
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
              ++APE  R S  +   DV+S+GVLL E+++    F
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 65
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 66  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 125 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 180
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 226
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 227 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 37/296 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    +E +G G FG V +G +       + VA+K L   + + ++ EF +E  +
Sbjct: 9   KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G        +++ EF+ NG L SFL      F  ++    LR     
Sbjct: 69  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG---- 124
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL E      +H D+  +NIL++     ++SDFGL++ L  N S    T+  G
Sbjct: 125 -IASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFD 741
            K    + APE       T+  D +S+G+++ E++S   R  +D+               
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-------------- 226
Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              N+ + + +E D        C   L  + + C Q+D + RP   +V+  L+ ++
Sbjct: 227 ---NQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR---KGGKGLL 196
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 241
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 242 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 300

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 64  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 224
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 225 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score =  100 bits (248), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 32/309 (10%)
Query: 496 RNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           RN P   TI    P +   E+E      K ++G G +G VY+GV    +  +  VAVK L
Sbjct: 200 RNKP---TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL 253
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GN 613
                + E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L     
Sbjct: 254 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 312
Query: 614 LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT 673
            + S  +   +A QI+  + YL +      IH ++  +N L+ + +  +++DFGL++L+T
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEE 731
            +   A   A    K + APE    +  + K DV++FGVLL EI +   S    I++ + 
Sbjct: 370 GDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 428
Query: 732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           Y +L       YR E+ +              C EK+  +   C Q +PS RP+  ++ Q
Sbjct: 429 YELLE----KDYRMERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 792 MLEGVVEVS 800
             E + + S
Sbjct: 472 AFETMFQES 480

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 64
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 65  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 124 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFPIKWTA 179
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 225
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 226 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 69  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 229
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 230 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 23  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 83  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 194
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 239
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 240 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 294

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 28/307 (9%)
Query: 496 RNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           RN P   T+    P +   E+E      K ++G G +G VY+GV    +  +  VAVK L
Sbjct: 239 RNKP---TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL 292
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
                + E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +
Sbjct: 293 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 351
Query: 616 PSWN--LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT 673
              N  +   +A QI+  + YL +      IH ++  +N L+ + +  +++DFGL++L+T
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 733
            +   A   A    K + APE    +  + K DV++FGVLL EI +            Y 
Sbjct: 409 GDTYTAHAGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YG 455
Query: 734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
           +      D     ++ +L+E D        C EK+  +   C Q +PS RP+  ++ Q  
Sbjct: 456 MSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
Query: 794 EGVVEVS 800
           E + + S
Sbjct: 513 ETMFQES 519

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYR---KGGKGLLP 195
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 69
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 70  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 129 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 184
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 230
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 231 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 48/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGN----LKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L++ E +  G L S+L        N      PS +    +A +IA G+
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 203
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 248
Query: 748 -LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVSL 801
            L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS 
Sbjct: 249 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 64  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 224
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 225 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H D+  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 195
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P +RPT  +++ +L+  +  S P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 59  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 118 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 173
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 219
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 220 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 50/301 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 196
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 241
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 242 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 300
Query: 801 L 801
Sbjct: 301 F 301

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 48/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 22  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFL------FGN----LKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L++ E +  G L S+L        N      PS +    +A +IA G+
Sbjct: 82  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 193
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 238
Query: 748 -LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVSL 801
            L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS 
Sbjct: 239 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 297

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 50/301 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 202
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 247
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 248 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306
Query: 801 L 801
Sbjct: 307 F 307

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 189
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 234
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 235 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 293

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 7   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 62
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 63  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 123 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y            
Sbjct: 180 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------------ 226
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
                +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 227 -----ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 4   PNYDKWEMERTDITMKHKLGGGQYGEVYEGV---WKKYSLTVAVKTLKEDTMEVE-EFLK 59
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 60  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 177 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 231
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 232 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 35/284 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E +G+G FG   + + +T R +   + +K+L R  ++ ++ F  EV V+    H N+++ 
Sbjct: 16  EVLGKGCFG---QAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           +G   + +    + E++  GTL   +   + +  W+ R + A  IA G+ YLH   S  I
Sbjct: 73  IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS------------KAIRTAIRGTKGYV 691
           IH D+   N L+ +  N  ++DFGLA+L+   ++            +  R  + G   ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-DWAFDCYRNEKLDD 750
           APE     +   KVDV+SFG++L EII       +    +Y   T D+  +         
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIG-----RVNADPDYLPRTMDFGLN--------- 235
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            V G ++      C      +++ C   DP  RP+  K+   LE
Sbjct: 236 -VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 50/312 (16%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVV 571
           E+         E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  
Sbjct: 43  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNL 620
           V+ + +  ++VRLLG   +GQ  L++ E +  G L S+L  +L+           PS + 
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 161
Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
              +A +IA G+ YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYY 216
Query: 681 RTAIRGTKG-----YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           R   +G KG     +++PE  ++   T   DV+SFGV+L EI               A L
Sbjct: 217 R---KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATL 258
Query: 736 TDWAFDCYRNEK-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL---- 790
            +  +    NE+ L  ++EG +    D  C + L  +   C Q +P +RP+  +++    
Sbjct: 259 AEQPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
Query: 791 -QMLEGVVEVSL 801
            +M  G  EVS 
Sbjct: 318 EEMEPGFREVSF 329

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 149/301 (49%), Gaps = 50/301 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 23  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 83  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 193
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 238
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 239 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 297
Query: 801 L 801
Sbjct: 298 F 298

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 195
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 240
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 241 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 29/300 (9%)
Query: 503 TIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG 562
           +++ + P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + 
Sbjct: 2   SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEV 58
Query: 563 EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--L 620
           E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +
Sbjct: 59  E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
              +A QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A 
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 738
             A    K + APE    +  + K DV++FGVLL EI +   S    I++ + Y      
Sbjct: 175 AGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                      +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + +
Sbjct: 228 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 195
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 240
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L  +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 241 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 60
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 61  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 178 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 232
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 233 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 29/300 (9%)
Query: 503 TIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG 562
           +++ + P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + 
Sbjct: 2   SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEV 58
Query: 563 EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--L 620
           E EF  E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +
Sbjct: 59  E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
              +A QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A 
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDW 738
             A    K + APE    +  + K DV++FGVLL EI +   S    I++ + Y      
Sbjct: 175 AGAKFPIK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ 227
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                      +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + +
Sbjct: 228 -----------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 4   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 59
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 60  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 177 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 231
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 232 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y            
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------------ 222
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
                +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 223 -----ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 60
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 61  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 178 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 232
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 233 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 5   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 60
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 61  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 178 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 232
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 233 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 25/288 (8%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+E      K ++G G FG VY+GV    +  +  VAVK L     + E EF  E  V+ 
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A QI+  +
Sbjct: 63  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A    K + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE    +  + K DV++FGVLL EI +   S                +      ++ +L+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELL 223
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 224 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 16  PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 71
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 72  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 132 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 189 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 243
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 244 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 25  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 85  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H ++  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 196
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 241
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P++RPT  +++ +L+  +  S P
Sbjct: 242 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 296

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G FG V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 60  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ E      IH +++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 119 AFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTA 174
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     T T K DV+SFG+LL EI++  +         Y  +T+        E + +L 
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQNLE 220
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            G      D  C E+L  +   C +E P  RPT   +  +LE
Sbjct: 221 RGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 230
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 231 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 230
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 231 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGV---WKKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 230
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 231 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+G    +    + T VAVK ++      E+ EF NE  V+      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF----------GNLKPSWNLRTNIAFQIARGL 632
           RLLG   +GQ  L+V E + +G L S+L           G   P+      +A +IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG--- 689
            YL+   + + +H ++  +N ++   +  +I DFG+ +   + ++   R   +G KG   
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR---KGGKGLLP 195
Query: 690 --YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++APE  ++   T   D++SFGV+L EI S               L +  +    NE+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           +   V           C E++  +   C Q +P++RPT  +++ +L+  +  S P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 25/288 (8%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  E  V+ 
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGV---WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A QI+  +
Sbjct: 63  EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A    K + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-WTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE    +  + K DV++FGVLL EI +   S                +      ++ +L+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELL 223
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 224 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y +L       YR
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----KDYR 230
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+ +              C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 231 MERPEG-------------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 50/300 (16%)
Query: 526 EVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLV 582
           E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  ++V
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-----------PSWNLRTNIAFQIARG 631
           RLLG   +GQ  L++ E +  G L S+L  +L+           PS +    +A +IA G
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-- 689
           + YL+ +   + +H D+  +N  + + +  +I DFG+ +   + ++   R   +G KG  
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYR---KGGKGLL 189
Query: 690 ---YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +++PE  ++   T   DV+SFGV+L EI               A L +  +    NE
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNE 234
Query: 747 K-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL-----QMLEGVVEVS 800
           + L  ++EG +    D  C + L+ +   C Q +P +RP+  +++     +M  G  EVS
Sbjct: 235 QVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 293

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P +   E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  
Sbjct: 3   PNYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLK 58
Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
           E  V+ +  H NLV+LLG C       ++ EF+  G L  +L    +   N  +   +A 
Sbjct: 59  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI+  + YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A   
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 744
            K + APE    +  + K DV++FGVLL EI +   S    I++ + Y            
Sbjct: 176 IK-WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------------ 222
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E
Sbjct: 223 -----ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 25/288 (8%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+E      K ++G G +G VY+GV    +  +  VAVK L     + E EF  E  V+ 
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A QI+  +
Sbjct: 63  EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A    K + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK-WTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE    +  + K DV++FGVLL EI +   S                +      ++ +L+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGIDPSQVYELL 223
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 224 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 36/299 (12%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   T    E +G G  G V+ G         T VAVK L +     +  F  E  ++ 
Sbjct: 9   EVPRETLKLVERLGAGQAGEVWMGYY----NGHTKVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           Q  H+ LVRL     + +   ++ E++ NG+L  FL     +K + N   ++A QIA G+
Sbjct: 64  QLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---G 689
            ++ E      IH D++  NIL+ D  + +I+DFGLA+L+      A  TA  G K    
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDAEXTAREGAKFPIK 175
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           + APE     T T K DV+SFG+LL EI++  +         Y  +T+        E + 
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-------PYPGMTN-------PEVIQ 221
Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT---MKKVLQMLEGVVEVSLPPNP 805
           +L  G      D  C E+L  +   C +E P  RPT   ++ VL+      E    P P
Sbjct: 222 NLERGYRMVRPD-NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 44/304 (14%)
Query: 505 ETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE- 563
           ++ LP  +  E+E     +++++G+G FG+V+KG ++  +   + VA+K L     +GE 
Sbjct: 10  KSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGET 61
Query: 564 ------KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP- 616
                 +EF+ EV ++   +H N+V+L G         +V EF+  G L   L     P 
Sbjct: 62  EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI 119
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-----ARISDFGLAKL 671
            W+++  +   IA G+ Y+ ++ +  I+H D++  NI L          A+++DFGL++ 
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ- 177
Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWF--RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
               QS    + + G   ++APE       + T K D YSF ++L  I++    FD    
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---- 229
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            EY+       +  R E L   +  D        C  +L  V   C   DP  RP    +
Sbjct: 230 -EYSYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 790 LQML 793
           ++ L
Sbjct: 281 VKEL 284

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 13  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 11  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 68  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 120
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD 207

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G++G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGLA++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    ++ +G G FG V  G +         VA+K L   + + ++ +F +E  +
Sbjct: 28  KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   +    +++ EF+ NG+L SFL  N      ++   +   IA G
Sbjct: 88  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL        +H D+  +NIL++     ++SDFGL++ L  + S    T+  G K   
Sbjct: 148 MKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE  +    T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 205 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDM---TNQDV 249
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
            + +E D      + C   L  + + C Q+D + RP   +++  L+ ++
Sbjct: 250 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 44/304 (14%)
Query: 505 ETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE- 563
           ++ LP  +  E+E     +++++G+G FG+V+KG ++  +   + VA+K L     +GE 
Sbjct: 10  KSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGET 61
Query: 564 ------KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP- 616
                 +EF+ EV ++   +H N+V+L G         +V EF+  G L   L     P 
Sbjct: 62  EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI 119
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-----ARISDFGLAKL 671
            W+++  +   IA G+ Y+ ++ +  I+H D++  NI L          A+++DFG    
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---- 174
Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWF--RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
            T  QS    + + G   ++APE       + T K D YSF ++L  I++    FD    
Sbjct: 175 -TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---- 229
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            EY+       +  R E L   +  D        C  +L  V   C   DP  RP    +
Sbjct: 230 -EYSYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 790 LQML 793
           ++ L
Sbjct: 281 VKEL 284

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 28  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 88  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 143
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 144 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 197
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 243
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 244 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 226
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 227 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 38  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 98  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 153
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 154 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 207
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 253
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 254 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 307

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL ++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G G+ G V   V    R +  AVAVK +D +   D  +  K E+ +    +H+N+V+
Sbjct: 12  QTLGEGAAGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDC 639
             G   EG  + L  E+ + G L    F  ++P   +    A     Q+  G++YLH   
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +  
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 700 TITAK-VDVYSFGVLLLEIISCRKSFD 725
              A+ VDV+S G++L  +++    +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 44/304 (14%)
Query: 505 ETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE- 563
           ++ LP  +  E+E     +++++G+G FG+V+KG ++  +   + VA+K L     +GE 
Sbjct: 10  KSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGET 61
Query: 564 ------KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP- 616
                 +EF+ EV ++   +H N+V+L G         +V EF+  G L   L     P 
Sbjct: 62  EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI 119
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-----ARISDFGLAKL 671
            W+++  +   IA G+ Y+ ++ +  I+H D++  NI L          A+++DF L++ 
Sbjct: 120 KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ- 177
Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWF--RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
               QS    + + G   ++APE       + T K D YSF ++L  I++    FD    
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD---- 229
Query: 730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            EY+       +  R E L   +  D        C  +L  V   C   DP  RP    +
Sbjct: 230 -EYSYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 790 LQML 793
           ++ L
Sbjct: 281 VKEL 284

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 3   EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 58  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 117 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 172
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 173 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 217
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 218 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 35/294 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E + NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL  D  A  +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYL-SDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S            Y     W     
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS------------YGERPYWEMS-- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 5   EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 60  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 118
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 119 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 174
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 219
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 220 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E + NG+L SFL      F  ++    LR     
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 156 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 255
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 256 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 518 EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGE-KEFKNEVVV 572
           E  ++FK    +G+GSF  VY+   + T      VA+K +D+  +++ G  +  +NEV +
Sbjct: 8   EKIEDFKVGNLLGKGSFAGVYRAESIHT---GLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARG 631
             Q  H +++ L  + ++     LV E  +NG +  +L   +KP S N   +   QI  G
Sbjct: 65  HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +LYLH   S  I+H D+   N+LL    N +I+DFGLA  L +   K     + GT  Y+
Sbjct: 125 MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYI 179
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNEKL 748
           +PE    S    + DV+S G +   ++  R  FD +  +      +L D+    + + + 
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA 239
Query: 749 DDLVE 753
            DL+ 
Sbjct: 240 KDLIH 244

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + R     E++F  E  V+ +  H  L
Sbjct: 10  TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV+EF+ +G L+ +L     L  +  L   +   +  G+ YL E C
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 123
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
              +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVF 176
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
             S  ++K DV+SFGVL+ E+ S  K                    Y N    ++VE   
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKI------------------PYENRSNSEVVEDIS 218
Query: 757 EALNDIKCVEKLVMVSIW-----CIQEDPSLRPTMKKVLQMLEGVVEVSL 801
                 K   +L    ++     C +E P  RP   ++L+ L  + E  L
Sbjct: 219 TGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + R     E++F  E  V+ +  H  L
Sbjct: 13  TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV+EF+ +G L+ +L     L  +  L   +   +  G+ YL E C
Sbjct: 68  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 126
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
              +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 127 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVF 179
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
             S  ++K DV+SFGVL+ E+ S  K                    Y N    ++VE   
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKI------------------PYENRSNSEVVEDIS 221
Query: 757 EALNDIKCVEKLVMVSIW-----CIQEDPSLRPTMKKVLQMLEGVVEVSL 801
                 K   +L    ++     C +E P  RP   ++L+ L  + E  L
Sbjct: 222 TGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  ++V E + NG+L SFL      F  ++    LR     
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + +PE       T+  DV+S+G++L E++S  +    EM               
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------------- 226
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N+ +   V+        + C   L  + + C Q+D + RP  ++++ +L+ ++ 
Sbjct: 227 -NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----S 617
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL     P    S
Sbjct: 93  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 618 WNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
           +N   N             + Q+A+G+ +L    S   IH D+  +N+LL + + A+I D
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 209
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           FGLA+ +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI      F 
Sbjct: 210 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FS 263
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           + +     IL         N K   LV+   +        + +  +   C   +P+ RPT
Sbjct: 264 LGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 315
Query: 786 MKKVLQMLE 794
            +++   L+
Sbjct: 316 FQQICSFLQ 324

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + R     E++F  E  V+ +  H  L
Sbjct: 8   TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV+EF+ +G L+ +L     L  +  L   +   +  G+ YL E C
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
              +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVF 174
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
             S  ++K DV+SFGVL+ E+ S  K                    Y N    ++VE   
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKI------------------PYENRSNSEVVEDIS 216
Query: 757 EALNDIKCVEKLVMVSIW-----CIQEDPSLRPTMKKVLQMLEGVVEVSL 801
                 K   +L    ++     C +E P  RP   ++L+ L  + E  L
Sbjct: 217 TGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    ++ +G G FG V  G +         VA+K L   + + ++ +F +E  +
Sbjct: 2   KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   +    +++ EF+ NG+L SFL  N      ++   +   IA G
Sbjct: 62  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL +      +H  +  +NIL++     ++SDFGL++ L  + S    T+  G K   
Sbjct: 122 MKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE  +    T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMT---NQDV 223
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            + +E D      + C   L  + + C Q+D + RP   +++  L+ ++ 
Sbjct: 224 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 35/307 (11%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR 621
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL    + S  L 
Sbjct: 93  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLE 149
Query: 622 TNIAFQIA------RGLLYLHED--------CSAQIIHCDIKPQNILLDDYYNARISDFG 667
           T+ AF IA      R LL+             S   IH D+  +N+LL + + A+I DFG
Sbjct: 150 TDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209
Query: 668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE 727
           LA+ +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI      F + 
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLG 263
Query: 728 MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMK 787
           +     IL         N K   LV+   +        + +  +   C   +P+ RPT +
Sbjct: 264 LNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 788 KVLQMLE 794
           ++   L+
Sbjct: 316 QICSFLQ 322

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 14  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 68
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 69  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D+   NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 128 AYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 183
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 228
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 35/307 (11%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR 621
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL    + S  L 
Sbjct: 93  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLE 149
Query: 622 TNIAFQIA------RGLLYLHED--------CSAQIIHCDIKPQNILLDDYYNARISDFG 667
           T+ AF IA      R LL+             S   IH D+  +N+LL + + A+I DFG
Sbjct: 150 TDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209
Query: 668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE 727
           LA+ +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI      F + 
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLG 263
Query: 728 MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMK 787
           +     IL         N K   LV+   +        + +  +   C   +P+ RPT +
Sbjct: 264 LNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315
Query: 788 KVLQMLE 794
           ++   L+
Sbjct: 316 QICSFLQ 322

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 317
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 318 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 376
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 377 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 432
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 477
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMK 235
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G +     L    ++A QIA G+
Sbjct: 236 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 294
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGL +L+  N+  A R   +    + A
Sbjct: 295 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTA-RQGAKFPIKWTA 350
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 351 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 395
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C ++DP  RPT + +   LE
Sbjct: 396 ERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 31/303 (10%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 25  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 84
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN-- 619
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL    +   +  
Sbjct: 85  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 620 ------LRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
                 LR  + F  Q+A+G+ +L    S   IH D+  +N+LL + + A+I DFGLA+ 
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 201
Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI      F + +   
Sbjct: 202 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPY 255
Query: 732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             IL         N K   LV+   +        + +  +   C   +P+ RPT +++  
Sbjct: 256 PGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 307
Query: 792 MLE 794
            L+
Sbjct: 308 FLQ 310

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 31/303 (10%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN-- 619
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL    +   +  
Sbjct: 93  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 620 ------LRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
                 LR  + F  Q+A+G+ +L    S   IH D+  +N+LL + + A+I DFGLA+ 
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 209
Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI      F + +   
Sbjct: 210 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPY 263
Query: 732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             IL         N K   LV+   +        + +  +   C   +P+ RPT +++  
Sbjct: 264 PGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 315
Query: 792 MLE 794
            L+
Sbjct: 316 FLQ 318

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V+ +  E +F  E 
Sbjct: 40  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEA 99
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 320 DPDVINTALP 329

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    ++ +G G FG V  G +         VA+K L   + D ++ +F +E  +
Sbjct: 24  KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   + +  +++ E++ NG+L +FL  N      ++   +   I  G
Sbjct: 84  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL  D SA  +H D+  +NIL++     ++SDFG++++L  +   A  T  RG K   
Sbjct: 144 MKYL-SDMSA--VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 198
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE       T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 243
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              +E        + C   L  + + C Q++ S RP   +++ ML+ ++
Sbjct: 244 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 25/289 (8%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE+E +    +  +G G FG V  G +         VA+K L   + + ++ +F  E  +
Sbjct: 17  KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   + +  ++V E++ NG+L +FL  N      ++   +   I+ G
Sbjct: 77  MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL +      +H D+  +NIL++     ++SDFGL+++L  +   A  T  RG K   
Sbjct: 137 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIPI 191
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE       T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVS------------YGERPYWEMT---NQDV 236
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              VE      + + C   L  + + C Q++ + RP   +++ ML+ ++
Sbjct: 237 IKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 33/293 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+ +    +  +G G FG V  G +        AVA+K L   + + ++ +F  E  +
Sbjct: 38  KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N+V L G    G+  ++V EF+ NG L +FL      F  ++    LR     
Sbjct: 98  MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG---- 153
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL        +H D+  +NIL++     ++SDFGL++++  +  +A+ T   G
Sbjct: 154 -IAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGG 208
Query: 687 T--KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
                + APE  +    T+  DV+S+G+++ E++S            Y     W      
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS--- 253
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
           N+ +   +E        + C   L  + + C Q++ + RP  ++++ +L+ ++
Sbjct: 254 NQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 50/302 (16%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           E+  +    ++ +G G FG VYKG++ T+       VA+K L   + + ++ +F  E  +
Sbjct: 40  EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G   + +  +++ E++ NG L  FL      F  L+    LR     
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG---- 155
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            IA G+ YL    +   +H D+  +NIL++     ++SDFGL+++L  +      T+  G
Sbjct: 156 -IAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS--G 209
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + APE       T+  DV+SFG+++ E+++            Y     W    +
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT------------YGERPYWELSNH 257
Query: 744 RNEKLDDLVEGDMEALND-------IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
                       M+A+ND       + C   +  + + C Q++ + RP    ++ +L+ +
Sbjct: 258 EV----------MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
Query: 797 VE 798
           + 
Sbjct: 308 IR 309

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 89.7 bits (221), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 43/290 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + R     E++F  E  V+ +  H  L
Sbjct: 11  TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV EF+ +G L+ +L     L  +  L   +   +  G+ YL E C
Sbjct: 66  VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 124
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
              +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 125 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY----TSSTGTKFPVKWASPEVF 177
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
             S  ++K DV+SFGVL+ E+ S  K                    Y N    ++VE   
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKI------------------PYENRSNSEVVEDIS 219
Query: 757 EALNDIKCVEKLVMVSIW-----CIQEDPSLRPTMKKVLQMLEGVVEVSL 801
                 K   +L    ++     C +E P  RP   ++L+ L  + E  L
Sbjct: 220 TGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 65
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E++N G+L  FL G       L    +++ QIA G+
Sbjct: 66  KLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 125 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 180
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 225
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 18/203 (8%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + R     E++F  E  V+ +  H  L
Sbjct: 10  TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV+EF+ +G L+ +L     L  +  L   +   +  G+ YL E  
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE-- 121
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
            A +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 122 -ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVF 176
Query: 697 RNSTITAKVDVYSFGVLLLEIIS 719
             S  ++K DV+SFGVL+ E+ S
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFS 199

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 4   EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 59  KLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 117
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 118 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA-RQGAKFPIKWTA 173
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 174 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 218
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 219 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 11  EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 65
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E++N G+L  FL G       L    +++ QIA G+
Sbjct: 66  KLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 125 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTA-RQGAKFPIKWTA 180
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 225
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 43/290 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L    +   VA+K + +     E +F  E  V+ +  H  L
Sbjct: 30  TFVQEIGSGQFGLVHLGYWL----NKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKL 84
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L G C E     LV+EF+ +G L+ +L     L  +  L   +   +  G+ YL E C
Sbjct: 85  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC 143
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAPEWF 696
              +IH D+  +N L+ +    ++SDFG+ + +  +Q     T+  GTK    + +PE F
Sbjct: 144 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVF 196
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
             S  ++K DV+SFGVL+ E+ S  K                    Y N    ++VE   
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKI------------------PYENRSNSEVVEDIS 238
Query: 757 EALNDIKCVEKLVMVSIW-----CIQEDPSLRPTMKKVLQMLEGVVEVSL 801
                 K   +L    ++     C +E P  RP   ++L+ L  + E  L
Sbjct: 239 TGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 234
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 235 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 294 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 349
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 394
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 234
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 235 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 294 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 349
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 394
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 30/270 (11%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLV 582
           +G G FG V+KGV I    +    V +K ++   + G + F+   + ++ IG   H ++V
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           RLLG C  G +  LV ++L  G+L   +    G L P   L  N   QIA+G+ YL E  
Sbjct: 97  RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP--QLLLNWGVQIAKGMYYLEEHG 153
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              ++H ++  +N+LL      +++DFG+A LL  +  + + +  +    ++A E     
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
             T + DV+S+GV + E+++          E YA L        R  ++ DL+E      
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFG-------AEPYAGL--------RLAEVPDLLEKGERLA 255
Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
               C   + MV + C   D ++RPT K++
Sbjct: 256 QPQICTIDVYMVMVKCWMIDENIRPTFKEL 285

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ +    T    VA+K L+         EF +E +++    H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           LG C     +L V + + +G L  ++  +       L  N   QIA+G++YL E    ++
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 161
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H D+  +N+L+    + +I+DFGLA+LL  ++ +      +    ++A E       T 
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK 763
           + DV+S+GV + E+++                    +D     ++ DL+E          
Sbjct: 222 QSDVWSYGVTIWELMT---------------FGGKPYDGIPTREIPDLLEKGERLPQPPI 266
Query: 764 CVEKLVMVSIWCIQEDPSLRPTMKKV 789
           C   + MV + C   D   RP  K++
Sbjct: 267 CTIDVYMVMVKCWMIDADSRPKFKEL 292

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ +    T    VA+K L+         EF +E +++    H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           LG C     +L V + + +G L  ++  +       L  N   QIA+G++YL E    ++
Sbjct: 83  LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 138
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H D+  +N+L+    + +I+DFGLA+LL  ++ +      +    ++A E       T 
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIK 763
           + DV+S+GV + E+++         G+ Y        D     ++ DL+E          
Sbjct: 199 QSDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLEKGERLPQPPI 243
Query: 764 CVEKLVMVSIWCIQEDPSLRPTMKKV 789
           C   + MV + C   D   RP  K++
Sbjct: 244 CTIDVYMVMVKCWMIDADSRPKFKEL 269

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 30/270 (11%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLV 582
           +G G FG V+KGV I    +    V +K ++   + G + F+   + ++ IG   H ++V
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           RLLG C  G +  LV ++L  G+L   +    G L P   L  N   QIA+G+ YL E  
Sbjct: 79  RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP--QLLLNWGVQIAKGMYYLEEHG 135
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              ++H ++  +N+LL      +++DFG+A LL  +  + + +  +    ++A E     
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
             T + DV+S+GV + E+++          E YA L        R  ++ DL+E      
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFG-------AEPYAGL--------RLAEVPDLLEKGERLA 237
Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
               C   + MV + C   D ++RPT K++
Sbjct: 238 QPQICTIDVYMVMVKCWMIDENIRPTFKEL 267

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 7   EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 61
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 62  KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 120
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 121 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 176
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 221
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 222 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVR 583
           E++GRG+FG V+ G +   R   T VAVK        D + +F  E  ++ Q  H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRL---RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI----ARGLLYLHEDC 639
           L+G C + Q   +V E +  G   +FL         LR     Q+    A G+ YL   C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK----GYVAPEW 695
               IH D+  +N L+ +    +ISDFG+++     ++  +  A  G +     + APE 
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
                 +++ DV+SFG+LL E  S   S                +    N++  + VE  
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
                   C + +  +   C   +P  RP+   + Q L+ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   + ++G+G FG V+ G    T   TT VA+K L       E  F  E  V+ 
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMK 234
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H+ LV+L     E +   +V E+++ G+L  FL G       L    ++A QIA G+
Sbjct: 235 KLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   +    + A
Sbjct: 294 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTA 349
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+ +  +                 +    N ++ D V
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQV 394
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E         +C E L  +   C +++P  RPT + +   LE
Sbjct: 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 48/299 (16%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKN 580
            F++ +G G+FG V K  I        A   +  +   +D  ++F  E+ V+ +  HH N
Sbjct: 18  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA----------- 629
           ++ LLG C+      L  E+  +G L  FL    + S  L T+ AF IA           
Sbjct: 78  IINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 630 ---------RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
                    RG+ YL +    Q IH D+  +NIL+ + Y A+I+DFGL++   +   K +
Sbjct: 134 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 681 -RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
            R  +R    ++A E    S  T   DV+S+GVLL EI+S   +     G   A L +  
Sbjct: 191 GRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT--PYCGMTCAELYEKL 244
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
              YR EK              + C +++  +   C +E P  RP+  ++L  L  ++E
Sbjct: 245 PQGYRLEK-------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 48/299 (16%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKN 580
            F++ +G G+FG V K  I        A   +  +   +D  ++F  E+ V+ +  HH N
Sbjct: 28  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA----------- 629
           ++ LLG C+      L  E+  +G L  FL    + S  L T+ AF IA           
Sbjct: 88  IINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 630 ---------RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
                    RG+ YL +    Q IH D+  +NIL+ + Y A+I+DFGL++   +   K +
Sbjct: 144 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 681 -RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
            R  +R    ++A E    S  T   DV+S+GVLL EI+S   +     G   A L +  
Sbjct: 201 GRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT--PYCGMTCAELYEKL 254
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
              YR EK              + C +++  +   C +E P  RP+  ++L  L  ++E
Sbjct: 255 PQGYRLEK-------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 40  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 320 DPDVINTALP 329

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 40  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 320 DPDVINTALP 329

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVR 583
           E++GRG+FG V+ G +   R   T VAVK        D + +F  E  ++ Q  H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRL---RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI----ARGLLYLHEDC 639
           L+G C + Q   +V E +  G   +FL         LR     Q+    A G+ YL   C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK----GYVAPEW 695
               IH D+  +N L+ +    +ISDFG+++     ++  +  A  G +     + APE 
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
                 +++ DV+SFG+LL E  S   S                +    N++  + VE  
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
                   C + +  +   C   +P  RP+   + Q L+ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           +E+E +  + ++ +G G  G V  G +         VA+K L   + + ++ +F +E  +
Sbjct: 44  REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G    G+  ++V E++ NG+L +FL      F  ++    LR     
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG---- 159
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            +  G+ YL +      +H D+  +N+L+D     ++SDFGL+++L  +   A  T   G
Sbjct: 160 -VGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT--G 213
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + APE     T ++  DV+SFGV++ E+++            Y     W     
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERPYWNMT-- 259
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N  +   VE        + C   L  + + C  +D + RP   +++ +L+ ++ 
Sbjct: 260 -NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 45/298 (15%)
Query: 527 VGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVR 583
           +G G FG V K     L  R   T VAVK L       E ++  +E  V+ Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-------------------PSWNLRT-- 622
           L G C +    LL+ E+   G+L  FL  + K                   P     T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 623 ---NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
              + A+QI++G+ YL E    +++H D+  +NIL+ +    +ISDFGL++ +    S  
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
            R+  R    ++A E   +   T + DV+SFGVLL EI++         G  Y  +    
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPP-- 258
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                 E+L +L++          C E++  + + C +++P  RP    + + LE ++
Sbjct: 259 ------ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           +E+E +  + ++ +G G  G V  G +         VA+K L   + + ++ +F +E  +
Sbjct: 44  REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNIAF 626
           +GQ  H N++RL G    G+  ++V E++ NG+L +FL      F  ++    LR     
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG---- 159
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            +  G+ YL +      +H D+  +N+L+D     ++SDFGL+++L  +   A  T   G
Sbjct: 160 -VGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT--G 213
Query: 687 TK---GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
            K    + APE     T ++  DV+SFGV++ E+++            Y     W     
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERPYWNMT-- 259
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            N  +   VE        + C   L  + + C  +D + RP   +++ +L+ ++ 
Sbjct: 260 -NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 25/290 (8%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    ++ +G G FG V  G +         VA+K L   + D ++ +F +E  +
Sbjct: 3   KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   + +  +++ E++ NG+L +FL  N      ++   +   I  G
Sbjct: 63  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL +      +H D+  +NIL++     ++SDFG++++L  +   A  T  RG K   
Sbjct: 123 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 177
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE       T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 222
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
              +E        + C   L  + + C Q++ S RP   +++ ML+ ++ 
Sbjct: 223 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 272

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 25/289 (8%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KE++ +    ++ +G G FG V  G +         VA+K L   + D ++ +F +E  +
Sbjct: 9   KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARG 631
           +GQ  H N++ L G   + +  +++ E++ NG+L +FL  N      ++   +   I  G
Sbjct: 69  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK--- 688
           + YL +      +H D+  +NIL++     ++SDFG++++L  +   A  T  RG K   
Sbjct: 129 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 183
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            + APE       T+  DV+S+G+++ E++S            Y     W      N+ +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 228
Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
              +E        + C   L  + + C Q++ S RP   +++ ML+ ++
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 41/301 (13%)
Query: 522 NFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           N  + +GRG+FG V +    G+  T    T AV + K      +         ++I   H
Sbjct: 31  NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 578 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFL------FGNLKPSWNLRTNI------ 624
           H N+V LLG C + G   +++ EF   G L+++L      F   K   +L  +       
Sbjct: 91  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 625 ---AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
              +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWA 739
              R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+       
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------- 260
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV 799
             C R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ 
Sbjct: 261 --CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 800 S 800
           +
Sbjct: 312 N 312

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 17  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 76
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 77  LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 135
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 136 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 193 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 236
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 237 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 296
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 297 DPDVINTALP 306

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 29/284 (10%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+E      K ++G G +G VY GV    +  +  VAVK L     + E EF  E  V+ 
Sbjct: 28  EMERTDITMKHKLGGGQYGEVYVGVW---KKYSLTVAVKTLKEDTMEVE-EFLKEAAVMK 83
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGL 632
           +  H NLV+LLG C       +V E++  G L  +L      + +  +   +A QI+  +
Sbjct: 84  EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL +      IH D+  +N L+ + +  +++DFGL++L+T +   A   A    K + A
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK-WTA 199
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNEKLDD 750
           PE    +T + K DV++FGVLL EI +   S    I++ + Y +L       YR E+ + 
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLE----KGYRMEQPEG 255
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                        C  K+  +   C +  P+ RP+  +  Q  E
Sbjct: 256 -------------CPPKVYELMRACWKWSPADRPSFAETHQAFE 286

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L    +   ++F+ E  ++    H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 624
           +VR  G C EG+  L+V+E++ +G L  FL  +  P   L                   +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A Q+A G++YL        +H D+  +N L+      +I DFG+++ +       +    
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
                ++ PE       T + DV+SFGV+L EI +  K               W +    
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-------------PW-YQLSN 266
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
            E +D + +G  E      C  ++  +   C Q +P  R ++K V   L+ + +   PP
Sbjct: 267 TEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA--PP 322

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 25  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 85  LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 143
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 201 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 244
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 305 DPDVINTALP 314

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 25  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 85  LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 143
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 201 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 244
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 305 DPDVINTALP 314

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 33/295 (11%)
Query: 517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQ 575
           E    +    +G+G FG+VY G  +    +    A+K L R+ +  + E F  E +++  
Sbjct: 19  ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 576 THHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGL 632
            +H N++ L+G     EG   +L+  ++ +G L  F+    + P+     +   Q+ARG+
Sbjct: 79  LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGM 137
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL------TLNQSKAIRTAIRG 686
            YL E    + +H D+  +N +LD+ +  +++DFGLA+ +      ++ Q +  R  ++ 
Sbjct: 138 EYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
           T    A E  +    T K DV+SFGVLL E+++            Y  +  +    +   
Sbjct: 195 T----ALESLQTYRFTTKSDVWSFGVLLWELLT-------RGAPPYRHIDPFDLTHF--- 240
Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL 801
               L +G      +  C + L  V   C + DP++RPT + ++  +E +V   L
Sbjct: 241 ----LAQGRRLPQPEY-CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 45/298 (15%)
Query: 527 VGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVR 583
           +G G FG V K     L  R   T VAVK L       E ++  +E  V+ Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-------------------PSWNLRT-- 622
           L G C +    LL+ E+   G+L  FL  + K                   P     T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 623 ---NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
              + A+QI++G+ YL E    +++H D+  +NIL+ +    +ISDFGL++ +    S  
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
            R+  R    ++A E   +   T + DV+SFGVLL EI++         G  Y  +    
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPP-- 258
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                 E+L +L++          C E++  + + C +++P  RP    + + LE ++
Sbjct: 259 ------ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 26  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 86  LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 306 DPDVINTALP 315

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 572
           + EL+       +E+G G FG+V  G           VAVK + +     E EF  E   
Sbjct: 2   HMELKREEITLLKELGSGQFGVVKLG----KWKGQYDVAVKMI-KEGSMSEDEFFQEAQT 56
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIA 629
           + +  H  LV+  G C +     +V E+++NG L ++L  +   L+PS  L   + + + 
Sbjct: 57  MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVC 114
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK- 688
            G+ +L    S Q IH D+  +N L+D     ++SDFG+ + +  +Q      +  GTK 
Sbjct: 115 EGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ----YVSSVGTKF 167
Query: 689 --GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK-SFDIEMGEEYAILTDWAFDCYRN 745
              + APE F     ++K DV++FG+L+ E+ S  K  +D+    E  +        YR 
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP 227
Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
               D +                +M S W   E P  RPT +++L  +E + E
Sbjct: 228 HLASDTIYQ--------------IMYSCW--HELPEKRPTFQQLLSSIEPLRE 264

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 33/293 (11%)
Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L     +  K+F  E  ++    H++
Sbjct: 17  LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-----LKPSWNLRT--------NIAFQ 627
           +V+  G C EG   ++V+E++ +G L  FL  +     L    N  T        +IA Q
Sbjct: 77  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           IA G++YL    S   +H D+  +N L+ +    +I DFG+++ +       +       
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             ++ PE       T + DV+S GV+L EI +  K               W +    NE 
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ-------------PW-YQLSNNEV 239
Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           ++ + +G +       C +++  + + C Q +P +R  +K +  +L+ + + S
Sbjct: 240 IECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E       F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 18  TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 77
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPS 617
           KE   +E+ ++     H+N+V LLG C  G   L++ E+   G L +FL       L PS
Sbjct: 78  KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 618 W-----------------NLRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDY 658
                              LR  + F  Q+A+G+ +L    S   IH D+  +N+LL + 
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 194
Query: 659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
           + A+I DFGLA+ +  + +  ++   R    ++APE   +   T + DV+S+G+LL EI 
Sbjct: 195 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI- 253
Query: 719 SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQE 778
                F + +     IL         N K   LV+   +        + +  +   C   
Sbjct: 254 -----FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 300
Query: 779 DPSLRPTMKKVLQMLE 794
           +P+ RPT +++   L+
Sbjct: 301 EPTHRPTFQQICSFLQ 316

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 40/295 (13%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFL------FGNLKP--------SWNLRTNIAFQ 627
            LLG C + G   +++ EF   G L+++L      F   KP        +       +FQ
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           +A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R  
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRN 745
             ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C R 
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR- 263
Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
                L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 264 -----LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 26  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 86  LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 306 DPDVINTALP 315

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 45/298 (15%)
Query: 527 VGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVR 583
           +G G FG V K     L  R   T VAVK L       E ++  +E  V+ Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK-------------------PSWNLRT-- 622
           L G C +    LL+ E+   G+L  FL  + K                   P     T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 623 ---NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
              + A+QI++G+ YL E     ++H D+  +NIL+ +    +ISDFGL++ +    S  
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 739
            R+  R    ++A E   +   T + DV+SFGVLL EI++         G  Y  +    
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPP-- 258
Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                 E+L +L++          C E++  + + C +++P  RP    + + LE ++
Sbjct: 259 ------ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 66  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 125
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 184
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +      +
Sbjct: 185 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 242 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 285
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 286 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 346 DPDVINTALP 355

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 57/326 (17%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           ++N+P D TI    P   + +++     F++ +G G+FG V K  I        A   + 
Sbjct: 7   VKNNP-DPTI---YPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 555 LDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN 613
            +   +D  ++F  E+ V+ +  HH N++ LLG C+      L  E+  +G L  FL   
Sbjct: 58  KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--- 114
Query: 614 LKPSWNLRTNIAFQIA--------------------RGLLYLHEDCSAQIIHCDIKPQNI 653
            + S  L T+ AF IA                    RG+ YL +    Q IH ++  +NI
Sbjct: 115 -RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNI 170
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           L+ + Y A+I+DFGL++   +   K + R  +R    ++A E    S  T   DV+S+GV
Sbjct: 171 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGV 226
Query: 713 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVS 772
           LL EI+S   +     G   A L +     YR EK              + C +++  + 
Sbjct: 227 LLWEIVSLGGT--PYCGMTCAELYEKLPQGYRLEK-------------PLNCDDEVYDLM 271
Query: 773 IWCIQEDPSLRPTMKKVLQMLEGVVE 798
             C +E P  RP+  ++L  L  ++E
Sbjct: 272 RQCWREKPYERPSFAQILVSLNRMLE 297

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 32  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 91
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 92  LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 150
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 151 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 208 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 251
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 252 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 311
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 312 DPDVINTALP 321

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 522 NFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           N  + +GRG+FG V +    G+  T    T AV + K      +         ++I   H
Sbjct: 30  NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 578 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNI--------- 624
           H N+V LLG C + G   +++ EF   G L+++L        P  +L  +          
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 257
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 258 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 132/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 43  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 102
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 161
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +      +
Sbjct: 162 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 219 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 262
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 263 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 322
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 323 DPDVINTALP 332

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 26  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 86  LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 306 DPDVINTALP 315

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 525 EEVGRGSFGIVY--KGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +++G G    VY  +  IL  + +  A+ +   ++  ++  K F+ EV    Q  H+N+V
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIV 74
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            ++   +E     LV E++   TL+ ++  +   S +   N   QI  G+ + H+    +
Sbjct: 75  SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MR 131
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H DIKPQNIL+D     +I DFG+AK L+   S      + GT  Y +PE  +     
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
              D+YS G++L E++     F+ E     AI
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 42  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 101
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 160
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 161 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 218 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 261
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 262 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 321
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 322 DPDVINTALP 331

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRL 584
           E+G G+FG V +GV    R     VA+K L +  +  + +E   E  ++ Q  +  +VRL
Sbjct: 17  ELGCGNFGSVRQGV-YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +G C + +  +LV E    G L  FL G  +  P  N+   +  Q++ G+ YL E     
Sbjct: 76  IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK---N 130
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTI 701
            +H D+  +N+LL + + A+ISDFGL+K L  + S    R+A +    + APE       
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 702 TAKVDVYSFGVLLLEIIS 719
           +++ DV+S+GV + E +S
Sbjct: 191 SSRSDVWSYGVTMWEALS 208

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L    +   ++F+ E  ++    H++
Sbjct: 16  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 624
           +VR  G C EG+  L+V+E++ +G L  FL  +  P   L                   +
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A Q+A G++YL        +H D+  +N L+      +I DFG+++ +       +    
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
                ++ PE       T + DV+SFGV+L EI +  K               W +    
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-------------PW-YQLSN 237
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
            E +D + +G  E      C  ++  +   C Q +P  R ++K V   L+ + +   PP
Sbjct: 238 TEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA--PP 293

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 39/302 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVIL--TTRTSTTAVAVKKL-DRVFQDGEKEFKNEV 570
           KE+  +   F EE+G   FG VYKG +        T AVA+K L D+      +EF++E 
Sbjct: 4   KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--------FGNLKPSWNLRT 622
           ++  +  H N+V LLG   + Q   +++ + ++G L  FL         G+      +++
Sbjct: 64  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 623 --------NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLT 673
                   ++  QIA G+ YL    S  ++H D+  +N+L+ D  N +ISD GL + +  
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 733
            +  K +  ++   + ++APE       +   D++S+GV+L E+ S            Y 
Sbjct: 181 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 227
Query: 734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
           +     +  Y N+ + +++           C   +  + I C  E PS RP  K +   L
Sbjct: 228 LQP---YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
Query: 794 EG 795
Sbjct: 285 RA 286

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L    +   ++F+ E  ++    H++
Sbjct: 22  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 624
           +VR  G C EG+  L+V+E++ +G L  FL  +  P   L                   +
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A Q+A G++YL        +H D+  +N L+      +I DFG+++ +       +    
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
                ++ PE       T + DV+SFGV+L EI +  K               W +    
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-------------PW-YQLSN 243
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
            E +D + +G  E      C  ++  +   C Q +P  R ++K V   L+ + +   PP
Sbjct: 244 TEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA--PP 299

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 41/310 (13%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVF-QDGEKEFKNEV 570
           KE+          +G G+FG VY+G +  +    S   VAVK L  V  +  E +F  E 
Sbjct: 52  KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---- 626
           ++I + +H+N+VR +G   +   R ++ E +  G L SFL    +P  +  +++A     
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 170
Query: 627 ----QIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAK-LLTLNQSK 678
                IA G  YL E+     IH DI  +N LL        A+I DFG+A+ +   +  +
Sbjct: 171 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 738
               A+   K ++ PE F     T+K D +SFGVLL EI S               L   
Sbjct: 228 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 271
Query: 739 AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE---- 794
            +    N+++ + V           C   +  +   C Q  P  RP    +L+ +E    
Sbjct: 272 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 331
Query: 795 --GVVEVSLP 802
              V+  +LP
Sbjct: 332 DPDVINTALP 341

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 39/302 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVIL--TTRTSTTAVAVKKL-DRVFQDGEKEFKNEV 570
           KE+  +   F EE+G   FG VYKG +        T AVA+K L D+      +EF++E 
Sbjct: 21  KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRT--- 622
           ++  +  H N+V LLG   + Q   +++ + ++G L  FL       ++  + + RT   
Sbjct: 81  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 623 --------NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LLT 673
                   ++  QIA G+ YL    S  ++H D+  +N+L+ D  N +ISD GL + +  
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 733
            +  K +  ++   + ++APE       +   D++S+GV+L E+ S            Y 
Sbjct: 198 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 244
Query: 734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
           +     +  Y N+ + +++           C   +  + I C  E PS RP  K +   L
Sbjct: 245 LQ---PYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
Query: 794 EG 795
Sbjct: 302 RA 303

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 135/323 (41%), Gaps = 40/323 (12%)
Query: 500 GDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVK 553
           G G  E  LP     EL        + +G G+FG V     +        R +  AV + 
Sbjct: 1   GAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 60
Query: 554 KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN 613
           K D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L   
Sbjct: 61  KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 120
Query: 614 LKP----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD 657
             P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +
Sbjct: 121 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTE 177
Query: 658 YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEI 717
               +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI
Sbjct: 178 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
Query: 718 ISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQ 777
            +   S                +     E+L  L++          C  +L M+   C  
Sbjct: 238 FTLGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWH 282
Query: 778 EDPSLRPTMKKVLQMLEGVVEVS 800
             PS RPT K++++ L+ +V ++
Sbjct: 283 AVPSQRPTFKQLVEDLDRIVALT 305

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 27/290 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +    + +G G FG V+ G    T    T VA+K L       E  F  E  ++ 
Sbjct: 5   EIPRESLQLIKRLGNGQFGEVWMG----TWNGNTKVAIKTLKPGTMSPES-FLEEAQIMK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGL 632
           +  H  LV+L     E +   +V E++N G+L  FL      +  L    ++A Q+A G+
Sbjct: 60  KLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        IH D++  NIL+ +    +I+DFGLA+L+  N+  A R   +    + A
Sbjct: 119 AYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTA-RQGAKFPIKWTA 174
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE       T K DV+SFG+LL E+++  +                 +    N ++ + V
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRV---------------PYPGMNNREVLEQV 219
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
           E          C   L  + I C ++DP  RPT + +   LE     + P
Sbjct: 220 ERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 522 NFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           N  + +GRG+FG V +    G+  T    T AV + K      +         ++I   H
Sbjct: 30  NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 578 HKNLVRLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNI--------- 624
           H N+V LLG C + G   +++ EF   G L+++L        P  +L  +          
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+          
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFX--------- 257
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
                   L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 258 ------RRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 10/198 (5%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRL 584
           E+G G+FG V +GV    R     VA+K L +  +  + +E   E  ++ Q  +  +VRL
Sbjct: 343 ELGCGNFGSVRQGVY-RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +G C + +  +LV E    G L  FL G  +  P  N+   +  Q++ G+ YL E     
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK---N 456
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTI 701
            +H ++  +N+LL + + A+ISDFGL+K L  + S    R+A +    + APE       
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 702 TAKVDVYSFGVLLLEIIS 719
           +++ DV+S+GV + E +S
Sbjct: 517 SSRSDVWSYGVTMWEALS 534

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 127/278 (45%), Gaps = 46/278 (16%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E +G+GSFG V+KG+    RT    VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 29  ERIGKGSFGEVFKGI--DNRTQQV-VAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             G   +G    ++ E+L  G+    L       + + T +  +I +GL YLH   S + 
Sbjct: 86  YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLH---SEKK 141
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIK  N+LL +  + +++DFG+A  LT  Q K  R    GT  ++APE  + S   +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAYDS 199
Query: 704 KVDVYSFGVLLLEIIS----------CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
           K D++S G+  +E+             R  F I       ++ D+       +   + ++
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDF------TKSFKEFID 253
Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                                C+ +DPS RPT K++L+
Sbjct: 254 A--------------------CLNKDPSFRPTAKELLK 271

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 52  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 111
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 112 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 171
Query: 616 P----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 228
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 289 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 333
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 334 PSQRPTFKQLVEDLDRIVALT 354

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 587
            RG FG V+K  +L    +     ++  D+  Q  + E+  EV  +    H+N+++ +G 
Sbjct: 33  ARGRFGCVWKAQLLNEYVAVKIFPIQ--DK--QSWQNEY--EVYSLPGMKHENILQFIGA 86
Query: 588 CDEGQ----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA-- 641
              G     +  L+  F   G+L+ FL  N+  SWN   +IA  +ARGL YLHED     
Sbjct: 87  EKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 642 -----QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 I H DIK +N+LL +   A I+DFGLA      +S        GT+ Y+APE  
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 697 RNST-----ITAKVDVYSFGVLLLEIIS 719
             +         ++D+Y+ G++L E+ S
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G GS GIV    I T + +   VAVKK+D   Q   +   NEVV++   HH N+V + 
Sbjct: 52  KIGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
                G    +V EFL  G L   +         + T +   + R L YLH   +  +IH
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT-VCLSVLRALSYLH---NQGVIH 164
Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKV 705
            DIK  +ILL      ++SDFG    ++    K  R  + GT  ++APE         +V
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 706 DVYSFGVLLLEII 718
           D++S G++++E+I
Sbjct: 223 DIWSLGIMVIEMI 235

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIG 574
            EE    +  ++G+G+FG V          +T A VAVK+L     D +++F+ E+ ++ 
Sbjct: 8   FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 575 QTHHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
             H   +V+  G  +    Q+  LV E+L +G L  FL          R       +R L
Sbjct: 68  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 118
Query: 633 LYLHEDC-------SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAI 684
           LY  + C       S + +H D+  +NIL++   + +I+DFGLAKLL L++    +R   
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
           +    + APE   ++  + + DV+SFGV+L E+ + C KS
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 218

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIGQ 575
           EE    +  ++G+G+FG V          +T A VAVK+L     D +++F+ E+ ++  
Sbjct: 21  EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA 80
Query: 576 THHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            H   +V+  G  +    Q+  LV E+L +G L  FL          R       +R LL
Sbjct: 81  LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLLL 131
Query: 634 YLHEDC-------SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIR 685
           Y  + C       S + +H D+  +NIL++   + +I+DFGLAKLL L++    +R   +
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
               + APE   ++  + + DV+SFGV+L E+ + C KS
Sbjct: 192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIG 574
            EE    +  ++G+G+FG V          +T A VAVK+L     D +++F+ E+ ++ 
Sbjct: 7   FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 575 QTHHKNLVRLLG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
             H   +V+  G  +    Q+  LV E+L +G L  FL          R       +R L
Sbjct: 67  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 117
Query: 633 LYLHEDC-------SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAI 684
           LY  + C       S + +H D+  +NIL++   + +I+DFGLAKLL L++    +R   
Sbjct: 118 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
           +    + APE   ++  + + DV+SFGV+L E+ + C KS
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 217

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 11  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 71  DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 130
Query: 616 P----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 131 PGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 187
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 188 VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 248 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 293 PSQRPTFKQLVEDLDRIVALT 313

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA-VAVKKLDRVFQDGEKEFKNEVVVIGQ 575
           EE    +  ++G+G+FG V          +T A VAVK+L     D +++F+ E+ ++  
Sbjct: 5   EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA 64
Query: 576 THHKNLVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            H   +V+  G     G+  L LV E+L +G L  FL          R       +R LL
Sbjct: 65  LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---------QRHRARLDASRLLL 115
Query: 634 YLHEDC-------SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIR 685
           Y  + C       S + +H D+  +NIL++   + +I+DFGLAKLL L++    +R   +
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKS 723
               + APE   ++  + + DV+SFGV+L E+ + C KS
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 214

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 11  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 71  DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 130
Query: 616 P----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 187
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 248 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 293 PSQRPTFKQLVEDLDRIVALT 313

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 9   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 69  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 11  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 71  DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREP 130
Query: 616 P----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 131 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 187
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 248 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 293 PSQRPTFKQLVEDLDRIVALT 313

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 4   GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 63
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 64  DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 123
Query: 616 P----SWNLRTN------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P    S+N   N             A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 124 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 180
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 181 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 241 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 285
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 286 PSQRPTFKQLVEDLDRIVALT 306

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 262
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 263 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F  ++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 9   QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ EFL  G+L  +L  + +   +++      QI +
Sbjct: 69  KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEV 570
           Y E+E +       +G GSFG VYKG           VAVK L  V    E+   F+NEV
Sbjct: 30  YWEIEASEVMLSTRIGSGSFGTVYKG------KWHGDVAVKILKVVDPTPEQFQAFRNEV 83
Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIA 629
            V+ +T H N++  +G+  +  N  +V ++    +L   L     K       +IA Q A
Sbjct: 84  AVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +G+ YLH   +  IIH D+K  NI L +    +I DFGLA + +            G+  
Sbjct: 143 QGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 690 YVAPEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           ++APE  R   N+  + + DVYS+G++L E+++
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 507 NLPCFSYK----------ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD 556
           ++PC S K          E+   +   ++++G G FG V+    + T    T VAVK + 
Sbjct: 166 SVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVW----MATYNKHTKVAVKTMK 221
Query: 557 RVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP 616
                 E  F  E  V+    H  LV+L     + +   ++ EF+  G+L  FL  +   
Sbjct: 222 PGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGS 279
Query: 617 SWNLRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL 674
              L   I F  QIA G+ ++ +      IH D++  NIL+      +I+DFGLA+++  
Sbjct: 280 KQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 336
Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
           N+  A R   +    + APE     + T K DV+SFG+LL+EI++  +            
Sbjct: 337 NEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI----------- 384
Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                +    N ++   +E          C E+L  + + C +  P  RPT + +  +L+
Sbjct: 385 ----PYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 40/294 (13%)
Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L+       VAVK L        K+F+ E  ++    H++
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF------------------GNLKPSWNLRT 622
           +V+  G C +G   ++V+E++ +G L  FL                   G L  S  L  
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML-- 136
Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
           +IA QIA G++YL    S   +H D+  +N L+      +I DFG+++ +       +  
Sbjct: 137 HIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
                  ++ PE       T + DV+SFGV+L EI +  K               W F  
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ-------------PW-FQL 239
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
              E ++ + +G +     + C +++  V + C Q +P  R  +K++ ++L  +
Sbjct: 240 SNTEVIECITQGRVLERPRV-CPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 13  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 73  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 133 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 86  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 253
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 254 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 37  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 97  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 157 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 12  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 72  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 132 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 262
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 263 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 9   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 69  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 11  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 71  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 131 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 4   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 64  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 124 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVIL------TTRTSTTAVAVKKL 555
           G  E  LP     EL        + +G G+FG V     +        R +  AV + K 
Sbjct: 11  GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-- 613
           D   +D         ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 71  DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 130
Query: 614 ------LKPSWNLRTNI--------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
                   PS N    +        A+Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 131 PGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDN 187
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVLL EI +
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 248 LGGS---------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ +V ++
Sbjct: 293 PSQRPTFKQLVEDLDRIVALT 313

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 264
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 265 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 314

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 253
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 254 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 10  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 70  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 130 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 42  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 99  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 211
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 265
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 266 --------------LLKHNPSQRPMLREVLE 282

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 20/242 (8%)
Query: 501 DGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ 560
           +G  E++L  + Y E +E  D     +G+G++GIVY G  L+ +     +A+K++     
Sbjct: 7   EGDCESDLLEYDY-EYDENGDRVV--LGKGTYGIVYAGRDLSNQVR---IAIKEIPERDS 60
Query: 561 DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNL 620
              +    E+ +     HKN+V+ LG   E     +  E +  G+L++ L     P  + 
Sbjct: 61  RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN 120
Query: 621 RTNIAF---QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLT-LN 675
              I F   QI  GL YLH++   QI+H DIK  N+L++ Y    +ISDFG +K L  +N
Sbjct: 121 EQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177
Query: 676 QSKAIRTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 733
                 T   GT  Y+APE             D++S G  ++E+ + +  F  E+GE  A
Sbjct: 178 PCTETFT---GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF-YELGEPQA 233
Query: 734 IL 735
            +
Sbjct: 234 AM 235

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 24  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 84  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 5   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 65  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 125 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 24  QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 84  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 32/271 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+GSFG V+KG+    RT    VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 28  EKIGKGSFGEVFKGI--DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
             G   +     ++ E+L  G+    L    +P     T IA    +I +GL YLH   S
Sbjct: 85  YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 137
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + S 
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 195
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
             +K D++S G+  +E+         E+     +     F   +N      +EG     N
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHS-ELHPMKVL-----FLIPKNN--PPTLEG-----N 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             K +++ V     C+ ++PS RPT K++L+
Sbjct: 243 YSKPLKEFVEA---CLNKEPSFRPTAKELLK 270

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 40/296 (13%)
Query: 527 VGRGSFGIVYKGVIL------TTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           +G G+FG V     +        R +  AV + K D   +D         ++     HKN
Sbjct: 25  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----SWNLRTN------------I 624
           ++ LLG C +     ++ E+ + G L  +L     P    S+N   N             
Sbjct: 85  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +         T  
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           R    ++APE   +   T + DV+SFGVLL EI +   S                +    
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS---------------PYPGVP 246
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+L  L++          C  +L M+   C    PS RPT K++++ L+ +V ++
Sbjct: 247 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 302

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 32/271 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+GSFG V+KG+    RT    VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 33  EKIGKGSFGEVFKGI--DNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
             G   +     ++ E+L  G+    L    +P     T IA    +I +GL YLH   S
Sbjct: 90  YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 142
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + S 
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 200
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
             +K D++S G+  +E+         E+     +     F   +N      +EG     N
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHS-ELHPMKVL-----FLIPKNNP--PTLEG-----N 247
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             K +++ V     C+ ++PS RPT K++L+
Sbjct: 248 YSKPLKEFVEA---CLNKEPSFRPTAKELLK 275

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 262
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 263 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGN 613
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L         SF+   
Sbjct: 93  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 614 LKPS----------WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             P+               + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 209
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 210 CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
               M  +               K   +++     L+      ++  +   C   DP  R
Sbjct: 270 PYPGMPVD--------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 315
Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 316 PTFKQIVQLIEKQISES 332

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 21  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 78  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 245
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                        ++ +PS RP +++VL+
Sbjct: 246 -------------LKHNPSQRPMLREVLE 261

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 8   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L  +  K       +IA Q ARG
Sbjct: 62  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 120
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 121 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R   ++  + + DVY+FG++L E+++
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 17  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 74  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     + +   + RT + GT  Y+ PE         
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGW----SCHAPSSRRTTLSGTLDYLPPEMIEGRMHDE 186
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 240
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 241 --------------LLKHNPSQRPMLREVLE 257

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R A+ GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 243 --------------LLKHNPSQRPMLREVLE 259

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 253
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 254 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 299
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 300 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 243
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                        ++ +PS RP +++VL+
Sbjct: 244 -------------LKHNPSQRPMLREVLE 259

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 33  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 89
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 90  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 146
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 202
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 257
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                        ++ +PS RP +++VL+
Sbjct: 258 -------------LKHNPSQRPMLREVLE 273

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 10  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 69
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGN 613
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L         SF+   
Sbjct: 70  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 614 LKPS----------WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             P+               + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 186
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
               M  +               K   +++     L+      ++  +   C   DP  R
Sbjct: 247 PYPGMPVD--------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 292
Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 293 PTFKQIVQLIEKQISES 309

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 32/271 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+GSFG V+KG+    RT    VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 13  EKIGKGSFGEVFKGI--DNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
             G   +     ++ E+L  G+    L    +P     T IA    +I +GL YLH   S
Sbjct: 70  YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + S 
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 180
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
             +K D++S G+  +E+         E+     +     F   +N      +EG     N
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHS-ELHPMKVL-----FLIPKNN--PPTLEG-----N 227
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             K +++ V     C+ ++PS RPT K++L+
Sbjct: 228 YSKPLKEFVEA---CLNKEPSFRPTAKELLK 255

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 32/271 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+GSFG V+KG+    RT    VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 13  EKIGKGSFGEVFKGI--DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
             G   +     ++ E+L  G+    L    +P     T IA    +I +GL YLH   S
Sbjct: 70  YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + S 
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 180
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
             +K D++S G+  +E+         E+     +     F   +N      +EG     N
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHS-ELHPMKVL-----FLIPKNN--PPTLEG-----N 227
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             K +++ V     C+ ++PS RPT K++L+
Sbjct: 228 YSKPLKEFVEA---CLNKEPSFRPTAKELLK 255

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 527 VGRGSFGIVYK----GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +GRG+FG V +    G+  T    T AV + K      +         ++I   HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 583 RLLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNI--A 625
            LLG C + G   +++ EF   G L+++L                  K    L   I  +
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 743
               ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C 
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 253
Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 254 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 117/225 (52%), Gaps = 33/225 (14%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNL 581
           +++G+G++GIV+K +    R +   VAVKK+   FQ   D ++ F+  +++   + H+N+
Sbjct: 15  KKLGKGAYGIVWKSI---DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 582 VRLLGF--CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V LL     D  ++  LV++++     A      L+P    +  + +Q+ + + YLH   
Sbjct: 72  VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH--KQYVVYQLIKVIKYLH--- 126
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKL------------LTLNQS-------KAI 680
           S  ++H D+KP NILL+   + +++DFGL++             L++N++       + I
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 681 RTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSF 724
            T    T+ Y APE    ST  T  +D++S G +L EI+  +  F
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + +G+GSFG VYKG+   T+     VA+K +D    +D  ++ + E+ V+ Q     + R
Sbjct: 25  DRIGKGSFGEVYKGIDNHTKE---VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR 81
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
             G   +     ++ E+L  G+    L    KP     T IA    +I +GL YLH   S
Sbjct: 82  YFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLH---S 134
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  N+LL +  + +++DFG+A  LT  Q K  R    GT  ++APE  + S 
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 192
Query: 701 ITAKVDVYSFGVLLLEI 717
              K D++S G+  +E+
Sbjct: 193 YDFKADIWSLGITAIEL 209

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 20  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 77  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 133
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 243
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 244 --------------LLKHNPSQRPMLREVLE 260

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 21  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   G +   L    K           ++A  L Y H   S ++
Sbjct: 78  LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 244
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 245 --------------LLKHNPSQRPMLREVLE 261

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R A+ GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 32/282 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 21  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 78  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 245
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPN 804
                        ++ +PS RP +++VL+        S P N
Sbjct: 246 -------------LKHNPSQRPXLREVLEHPWITANSSKPSN 274

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 15  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 72  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 128
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 238
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 239 --------------LLKHNPSQRPMLREVLE 255

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 33  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 92
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGN 613
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L         SF+   
Sbjct: 93  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 614 LKPS----------WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             P+               + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 209
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 210 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
               M  +               K   +++     L+      ++  +   C   DP  R
Sbjct: 270 PYPGMPVD--------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 315
Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 316 PTFKQIVQLIEKQISES 332

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 21  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 78  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 244
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 245 --------------LLKHNPSQRPMLREVLE 261

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 34/234 (14%)
Query: 518 EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVI 573
           E  +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIA 629
            + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ 
Sbjct: 64  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R    
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTH 169
Query: 690 YVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
            V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 34/234 (14%)
Query: 518 EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVI 573
           E  +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIA 629
            + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ 
Sbjct: 64  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R    
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTH 169
Query: 690 YVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
            V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 77  DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         +   +   + + L  LH   +
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 188
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 246
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 247 YGPEVDIWSLGIMVIEMV 264

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             RI+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 17  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 74  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 240
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 241 --------------LLKHNPSQRPMLREVLE 257

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 243 --------------LLKHNPSQRPMLREVLE 259

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 28  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 87
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGN 613
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L         SF+   
Sbjct: 88  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 147
Query: 614 LKPS----------WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             P+               + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 204
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 205 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
               M  +               K   +++     L+      ++  +   C   DP  R
Sbjct: 265 PYPGMPVD--------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 310
Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 311 PTFKQIVQLIEKQISES 327

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 154 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         +   +   + + L  LH   +
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 265
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 323
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 324 YGPEVDIWSLGIMVIEMV 341

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 17/216 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G++GIVY G  L+ +     +A+K++        +    E+ +     HKN+V+ LG
Sbjct: 16  LGKGTYGIVYAGRDLSNQVR---IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQI 643
              E     +  E +  G+L++ L     P  +    I F   QI  GL YLH++   QI
Sbjct: 73  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 644 IHCDIKPQNILLDDYYNA-RISDFGLAKLLT-LNQSKAIRTAIRGTKGYVAPEWFRNST- 700
           +H DIK  N+L++ Y    +ISDFG +K L  +N      T   GT  Y+APE       
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPR 186
Query: 701 -ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
                 D++S G  ++E+ + +  F  E+GE  A +
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAM 221

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 33/289 (11%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L  +  K       +IA Q ARG
Sbjct: 74  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++
Sbjct: 133 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
           APE  R   ++  + + DVY+FG++L E+++ +          Y+ + +      R++ +
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINN------RDQII 235
Query: 749 DDLVEGDMEA-LNDIK--CVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           + +  G +   L+ ++  C +++  +   C+++    RP+  ++L  +E
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 58  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE 563
           T LP     E      +F + +G G+FG V +     L    +   VAVK L       E
Sbjct: 26  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 85
Query: 564 KE-FKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA--------SFLFGN 613
           +E   +E+ V+    +H N+V LLG C  G   L++ E+   G L         SF+   
Sbjct: 86  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 145
Query: 614 LKPS----------WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
             P+               + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKI 202
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 203 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
               M  +               K   +++     L+      ++  +   C   DP  R
Sbjct: 263 PYPGMPVD--------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 308
Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 309 PTFKQIVQLIEKQISES 325

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 34  DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         +   +   + + L  LH   +
Sbjct: 90  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 145
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 203
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 204 YGPEVDIWSLGIMVIEMV 221

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 60  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 60  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 513 YKELEEATD--NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNE 569
           +K+ E+  D  +F++ +G G+F  V   ++   + +   VA+K + +   +G E   +NE
Sbjct: 10  WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + V+ +  H N+V L    + G +  L+ + ++ G L   +      +    + + FQ+ 
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNIL---LDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             + YLH+     I+H D+KP+N+L   LD+     ISDFGL+K+       ++ +   G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVL 713
           T GYVAPE       +  VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 58  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 59  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 62  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 118
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 119 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 167
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 27  DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +  + + +      +   + + L  LH   +
Sbjct: 83  VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 138
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 196
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 197 YGPEVDIWSLGIMVIEMV 214

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 21  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   G +   L    K           ++A  L Y H   S ++
Sbjct: 78  LYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 244
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 245 --------------LLKHNPSQRPMLREVLE 261

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 40/296 (13%)
Query: 527 VGRGSFGIVYKGVIL------TTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           +G G+FG V     +        R +  AV + K D   +D         ++     HKN
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN--------LKPSWNLRTNI-------- 624
           ++ LLG C +     ++ E+ + G L  +L             PS N    +        
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +         T  
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           R    ++APE   +   T + DV+SFGVLL EI +   S                +    
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS---------------PYPGVP 242
Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            E+L  L++          C  +L M+   C    PS RPT K++++ L+ +V ++
Sbjct: 243 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 298

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 32  DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +         +   +   + + L  LH   +
Sbjct: 88  VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-AAVCLAVLQALSVLH---A 143
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 201
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 202 YGPEVDIWSLGIMVIEMV 219

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 58  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 58  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 59  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHE 164
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 513 YKELEEATD--NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNE 569
           +K+ E+  D  +F++ +G G+F  V   ++   + +   VA+K + +   +G E   +NE
Sbjct: 10  WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + V+ +  H N+V L    + G +  L+ + ++ G L   +      +    + + FQ+ 
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNIL---LDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             + YLH+     I+H D+KP+N+L   LD+     ISDFGL+K+       ++ +   G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVL 713
           T GYVAPE       +  VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 705 VDVYSFGVLLLEIIS 719
           VD++S G++ +E+I 
Sbjct: 197 VDIWSLGIMAIEMIE 211

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           DNF + +G GS GIV    I T R+S   VAVKK+D   Q   +   NEVV++    H+N
Sbjct: 23  DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V +      G    +V EFL  G L   +  + + +      +   + + L  LH   +
Sbjct: 79  VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 134
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++    +  R  + GT  ++APE      
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLP 192
Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 193 YGPEVDIWSLGIMVIEMV 210

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              ++   +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +   ++++G G FG V+    + T    T VAVK +       E  F  E  V+ 
Sbjct: 11  EIPRESLKLEKKLGAGQFGEVW----MATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMK 65
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGL 632
              H  LV+L     + +   ++ EF+  G+L  FL  +      L   I F  QIA G+
Sbjct: 66  TLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++ +      IH D++  NIL+      +I+DFGLA+++  N+  A R   +    + A
Sbjct: 125 AFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWTA 180
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE     + T K DV+SFG+LL+EI++  +                 +    N ++   +
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVIRAL 225
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E          C E+L  + + C +  P  RPT + +  +L+
Sbjct: 226 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 117
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 118 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 166
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 705 VDVYSFGVLLLEIIS 719
           VD++S G++ +E+I 
Sbjct: 197 VDIWSLGIMAIEMIE 211

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V        + +T   VAVKKL    ++  ++F+ E+ ++
Sbjct: 7   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 574 GQTHHKNLVRLLGFCDEG--QNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIAR 630
               H N+V+  G C     +N  L+ E+L  G+L  +L  + +   +++      QI +
Sbjct: 67  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKG 689
           G+ YL    + + IH ++  +NIL+++    +I DFGL K+L  ++    ++        
Sbjct: 127 GMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + APE    S  +   DV+SFGV+L E+ +
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 705 VDVYSFGVLLLEIIS 719
           VD++S G++ +E+I 
Sbjct: 197 VDIWSLGIMAIEMIE 211

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 64  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 120
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 121 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 169
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           EE+G G+FG+V++ V    + +      K ++  +   +   KNE+ ++ Q HH  L+ L
Sbjct: 57  EELGSGAFGVVHRCV---EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
               ++    +L+ EFL+ G L   +   + K S     N   Q   GL ++HE     I
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---I 170
Query: 644 IHCDIKPQNILLD--DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +H DIKP+NI+ +     + +I DFGLA  L  ++   + TA   T  + APE      +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDREPV 227
Query: 702 TAKVDVYSFGVLLLEIISCRKSF----DIEMGEEYAILTDWAFD 741
               D+++ GVL   ++S    F    D+E  +      DW FD
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-RCDWEFD 270

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 27  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 84  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 705 VDVYSFGVLLLEIIS 719
           VD++S G++ +E+I 
Sbjct: 198 VDIWSLGIMAIEMIE 212

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 513 YKELEEATD--NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNE 569
           +K+ E+  D  +F++ +G G+F  V   ++   + +   VA+K + +   +G E   +NE
Sbjct: 10  WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + V+ +  H N+V L    + G +  L+ + ++ G L   +      +    + + FQ+ 
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNIL---LDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             + YLH+     I+H D+KP+N+L   LD+     ISDFGL+K+       ++ +   G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVL 713
           T GYVAPE       +  VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 18  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 75  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I++FG     +++   + RT + GT  Y+ PE         
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 187
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 242
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                        ++ +PS RP +++VL+
Sbjct: 243 -------------LKHNPSQRPMLREVLE 258

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 513 YKELEEATD--NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNE 569
           +K+ E+  D  +F++ +G G+F  V   ++   + +   VA+K + +   +G E   +NE
Sbjct: 10  WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + V+ +  H N+V L    + G +  L+ + ++ G L   +      +    + + FQ+ 
Sbjct: 67  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNIL---LDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             + YLH+     I+H D+KP+N+L   LD+     ISDFGL+K+       ++ +   G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVL 713
           T GYVAPE       +  VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 31/285 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVVIGQTHHKNLV 582
           VG GS+G+V K      + +   VA+KK   +  D +K  K     E+ ++ Q  H+NLV
Sbjct: 33  VGEGSYGMVMK---CRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASF-LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
            LL  C + +   LV+EF+++  L    LF N    + +     FQI  G+ + H   S 
Sbjct: 88  NLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            IIH DIKP+NIL+      ++ DFG A+  TL     +      T+ Y APE       
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 702 TAK-VDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNE------------ 746
             K VDV++ G L+ E+      F  D ++ + Y I+        R++            
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +L ++ E +       K  E ++ ++  C+  DP  RP   ++L 
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLN----NGTLASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+    +   AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 33/289 (11%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 20  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+    Q   +V ++    +L   L  +  K       +IA Q ARG
Sbjct: 74  LRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++
Sbjct: 133 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
           APE  R   ++  + + DVY+FG++L E+++ +          Y+ + +      R++ +
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP--------YSNINN------RDQII 235
Query: 749 DDLVEGDMEA-LNDIK--CVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           + +  G +   L+ ++  C +++  +   C+++    RP+  ++L  +E
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R A+ GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    ++ Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 117 SFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLN----NGTLASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+    +   AS L G   P   L  +  FQ+ +
Sbjct: 60  ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I++FG     +++   + RT + GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 243 --------------LLKHNPSQRPMLREVLE 259

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 42  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 99  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 265
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 266 --------------LLKHNPSQRPMLREVLE 282

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 18  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 75  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           KVD++S GVL  E +  +  F+    +E Y  ++   F        D + EG  + ++ +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDLISRL 242
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                        ++ +PS RP +++VL+
Sbjct: 243 -------------LKHNPSQRPMLREVLE 258

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 17  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 74  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 240
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 241 --------------LLKHNPSQRPMLREVLE 257

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   +     +A+K L +   +    E + + EV +     H N++R
Sbjct: 13  LGKGKFGNVY---LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 69
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 70  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 126
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 236
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 237 --------------LLKHNPSQRPMLREVLE 253

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLLG 586
            RG FG V+K  ++        VAVK      QD +  + + E+       H+NL++ + 
Sbjct: 24  ARGRFGCVWKAQLMND-----FVAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 587 FCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED---C 639
               G N      L+  F + G+L  +L GN+  +WN   ++A  ++RGL YLHED   C
Sbjct: 77  AEKRGSNLEVELWLITAFHDKGSLTDYLKGNII-TWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 640 SAQ-----IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
             +     I H D K +N+LL     A ++DFGLA      +         GT+ Y+APE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 695 WFRNST-----ITAKVDVYSFGVLLLEIISCRKSFD 725
               +         ++D+Y+ G++L E++S  K+ D
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 34/290 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G FG V +G +     ++  VAVK  KLD   Q   +EF +E   +    H N++RL
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 585 LGFCDEGQNR-----LLVYEFLNNGTLASF-LFGNLKPSWN---LRTNIAFQ--IARGLL 633
           LG C E  ++     +++  F+  G L ++ L+  L+       L+T + F   IA G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA-KLLTLNQSKAIRTAIRGTKGYVA 692
           YL    +   +H D+  +N +L D     ++DFGL+ K+ + +  +  R A    K ++A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK-WIA 217
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
            E   +   T+K DV++FGV + EI +  +      G +   + D+    +R ++ +D  
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLHGHRLKQPED-- 273
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
                      C+++L  +   C + DP  RPT   +   LE ++E SLP
Sbjct: 274 -----------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE-SLP 311

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQ 575
           ++  FK  E++G G++  VYKG+    +T+   VA+K++    ++G       E+ ++ +
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGL---NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGT---LASFLFGNLKP--SWNLRTNIAFQIAR 630
             H+N+VRL           LV+EF++N     + S   GN       NL     +Q+ +
Sbjct: 60  LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + HE+   +I+H D+KPQN+L++     ++ DFGLA+   +  +      +  T  Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 691 VAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSF 724
            AP+    S T +  +D++S G +L E+I+ +  F
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 16  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 73  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 239
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 240 --------------LLKHNPSQRPMLREVLE 256

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 58  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KP+N+L++     +++DFGLA        +A    +R     
Sbjct: 115 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 163
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 60  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KP+N+L++     +++DFGLA        +A    +R     
Sbjct: 117 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 165
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG FG V+   +  T        + K     + G +    E  ++ + H + +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSAQ 642
             +   +  LV   +N G +   ++      P +     I +  QI  GL +LH+     
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           II+ D+KP+N+LLDD  N RISD GLA  L   Q+K    A  GT G++APE        
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD ++ GV L E+I+ R  F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG FG V+   +  T        + K     + G +    E  ++ + H + +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSAQ 642
             +   +  LV   +N G +   ++      P +     I +  QI  GL +LH+     
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           II+ D+KP+N+LLDD  N RISD GLA  L   Q+K    A  GT G++APE        
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD ++ GV L E+I+ R  F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG FG V+   +  T        + K     + G +    E  ++ + H + +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSAQ 642
             +   +  LV   +N G +   ++      P +     I +  QI  GL +LH+     
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           II+ D+KP+N+LLDD  N RISD GLA  L   Q+K    A  GT G++APE        
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD ++ GV L E+I+ R  F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +    +++G G FG V+ G       ++T VAVK L +      + F  E  ++ 
Sbjct: 8   EIPRESIKLVKKLGAGQFGEVWMGYY----NNSTKVAVKTL-KPGTMSVQAFLEEANLMK 62
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGL 632
              H  LVRL     + +   ++ EF+  G+L  FL  +      L   I F  QIA G+
Sbjct: 63  TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        IH D++  N+L+ +    +I+DFGLA+++  N+  A R   +    + A
Sbjct: 123 AYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-REGAKFPIKWTA 178
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           PE       T K +V+SFG+LL EI++  K
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVTYGK 208

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG FG V+   +  T        + K     + G +    E  ++ + H + +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAF--QIARGLLYLHEDCSAQ 642
             +   +  LV   +N G +   ++      P +     I +  QI  GL +LH+     
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           II+ D+KP+N+LLDD  N RISD GLA  L   Q+K    A  GT G++APE        
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD ++ GV L E+I+ R  F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 59  ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KP+N+L++     +++DFGLA        +A    +R     
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 243 --------------LLKHNPSQRPMLREVLE 259

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G V+K   L  +     VA+K++ RV Q GE+        EV V+       H
Sbjct: 18  EIGEGAYGKVFKARDL--KNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL   C     D      LV+E ++   L ++L    +P     T  ++ FQ+ RG
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH   S +++H D+KPQNIL+      +++DFGLA++ +   +    T++  T  Y 
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    S+    VD++S G +  E+   +  F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E+   +    + +G G FG V+ G       ++T VAVK L +      + F  E  ++ 
Sbjct: 9   EIPRESIKLVKRLGAGQFGEVWMGYY----NNSTKVAVKTL-KPGTMSVQAFLEEANLMK 63
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGL 632
              H  LVRL       +   ++ E++  G+L  FL  +      L   I F  QIA G+
Sbjct: 64  TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            Y+        IH D++  N+L+ +    +I+DFGLA+++  N+  A R   +    + A
Sbjct: 124 AYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-REGAKFPIKWTA 179
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           PE       T K DV+SFG+LL EI++  K
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVTYGK 209

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 19  LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    K           ++A  L Y H   S ++
Sbjct: 76  LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILT--DWAFDCYRNEKLDDLVEGDMEALN 760
           KVD++S GVL  E +  +  F+    +E Y  ++  ++ F  +  E   DL+        
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR------ 242
Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                          ++ +PS RP +++VL+
Sbjct: 243 --------------LLKHNPSQRPMLREVLE 259

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G FG V      G+          VAVK L D
Sbjct: 7   GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 66
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 67  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 126
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 183
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 244 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 288
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 289 PSQRPTFKQLVEDLDRILTLT 309

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT 622
           + K E+ ++   +H+N+V+  G C E  G    L+ EFL +G+L  +L  N K   NL+ 
Sbjct: 69  DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 127
Query: 623 NI--AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
            +  A QI +G+ YL    S Q +H D+  +N+L++  +  +I DFGL K +  ++    
Sbjct: 128 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 681 RTAIRGTKGY-VAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
               R +  +  APE    S      DV+SFGV L E+++
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G V+K   L  +     VA+K++ RV Q GE+        EV V+       H
Sbjct: 18  EIGEGAYGKVFKARDL--KNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL   C     D      LV+E ++   L ++L    +P     T  ++ FQ+ RG
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH   S +++H D+KPQNIL+      +++DFGLA++ +   +    T++  T  Y 
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    S+    VD++S G +  E+   +  F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G FG V      G+          VAVK L D
Sbjct: 10  GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 69
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 70  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 129
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 186
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 247 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 291
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 292 PSQRPTFKQLVEDLDRILTLT 312

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G FG V      G+          VAVK L D
Sbjct: 5   GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 64
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 65  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 124
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENN 181
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 242 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 286
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 287 PSQRPTFKQLVEDLDRILTLT 307

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G V+K   L  +     VA+K++ RV Q GE+        EV V+       H
Sbjct: 18  EIGEGAYGKVFKARDL--KNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL   C     D      LV+E ++   L ++L    +P     T  ++ FQ+ RG
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH   S +++H D+KPQNIL+      +++DFGLA++ +   +    T++  T  Y 
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYR 186
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    S+    VD++S G +  E+   +  F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT 622
           + K E+ ++   +H+N+V+  G C E  G    L+ EFL +G+L  +L  N K   NL+ 
Sbjct: 57  DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 115
Query: 623 NI--AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
            +  A QI +G+ YL    S Q +H D+  +N+L++  +  +I DFGL K +  ++    
Sbjct: 116 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 681 RTAIRGTKGY-VAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
               R +  +  APE    S      DV+SFGV L E+++
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KP+N+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 17/232 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKN-EVVVIGQTHHKNLVR 583
           +G GSFG V+   ++ +R +    A+K L +  V +  + E  N E +++    H  ++R
Sbjct: 14  LGTGSFGRVH---LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           + G   + Q   ++ +++  G L S L  + +    +    A ++   L YLH   S  I
Sbjct: 71  MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDI 127
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+NILLD   + +I+DFG AK +       +   + GT  Y+APE         
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 704 KVDVYSFGVLLLEIISCRKSF-DIEMGEEYAIL--TDWAFDCYRNEKLDDLV 752
            +D +SFG+L+ E+++    F D    + Y  +   +  F  + NE + DL+
Sbjct: 183 SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL 234

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +
Sbjct: 59  ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KP+N+L++     +++DFGLA        +A    +R     
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 164
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+ K  LD   +        E+ ++ + 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL 59
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 165
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+ K  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+EFL+        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 27  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +         +   +  +  + L +LH   S Q+I
Sbjct: 84  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H +IK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 705 VDVYSFGVLLLEIIS 719
           VD++S G++ +E+I 
Sbjct: 198 VDIWSLGIMAIEMIE 212

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 574
           +DN+  KEE+G+G+F +V + V  TT     A  +  KKL  R FQ  E+E +    +  
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +  H N+VRL     E     LV++ +  G L   +      S    ++   QI   + Y
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
            H   S  I+H ++KP+N+LL         +++DFGLA  + +N S+A      GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 741
           +PE  +    +  VD+++ GV+L  ++     F D +    YA +   A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 63  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 122 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 574
           +DN+  KEE+G+G+F +V + V  TT     A  +  KKL  R FQ  E+E +    +  
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 83
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +  H N+VRL     E     LV++ +  G L   +      S    ++   QI   + Y
Sbjct: 84  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
            H   S  I+H ++KP+N+LL         +++DFGLA  + +N S+A      GT GY+
Sbjct: 144 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 197
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 741
           +PE  +    +  VD+++ GV+L  ++     F D +    YA +   A+D
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 248

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 63  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 122 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 574
           +DN+  KEE+G+G+F +V + V  TT     A  +  KKL  R FQ  E+E +    +  
Sbjct: 4   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 59
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +  H N+VRL     E     LV++ +  G L   +      S    ++   QI   + Y
Sbjct: 60  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
            H   S  I+H ++KP+N+LL         +++DFGLA  + +N S+A      GT GY+
Sbjct: 120 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 173
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 741
           +PE  +    +  VD+++ GV+L  ++     F D +    YA +   A+D
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 224

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G FG V      G+          VAVK L D
Sbjct: 64  GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++ E+ + G L  +L     
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 240
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 301 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 345
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 346 PSQRPTFKQLVEDLDRILTLT 366

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 58  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 117 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 6   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 59
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 60  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 118
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 119 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLD-RVFQDGEKEFKNEVVVIG 574
           +DN+  KEE+G+G+F +V + V  TT     A  +  KKL  R FQ  E+E +    +  
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +  H N+VRL     E     LV++ +  G L   +      S    ++   QI   + Y
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
            H   S  I+H ++KP+N+LL         +++DFGLA  + +N S+A      GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 741
           +PE  +    +  VD+++ GV+L  ++     F D +    YA +   A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 78  GVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TXXKASKGKLPIKWMAPESINF 186
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 86  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 145 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KL 555
           S G+G +++ L C     + E      E++G GSFG+V +G        T +VAVK  K 
Sbjct: 2   SAGEGPLQS-LTCL----IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP 56
Query: 556 DRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL-------- 606
           D + Q +   +F  EV  +    H+NL+RL G       ++ V E    G+L        
Sbjct: 57  DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ 115
Query: 607 ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF 666
             FL G L       +  A Q+A G+ YL    S + IH D+  +N+LL      +I DF
Sbjct: 116 GHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 165
Query: 667 GLAKLLTLNQSKAIRTAIRGTK-GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           GL + L  N    +    R     + APE  +  T +   D + FGV L E+ +
Sbjct: 166 GLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 31  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 84
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 85  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 143
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 144 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 201 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++  + + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   R S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 20  LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    +           ++A  L Y H   S ++
Sbjct: 77  LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + RT + GT  Y+ PE         
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           KVD++S GVL  E +     F+    +E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQE 217

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+    Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 58  LRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA + +          + G+  ++
Sbjct: 117 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 160
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 214
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 274
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 275 KCWAYDPSRRPRFTEL 290

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 83  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 137
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 191
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 251
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 252 KCWAYDPSRRPRFTEL 267

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 81  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 135
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 189
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 190 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 249
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 250 KCWAYDPSRRPRFTEL 265

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 78  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 80  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 188
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 248
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 249 KCWAYDPSRRPRFTEL 264

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 75  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 129
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 183
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 243
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 244 KCWAYDPSRRPRFTEL 259

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 40/321 (12%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYK----GVILTTRTSTTAVAVKKL-D 556
           G  E  LP     E         + +G G+FG V      G+          VAVK L D
Sbjct: 18  GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 557 RVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
              +    +  +E+ ++     HKN++ LLG C +     ++  + + G L  +L     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRP 137
Query: 616 PSWNLRTNI----------------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY 659
           P      +I                 +Q+ARG+ YL    S + IH D+  +N+L+ +  
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENN 194
Query: 660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
             +I+DFGLA+ +         T  R    ++APE   +   T + DV+SFGVL+ EI +
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 720 CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQED 779
              S                +     E+L  L++          C  +L M+   C    
Sbjct: 255 LGGS---------------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 780 PSLRPTMKKVLQMLEGVVEVS 800
           PS RPT K++++ L+ ++ ++
Sbjct: 300 PSQRPTFKQLVEDLDRILTLT 320

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 78  GVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KL 555
           S G+G +++ L C     + E      E++G GSFG+V +G        T +VAVK  K 
Sbjct: 2   SAGEGPLQS-LTCL----IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP 56
Query: 556 DRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL-------- 606
           D + Q +   +F  EV  +    H+NL+RL G       ++ V E    G+L        
Sbjct: 57  DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQ 115
Query: 607 ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF 666
             FL G L       +  A Q+A G+ YL    S + IH D+  +N+LL      +I DF
Sbjct: 116 GHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 165
Query: 667 GLAKLLTLNQSKAIRTAIRGTK-GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           GL + L  N    +    R     + APE  +  T +   D + FGV L E+ +
Sbjct: 166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIG 574
           + +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIAR 630
           + +H N+V+LL          LV+E ++        AS L G   P   L  +  FQ+ +
Sbjct: 61  ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYXHE 166
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
           V   W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 39/284 (13%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVV 571
           E++     F +E+G G FG+V  G           VA+K    + ++G   E EF  E  
Sbjct: 5   EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIK----MIKEGSMSEDEFIEEAK 56
Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIA 629
           V+    H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     + 
Sbjct: 57  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 115
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK- 688
             + YL    S Q +H D+  +N L++D    ++SDFGL++ +  ++     T+ RG+K 
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSRGSKF 168
Query: 689 --GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +  PE    S  ++K D+++FGVL+ EI S               L    ++ + N 
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNS 213
Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
           +  + +   +         EK+  +   C  E    RPT K +L
Sbjct: 214 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 257

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 78  GVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 246
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 247 KCWAYDPSRRPRFTEL 262

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 34/231 (14%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK      + +   VA+KK  LD   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTL----ASFLFGNLKPSWNLRTNIAFQIARGL 632
           +H N+V+LL          LV+E ++        AS L G   P   L  +  FQ+ +GL
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            + H   S +++H D+KPQN+L++     +++DFGLA        +A    +R     V 
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA--------RAFGVPVRTYTHEVV 164
Query: 693 PEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAI 734
             W+R   I       +  VD++S G +  E+++ R  F  D E+ + + I
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G++    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 1   GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 57
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 113
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILD 170
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 171 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 719 SCRKSF 724
           + R  F
Sbjct: 220 TGRTLF 225

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK-AIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 193 SKSDVWSFGVLMWEAFS 209

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 31/276 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           +  EE+G G+FG+V++   +T R +    A K +    +  ++  + E+  +    H  L
Sbjct: 160 DIHEELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCS 640
           V L    ++    +++YEF++ G L   +     K S +       Q+ +GL ++HE+  
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 274
Query: 641 AQIIHCDIKPQNILLDDYYN--ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +H D+KP+NI+     +   ++ DFGL   L   QS  + T   GT  + APE    
Sbjct: 275 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 330
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNEKLDDLVEGD 755
             +    D++S GVL   ++S    F  E  +E        DW  D       D    G 
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD-------DSAFSGI 383
Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            E   D   + KL++        DP+ R T+ + L+
Sbjct: 384 SEDGKDF--IRKLLLA-------DPNTRMTIHQALE 410

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 209 SKSDVWSFGVLMWEAFS 225

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 209 SKSDVWSFGVLMWEAFS 225

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 58  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++
Sbjct: 117 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G++    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 67
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 68  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 123
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 180
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 181 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 719 SCRKSF 724
           + R  F
Sbjct: 230 TGRTLF 235

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G++    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 67
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 68  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 123
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 180
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 181 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 719 SCRKSF 724
           + R  F
Sbjct: 230 TGRTLF 235

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 24  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 77
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 78  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 136
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++
Sbjct: 137 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK--EFKNEVVV 572
           E+ +      + +G GSFG VYKG           VAVK L+      ++   FKNEV V
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARG 631
           + +T H N++  +G+  + Q   +V ++    +L   L     K       +IA Q A+G
Sbjct: 86  LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           + YLH   +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++
Sbjct: 145 MDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 692 APEWFR---NSTITAKVDVYSFGVLLLEIIS 719
           APE  R    +  + + DVY+FG++L E+++
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G GS GIV    +   + S   VAVK +D   Q   +   NEVV++    H N+V + 
Sbjct: 52  KIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
                G+   ++ EFL  G L   +   ++ +      +   + + L YLH   +  +IH
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIH 164
Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKV 705
            DIK  +ILL      ++SDFG    ++ +  K  R  + GT  ++APE    S    +V
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 706 DVYSFGVLLLEII 718
           D++S G++++E++
Sbjct: 223 DIWSLGIMVIEMV 235

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 581
           E++G GSFG+V +G        T +VAVK  K D + Q +   +F  EV  +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +RL G       ++ V E    G+L          FL G L       +  A Q+A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVA 692
           YL    S + IH D+  +N+LL      +I DFGL + L  N    +    R     + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE  +  T +   D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 31  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 91  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 146
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 207 SKSDVWSFGVLMWEAFS 223

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 566
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 626
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 627 KCWAYDPSRRPRFTEL 642

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G++    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 1   GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 57
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 113
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 171 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 719 SCRKSF 724
           + R  F
Sbjct: 220 TGRTLF 225

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 47/300 (15%)
Query: 507 NLPCFSYK----------ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD 556
           ++PC S K          E+   +   ++++G G FG V+    + T    T VAVK + 
Sbjct: 160 SVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVW----MATYNKHTKVAVKTMK 215
Query: 557 RVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP 616
                 E  F  E  V+    H  LV+L     + +   ++ EF+  G+L  FL  +   
Sbjct: 216 PGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGS 273
Query: 617 SWNLRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL 674
              L   I F  QIA G+ ++ +      IH D++  NIL+      +I+DFGLA     
Sbjct: 274 KQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLA----- 325
Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
                 R   +    + APE     + T K DV+SFG+LL+EI++  +            
Sbjct: 326 ------RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI----------- 368
Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                +    N ++   +E          C E+L  + + C +  P  RPT + +  +L+
Sbjct: 369 ----PYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 520 TDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIG 574
           +D +K +  +G+GSFG V   ++   + +    AVK + +  V Q  +KE    EV ++ 
Sbjct: 31  SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           Q  H N+++L  F ++     LV E    G L   +    + S      I  Q+  G+ Y
Sbjct: 88  QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 635 LHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +H++   +I+H D+KP+N+LL+      N RI DFGL+       SK ++  I GT  Y+
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 201
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS 719
           APE   + T   K DV+S GV+L  ++S
Sbjct: 202 APEVL-HGTYDEKCDVWSTGVILYILLS 228

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 42/256 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDCSAQI 643
           G   E     ++ E    G L SFL    K S +L + I  A+Q++  L YL    S + 
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG-----YVAPEWFRN 698
           +H DI  +N+L+      ++ DFGL++ +  +      T  + +KG     ++APE    
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 566
Query: 699 STITAKVDVYSFGVLLLEII-SCRKSFD----------IEMGEE-----------YAILT 736
              T+  DV+ FGV + EI+    K F           IE GE            Y+++T
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 626
Query: 737 D-WAFDCYRNEKLDDL 751
             WA+D  R  +  +L
Sbjct: 627 KCWAYDPSRRPRFTEL 642

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 193 SKSDVWSFGVLMWEAFS 209

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 520 TDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIG 574
           +D +K +  +G+GSFG V   ++   + +    AVK + +  V Q  +KE    EV ++ 
Sbjct: 48  SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           Q  H N+++L  F ++     LV E    G L   +    + S      I  Q+  G+ Y
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 635 LHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +H++   +I+H D+KP+N+LL+      N RI DFGL+       SK ++  I GT  Y+
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 218
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS 719
           APE   + T   K DV+S GV+L  ++S
Sbjct: 219 APEVL-HGTYDEKCDVWSTGVILYILLS 245

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 520 TDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIG 574
           +D +K +  +G+GSFG V   ++   + +    AVK + +  V Q  +KE    EV ++ 
Sbjct: 49  SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           Q  H N+++L  F ++     LV E    G L   +    + S      I  Q+  G+ Y
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 635 LHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +H++   +I+H D+KP+N+LL+      N RI DFGL+       SK ++  I GT  Y+
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 219
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS 719
           APE   + T   K DV+S GV+L  ++S
Sbjct: 220 APEVL-HGTYDEKCDVWSTGVILYILLS 246

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 11  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 71  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 126
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 187 SKSDVWSFGVLMWEAFS 203

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 581
           E++G GSFG+V +G        T +VAVK  K D + Q +   +F  EV  +    H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +RL G       ++ V E    G+L          FL G L       +  A Q+A G+ 
Sbjct: 78  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVA 692
           YL    S + IH D+  +N+LL      +I DFGL + L  N    +    R     + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE  +  T +   D + FGV L E+ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 520 TDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIG 574
           +D +K +  +G+GSFG V   ++   + +    AVK + +  V Q  +KE    EV ++ 
Sbjct: 25  SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           Q  H N+++L  F ++     LV E    G L   +    + S      I  Q+  G+ Y
Sbjct: 82  QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 635 LHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +H++   +I+H D+KP+N+LL+      N RI DFGL+       SK ++  I GT  Y+
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 195
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS 719
           APE   + T   K DV+S GV+L  ++S
Sbjct: 196 APEVL-HGTYDEKCDVWSTGVILYILLS 222

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 490
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 551 SKSDVWSFGVLMWEAFS 567

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 581
           E++G GSFG+V +G        T +VAVK  K D + Q +   +F  EV  +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +RL G       ++ V E    G+L          FL G L       +  A Q+A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVA 692
           YL    S + IH D+  +N+LL      +I DFGL + L  N    +    R     + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE  +  T +   D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 491
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 552 SKSDVWSFGVLMWEAFS 568

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E++     F +E+G G FG+V  G           VA+K + +     E EF  E  V+ 
Sbjct: 20  EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMM 74
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGL 632
              H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     +   +
Sbjct: 75  NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAM 133
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL    S Q +H D+  +N L++D    ++SDFGL++ + L+  +      +    +  
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSP 189
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE    S  ++K D+++FGVL+ EI S               L    ++ + N +  + +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI 234
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
              +         EK+  +   C  E    RPT K +L
Sbjct: 235 AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +E+GRG F +V + +  +T     A  +KK  R  QD   E  +E+ V+     K+  R+
Sbjct: 35  KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELA--KSCPRV 91
Query: 585 LGFCDEGQNR---LLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDC 639
           +   +  +N    +L+ E+   G + S     L    S N    +  QI  G+ YLH++ 
Sbjct: 92  INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN- 150
Query: 640 SAQIIHCDIKPQNILLDDYY---NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              I+H D+KPQNILL   Y   + +I DFG+++   +  +  +R  I GT  Y+APE  
Sbjct: 151 --NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEIL 205
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               IT   D+++ G++   +++    F
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSPF 233

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 73  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 128
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 189 SKSDVWSFGVLMWEAFS 205

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 581
           E++G GSFG+V +G        T +VAVK  K D + Q +   +F  EV  +    H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +RL G       ++ V E    G+L          FL G L       +  A Q+A G+ 
Sbjct: 78  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVA 692
           YL    S + IH D+  +N+LL      +I DFGL + L  N    +    R     + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE  +  T +   D + FGV L E+ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 31/276 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           +  EE+G G+FG+V++   +T R +    A K +    +  ++  + E+  +    H  L
Sbjct: 54  DIHEELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCS 640
           V L    ++    +++YEF++ G L   +     K S +       Q+ +GL ++HE+  
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 168
Query: 641 AQIIHCDIKPQNILLDDYYN--ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +H D+KP+NI+     +   ++ DFGL   L   QS  + T   GT  + APE    
Sbjct: 169 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 224
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNEKLDDLVEGD 755
             +    D++S GVL   ++S    F  E  +E        DW  D       D    G 
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD-------DSAFSGI 277
Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            E   D   + KL++        DP+ R T+ + L+
Sbjct: 278 SEDGKDF--IRKLLLA-------DPNTRMTIHQALE 304

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 13  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 69
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 125
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA+  
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                    TA   T GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 181 --------HTADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 525 EEVGRGSFGIVYKGVI-LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +E+G G+FG V KG   +     T AV + K +      + E   E  V+ Q  +  +VR
Sbjct: 23  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 83  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 138
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 703 AKVDVYSFGVLLLEIIS 719
           +K DV+SFGVL+ E  S
Sbjct: 199 SKSDVWSFGVLMWEAFS 215

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 13  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 69
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 125
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA+  
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                    TA   T GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 181 --------HTADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQ-DGEKEFKNEVVVIGQTHHKNL 581
           E++G GSFG+V +G        T +VAVK  K D + Q +   +F  EV  +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +RL G       ++ V E    G+L          FL G L       +  A Q+A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK-GYVA 692
           YL    S + IH D+  +N+LL      +I DFGL + L  N    +    R     + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIIS 719
           PE  +  T +   D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 13  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 69
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 125
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA+  
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 180
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                    TA   T GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 181 --------HTADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G +    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 1   GPMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 57
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 113
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 171 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 719 SCRKSF 724
           + R  F
Sbjct: 220 TGRTLF 225

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVR 583
           E VG G++G VYKG        T  +A  K+  V  D E+E K E+ ++ + +HH+N+  
Sbjct: 30  ELVGNGTYGQVYKG----RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 584 LLG-FCDEGQNRL-----LVYEFLNNGTLASFLF---GN-LKPSWNLRTNIAFQIARGLL 633
             G F  +    +     LV EF   G++   +    GN LK  W     I  +I RGL 
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLS 143
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH+    ++IH DIK QN+LL +    ++ DFG++    L+++   R    GT  ++AP
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAP 198
Query: 694 EWFR-----NSTITAKVDVYSFGVLLLEI 717
           E        ++T   K D++S G+  +E+
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEM 227

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   R S   +A+K L +   +    E + + EV +     H N++R
Sbjct: 20  LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L G+  +     L+ E+   GT+   L    +           ++A  L Y H   S ++
Sbjct: 77  LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+LL      +I+DFG     +++   + R  + GT  Y+ PE         
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 704 KVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           KVD++S GVL  E +     F+    +E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQE 217

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V+      T       A+KK D V  D + E     + V+     H  L  +
Sbjct: 26  LGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                  +N   V E+LN G L   +    K   +  T  A +I  GL +LH   S  I+
Sbjct: 85  FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIV 141
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           + D+K  NILLD   + +I+DFG+ K   L  +K       GT  Y+APE          
Sbjct: 142 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAPEILLGQKYNHS 199
Query: 705 VDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 740
           VD +SFGVLL E++  +  F  +  EE  ++I  D  F
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 237

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V+      T       A+KK D V  D + E     + V+     H  L  +
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                  +N   V E+LN G L   +    K   +  T  A +I  GL +LH   S  I+
Sbjct: 84  FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIV 140
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           + D+K  NILLD   + +I+DFG+ K   L  +K       GT  Y+APE          
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAPEILLGQKYNHS 198
Query: 705 VDVYSFGVLLLEIISCRKSFDIEMGEE 731
           VD +SFGVLL E++  +  F  +  EE
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEE 225

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G++    P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 11  GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 67
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            + FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 68  SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 123
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 180
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 181 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 719 SCRKSF 724
           + R  F
Sbjct: 230 TGRTLF 235

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 28/279 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G FG VY+GV    +     VAVK   +    D +++F +E V++    H ++V+L+
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSAQI 643
           G  +E +   ++ E    G L  +L  N K S  + T + +  QI + + YL    S   
Sbjct: 80  GIIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 134
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H DI  +NIL+      ++ DFGL++ +  ++     +  R    +++PE       T 
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 704 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
             DV+ F V + EI+S  K   F +E  +   +L          EK D L + D+     
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRLPKPDL----- 238
Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
             C   L  +   C   DPS RP   +++  L  V ++ 
Sbjct: 239 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 11  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 67
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 123
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA--- 177
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 178 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 17  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 73
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 74  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 129
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA--- 183
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 184 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 28/279 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G FG VY+GV    +     VAVK   +    D +++F +E V++    H ++V+L+
Sbjct: 32  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSAQI 643
           G  +E +   ++ E    G L  +L  N K S  + T + +  QI + + YL    S   
Sbjct: 92  GIIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 146
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H DI  +NIL+      ++ DFGL++ +  ++     +  R    +++PE       T 
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 704 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
             DV+ F V + EI+S  K   F +E  +   +L          EK D L + D+     
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRLPKPDL----- 250
Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
             C   L  +   C   DPS RP   +++  L  V ++ 
Sbjct: 251 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 287

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
           S  L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGL    
Sbjct: 119 SQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E++     F +E+G G FG+V  G           VA+K + +     E EF  E  V+ 
Sbjct: 20  EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMM 74
Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGL 632
              H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     +   +
Sbjct: 75  NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAM 133
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL    S Q +H D+  +N L++D    ++SDFGL++ + L+         +    +  
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSP 189
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE    S  ++K D+++FGVL+ EI S               L    ++ + N +  + +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHI 234
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
              +         EK+  +   C  E    RPT K +L
Sbjct: 235 AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 28/279 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G FG VY+GV    +     VAVK   +    D +++F +E V++    H ++V+L+
Sbjct: 16  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCSAQI 643
           G  +E +   ++ E    G L  +L  N K S  + T + +  QI + + YL    S   
Sbjct: 76  GIIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 130
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H DI  +NIL+      ++ DFGL++ +  ++     +  R    +++PE       T 
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 704 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
             DV+ F V + EI+S  K   F +E  +   +L          EK D L + D+     
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRLPKPDL----- 234
Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
             C   L  +   C   DPS RP   +++  L  V ++ 
Sbjct: 235 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 271

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 44/249 (17%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAV 552
           P    +    P F  +EL +      E       VG G++G V       T+T    VAV
Sbjct: 16  PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAV 72
Query: 553 KKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KKL R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L
Sbjct: 73  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHL 128
Query: 611 FG----NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
            G    N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 185
Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLL 715
           I DFGLA           R       GYVA  W+R   I          VD++S G ++ 
Sbjct: 186 ILDFGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 716 EIISCRKSF 724
           E+++ R  F
Sbjct: 235 ELLTGRTLF 243

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 XQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 44/249 (17%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAV 552
           P    +    P F  +EL +      E       VG G++G V       T+T    VAV
Sbjct: 15  PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAV 71
Query: 553 KKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KKL R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L
Sbjct: 72  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHL 127
Query: 611 FG----NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
            G    N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +
Sbjct: 128 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 184
Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLL 715
           I DFGLA           R       GYVA  W+R   I          VD++S G ++ 
Sbjct: 185 ILDFGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 716 EIISCRKSF 724
           E+++ R  F
Sbjct: 234 ELLTGRTLF 242

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 12  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 68
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 124
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA--- 178
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 179 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 44/249 (17%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAV 552
           P    +    P F  +EL +      E       VG G++G V       T+T    VAV
Sbjct: 16  PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAV 72
Query: 553 KKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KKL R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L
Sbjct: 73  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHL 128
Query: 611 FG----NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
            G    N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 185
Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLL 715
           I DFGLA           R       GYVA  W+R   I          VD++S G ++ 
Sbjct: 186 ILDFGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 716 EIISCRKSF 724
           E+++ R  F
Sbjct: 235 ELLTGRTLF 243

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       +G G++G V       T+T    VAVKKL R FQ  
Sbjct: 11  PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 67
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 123
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA--- 177
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 178 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 44/249 (17%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAV 552
           P    +    P F  +EL +      E       VG G++G V       T+T    VAV
Sbjct: 15  PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAV 71
Query: 553 KKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KKL R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L
Sbjct: 72  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHL 127
Query: 611 FG----NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
            G    N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +
Sbjct: 128 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 184
Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLL 715
           I DFGLA           R       GYVA  W+R   I          VD++S G ++ 
Sbjct: 185 ILDFGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 716 EIISCRKSF 724
           E+++ R  F
Sbjct: 234 ELLTGRTLF 242

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKN 580
            FKE +G G+F  V   V+   + +    AVK +  +  +  E   +NE+ V+ +  H+N
Sbjct: 25  EFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V L    +   +  LV + ++ G L   +      +    + +  Q+   + YLH    
Sbjct: 82  IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR--- 138
Query: 641 AQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             I+H D+KP+N+L    D+     ISDFGL+K+    +   + TA  GT GYVAPE   
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKME--GKGDVMSTAC-GTPGYVAPEVLA 195
Query: 698 NSTITAKVDVYSFGVL 713
               +  VD +S GV+
Sbjct: 196 QKPYSKAVDCWSIGVI 211

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 27/310 (8%)
Query: 497 NSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTST-TAVAVKKL 555
             PGD T+      F  + L++  D     +G G FG V       T   T   VAVK L
Sbjct: 20  QGPGDPTV------FHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL 68
Query: 556 DRVFQDGEKE-FKNEVVVIGQTHHKNLVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFG 612
                   +  +K E+ ++   +H+++++  G C D G   L LV E++  G+L  +L  
Sbjct: 69  KADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-- 126
Query: 613 NLKPSWNLRTNIAF--QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
             + S  L   + F  QI  G+ YLH   +   IH D+  +N+LLD+    +I DFGLAK
Sbjct: 127 -PRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 671 LLTL-NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEM 728
            +   ++   +R        + APE  +        DV+SFGV L E+++ C  S     
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
Query: 729 GEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK 788
             ++  L   A       +L +L+E         KC  ++  +   C + + S RPT + 
Sbjct: 243 --KFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFEN 300
Query: 789 VLQMLEGVVE 798
           ++ +L+ V E
Sbjct: 301 LIPILKTVHE 310

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G+     P F  +EL +      E       VG G++G V       T+T    VAVKKL
Sbjct: 1   GSHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKL 57
Query: 556 DRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG- 612
            R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L G 
Sbjct: 58  SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGA 113
Query: 613 ---NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD 665
              N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D
Sbjct: 114 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEII 718
           FGLA           R       GYVA  W+R   I          VD++S G ++ E++
Sbjct: 171 FGLA-----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 219
Query: 719 SCRKSF 724
           + R  F
Sbjct: 220 TGRTLF 225

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           + +G+G FG V  G     R +  AV   K D   Q     F  E  V+ Q  H NLV+L
Sbjct: 18  QTIGKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 70
Query: 585 LGFCDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG   E +  L +V E++  G+L  +L   G      +     +  +   + YL  +   
Sbjct: 71  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 127
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
             +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++    + APE  R +  
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVK----WTAPEALREAAF 182
Query: 702 TAKVDVYSFGVLLLEIIS 719
           + K DV+SFG+LL EI S
Sbjct: 183 STKSDVWSFGILLWEIYS 200

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 33/292 (11%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVV 571
           E++     F +E+G G FG+V  G           VA+K    + ++G   E EF  E  
Sbjct: 5   EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIK----MIKEGSMSEDEFIEEAK 56
Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIA 629
           V+    H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     + 
Sbjct: 57  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 115
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
             + YL    S Q +H D+  +N L++D    ++SDFGL++ + L+         +    
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVR 171
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           +  PE    S  ++K D+++FGVL+ EI S  K                 ++ + N +  
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSETA 216
Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL 801
           + +   +         EK+  +   C  E    RPT K +L  +  V++ +L
Sbjct: 217 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENL 268

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G VYK        S   VA+K + RV  +GE+        EV ++ +     H
Sbjct: 11  EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL+  C     D      LV+E ++   L ++L     P     T  ++  Q  RG
Sbjct: 66  PNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH +C   I+H D+KP+NIL+      +++DFGLA++ +   + A    +  T  Y 
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA---PVVVTLWYR 178
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    ST    VD++S G +  E+   +  F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 13  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 69
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 125
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 179
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 180 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 12  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 68
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 124
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 178
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 179 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 11  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 67
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 123
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 177
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 178 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 29  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 85
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 86  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 141
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 195
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 196 --------RHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVV 571
           E++     F +E+G G FG+V  G           VA+K    + ++G   E EF  E  
Sbjct: 11  EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIK----MIKEGSMSEDEFIEEAK 62
Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIA 629
           V+    H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     + 
Sbjct: 63  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 121
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
             + YL    S Q +H D+  +N L++D    ++SDFGL++ + L+         +    
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVR 177
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           +  PE    S  ++K D+++FGVL+ EI S               L    ++ + N +  
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 222
Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
           + +   +         EK+  +   C  E    RPT K +L
Sbjct: 223 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 263

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 29  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 85
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 86  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 141
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 195
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 196 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
            F  E+GRGSF  VYKG  L T T+      +  DR     E++ FK E   +    H N
Sbjct: 29  KFDIEIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 581 LVRLLGFCDEGQNR-------LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
           +VR   F D  ++        +LV E   +GTL ++L         +  +   QI +GL 
Sbjct: 87  IVR---FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
           +LH   +  IIH D+K  NI +     + +I D GLA L   + +K    A+ GT  + A
Sbjct: 144 FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPEFXA 198
Query: 693 PEWFRNSTITAKVDVYSFGVLLLE 716
           PE +        VDVY+FG   LE
Sbjct: 199 PEXYEEK-YDESVDVYAFGXCXLE 221

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 11  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 67
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 123
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 124 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 177
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 178 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 5   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 61
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 62  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 117
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 118 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 171
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 172 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 58
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 59  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 114
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 168
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 169 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 3   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 59
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 60  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 115
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 169
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 170 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 58
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 59  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 114
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 168
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 169 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 17  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 73
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 74  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 129
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 183
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 184 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 4   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 60
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 61  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 116
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 117 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 170
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 171 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 579
           E+VG G++G+VYK       +    VA+K   R+  D E E        E+ ++ + HH 
Sbjct: 27  EKVGEGTYGVVYKA----KDSQGRIVALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI-AFQIARGLLYLHED 638
           N+V L+      +   LV+EF+    L   L  N     + +  I  +Q+ RG+ + H+ 
Sbjct: 80  NIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +I+H D+KPQN+L++     +++DFGLA        +A    +R     V   W+R 
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLA--------RAFGIPVRSYTHEVVTLWYRA 187
Query: 699 STI-------TAKVDVYSFGVLLLEIISCRKSF 724
             +       +  VD++S G +  E+I+ +  F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 16  PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 72
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 73  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 128
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 129 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 182
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 183 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 3   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 59
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 60  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 115
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 116 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 169
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 170 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G FG V    +  T        ++K     + GE    NE  ++ + + + +V L  
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA----- 641
           +  E ++ L +   L NG       G+LK          F  AR + Y  E C       
Sbjct: 251 YAYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 642 --QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
             +I++ D+KP+NILLDD+ + RISD GLA  + + + + I+  + GT GY+APE  +N 
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 700 TITAKVDVYSFGVLLLEIISCRKSF 724
             T   D ++ G LL E+I+ +  F
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 579
           E+VG G++G+VYK       +    VA+K   R+  D E E        E+ ++ + HH 
Sbjct: 27  EKVGEGTYGVVYKA----KDSQGRIVALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI-AFQIARGLLYLHED 638
           N+V L+      +   LV+EF+    L   L  N     + +  I  +Q+ RG+ + H+ 
Sbjct: 80  NIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +I+H D+KPQN+L++     +++DFGLA        +A    +R     V   W+R 
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLA--------RAFGIPVRSYTHEVVTLWYRA 187
Query: 699 STI-------TAKVDVYSFGVLLLEIISCRKSF 724
             +       +  VD++S G +  E+I+ +  F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 12  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 68
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 124
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 178
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 179 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 12  PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 68
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 124
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 178
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 179 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G FG V    +  T        ++K     + GE    NE  ++ + + + +V L  
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA----- 641
           +  E ++ L +   L NG       G+LK          F  AR + Y  E C       
Sbjct: 251 YAYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 642 --QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
             +I++ D+KP+NILLDD+ + RISD GLA  + + + + I+  + GT GY+APE  +N 
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 700 TITAKVDVYSFGVLLLEIISCRKSF 724
             T   D ++ G LL E+I+ +  F
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 2   PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 58
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 59  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 114
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 168
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 169 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E +G G FG V+K     T     A  +K   R  +D E E KNE+ V+ Q  H NL++L
Sbjct: 95  EILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKE-EVKNEISVMNQLDHANLIQL 151
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAF--QIARGLLYLHEDCS 640
               +   + +LV E+++ G L   +   +  S+NL     I F  QI  G+ ++H+   
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI---IDESYNLTELDTILFMKQICEGIRHMHQ--- 205
Query: 641 AQIIHCDIKPQNILL--DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
             I+H D+KP+NIL    D    +I DFGLA+     +   +     GT  ++APE    
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNY 262
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC---YRNEKLDDLVEGD 755
             ++   D++S GV+   ++S    F   +G+  A   +    C     +E+  D+ E  
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPF---LGDNDAETLNNILACRWDLEDEEFQDISEEA 319
Query: 756 MEALNDIKCVEK 767
            E ++ +   EK
Sbjct: 320 KEFISKLLIKEK 331

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +G GS+G   K      R S   + V K+LD     + EK+   +EV ++ +  H N+VR
Sbjct: 14  IGTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 584 LLGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
                 +  N  L  V E+   G LAS +    K    L      ++   L    ++C  
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 642 Q------IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           +      ++H D+KP N+ LD   N ++ DFGLA++  LN   +   A  GT  Y++PE 
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQ 187
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +   K D++S G LL E+ +    F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 39/284 (13%)
Query: 515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVV 571
           E++     F +E+G G FG+V  G           VA+K    + ++G   E EF  E  
Sbjct: 4   EIDPKDLTFLKELGTGQFGVVKYG----KWRGQYDVAIK----MIKEGSMSEDEFIEEAK 55
Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIA 629
           V+    H+ LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     + 
Sbjct: 56  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 114
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK- 688
             + YL    S Q +H D+  +N L++D    ++SDFGL++ +  ++     T+  G+K 
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKF 167
Query: 689 --GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
              +  PE    S  ++K D+++FGVL+ EI S               L    ++ + N 
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNS 212
Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
           +  + +   +         EK+  +   C  E    RPT K +L
Sbjct: 213 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 256

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           + +G+G FG V  G     R +  AV   K D   Q     F  E  V+ Q  H NLV+L
Sbjct: 27  QTIGKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 79
Query: 585 LGFCDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG   E +  L +V E++  G+L  +L   G      +     +  +   + YL  +   
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
             +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++ T    APE  R    
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVKWT----APEALREKKF 191
Query: 702 TAKVDVYSFGVLLLEIIS 719
           + K DV+SFG+LL EI S
Sbjct: 192 STKSDVWSFGILLWEIYS 209

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           + E+GRG+  IVY+      + +    A+K L +     +K  + E+ V+ +  H N+++
Sbjct: 58  ESELGRGATSIVYR---CKQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIK 112
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L    +      LV E +  G L   +      S     +   QI   + YLHE+    I
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GI 169
Query: 644 IHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           +H D+KP+N+L          +I+DFGL+K++   + + +   + GT GY APE  R   
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 732
              +VD++S G++   ++   + F  E G+++
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           + +G+G FG V  G     R +  AV   K D   Q     F  E  V+ Q  H NLV+L
Sbjct: 199 QTIGKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 251
Query: 585 LGFCDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG   E +  L +V E++  G+L  +L   G      +     +  +   + YL  +   
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 308
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
             +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++ T    APE  R    
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVKWT----APEALREKKF 363
Query: 702 TAKVDVYSFGVLLLEIIS 719
           + K DV+SFG+LL EI S
Sbjct: 364 STKSDVWSFGILLWEIYS 381

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
           E++G G++G V+K      R +   VA+K++ R+  D E        E+ ++ +  HKN+
Sbjct: 8   EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASF--LFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           VRL       +   LV+EF +      F    G+L P   +  +  FQ+ +GL + H   
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  ++H D+KPQN+L++     +++DFGLA        +A    +R     V   W+R  
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLA--------RAFGIPVRCYSAEVVTLWYRPP 170
Query: 700 TI-------TAKVDVYSFGVLLLEIISCRKSF 724
            +       +  +D++S G +  E+ +  +  
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 87  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 140
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 201 THQSDVWSYGVTVWELMT 218

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNEVVVIGQTHHKNL 581
           FK ++G G+FG V+   ++  R+S     +K +++   Q   ++ + E+ V+    H N+
Sbjct: 26  FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYLHE 637
           +++    ++  N  +V E    G L   +         L       +  Q+   L Y H 
Sbjct: 83  IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH- 141
Query: 638 DCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
             S  ++H D+KP+NIL  D   +   +I DFGLA+L    +S    T   GT  Y+APE
Sbjct: 142 --SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAGTALYMAPE 196
Query: 695 WFRNSTITAKVDVYSFGVLL 714
            F+   +T K D++S GV++
Sbjct: 197 VFKRD-VTFKCDIWSAGVVM 215

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 57/290 (19%)
Query: 524 KEEVGRGSFG-IVYKGVILTTRTSTTAVAVKK-LDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           K+ +G G+ G IVY+G+          VAVK+ L   F   ++E +   ++     H N+
Sbjct: 29  KDVLGHGAEGTIVYRGMF-----DNRDVAVKRILPECFSFADREVQ---LLRESDEHPNV 80
Query: 582 VRLLGFCDEGQNRLLVYEF-LNNGTLASFL----FGNL--KPSWNLRTNIAFQIARGLLY 634
           +R   FC E   +       L   TL  ++    F +L  +P   L+     Q   GL +
Sbjct: 81  IRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ-----QTTSGLAH 133
Query: 635 LHEDCSAQIIHCDIKPQNILLD-----DYYNARISDFGLAKLLTL-NQSKAIRTAIRGTK 688
           LH   S  I+H D+KP NIL+          A ISDFGL K L +   S + R+ + GT+
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 689 GYVAPEWF-----RNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDW-AFD 741
           G++APE        N T T  VD++S G +   +IS     F   +  +  IL    + D
Sbjct: 191 GWIAPEMLSEDCKENPTYT--VDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD 248
Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           C   EK +D++  ++        +EK++ +       DP  RP+ K VL+
Sbjct: 249 CLHPEKHEDVIAREL--------IEKMIAM-------DPQKRPSAKHVLK 283

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 86  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 200 THQSDVWSYGVTVWELMT 217

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 84  LGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 137
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 198 THQSDVWSYGVTVWELMT 215

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D+GLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           + +G+G FG V  G     R +  AV   K D   Q     F  E  V+ Q  H NLV+L
Sbjct: 12  QTIGKGEFGDVMLG---DYRGNKVAVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 64
Query: 585 LGFCDEGQNRL-LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG   E +  L +V E++  G+L  +L   G      +     +  +   + YL  +   
Sbjct: 65  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 121
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
             +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++ T    APE  R    
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVKWT----APEALREKKF 176
Query: 702 TAKVDVYSFGVLLLEIIS 719
           + K DV+SFG+LL EI S
Sbjct: 177 STKSDVWSFGILLWEIYS 194

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 84  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 137
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 198 THQSDVWSYGVTVWELMT 215

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 39/277 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHH 578
            F +E+G G FG+V  G           VA+K    + ++G   E EF  E  V+    H
Sbjct: 7   TFLKELGTGQFGVVKYG----KWRGQYDVAIK----MIKEGSMSEDEFIEEAKVMMNLSH 58
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLH 636
           + LV+L G C + +   ++ E++ NG L ++L   ++  +  +  +     +   + YL 
Sbjct: 59  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK---GYVAP 693
              S Q +H D+  +N L++D    ++SDFGL++ +  ++     T+  G+K    +  P
Sbjct: 118 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPP 170
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
           E    S  ++K D+++FGVL+ EI S               L    ++ + N +  + + 
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHIA 215
Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
             +         EK+  +   C  E    RPT K +L
Sbjct: 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 252

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 83  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA+  
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-- 173
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSF 724
               +    T    T+ Y APE   N       VD++S G ++ E+++ R  F
Sbjct: 174 ---HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 24/268 (8%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K L +       KE  +E  V+       + RL
Sbjct: 25  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDCSAQ 642
           LG C     +L V + +  G L   +  N     S +L  N   QIA+G+ YL +    +
Sbjct: 85  LGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDL-LNWCMQIAKGMSYLED---VR 139
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           ++H D+  +N+L+    + +I+DFGLA+LL +++++      +    ++A E       T
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
            + DV+S+GV + E+++                    +D     ++ DL+E         
Sbjct: 200 HQSDVWSYGVTVWELMTFGAK---------------PYDGIPAREIPDLLEKGERLPQPP 244
Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
            C   + M+ + C   D   RP  ++++
Sbjct: 245 ICTIDVYMIMVKCWMIDSECRPRFRELV 272

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 48  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 161
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 222 THQSDVWSYGVTVWELMT 239

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 85  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 29  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 89  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 142
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 203 THQSDVWSYGVTVWELMT 220

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V     +    S   +AVKKL R FQ  
Sbjct: 35  PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVK---SGLKIAVKKLSRPFQSI 91
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL       +     E  N+  L + L G    N+  
Sbjct: 92  IHAKRTYRELRLLKHMKHENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVK 147
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 201
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 202 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 200 THQSDVWSYGVTVWELMT 217

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 200 THQSDVWSYGVTVWELMT 217

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E +G+G FG VY G          A+ +  ++R  +D  K FK EV+   QT H+N+V  
Sbjct: 39  ELIGKGRFGQVYHG----RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           +G C    +  ++       TL S +    +    N    IA +I +G+ YLH   +  I
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG---YVAPEWFRNST 700
           +H D+K +N+  D+     I+DFGL  +  + Q+      +R   G   ++APE  R  +
Sbjct: 152 LHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 701 ---------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
                     +   DV++ G +  E+ +    F  +  E  AI+  W         L  +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AII--WQMGTGMKPNLSQI 266
Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
             G  + ++DI       ++  W  +++   RPT  K++ MLE
Sbjct: 267 GMG--KEISDI-------LLFCWAFEQEE--RPTFTKLMDMLE 298

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 200 THQSDVWSYGVTVWELMT 217

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKNEVVVIGQTHHKN 580
           F E +G G+F  V+   ++  R +    A+K + +   F+D   E  NE+ V+ +  H+N
Sbjct: 13  FMEVLGSGAFSEVF---LVKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHEN 67
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V L    +   +  LV + ++ G L   +      +    + +  Q+   + YLHE+  
Sbjct: 68  IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-- 125
Query: 641 AQIIHCDIKPQNIL-LDDYYNARI--SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             I+H D+KP+N+L L    N++I  +DFGL+K+    +   I +   GT GYVAPE   
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLA 180
Query: 698 NSTITAKVDVYSFGVL 713
               +  VD +S GV+
Sbjct: 181 QKPYSKAVDCWSIGVI 196

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 83  LGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 90  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 143
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 204 THQSDVWSYGVTVWELMT 221

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 16/281 (5%)
Query: 526 EVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           ++G G FG V       T   T   VAVK L        +  +K E+ ++   +H+++++
Sbjct: 21  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 584 LLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 639
             G C D+G+  L LV E++  G+L  +L    + S  L   + F  QI  G+ YLH   
Sbjct: 81  YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH--- 134
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWFRN 698
           S   IH ++  +N+LLD+    +I DFGLAK +   ++   +R        + APE  + 
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 699 STITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
                  DV+SFGV L E+++ C  S       ++  L   A       +L +L+E    
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQGQMTVLRLTELLERGER 252
Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                KC  ++  +   C + + S RPT + ++ +L+ V E
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       G+VA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       G+VA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 58
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 59  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 114
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA   
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA--- 168
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       G+VA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 169 --------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 33  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 93  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 146
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 207 THQSDVWSYGVTVWELMT 224

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +G+GSFG V   ++   + +    AVK + +  V Q  +KE    EV ++ Q  H N+ +
Sbjct: 34  LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L  F ++     LV E    G L   +    + S      I  Q+  G+ Y H++   +I
Sbjct: 91  LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KI 147
Query: 644 IHCDIKPQNILLDDY---YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           +H D+KP+N+LL+      N RI DFGL+       SK  +  I GT  Y+APE   + T
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKI-GTAYYIAPEVL-HGT 203
Query: 701 ITAKVDVYSFGVLLLEIIS 719
              K DV+S GV+L  ++S
Sbjct: 204 YDEKCDVWSTGVILYILLS 222

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V        R     VAVKKL R FQ     +    E+ ++    H+N++ L
Sbjct: 36  VGSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCS 640
           L       +     E     TL      N+  S  L       + +Q+ RGL Y+H   S
Sbjct: 93  LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---S 149
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           A IIH D+KP N+ +++    RI DFGLA           R A     GYVA  W+R   
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 198
Query: 701 IT-------AKVDVYSFGVLLLEIISCRKSF 724
           I          VD++S G ++ E++  +  F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 15/210 (7%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQ 575
           D+F+    +G+G FG VY   +   + S   VA+K L   ++ ++G E + + E+ +   
Sbjct: 23  DDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
            HH N++RL  +  + +   L+ E+   G L   L  +          I  ++A  L+Y 
Sbjct: 80  LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H     ++IH DIKP+N+LL      +I+DFG     +++     R  + GT  Y+ PE 
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEM 192
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
                   KVD++  GVL  E++     F+
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 77  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 130
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 191 THQSDVWSYGVTVWELMT 208

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G VYK        S   VA+K + RV  +GE+        EV ++ +     H
Sbjct: 11  EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL+  C     D      LV+E ++   L ++L     P     T  ++  Q  RG
Sbjct: 66  PNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH +C   I+H D+KP+NIL+      +++DFGLA++ +   +      +  T  Y 
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---DPVVVTLWYR 178
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    ST    VD++S G +  E+   +  F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G GSFG V      TT        + K      D +   + E+  +    H ++++L  
Sbjct: 22  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
                   ++V E+  N  L  ++    K S         QI   + Y H     +I+H 
Sbjct: 82  VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHR 137
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA-KV 705
           D+KP+N+LLD++ N +I+DFGL+ ++T      ++T+  G+  Y APE          +V
Sbjct: 138 DLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 194
Query: 706 DVYSFGVLLLEIISCRKSFDIE 727
           DV+S GV+L  ++  R  FD E
Sbjct: 195 DVWSCGVILYVMLCRRLPFDDE 216

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLEDR--- 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +++G GSFG   K +++ +        +K+++  R+     +E + EV V+    H N+V
Sbjct: 30  QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA- 641
           +     +E  +  +V ++   G L   +        N +  + FQ  + L +  + C A 
Sbjct: 87  QYRESFEENGSLYIVMDYCEGGDLFKRI--------NAQKGVLFQEDQILDWFVQICLAL 138
Query: 642 ------QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
                 +I+H DIK QNI L      ++ DFG+A++L  N +  +  A  GT  Y++PE 
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEI 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
             N     K D+++ G +L E+ + + +F+
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE 226

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G GSFG V      TT        + K      D +   + E+  +    H ++++L  
Sbjct: 21  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
                   ++V E+  N  L  ++    K S         QI   + Y H     +I+H 
Sbjct: 81  VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHR 136
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA-KV 705
           D+KP+N+LLD++ N +I+DFGL+ ++T      ++T+  G+  Y APE          +V
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 193
Query: 706 DVYSFGVLLLEIISCRKSFDIE 727
           DV+S GV+L  ++  R  FD E
Sbjct: 194 DVWSCGVILYVMLCRRLPFDDE 215

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 517 EEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-----EFKNE 569
           E+  D+++  EE+G G F IV K     T     A  +KK  R      +     E + E
Sbjct: 8   EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIERE 65
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           V ++ +  H N++ L    +   + +L+ E ++ G L  FL      + +  T    QI 
Sbjct: 66  VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARIS--DFGLA-KLLTLNQSKAIRTAI 684
            G+ YLH   S +I H D+KP+NI+L D    N RI   DFG+A K+   N+ K I    
Sbjct: 126 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--- 179
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
            GT  +VAPE      +  + D++S GV+   ++S    F  E  +E
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G GSFG V      TT        + K      D +   + E+  +    H ++++L  
Sbjct: 16  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
                   ++V E+  N  L  ++    K S         QI   + Y H     +I+H 
Sbjct: 76  VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHR 131
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA-KV 705
           D+KP+N+LLD++ N +I+DFGL+ ++T      ++T+  G+  Y APE          +V
Sbjct: 132 DLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 188
Query: 706 DVYSFGVLLLEIISCRKSFDIE 727
           DV+S GV+L  ++  R  FD E
Sbjct: 189 DVWSCGVILYVMLCRRLPFDDE 210

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +G GS+G   K      R S   + V K+LD     + EK+   +EV ++ +  H N+VR
Sbjct: 14  IGTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 584 LLGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
                 +  N  L  V E+   G LAS +    K    L      ++   L    ++C  
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 642 Q------IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           +      ++H D+KP N+ LD   N ++ DFGLA++  LN   +      GT  Y++PE 
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQ 187
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +   K D++S G LL E+ +    F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G GSFG V      TT        + K      D +   + E+  +    H ++++L  
Sbjct: 12  LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
                   ++V E+  N  L  ++    K S         QI   + Y H     +I+H 
Sbjct: 72  VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHR 127
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA-KV 705
           D+KP+N+LLD++ N +I+DFGL+ ++T      ++T+  G+  Y APE          +V
Sbjct: 128 DLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 184
Query: 706 DVYSFGVLLLEIISCRKSFDIE 727
           DV+S GV+L  ++  R  FD E
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDE 206

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 34/227 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHH 578
            +  ++G G+FG V++     L      T VAVK L +    D + +F+ E  ++ +  +
Sbjct: 50  EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-----------SWNLRTN---- 623
            N+V+LLG C  G+   L++E++  G L  FL  ++ P           S   R +    
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL-RSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 624 ----------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-LL 672
                     IA Q+A G+ YL E    + +H D+  +N L+ +    +I+DFGL++ + 
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           + +  KA        + ++ PE    +  T + DV+++GV+L EI S
Sbjct: 226 SADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 522 NFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           NF+ E  +GRG F  VY+   L          V+  D +      +   E+ ++ Q +H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF--QIARGLLYL 635
           N+++      E     +V E  + G L+  +  F   K     RT   +  Q+   L ++
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S +++H DIKP N+ +      ++ D GL +  +   + A   ++ GT  Y++PE 
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPER 207
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
              +    K D++S G LL E+ + +  F  +    Y++       C + E      + D
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-------CKKIE------QCD 254
Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
              L      E+L  +   CI  DP  RP +  V
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPAFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAV-KKLDR-VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +G GS+G   K      R S   + V K+LD     + EK+   +EV ++ +  H N+VR
Sbjct: 14  IGTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 584 LLGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
                 +  N  L  V E+   G LAS +    K    L      ++   L    ++C  
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 642 Q------IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           +      ++H D+KP N+ LD   N ++ DFGLA++  LN  +       GT  Y++PE 
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQ 187
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +   K D++S G LL E+ +    F
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPF 216

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 106/249 (42%), Gaps = 44/249 (17%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAV 552
           P    +    P F  +EL +      E       VG G++G V       T+T    VAV
Sbjct: 16  PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAV 72
Query: 553 KKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL 610
           KKL R FQ     K    E+ ++    H+N++ LL      ++     E  N+  L + L
Sbjct: 73  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHL 128
Query: 611 FG----NLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
            G    N+     L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +
Sbjct: 129 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 185
Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLL 715
           I DFGLA           R       G VA  W+R   I          VD++S G ++ 
Sbjct: 186 ILDFGLA-----------RHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 716 EIISCRKSF 724
           E+++ R  F
Sbjct: 235 ELLTGRTLF 243

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK----NEVVVIGQTH---H 578
           E+G G++G VYK        S   VA+K + RV  +GE+        EV ++ +     H
Sbjct: 11  EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 579 KNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            N+VRL+  C     D      LV+E ++   L ++L     P     T  ++  Q  RG
Sbjct: 66  PNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L +LH +C   I+H D+KP+NIL+      +++DFGLA++ +   +      +  T  Y 
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---FPVVVTLWYR 178
Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           APE    ST    VD++S G +  E+   +  F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 16/281 (5%)
Query: 526 EVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           ++G G FG V       T   T   VAVK L        +  +K E+ ++   +H+++++
Sbjct: 21  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 584 LLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDC 639
             G C D+G+  L LV E++  G+L  +L    + S  L   + F  QI  G+ YLH   
Sbjct: 81  YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH--- 134
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWFRN 698
           +   IH ++  +N+LLD+    +I DFGLAK +   ++   +R        + APE  + 
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 699 STITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
                  DV+SFGV L E+++ C  S       ++  L   A       +L +L+E    
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIAQGQMTVLRLTELLERGER 252
Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                KC  ++  +   C + + S RPT + ++ +L+ V E
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 20  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA G+ YL +    
Sbjct: 80  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAEGMNYLED---R 133
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 194 THQSDVWSYGVTVWELMT 211

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 188
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V K      R +    AVK +++     +       EV ++ +  H N+++L
Sbjct: 30  LGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
               ++  +  +V E    G L   +    + S +    I  Q+  G+ Y+H+     I+
Sbjct: 87  FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 645 HCDIKPQNILLDDYY---NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H D+KP+NILL+      + +I DFGL+     N     R    GT  Y+APE  R  T 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVLRG-TY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
             K DV+S GV+L  ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V K      R +    AVK +++     +       EV ++ +  H N+++L
Sbjct: 30  LGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
               ++  +  +V E    G L   +    + S +    I  Q+  G+ Y+H+     I+
Sbjct: 87  FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 645 HCDIKPQNILLDDYY---NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H D+KP+NILL+      + +I DFGL+     N     R    GT  Y+APE  R  T 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVLRG-TY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
             K DV+S GV+L  ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + +   +A+K L   ++ ++G E + + E+ +     H N++R
Sbjct: 23  LGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           +  +  + +   L+ EF   G L   L  + +           ++A  L Y HE    ++
Sbjct: 80  MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKV 136
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+L+      +I+DFG     +++     R  + GT  Y+ PE     T   
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 704 KVDVYSFGVLLLEIISCRKSFD 725
           KVD++  GVL  E +     FD
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFD 214

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 188
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLVR 583
           +G+GSFG   K  I+    +    A+K +++       E +N   E+ ++    H  LV 
Sbjct: 23  IGKGSFG---KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     + ++  +V + L  G L   L  N+            ++   L YL    + +I
Sbjct: 80  LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRI 136
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF---RNST 700
           IH D+KP NILLD++ +  I+DF +A +L     +   T + GTK Y+APE F   + + 
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDI 726
            +  VD +S GV   E++  R+ + I
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHI 219

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDG-EKEFKNEVVVIGQTHHKNLVR 583
           +G+G FG VY   +   + +   +A+K L   ++ ++G E + + E+ +     H N++R
Sbjct: 22  LGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           +  +  + +   L+ EF   G L   L  + +           ++A  L Y HE    ++
Sbjct: 79  MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKV 135
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           IH DIKP+N+L+      +I+DFG     +++     R  + GT  Y+ PE     T   
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 704 KVDVYSFGVLLLEIISCRKSFD 725
           KVD++  GVL  E +     FD
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFD 213

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
           E++G G++G V+K      R +   VA+K++ R+  D E        E+ ++ +  HKN+
Sbjct: 8   EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASF--LFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           VRL       +   LV+EF +      F    G+L P   +  +  FQ+ +GL + H   
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  ++H D+KPQN+L++     ++++FGLA        +A    +R     V   W+R  
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLA--------RAFGIPVRCYSAEVVTLWYRPP 170
Query: 700 TI-------TAKVDVYSFGVLLLEI 717
            +       +  +D++S G +  E+
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAEL 195

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V K      R +    AVK +++     +       EV ++ +  H N+++L
Sbjct: 30  LGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
               ++  +  +V E    G L   +    + S +    I  Q+  G+ Y+H+     I+
Sbjct: 87  FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 645 HCDIKPQNILLDDYY---NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H D+KP+NILL+      + +I DFGL+     N     R    GT  Y+APE  R  T 
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVLRG-TY 199
Query: 702 TAKVDVYSFGVLLLEIIS 719
             K DV+S GV+L  ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHK 579
            +E +G GSFG   K  + T   +   VA+K + R      D     + E+  +    H 
Sbjct: 13  IRETLGEGSFG---KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           ++++L        + ++V E+   G L  ++    + + +       QI   + Y H   
Sbjct: 70  HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
             +I+H D+KP+N+LLDD  N +I+DFGL+ ++T      ++T+  G+  Y APE   N 
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVI-NG 181
Query: 700 TITA--KVDVYSFGVLLLEIISCRKSFDIE 727
            + A  +VDV+S G++L  ++  R  FD E
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I  FGLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D GLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G G+FG V  G       +   VAVK L+R      D   + + E+  +    H ++++
Sbjct: 24  LGVGTFGKVKVG---KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L        +  +V E+++ G L  ++  N +        +  QI  G+ Y H      +
Sbjct: 81  LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMV 137
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           +H D+KP+N+LLD + NA+I+DFGL+ +++    + +R +  G+  Y APE         
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSC-GSPNYAAPEVISGRLYAG 194
Query: 704 -KVDVYSFGVLLLEIISCRKSFD 725
            +VD++S GV+L  ++     FD
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFD 217

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 14/215 (6%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 577
           NF   +G+GSFG     V+L  R  T    A+ + K D V QD + E    E  V+    
Sbjct: 22  NFLMVLGKGSFG----KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 578 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
               +  L  C +  +RL  V E++N G L   +    K         A +I+ GL +LH
Sbjct: 78  KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
           +     II+ D+K  N++LD   + +I+DFG+ K   ++          GT  Y+APE  
Sbjct: 138 K---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEII 192
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                   VD +++GVLL E+++ +  FD E  +E
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F IV K    +T     A  +KK   R  + G   +E + EV ++ Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E ++ G L  FL      S    T+   QI  G+ YLH   + 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 642 QIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
           +I H D+KP+NI+L D      + ++ DFGLA  +   +       I GT  +VAPE   
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +  + D++S GV+   ++S    F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 500 GDGTIETNLPCFSYKELEEATDNFKEEV----GRGSFGIVYKGVILTTRTSTTAVAVKKL 555
           G G+I+        KE  E  D  + E+    G+GSFG V+    ++   +    A+K L
Sbjct: 1   GMGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60
Query: 556 --------DRVFQDGEKEFKNEVVVIGQTHHKNLVRL-LGFCDEGQNRLLVYEFLNNGTL 606
                   DRV    E++      ++ + +H  +V+L   F  EG+   L+ +FL  G L
Sbjct: 61  KKATLKVRDRVRTKMERD------ILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDL 113
Query: 607 ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF 666
            + L    K       ++ F +A   L L    S  II+ D+KP+NILLD+  + +++DF
Sbjct: 114 FTRLS---KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           GL+K    ++ KA   +  GT  Y+APE       T   D +SFGVL+ E+++
Sbjct: 171 GLSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD----GEKEFKNEVVVIGQTHHKN 580
           EE+G G F IV K     T     A  +KK  R+         +E + EV ++ +  H N
Sbjct: 32  EELGSGQFAIVRKCRQKGTGKEYAAKFIKK-RRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           ++ L    +   + +L+ E ++ G L  FL      + +  T    QI  G+ YLH   S
Sbjct: 91  IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---S 147
Query: 641 AQIIHCDIKPQNILLDD--YYNARIS--DFGLA-KLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +I H D+KP+NI+L D    N RI   DFG+A K+   N+ K I     GT  +VAPE 
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAPEI 203
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                +  + D++S GV+   ++S    F  E  +E
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 564 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 623
           +E  NE+ ++    H N+++L    ++ +   LV EF   G L   +    K       N
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKLLTLNQSKAI 680
           I  QI  G+ YLH+     I+H DIKP+NILL++     N +I DFGL+   +  +   +
Sbjct: 151 IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKL 205
Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF----------DIEMGE 730
           R  + GT  Y+APE  +      K DV+S GV++  ++     F           +E G+
Sbjct: 206 RDRL-GTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK 263
Query: 731 EYAILTDW 738
            Y    DW
Sbjct: 264 YYFDFNDW 271

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD ++  E++G+G+F +V + V L T     A  +       +D +K  + E  +     
Sbjct: 3   TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N+VRL     E     LV++ +  G L   +      S    ++   QI   +L+ H+
Sbjct: 62  HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 638 DCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
                ++H D+KP+N+LL         +++DFGLA  +  +Q      A  GT GY++PE
Sbjct: 122 ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 695 WFRNSTITAKVDVYSFGVLL 714
             R       VD+++ GV+L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EK 564
           +  F  +++E+  D   EE+G G F IV K    +T     A  +KK   R  + G   +
Sbjct: 2   METFKQQKVEDFYD-IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 624
           E + EV ++ Q  H N++ L    +   + +L+ E ++ G L  FL      S    T+ 
Sbjct: 61  EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAI 680
             QI  G+ YLH   + +I H D+KP+NI+L D      + ++ DFGLA  +   +    
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVE 174
Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
              I GT  +VAPE      +  + D++S GV+   ++S
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 113/232 (48%), Gaps = 25/232 (10%)
Query: 501 DGTIETNLPCFSYKELEEATDNFKEEV----GRGSFGIVYKGVILTTRTSTTAVAVKKL- 555
           +G+I+        KE  E  D  + E+    G+GSFG V+    ++   +    A+K L 
Sbjct: 2   EGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK 61
Query: 556 -------DRVFQDGEKEFKNEVVVIGQTHHKNLVRL-LGFCDEGQNRLLVYEFLNNGTLA 607
                  DRV    E++      ++ + +H  +V+L   F  EG+   L+ +FL  G L 
Sbjct: 62  KATLKVRDRVRTKMERD------ILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLF 114
Query: 608 SFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG 667
           + L    K       ++ F +A   L L    S  II+ D+KP+NILLD+  + +++DFG
Sbjct: 115 TRL---SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           L+K    ++ KA   +  GT  Y+APE       T   D +SFGVL+ E+++
Sbjct: 172 LSKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 530 GSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 587
           G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RLLG 
Sbjct: 33  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 588 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    +++
Sbjct: 93  CLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   T +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 705 VDVYSFGVLLLEIIS 719
            DV+S+GV + E+++
Sbjct: 207 SDVWSYGVTVWELMT 221

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNE--VVVIGQ 575
           DN K  E +GRG +G VYKG +         VAVK    VF    ++ F NE  +  +  
Sbjct: 13  DNLKLLELIGRGRYGAVYKGSL-----DERPVAVK----VFSFANRQNFINEKNIYRVPL 63
Query: 576 THHKNLVRLLG-----FCDEGQNRLLVYEFLNNGTLASFLFGNLKPS-WNLRTNIAFQIA 629
             H N+ R +        D     LLV E+  NG+L  +L  +L  S W     +A  + 
Sbjct: 64  MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVT 121
Query: 630 RGLLYLHEDC------SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ----SKA 679
           RGL YLH +          I H D+  +N+L+ +     ISDFGL+  LT N+     + 
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 680 IRTAIR--GTKGYVAPEWFRNS-------TITAKVDVYSFGVLLLEI-ISCRKSFDIEMG 729
              AI   GT  Y+APE    +       +   +VD+Y+ G++  EI + C   F  E  
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
Query: 730 EEYAI 734
            EY +
Sbjct: 242 PEYQM 246

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-----EFKNEVVVIGQTHHK 579
           EE+G G F IV K     T     A  +KK  R      +     E + EV ++ +  H 
Sbjct: 11  EELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           N++ L    +   + +L+ E ++ G L  FL      + +  T    QI  G+ YLH   
Sbjct: 69  NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH--- 125
Query: 640 SAQIIHCDIKPQNILLDD--YYNARIS--DFGLA-KLLTLNQSKAIRTAIRGTKGYVAPE 694
           S +I H D+KP+NI+L D    N RI   DFG+A K+   N+ K I     GT  +VAPE
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF----GTPEFVAPE 181
Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                 +  + D++S GV+   ++S    F  E  +E
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT--------- 576
           E+G G++G VYK        S   VA+K + RV   G       +  + +          
Sbjct: 16  EIGVGAYGTVYKA---RDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAF 71
Query: 577 HHKNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIA 629
            H N+VRL+  C     D      LV+E ++   L ++L     P     T  ++  Q  
Sbjct: 72  EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           RGL +LH +C   I+H D+KP+NIL+      +++DFGLA++ +   +    T +  T  
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---TPVVVTLW 184
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           Y APE    ST    VD++S G +  E+   +  F
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D GLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD +  KE++G GS+ +  + +    + +    AVK +D+  +D  +E +   +++    
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCI---HKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N++ L    D+G+   +V E +  G L   +      S    + + F I + + YLH 
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 638 DCSAQIIHCDIKPQNIL-LDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
             +  ++H D+KP NIL +D+  N    RI DFG AK L       +      T  +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAP 189
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           E        A  D++S GVLL  +++    F
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-NEVVVIGQ 575
             DNF+    +G+GSFG V    +  T     AV V K D + QD + E    E  ++  
Sbjct: 21  GIDNFEFIRVLGKGSFGKVMLARVKET-GDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 576 THHKNLVRLLGFCDEGQNRLL-VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
             +   +  L  C +  +RL  V EF+N G L   +  + +         A +I   L++
Sbjct: 80  ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAP 693
           LH+     II+ D+K  N+LLD   + +++DFG+ K    N    + TA   GT  Y+AP
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTTATFCGTPDYIAP 193
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 737
           E  +       VD ++ GVLL E++     F+ E  ++   AIL D
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I DF LA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F +V K    +T     A  +KK   +  + G   ++ + EV ++ +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E +  G L  FL      +    T    QI  G+ YLH   S 
Sbjct: 77  ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 642 QIIHCDIKPQNILLDDYY----NARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWF 696
           QI H D+KP+NI+L D        +I DFGLA  +   N+ K     I GT  +VAPE  
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIV 189
Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSF 724
               +  + D++S GV+   ++S    F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 26/210 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVR 583
           +++G G++  VYKG    ++ +   VA+K++    ++G       EV ++    H N+V 
Sbjct: 8   DKLGEGTYATVYKG---KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L       ++  LV+E+L+   L  +L   GN+    N++  + FQ+ RGL Y H     
Sbjct: 65  LHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQ--- 119
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+KPQN+L+++    +++DFGLA+      +K+I T     +  V   W+R   I
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNE--VVTLWYRPPDI 171
Query: 702 -------TAKVDVYSFGVLLLEIISCRKSF 724
                  + ++D++  G +  E+ + R  F
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F IV K    +T     A  +KK   R  + G   +E + EV ++ Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E ++ G L  FL      S    T+   QI  G+ YLH   + 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 642 QIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
           +I H D+KP+NI+L D      + ++ DFGLA  +   +       I GT  +VAPE   
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +  + D++S GV+   ++S    F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L++ + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 87  LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 140
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 201 THQSDVWSYGVTVWELMT 218

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVR 583
            VG G++G V   +    + S   VA+KKL R FQ     K    E++++    H+N++ 
Sbjct: 31  HVGSGAYGSVCSAI---DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGLLYLHE 637
           LL       +    Y+F     +  F+  +L+    L+ +      + +Q+ +GL Y+H 
Sbjct: 88  LLDVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH- 143
Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             SA ++H D+KP N+ +++    +I DFGLA           R A     GYV   W+R
Sbjct: 144 --SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYR 190
Query: 698 NSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
              +          VD++S G ++ E+++ +  F
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT R     VA+K +D+   +    +K F+ EV ++   +H N+V
Sbjct: 23  IGKGNFAKVKLARHILTGRE----VAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 77
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   L+ E+ + G +  +L  + +       +   QI   + Y H+    +
Sbjct: 78  KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KR 134
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T+        A  G   Y APE F+     
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYD 191
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 509 PCFSYKELEEATDNFKEE------VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD- 561
           P F  +EL +      E       VG G++G V       T+T    VAVKKL R FQ  
Sbjct: 6   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLR-VAVKKLSRPFQSI 62
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG----NLKP 616
              K    E+ ++    H+N++ LL      ++     E  N+  L + L G    N+  
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVK 118
Query: 617 SWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL 672
              L  +    + +QI RGL Y+H   SA IIH D+KP N+ +++    +I D GLA   
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA--- 172
Query: 673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
                   R       GYVA  W+R   I          VD++S G ++ E+++ R  F
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F IV K    +T     A  +KK   R  + G   +E + EV ++ Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E ++ G L  FL      S    T+   QI  G+ YLH   + 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 642 QIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
           +I H D+KP+NI+L D      + ++ DFGLA  +   +       I GT  +VAPE   
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +  + D++S GV+   ++S    F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F IV K    +T     A  +KK   R  + G   +E + EV ++ Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E ++ G L  FL      S    T+   QI  G+ YLH   + 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 642 QIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
           +I H D+KP+NI+L D      + ++ DFGLA  +   +       I GT  +VAPE   
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +  + D++S GV+   ++S    F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDG--EKEFKNEVVVIGQTHHKNL 581
           EE+G G F IV K    +T     A  +KK   R  + G   +E + EV ++ Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           + L    +   + +L+ E ++ G L  FL      S    T+   QI  G+ YLH   + 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 642 QIIHCDIKPQNILLDD----YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
           +I H D+KP+NI+L D      + ++ DFGLA  +   +       I GT  +VAPE   
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF 724
              +  + D++S GV+   ++S    F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 85  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 530 GSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 587
           G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RLLG 
Sbjct: 33  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 588 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    +++
Sbjct: 93  CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   T +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 705 VDVYSFGVLLLEIIS 719
            DV+S+GV + E+++
Sbjct: 207 SDVWSYGVTVWELMT 221

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V        R     VAVKKL R FQ     +    E+ ++    H+N++ L
Sbjct: 36  VGSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCS 640
           L       +     E     TL      N+     L       + +Q+ RGL Y+H   S
Sbjct: 93  LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 149
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           A IIH D+KP N+ +++    RI DFGLA           R A     GYVA  W+R   
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 198
Query: 701 IT-------AKVDVYSFGVLLLEIISCRKSF 724
           I          VD++S G ++ E++  +  F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 530 GSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 587
           G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RLLG 
Sbjct: 26  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 588 CDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    +++
Sbjct: 86  CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 139
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   T +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 705 VDVYSFGVLLLEIIS 719
            DV+S+GV + E+++
Sbjct: 200 SDVWSYGVTVWELMT 214

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + ++ RL
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 90  LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 143
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFG AKLL   + +      +    ++A E   +   
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 204 THQSDVWSYGVTVWELMT 221

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLV 582
           + VG G++G V   V    RT    VA+KKL R FQ     K    E+ ++    H+N++
Sbjct: 31  QPVGSGAYGAVCSAV--DGRTGAK-VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 583 RLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            LL         D+  +  LV  F+  GT    L  + K   +    + +Q+ +GL Y+H
Sbjct: 88  GLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-- 694
              +A IIH D+KP N+ +++    +I DFGLA+     Q+ +       T+ Y APE  
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVI 197
Query: 695 --WFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
             W R    T  VD++S G ++ E+I+ +  F
Sbjct: 198 LNWMR---YTQTVDIWSVGCIMAEMITGKTLF 226

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           K+ EE  D   E++G GS+G VYK +    + +   VA+K++    +   +E   E+ ++
Sbjct: 25  KQPEEVFDVL-EKLGEGSYGSVYKAI---HKETGQIVAIKQVP--VESDLQEIIKEISIM 78
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGL 632
            Q    ++V+  G   +  +  +V E+   G+++  +   N   + +    I     +GL
Sbjct: 79  QQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YLH     + IH DIK  NILL+   +A+++DFG+A  LT   +K  R  + GT  ++A
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXVIGTPFWMA 193
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           PE  +        D++S G+  +E+   +  +
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAVK +D+   +    +K F+ EV ++   +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T         A  G   Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 25/231 (10%)
Query: 502 GTIETNLPCFSYKELEEATDNFKEEV----GRGSFGIVYKGVILTTRTSTTAVAVKKL-- 555
           G+I+        KE  E  D  + E+    G+GSFG V+    ++   +    A+K L  
Sbjct: 4   GSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 63
Query: 556 ------DRVFQDGEKEFKNEVVVIGQTHHKNLVRL-LGFCDEGQNRLLVYEFLNNGTLAS 608
                 DRV    E++      ++ + +H  +V+L   F  EG+   L+ +FL  G L +
Sbjct: 64  ATLKVRDRVRTKMERD------ILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFT 116
Query: 609 FLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL 668
            L    K       ++ F +A   L L    S  II+ D+KP+NILLD+  + +++DFGL
Sbjct: 117 RLS---KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 173
Query: 669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +K    ++ KA   +  GT  Y+APE       T   D +SFGVL+ E+++
Sbjct: 174 SKESIDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V            T VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 51  IGEGAYGMVSSAY---DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIR 107
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+L++   + +I DFGLA++           T    T+ Y APE   NS  
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           VG G++G V        R     VAVKKL R FQ     +    E+ ++    H+N++ L
Sbjct: 28  VGSGAYGSVCSAYDARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCS 640
           L       +     E     TL      N+     L       + +Q+ RGL Y+H   S
Sbjct: 85  LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 141
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           A IIH D+KP N+ +++    RI DFGLA           R A     GYVA  W+R   
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 190
Query: 701 IT-------AKVDVYSFGVLLLEIISCRKSF 724
           I          VD++S G ++ E++  +  F
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD+++  EE+G+G+F +V +  +  T T   A  +    ++     ++ + E  +     
Sbjct: 30  TDDYQLFEELGKGAFSVVRR-CVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N+VRL     E     LV++ +  G L   +      S    ++   QI   + ++H+
Sbjct: 89  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 638 DCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
                I+H D+KP+N+LL         +++DFGLA  + +   +       GT GY++PE
Sbjct: 149 H---DIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPE 203
Query: 695 WFRNSTITAKVDVYSFGVLL 714
             R       VD+++ GV+L
Sbjct: 204 VLRKDPYGKPVDIWACGVIL 223

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 17  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 76
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV-YEFLNNGTLASFL--FGNLK 615
            ++       E  V+ +  H   V+L  FC +   +L     +  NG L  ++   G+  
Sbjct: 77  KENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD 135
Query: 616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
            +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+  
Sbjct: 136 ETCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 190
Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
             +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I 
Sbjct: 191 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 248

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 523 FKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHH 578
            ++ +G+G+F  V     +LT R     VAVK +D+   +    +K F+ EV ++   +H
Sbjct: 19  LQKTIGKGNFAKVKLARHVLTGR----EVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNH 73
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
            N+V+L    +  +   LV E+ + G +  +L  + +           QI   + Y H+ 
Sbjct: 74  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               I+H D+K +N+LLD   N +I+DFG +   T+           G+  Y APE F+ 
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPYAAPELFQG 187
Query: 699 STITA-KVDVYSFGVLLLEIISCRKSFD 725
                 +VDV+S GV+L  ++S    FD
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ + +VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV          +   VAVKKL R FQ+    K    E+V++   +HKN++ L
Sbjct: 32  IGSGAQGIVCAAFDTVLGIN---VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL 88
Query: 585 LGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           L         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +LH  
Sbjct: 89  LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH-- 143
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            SA IIH D+KP NI++      +I DFGLA+    N    + T    T+ Y APE    
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILG 199
Query: 699 STITAKVDVYSFGVLLLEIIS 719
               A VD++S G ++ E++ 
Sbjct: 200 MGYAANVDIWSVGCIMGELVK 220

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 577
           NF   +G+GSFG     V+L+ R  T    AV + K D V QD + E    E  V+    
Sbjct: 344 NFLMVLGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 578 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 634
               +  L  C +  +RL  V E++N G L   +   G  K    +    A +IA GL +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV--FYAAEIAIGLFF 457
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAP 693
           L    S  II+ D+K  N++LD   + +I+DFG+ K    N    + T    GT  Y+AP
Sbjct: 458 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCGTPDYIAP 511
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           E          VD ++FGVLL E+++ +  F+ E  +E
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+FG VYKG+ I         VA+ +L +       KE  +E  V+    + ++ RL
Sbjct: 57  LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLF---GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           LG C     +L+  + +  G L  ++     N+   + L  N   QIA+G+ YL +    
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 170
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E   +   
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 702 TAKVDVYSFGVLLLEIIS 719
           T + DV+S+GV + E+++
Sbjct: 231 THQSDVWSYGVTVWELMT 248

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 522 NFKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQT-H 577
            F + +G G+FG V       ++    +  VAVK L       E+E   +E+ ++ Q   
Sbjct: 48  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL-------------FGNLK-----PSWN 619
           H+N+V LLG C       L++E+   G L ++L             + N K        N
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 620 LRT-----NIAFQIARGLLYLH-EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT 673
           + T       A+Q+A+G+ +L  + C    +H D+  +N+L+      +I DFGLA+ + 
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
            + +  +R   R    ++APE       T K DV+S+G+LL EI S
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTT---AVAVKKLDRVFQDGEKEFKN-EVVVIGQTH 577
           NF   +G+GSFG     V+L+ R  T    AV + K D V QD + E    E  V+    
Sbjct: 23  NFLMVLGKGSFG----KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 578 HKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLY 634
               +  L  C +  +RL  V E++N G L   +   G  K    +    A +IA GL +
Sbjct: 79  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV--FYAAEIAIGLFF 136
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAP 693
           L    S  II+ D+K  N++LD   + +I+DFG+ K    N    + T    GT  Y+AP
Sbjct: 137 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCGTPDYIAP 190
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           E          VD ++FGVLL E+++ +  F+ E  +E
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 10  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 69
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 130 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A   A  GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 242
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 243 KIIKLEYDFPEKFFPKARDLVE 264

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT R     VA+K +D+   +    +K F+ EV ++   +H N+V
Sbjct: 20  IGKGNFAKVKLARHILTGR----EVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIV 74
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   L+ E+ + G +  +L  + +       +   QI   + Y H+    +
Sbjct: 75  KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KR 131
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T+           G+  Y APE F+     
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGKKYD 188
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 16/277 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 15  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 74
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 75  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 134
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 135 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 247
Query: 737 -----DWAFDCYRNEKLDDLVEG--DMEALNDIKCVE 766
                ++ F      K  DLVE    ++A   + C E
Sbjct: 248 KIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEE 284

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 16/277 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A   +  GT  YV+PE     + +   D+++ G ++ ++++    F    G EY I  
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 244
Query: 737 -----DWAFDCYRNEKLDDLVEG--DMEALNDIKCVE 766
                ++ F      K  DLVE    ++A   + C E
Sbjct: 245 KIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTT----AVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           +++G G++G V     L  R   T    A+ + +   V      +   EV V+    H N
Sbjct: 43  KKLGSGAYGEV-----LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +++L  F ++ +N  LV E    G L   +   +K +      I  Q+  G+ YLH+   
Sbjct: 98  IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK--- 154
Query: 641 AQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             I+H D+KP+N+LL+        +I DFGL+ +   NQ K       GT  Y+APE  R
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL--GTAYYIAPEVLR 211
Query: 698 NSTITAKVDVYSFGVLLLEIIS 719
                 K DV+S GV+L  +++
Sbjct: 212 KK-YDEKCDVWSIGVILFILLA 232

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRLL 585
           +G GSFG+V++  ++     +  VA+KK   V QD  K FKN E+ ++    H N+V L 
Sbjct: 48  IGNGSFGVVFQAKLV----ESDEVAIKK---VLQD--KRFKNRELQIMRIVKHPNVVDLK 98
Query: 586 GFCDEGQNRL------LVYEFLNNGTL-ASFLFGNLKPSWN--LRTNIAFQIARGLLYLH 636
            F     ++       LV E++      AS  +  LK +    L     +Q+ R L Y+H
Sbjct: 99  AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD      ++ DFG AK+L   +          ++ Y APE 
Sbjct: 159 ---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC---SRYYRAPEL 212
Query: 696 -FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
            F  +  T  +D++S G ++ E++  +  F  E G
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNL 581
           + +G G+FG V  G     + +   VAVK L+R      D   + K E+  +    H ++
Sbjct: 17  DTLGVGTFGKVKIG---EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           ++L        +  +V E+++ G L  ++  + +        +  QI   + Y H     
Sbjct: 74  IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--- 130
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            ++H D+KP+N+LLD + NA+I+DFGL+ +++    + +RT+  G+  Y APE       
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSC-GSPNYAAPEVISGRLY 187
Query: 702 TA-KVDVYSFGVLLLEIISCRKSFDIE 727
              +VD++S GV+L  ++     FD E
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDE 214

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 51  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   +L    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVR 583
            VG G++G V   +    + S   VA+KKL R FQ     K    E++++    H+N++ 
Sbjct: 49  HVGSGAYGSVCSAI---DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGLLYLHE 637
           LL       +    Y+F     +  F+  +L+    +  +      + +Q+ +GL Y+H 
Sbjct: 106 LLDVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH- 161
Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             SA ++H D+KP N+ +++    +I DFGLA           R A     GYV   W+R
Sbjct: 162 --SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYR 208
Query: 698 NSTIT-------AKVDVYSFGVLLLEIISCRKSF 724
              +          VD++S G ++ E+++ +  F
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 27/205 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--------DRVFQDGEKEFKNEVVVIGQTHH 578
           +G+GSFG V+    +T   S    A+K L        DRV    E++      ++   +H
Sbjct: 36  LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD------ILADVNH 89
Query: 579 KNLVRL-LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLY 634
             +V+L   F  EG+   L+ +FL  G L + L    K       ++ F   ++A GL +
Sbjct: 90  PFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALGLDH 145
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  II+ D+KP+NILLD+  + +++DFGL+K    ++ KA   +  GT  Y+APE
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPE 200
Query: 695 WFRNSTITAKVDVYSFGVLLLEIIS 719
                  +   D +S+GVL+ E+++
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLT 225

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAVK +D+   +    +K F+ EV +    +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T         A  G   Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAVK +D+   +    +K F+ EV ++   +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T            G+  Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 62  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 113
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 227
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELL 251

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAVK +D+   +    +K F+ EV ++   +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T            G+  Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 66  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 117
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 178 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 231
Query: 696 FRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
              +T  T+ +DV+S G +L E++  +  F  + G
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 64  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 115
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 176 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 229
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELL 253

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 62  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 113
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 227
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELL 251

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S GV++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMI 219

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 107 IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 158
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 219 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 272
Query: 696 FRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
              +T  T+ +DV+S G +L E++  +  F  + G
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 56  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 107
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 168 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 221
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELL 245

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLVR 583
           ++G GS+G+V+K      R +   VA+KK      D   +K    E+ ++ Q  H NLV 
Sbjct: 10  KIGEGSYGVVFK---CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           LL      +   LV+E+ ++  L            +L  +I +Q  + + + H+      
Sbjct: 67  LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNC 123
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST-IT 702
           IH D+KP+NIL+  +   ++ DFG A+LLT   S      +  T+ Y +PE     T   
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEV-ATRWYRSPELLVGDTQYG 181
Query: 703 AKVDVYSFGVLLLEIIS 719
             VDV++ G +  E++S
Sbjct: 182 PPVDVWAIGCVFAELLS 198

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVVAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S GV++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMI 219

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 31  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 40  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 91
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 205
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELL 229

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 47  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 98
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 99  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 159 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 212
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELL 236

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 13  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 72
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 73  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 133 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A   +  GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 245
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 246 KIIKLEYDFPEKFFPKARDLVE 267

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 36  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 87
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 88  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 148 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 201
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELL 225

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 40  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 91
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 205
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELL 229

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 32  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 83
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 84  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 144 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 197
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELL 221

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 31  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 520 TDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD +  KE++G GS+ +  + +    + +    AVK +D+  +D  +E +   +++    
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCI---HKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N++ L    D+G+   +V E    G L   +      S    + + F I + + YLH 
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 638 DCSAQIIHCDIKPQNIL-LDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
             +  ++H D+KP NIL +D+  N    RI DFG AK   L     +      T  +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTANFVAP 189
Query: 694 EWFRNSTITAKVDVYSFGVLL 714
           E        A  D++S GVLL
Sbjct: 190 EVLERQGYDAACDIWSLGVLL 210

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 525 EEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E +G+G+F +V + +   T  + +   V V K         ++ K E  +     H ++V
Sbjct: 30  EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
            LL          +V+EF++   L         A F++     S  +R     QI   L 
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           Y H++    IIH D+KP+N+LL    N+   ++ DFG+A  + L +S  +     GT  +
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +APE  +       VDV+  GV+L  ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 41  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 92
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 93  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 153 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 206
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELL 230

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 39  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 96  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 152
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIF 236

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 31  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 33  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 84
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 85  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 145 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 198
Query: 696 FRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
              +T  T+ +DV+S G +L E++  +  F  + G
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 31  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV          +   VAVKKL R FQ+    K    E+V++   +HKN++ L
Sbjct: 30  IGSGAQGIVCAAFDTVLGIN---VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL 86
Query: 585 LGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           L         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +LH  
Sbjct: 87  LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH-- 141
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            SA IIH D+KP NI++      +I DFGLA+  + N    + T    T+ Y APE    
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTPYVVTRYYRAPEVILG 197
Query: 699 STITAKVDVYSFGVLLLEII 718
                 VD++S G ++ E++
Sbjct: 198 MGYKENVDIWSVGCIMGELV 217

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 33  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 31  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 29  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 80
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 81  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 141 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 194
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELL 218

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G+FG V K         +   A+KK+ R  ++      +EV+++   +H+ +VR   
Sbjct: 14  LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 587 FCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGL 632
              E +N               +  E+  NGTL   +   NL    +    +  QI   L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-------LLTLN------QSKA 679
            Y+H   S  IIH D+KP NI +D+  N +I DFGLAK       +L L+       S  
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 680 IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEII 718
           + +AI GT  YVA E    +     K+D+YS G++  E+I
Sbjct: 187 LTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 25  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 79  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSYLLYQMLXGIKHL 135
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 189
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILF 218

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAV+ +D+   +    +K F+ EV ++   +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T            G+  Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 13  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 72
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 73  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 133 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 245
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 246 KIIKLEYDFPEKFFPKARDLVE 267

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 51  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV--VVIGQTH---- 577
           K+ +GRG   +V + V    R +    AVK ++   +    E   EV      +TH    
Sbjct: 99  KDVIGRGVSSVVRRCV---HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 578 ---HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
              H +++ L+   +      LV++ +  G L  +L   +  S     +I   +   + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   +  I+H D+KP+NILLDD    R+SDFG +    L   + +R  + GT GY+APE
Sbjct: 216 LH---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRE-LCGTPGYLAPE 269
Query: 695 WFRNSTITA------KVDVYSFGVLLLEIISCRKSF 724
             + S          +VD+++ GV+L  +++    F
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V QD  K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 244
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 245 KIIKLEYDFPEKFFPKARDLVE 266

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 244
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 245 KIIKLEYDFPEKFFPKARDLVE 266

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q  +   +  L
Sbjct: 60  IGRGSYAKVLL-VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 586 GFCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C + ++RL  V E++N G L   +    K P  + R   A +I+  L YLHE     I
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 174
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+K  N+LLD   + +++D+G+ K   L       T   GT  Y+APE  R      
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFC-GTPNYIAPEILRGEDYGF 232
Query: 704 KVDVYSFGVLLLEIISCRKSFDI 726
            VD ++ GVL+ E+++ R  FDI
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDI 255

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           KE +G GS+    + V    + +    AVK +D+  +D  +E +   +++    H N++ 
Sbjct: 32  KETIGVGSYSECKRCV---HKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L    D+G++  LV E +  G L   +      S    + +   I + + YLH   S  +
Sbjct: 86  LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGV 142
Query: 644 IHCDIKPQNIL-LDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           +H D+KP NIL +D+  N    RI DFG AK L       +      T  +VAPE  +  
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQ 200
Query: 700 TITAKVDVYSFGVLLLEIISCRKSF 724
                 D++S G+LL  +++    F
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           EE+G+G+F +V + V +       A  +       +D +K  + E  +     H N+VRL
Sbjct: 28  EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                E  +  L+++ +  G L   +      S    ++   QI   +L+ H+     ++
Sbjct: 87  HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 143
Query: 645 HCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H D+KP+N+LL         +++DFGLA  + +   +       GT GY++PE  R    
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 702 TAKVDVYSFGVLL 714
              VD+++ GV+L
Sbjct: 202 GKPVDLWACGVIL 214

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAV+ +D+   +    +K F+ EV ++   +H N+V
Sbjct: 22  IGKGNFAKVKLARHILTGK----EVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 76
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           +L    +  +   LV E+ + G +  +L  + +           QI   + Y H+     
Sbjct: 77  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF--- 133
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           I+H D+K +N+LLD   N +I+DFG +   T            G+  Y APE F+     
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYD 190
Query: 703 A-KVDVYSFGVLLLEIISCRKSFD 725
             +VDV+S GV+L  ++S    FD
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 29  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 142
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIF 226

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++    H+N++ + 
Sbjct: 33  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 29  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 142
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIF 226

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 36  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 149
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIF 233

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 10  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 69
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 130 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I 
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 37  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 94  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 150
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIF 234

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 28  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 85  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 141
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIF 225

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 10  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 69
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 130 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 242
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 243 KIIKLEYDFPEKFFPKARDLVE 264

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I  
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQ 244
Query: 737 -----DWAFDCYRNEKLDDLVE 753
                ++ F      K  DLVE
Sbjct: 245 KIIKLEYDFPEKFFPKARDLVE 266

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 70  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 180
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 234
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILF 263

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 32  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 92  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 146
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A   +  GT  YV+PE     
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           +     D+++ G ++ ++++    F    G EY I 
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
             KE +G G FG V + +    + +   VA+K+  +      +E +  E+ ++ + +H N
Sbjct: 18  EMKERLGTGGFGYVLRWI---HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 581 LVRLLGFCDEGQN------RLLVYEFLNNGTLASFL--FGN---LKPSWNLRTNIAFQIA 629
           +V      D  Q        LL  E+   G L  +L  F N   LK    +RT ++  I+
Sbjct: 75  VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DIS 132
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             L YLHE+   +IIH D+KP+NI+L         +I D G AK   L+Q +   T   G
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELC-TEFVG 186
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           T  Y+APE       T  VD +SFG L  E I+  + F
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++    H+N++ + 
Sbjct: 33  IGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q  +   +  L
Sbjct: 28  IGRGSYAKVLL-VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 586 GFCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C + ++RL  V E++N G L   +    K P  + R   A +I+  L YLHE     I
Sbjct: 87  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 142
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWFRN 698
           I+ D+K  N+LLD   + +++D+G+ K       + +R     +   GT  Y+APE  R 
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDI 726
                 VD ++ GVL+ E+++ R  FDI
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFDI 223

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 29/197 (14%)
Query: 599 EFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD 656
           EF + GTL  ++        +  L   +  QI +G+ Y+H   S ++IH D+KP NI L 
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLE 716
           D    +I DFGL   L   ++   RT  +GT  Y++PE   +     +VD+Y+ G++L E
Sbjct: 171 DTKQVKIGDFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 717 IISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCI 776
           ++                + D AF+  +     DL +G +  + D K  EK ++  +  +
Sbjct: 228 LLH---------------VCDTAFETSKF--FTDLRDGIISDIFDKK--EKTLLQKL--L 266
Query: 777 QEDPSLRPTMKKVLQML 793
            + P  RP   ++L+ L
Sbjct: 267 SKKPEDRPNTSEILRTL 283

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
             KE +G G FG V + +    + +   VA+K+  +      +E +  E+ ++ + +H N
Sbjct: 17  EMKERLGTGGFGYVLRWI---HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 581 LVRLLGFCDEGQN------RLLVYEFLNNGTLASFL--FGN---LKPSWNLRTNIAFQIA 629
           +V      D  Q        LL  E+   G L  +L  F N   LK    +RT ++  I+
Sbjct: 74  VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DIS 131
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             L YLHE+   +IIH D+KP+NI+L         +I D G AK   L+Q +   T   G
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELC-TEFVG 185
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           T  Y+APE       T  VD +SFG L  E I+  + F
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q  +   +  L
Sbjct: 17  IGRGSYAKVLL-VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 586 GFCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C + ++RL  V E++N G L   +    K P  + R   A +I+  L YLHE     I
Sbjct: 76  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 131
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWFRN 698
           I+ D+K  N+LLD   + +++D+G+ K       + +R     +   GT  Y+APE  R 
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDI 726
                 VD ++ GVL+ E+++ R  FDI
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFDI 212

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 16/254 (6%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 13  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 73  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 127
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNEKLDDLVEG 754
           +     D+++ G ++ ++++    F    G EY I       ++ F      K  DLVE 
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEK 245
Query: 755 --DMEALNDIKCVE 766
              ++A   + C E
Sbjct: 246 LLVLDATKRLGCEE 259

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF-KNEVVVIGQTHHKNLVRLL 585
           +GRGS+  V   V L       A+ V K + V  D + ++ + E  V  Q  +   +  L
Sbjct: 13  IGRGSYAKVLL-VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 586 GFCDEGQNRLL-VYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQI 643
             C + ++RL  V E++N G L   +    K P  + R   A +I+  L YLHE     I
Sbjct: 72  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 127
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-----TAIRGTKGYVAPEWFRN 698
           I+ D+K  N+LLD   + +++D+G+ K       + +R     +   GT  Y+APE  R 
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDI 726
                 VD ++ GVL+ E+++ R  FDI
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGRSPFDI 208

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNL 581
           + +G G+FG V  G     + +   VAVK L+R      D   + K E+  +    H ++
Sbjct: 17  DTLGVGTFGKVKIG---EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           ++L        +  +V E+++ G L  ++  + +        +  QI   + Y H     
Sbjct: 74  IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--- 130
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            ++H D+KP+N+LLD + NA+I+DFGL+ +++    + +R +  G+  Y APE       
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSC-GSPNYAAPEVISGRLY 187
Query: 702 TA-KVDVYSFGVLLLEIISCRKSFDIE 727
              +VD++S GV+L  ++     FD E
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDE 214

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + ++   A K +D   ++  +++  E+ ++    H N+V+LL
Sbjct: 44  ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-QIARGLLYLHEDCSAQII 644
                  N  ++ EF   G + + +    +P    +  +   Q    L YLH++   +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF-----RNS 699
           H D+K  NIL     + +++DFG++   T    +  R +  GT  ++APE       ++ 
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDR 215
Query: 700 TITAKVDVYSFGVLLLEI 717
               K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 16/254 (6%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 12  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 72  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 126
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNEKLDDLVEG 754
           +     D+++ G ++ ++++    F    G EY I       ++ F      K  DLVE 
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEK 244
Query: 755 --DMEALNDIKCVE 766
              ++A   + C E
Sbjct: 245 LLVLDATKRLGCEE 258

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           KE +G GS+    + V    + +    AVK +D+  +D  +E +   +++    H N++ 
Sbjct: 32  KETIGVGSYSECKRCV---HKATNMEYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L    D+G++  LV E +  G L   +      S    + +   I + + YLH   S  +
Sbjct: 86  LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGV 142
Query: 644 IHCDIKPQNIL-LDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           +H D+KP NIL +D+  N    RI DFG AK L       +      T  +VAPE  +  
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQ 200
Query: 700 TITAKVDVYSFGVLLLEIISCRKSF 724
                 D++S G+LL  +++    F
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 10  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 70  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 124
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           +     D+++ G ++ ++++    F    G EY I 
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 218

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 70  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 180
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 234
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILF 263

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 32  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 92  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 146
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           +     D+++ G ++ ++++    F    G EY I 
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 71  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 125
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           +     D+++ G ++ ++++    F    G EY I 
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 219

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 52/287 (18%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E +G G FG V+K      R       +K   RV  + EK  + EV  + +  H N+V  
Sbjct: 17  ELIGSGGFGQVFKA---KHRIDGKTYVIK---RVKYNNEKA-EREVKALAKLDHVNIVHY 69
Query: 585 LGFCD----------EGQNR------LLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAF 626
            G  D          +  +R       +  EF + GTL  ++        +  L   +  
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
           QI +G+ Y+H   S ++I+ D+KP NI L D    +I DFGL   L  N  K  R+  +G
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDGKRXRS--KG 183
Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
           T  Y++PE   +     +VD+Y+ G++L E++                + D AF+  +  
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLH---------------VCDTAFETSKF- 227
Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
              DL +G +  + D K  EK ++  +  + + P  RP   ++L+ L
Sbjct: 228 -FTDLRDGIISDIFDKK--EKTLLQKL--LSKKPEDRPNTSEILRTL 269

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + ++   A K +D   ++  +++  E+ ++    H N+V+LL
Sbjct: 44  ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-QIARGLLYLHEDCSAQII 644
                  N  ++ EF   G + + +    +P    +  +   Q    L YLH++   +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF-----RNS 699
           H D+K  NIL     + +++DFG++   T    +  R +  GT  ++APE       ++ 
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAPEVVMCETSKDR 215
Query: 700 TITAKVDVYSFGVLLLEI 717
               K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLV 582
           E +G G++G+V        R +   VA+KK+   F      K    E+ ++    H N++
Sbjct: 61  ETIGNGAYGVVSSA---RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 117
Query: 583 RLLGFCD------EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            +           E ++  +V + + +  L   +  +   +        +Q+ RGL Y+H
Sbjct: 118 AIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN--QSKAIRTAIRGTKGYVAPE 694
              SAQ+IH D+KP N+L+++    +I DFG+A+ L  +  + +   T    T+ Y APE
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 695 WFRN-STITAKVDVYSFGVLLLEIISCRKSF 724
              +    T  +D++S G +  E+++ R+ F
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA++K+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F + +G GSF  V     L T        ++K   + ++       E  V+ +  H   
Sbjct: 17  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           V+L     + +       +  NG L  ++   G+   +   R   A +I   L YLH   
Sbjct: 77  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-EIVSALEYLH--- 131
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              IIH D+KP+NILL++  + +I+DFG AK+L+    +A      GT  YV+PE     
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           +     D+++ G ++ ++++    F    G EY I 
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 225

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 10/193 (5%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +++G G++G V       T        +KK             +EV V+ Q  H N+++L
Sbjct: 27  KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
             F ++ +N  LV E    G L   +    K S      I  Q+  G  YLH+     I+
Sbjct: 87  YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 143
Query: 645 HCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H D+KP+N+LL+        +I DFGL+    +      R    GT  Y+APE  R    
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAPEVLRKK-Y 199
Query: 702 TAKVDVYSFGVLL 714
             K DV+S GV+L
Sbjct: 200 DEKCDVWSCGVIL 212

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 527 VGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLV 582
           +G+G+F  V     ILT +     VAVK +D+   +    +K F+ EV ++   +H N+V
Sbjct: 15  IGKGNFAKVKLARHILTGK----EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIV 69
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSW--NLRTNIAF-QIARGLLYLHEDC 639
           +L    +  +   LV E+ + G +  +L  +    W         F QI   + Y H+  
Sbjct: 70  KLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I+H D+K +N+LLD   N +I+DFG +   T            G+  Y APE F+  
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGK 180
Query: 700 TITA-KVDVYSFGVLLLEIISCRKSFD 725
                +VDV+S GV+L  ++S    FD
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFD 207

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 33  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 87  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 143
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 197
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILF 226

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 26  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 80  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 190
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILF 219

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 33  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 87  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 143
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 197
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILF 226

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 31  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 85  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 141
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 142 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 195
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILF 224

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 30/288 (10%)
Query: 526 EVGRGSFGIVYKGVILTTRTST-TAVAVKKLDR----VFQDGEKEFKNEVVVIGQTHHKN 580
           ++G G FG V       T   T   VAVK L        + G   ++ E+ ++   +H++
Sbjct: 16  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEH 72
Query: 581 LVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +V+  G C D+G+  + LV E++  G+L  +L  +      L    A QI  G+ YLH  
Sbjct: 73  IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH-- 129
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWFR 697
            +   IH  +  +N+LLD+    +I DFGLAK +   ++   +R        + APE  +
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 698 NSTITAKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD 750
                   DV+SFGV L E++       S    F   +G     +T          +L +
Sbjct: 189 ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL--------RLTE 240
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
           L+E         +C  ++  +   C + + S RPT + ++ +L+   E
Sbjct: 241 LLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 25  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 79  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 135
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 189
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILF 218

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           EE+G+G+F +V + V +       A+ +       +D +K  + E  +     H N+VRL
Sbjct: 17  EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLKHPNIVRL 75
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                E  +  L+++ +  G L   +      S    ++   QI   +L+ H+     ++
Sbjct: 76  HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 132
Query: 645 HCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           H ++KP+N+LL         +++DFGLA  + +   +       GT GY++PE  R    
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 702 TAKVDVYSFGVLL 714
              VD+++ GV+L
Sbjct: 191 GKPVDLWACGVIL 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 516 LEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 574 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  +
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
            Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  V+         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 26  IGSGAQGIVCAAYDAVL------DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  LV E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 80  ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 190
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF 724
                    VD++S G ++ E++  +  F
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILF 219

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 568 NEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQ 627
           +EV V+ Q  H N+++L  F ++ +N  LV E    G L   +    K S      I  Q
Sbjct: 53  DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAI 684
           +  G  YLH+     I+H D+KP+N+LL+        +I DFGL+    +      R   
Sbjct: 113 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-- 167
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
            GT  Y+APE  R      K DV+S GV+L
Sbjct: 168 -GTAYYIAPEVLRKK-YDEKCDVWSCGVIL 195

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 516 LEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 574 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  +
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
            Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 516 LEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 574 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  +
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
            Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 516 LEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 574 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  +
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
            Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 516 LEEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 574 GQTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  +
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
            Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 30/288 (10%)
Query: 526 EVGRGSFGIVYKGVILTTRTST-TAVAVKKLDR----VFQDGEKEFKNEVVVIGQTHHKN 580
           ++G G FG V       T   T   VAVK L        + G   ++ E+ ++   +H++
Sbjct: 15  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEH 71
Query: 581 LVRLLGFC-DEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +V+  G C D+G+  + LV E++  G+L  +L  +      L    A QI  G+ YLH  
Sbjct: 72  IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLH-- 128
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWFR 697
            +   IH  +  +N+LLD+    +I DFGLAK +   ++   +R        + APE  +
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 698 NSTITAKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD 750
                   DV+SFGV L E++       S    F   +G     +T          +L +
Sbjct: 188 ECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL--------RLTE 239
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
           L+E         +C  ++  +   C + + S RPT + ++ +L+   E
Sbjct: 240 LLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + ++   A K +D   ++  +++  E+ ++    H N+V+LL
Sbjct: 44  ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF-QIARGLLYLHEDCSAQII 644
                  N  ++ EF   G + + +    +P    +  +   Q    L YLH++   +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF-----RNS 699
           H D+K  NIL     + +++DFG++   T    +  R    GT  ++APE       ++ 
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPEVVMCETSKDR 215
Query: 700 TITAKVDVYSFGVLLLEI 717
               K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 521 DNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTH 577
           D+F+   E+G G+ G+V K   +  R S   +A K +    +     +   E+ V+ + +
Sbjct: 16  DDFERISELGAGNGGVVTK---VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 578 HKNLVRLLG-FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
              +V   G F  +G+  + + E ++ G+L   L    +    +   ++  + RGL YL 
Sbjct: 73  SPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
           E    QI+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ Y+APE  
Sbjct: 132 E--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMAPERL 185
Query: 697 RNSTITAKVDVYSFGVLLLEIISCR 721
           + +  + + D++S G+ L+E+   R
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGR 210

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLV 582
           E +G G++G+V        R +   VA+KK+   F      K    E+ ++    H N++
Sbjct: 60  ETIGNGAYGVVSSA---RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 116
Query: 583 RLLGFCD------EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            +           E ++  +V + + +  L   +  +   +        +Q+ RGL Y+H
Sbjct: 117 AIKDILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN--QSKAIRTAIRGTKGYVAPE 694
              SAQ+IH D+KP N+L+++    +I DFG+A+ L  +  + +   T    T+ Y APE
Sbjct: 176 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 695 WFRN-STITAKVDVYSFGVLLLEIISCRKSF 724
              +    T  +D++S G +  E+++ R+ F
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 9/239 (3%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF        L T        ++K   +
Sbjct: 10  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHII 69
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 70  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 130 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
            +A      GT  YV+PE     +     D+++ G ++ ++++    F    G EY I 
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 35  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +            T+ Y APE   NS  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G G++G+V          +   VA+KK+     Q   +    E+ ++ +  H+N++ + 
Sbjct: 36  IGEGAYGMVCSAY---DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF---QIARGLLYLHEDCSAQ 642
                     +   ++    + + L+  LK       +I +   QI RGL Y+H   SA 
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SAN 149
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNST- 700
           ++H D+KP N+LL+   + +I DFGLA++   +            T+ Y APE   NS  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 701 ITAKVDVYSFGVLLLEIISCRKSF 724
            T  +D++S G +L E++S R  F
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIF 233

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 523 FKEEVGRGSFGIVYKGVILTT----RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           F E +G+G+F  ++KGV        +   T V +K LD+  ++  + F     ++ +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYL 635
           K+LV   G C  G   +LV EF+  G+L ++L  N   +   W L   +A Q+A  + +L
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAAAMHFL 129
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAP 693
            E+    +IH ++  +NILL    + +  +    KL     S  +  +  ++    +V P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 694 EWFRN-STITAKVDVYSFGVLLLEIIS 719
           E   N   +    D +SFG  L EI S
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS 213

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 521 DNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++   Q  H
Sbjct: 68  DDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLH 121
Query: 579 K-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
           + N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  + +GL 
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ Y++P
Sbjct: 181 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSP 234
Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCR 721
           E  + +  + + D++S G+ L+E+   R
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G G++G+VYK         T A+   +L++  +        E+ ++ +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 585 LGFCDEGQNRLLVYEFLNN--GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
                  +  +LV+E L+     L     G L+       +   Q+  G+ Y H+    +
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TI 701
           ++H D+KPQN+L++     +I+DFGLA+   +   K     +  T  Y AP+    S   
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 702 TAKVDVYSFGVLLLEIIS 719
           +  +D++S G +  E+++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G G++G+VYK         T A+   +L++  +        E+ ++ +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 585 LGFCDEGQNRLLVYEFLNN--GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
                  +  +LV+E L+     L     G L+       +   Q+  G+ Y H+    +
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TI 701
           ++H D+KPQN+L++     +I+DFGLA+   +   K     +  T  Y AP+    S   
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 702 TAKVDVYSFGVLLLEIIS 719
           +  +D++S G +  E+++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
            +A      GT  YV+PE     +     D+++ G ++ ++++    F
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 499 PGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV 558
           PG G+++   P    ++       F + +G GSF  V     L T        ++K   +
Sbjct: 12  PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII 71
Query: 559 FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKP 616
            ++       E  V+ +  H   V+L     + +       +  NG L  ++   G+   
Sbjct: 72  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           +   R   A +I   L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+   
Sbjct: 132 TCT-RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
            +A      GT  YV+PE     +     D+++ G ++ ++++    F
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG------------------- 562
             K+E+G+GS+G+V         T      + K   + Q G                   
Sbjct: 16  TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQ 75
Query: 563 ----EKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRL-LVYEFLNNGTLASFLFGNLKP 616
                ++   E+ ++ +  H N+V+L+   D+  ++ L +V+E +N G +       LKP
Sbjct: 76  PRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKP 133
Query: 617 SWNLRTNIAFQ-IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
               +    FQ + +G+ YLH     +IIH DIKP N+L+ +  + +I+DFG++      
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFK 188
Query: 676 QSKAIRTAIRGTKGYVAPEWF---RNSTITAKVDVYSFGVLL 714
            S A+ +   GT  ++APE     R       +DV++ GV L
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G G++G+VYK         T A+   +L++  +        E+ ++ +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 585 LGFCDEGQNRLLVYEFLNN--GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
                  +  +LV+E L+     L     G L+       +   Q+  G+ Y H+    +
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TI 701
           ++H D+KPQN+L++     +I+DFGLA+   +   K     +  T  Y AP+    S   
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKY 178
Query: 702 TAKVDVYSFGVLLLEIIS 719
           +  +D++S G +  E+++
Sbjct: 179 STTIDIWSVGCIFAEMVN 196

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V Q   K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    + + ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +          ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
              +T  T+ +DV+S G +L E++  +  F  + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L+  +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
                    VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G+FG V K         +   A+KK+ R  ++      +EV+++   +H+ +VR   
Sbjct: 14  LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 587 FCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGL 632
              E +N               +  E+  N TL   +   NL    +    +  QI   L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-------LLTLN------QSKA 679
            Y+H   S  IIH D+KP NI +D+  N +I DFGLAK       +L L+       S  
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 680 IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEII 718
           + +AI GT  YVA E    +     K+D+YS G++  E+I
Sbjct: 187 LTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           L+      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 523 FKEEVGRGSFGIVYKGVILTT----RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           F E +G+G+F  ++KGV        +   T V +K LD+  ++  + F     ++ +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYL 635
           K+LV   G C  G   +LV EF+  G+L ++L  N   +   W L   +A Q+A  + +L
Sbjct: 72  KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAWAMHFL 129
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYVAP 693
            E+    +IH ++  +NILL    + +  +    KL     S  +  +  ++    +V P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 694 EWFRN-STITAKVDVYSFGVLLLEIIS 719
           E   N   +    D +SFG  L EI S
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS 213

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVV 572
           +E+  AT   +  +GRGSFG V++   +  + +    AVKK+   VF+        E++ 
Sbjct: 90  EEVHWATHQLR--LGRGSFGEVHR---MEDKQTGFQCAVKKVRLEVFR------AEELMA 138
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----QI 628
                   +V L G   EG    +  E L  G+L   +    K    L  + A     Q 
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQA 194
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT---LNQSKAIRTAI 684
             GL YLH   S +I+H D+K  N+LL  D  +A + DFG A  L    L +S      I
Sbjct: 195 LEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
            GT+ ++APE     +  AKVDV+S   ++L ++
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           ++      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 33  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 87  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 143
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 197
Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                    VD++S G ++ E+I 
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIK 221

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                    VD++S G ++ E+I 
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIK 220

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 517 EEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++   
Sbjct: 29  ELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIREL 82
Query: 575 QTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  + 
Sbjct: 83  QVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 141
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ 
Sbjct: 142 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRS 195
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
           Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+  T   S  +   +  T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRK 722
                    VD++S G ++ E++ C K
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV-CHK 222

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           ++      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                    VD++S G ++ E+I 
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIK 220

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 37  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 91  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 147
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 148 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 201
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRK 722
                    VD++S G ++ E++ C K
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMV-CHK 227

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           ++      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           ++      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD ++  EE+G+G+F +V + + + T     A  +       +D +K  + E  +     
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N+VRL     E     LV++ +  G L   +      S    ++   QI   + + H 
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 638 DCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           +    I+H D+KP+N+LL         +++DFGLA  +  +Q      A  GT GY++PE
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 695 WFRNSTITAKVDVYSFGVLL 714
             R       VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V Q   K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEII 718
              +T  T+ +DV+S G +L E++
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 139/322 (43%), Gaps = 66/322 (20%)
Query: 506 TNLPCFSYKELEEATDNF---KEEVGRGSFG-IVYKGVILTTRTSTTAVAVKKLDRVFQD 561
            N+P F     E++  N    ++ +G GS G +V++G           VAVK++   F D
Sbjct: 4   ANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSF-----QGRPVAVKRMLIDFCD 53
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF-LNNGTLASFLFGNLKPSWN 619
               E K   ++     H N++R   +C E  +R L     L N  L   +        N
Sbjct: 54  IALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDEN 108
Query: 620 LRTNIAF-------QIARGLLYLHEDCSAQIIHCDIKPQNILL--------DDYYNAR-- 662
           L+    +       QIA G+ +LH   S +IIH D+KPQNIL+        D    A   
Sbjct: 109 LKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165
Query: 663 ---ISDFGLAKLLTLNQSKAIRTAIR---GTKGYVAPEWFRNST-------ITAKVDVYS 709
              ISDFGL K L   QS + RT +    GT G+ APE    S        +T  +D++S
Sbjct: 166 RILISDFGLCKKLDSGQS-SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 710 FGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV 769
            G +   I+S  K      G++Y+  ++     +    LD     +M+ L+D   + +  
Sbjct: 225 MGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEAT 273
Query: 770 MVSIWCIQEDPSLRPTMKKVLQ 791
            +    I  DP  RPT  KVL+
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLR 295

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 26  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 80  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 190
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRK 722
                    VD++S G ++ E++ C K
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMV-CHK 216

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVRL- 584
           +G GSFG+VY+  +     S   VA+KK   V Q   K FKN E+ ++ +  H N+VRL 
Sbjct: 28  IGNGSFGVVYQAKLCD---SGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA--------FQIARGLLYLH 636
             F   G+ +  VY  L    +   ++   +     +  +         +Q+ R L Y+H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              S  I H DIKPQN+LLD D    ++ DFG AK L   +      +   ++ Y APE 
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 696 FRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
              +T  T+ +DV+S G +L E++  +  F  + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                    VD++S G ++ E+I 
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIK 220

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
           TD ++  EE+G+G+F +V + + + T     A  +       +D +K  + E  +     
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLK 61
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H N+VRL     E     LV++ +  G L   +      S    ++   QI   + + H 
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 638 DCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           +    I+H D+KP+N+LL         +++DFGLA  +  +Q      A  GT GY++PE
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 695 WFRNSTITAKVDVYSFGVLL 714
             R       VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 596 LVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI 653
           +V E+++  TL   +   G + P   +   +     + L + H++    IIH D+KP NI
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAI--EVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 654 LLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEWFRNSTITAKVDVYSFGV 712
           ++      ++ DFG+A+ +  + +   +TA + GT  Y++PE  R  ++ A+ DVYS G 
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 713 LLLEIISCRKSF 724
           +L E+++    F
Sbjct: 225 VLYEVLTGEPPF 236

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 32  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 86  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+  T   S  +   +  T+ Y APE 
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEV 196
Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRK 722
                    VD++S G ++ E++ C K
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMV-CHK 222

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 144/337 (42%), Gaps = 66/337 (19%)
Query: 491 KKKWIRNS----PGDGTIETNLPCFSYKELEEATDNF---KEEVGRGSFG-IVYKGVILT 542
           KKK  R S     G  +   N+P F     E++  N    ++ +G GS G +V++G    
Sbjct: 3   KKKRKRGSRGGKKGRKSRIANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSF-- 55
Query: 543 TRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF- 600
                  VAVK++   F D    E K   ++     H N++R   +C E  +R L     
Sbjct: 56  ---QGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALE 107
Query: 601 LNNGTLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHEDCSAQIIHCDIKPQNI 653
           L N  L   +        NL+    +       QIA G+ +LH   S +IIH D+KPQNI
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
Query: 654 LL--------DDYYNAR-----ISDFGLAKLLTLNQSKAIRTAIR---GTKGYVAPEWFR 697
           L+        D    A      ISDFGL K L   Q    R  +    GT G+ APE   
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX-XFRXNLNNPSGTSGWRAPELLE 223
Query: 698 NST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            ST   +T  +D++S G +   I+S  K      G++Y+  ++     +    LD     
Sbjct: 224 ESTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD----- 272
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +M+ L+D   + +   +    I  DP  RPT  KVL+
Sbjct: 273 EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 144/337 (42%), Gaps = 66/337 (19%)
Query: 491 KKKWIRNS----PGDGTIETNLPCFSYKELEEATDNF---KEEVGRGSFG-IVYKGVILT 542
           KKK  R S     G  +   N+P F     E++  N    ++ +G GS G +V++G    
Sbjct: 3   KKKRKRGSRGGKKGRKSRIANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSF-- 55
Query: 543 TRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF- 600
                  VAVK++   F D    E K   ++     H N++R   +C E  +R L     
Sbjct: 56  ---QGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALE 107
Query: 601 LNNGTLASFLFGNLKPSWNLRTNIAF-------QIARGLLYLHEDCSAQIIHCDIKPQNI 653
           L N  L   +        NL+    +       QIA G+ +LH   S +IIH D+KPQNI
Sbjct: 108 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
Query: 654 LL--------DDYYNAR-----ISDFGLAKLLTLNQSKAIRTAIR---GTKGYVAPEWFR 697
           L+        D    A      ISDFGL K L   Q    R  +    GT G+ APE   
Sbjct: 165 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX-XFRXNLNNPSGTSGWRAPELLE 223
Query: 698 NST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            ST   +T  +D++S G +   I+S  K      G++Y+  ++     +    LD     
Sbjct: 224 ESTKRRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD----- 272
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +M+ L+D   + +   +    I  DP  RPT  KVL+
Sbjct: 273 EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 517 EEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++   
Sbjct: 21  ELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIREL 74
Query: 575 QTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  + 
Sbjct: 75  QVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 133
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL YL E    +I+H D+KP NIL++     ++ DFG++  L      ++  +  GT+ 
Sbjct: 134 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRS 187
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
           Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + +    A K ++   ++  +++  E+ ++    H  +V+LL
Sbjct: 18  ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           G         ++ EF   G + + +     G  +P   +   +  Q+   L +LH   S 
Sbjct: 75  GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 128
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAK--LLTLNQSKAIRTAIRGTKGYVAP-----E 694
           +IIH D+K  N+L+    + R++DFG++   L TL +    R +  GT  ++AP     E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK----RDSFIGTPYWMAPEVVMCE 184
Query: 695 WFRNSTITAKVDVYSFGVLLLEI 717
             +++    K D++S G+ L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 517 EEATDNFKE--EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           E   D+F++  E+G G+ G+V+K     +   +  V  +KL  +  + +   +N+++   
Sbjct: 5   ELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIREL 58
Query: 575 QTHHK-NLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           Q  H+ N   ++GF      +G+  + + E ++ G+L   L    +    +   ++  + 
Sbjct: 59  QVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 117
Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +GL YL E    +I+H D+KP NIL++     ++ DFG++  L       +     GT+ 
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DEMANEFVGTRS 171
Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
           Y++PE  + +  + + D++S G+ L+E+   R
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           E+G G+FG VYK      + +    A K ++   ++  +++  E+ ++    H  +V+LL
Sbjct: 26  ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           G         ++ EF   G + + +     G  +P   +   +  Q+   L +LH   S 
Sbjct: 83  GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAK--LLTLNQSKAIRTAIRGTKGYVAP-----E 694
           +IIH D+K  N+L+    + R++DFG++   L TL +    R +  GT  ++AP     E
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK----RDSFIGTPYWMAPEVVMCE 192
Query: 695 WFRNSTITAKVDVYSFGVLLLEI 717
             +++    K D++S G+ L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNE 569
           + Y+E E      +  VGRGSFG V++   +  + +    AVKK+   VF+        E
Sbjct: 51  YEYRE-EVHWMTHQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 100
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--- 626
           +V         +V L G   EG    +  E L  G+L   +    K    L  + A    
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYL 156
Query: 627 -QIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT---LNQSKAIR 681
            Q   GL YLH   + +I+H D+K  N+LL  D   A + DFG A  L    L +S    
Sbjct: 157 GQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
             I GT+ ++APE        AKVD++S   ++L ++
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 527 VGRGSFGIV---YKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNL 581
           +G G+ GIV   Y  ++         VA+KKL R FQ+    K    E+V++   +HKN+
Sbjct: 34  IGSGAQGIVCAAYDAIL------ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 582 VRLLGF------CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + LL         +E Q+  +V E ++   L   +   ++      + + +Q+  G+ +L
Sbjct: 88  IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 144
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   SA IIH D+KP NI++      +I DFGLA+      +  +      T+ Y APE 
Sbjct: 145 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTRYYRAPEV 198
Query: 696 FRNSTITAKVDVYSFGVLLLEIIS 719
                    VD++S G ++ E+I 
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIK 222

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNE 569
           + Y+E E      +  VGRGSFG V++   +  + +    AVKK+   VF+        E
Sbjct: 67  YEYRE-EVHWMTHQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 116
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--- 626
           +V         +V L G   EG    +  E L  G+L   +    K    L  + A    
Sbjct: 117 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYL 172
Query: 627 -QIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT---LNQSKAIR 681
            Q   GL YLH   + +I+H D+K  N+LL  D   A + DFG A  L    L +S    
Sbjct: 173 GQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
             I GT+ ++APE        AKVD++S   ++L ++
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 266

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 526 EVGRGSFGIVYK------GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           E+GRG++G+V K      G I+  +     V  ++  R+  D +   +        T + 
Sbjct: 58  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 580 NLVR------LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            L R       +   D   ++          T+   + G           IA  I + L 
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG----------KIAVSIVKALE 167
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH   S  +IH D+KP N+L++     ++ DFG++  L  + +K I     G K Y+AP
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCKPYMAP 222
Query: 694 EW----FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           E           + K D++S G+ ++E+   R  +D            W       ++L 
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPF---QQLK 268
Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +VE     L   K   + V  +  C++++   RPT  +++Q
Sbjct: 269 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVV 572
           +E+  AT   +  +GRGSFG V++   +  + +    AVKK+   VF+        E++ 
Sbjct: 71  EEVHWATHQLR--LGRGSFGEVHR---MEDKQTGFQCAVKKVRLEVFR------AEELMA 119
Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----QI 628
                   +V L G   EG    +  E L  G+L   +    K    L  + A     Q 
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQA 175
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT---LNQSKAIRTAI 684
             GL YLH   S +I+H D+K  N+LL  D  +A + DFG A  L    L +       I
Sbjct: 176 LEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
            GT+ ++APE     +  AKVDV+S   ++L ++
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 313
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 314 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 364

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 304
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 305 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 311
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 312 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 362

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +   
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   T + DV+SFGVLL EI S   S    +++ EE+         C
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 306
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            R      L EG      D    E +    + C   +PS RPT  ++++ L  +++ +
Sbjct: 307 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +FQ+ARG+ +L    S + IH D+  +NILL +    +I DFGLA+ +  N     +   
Sbjct: 205 SFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 742
           R    ++APE   +   + K DV+S+GVLL EI S   S    ++M E++         C
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF---------C 312
Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
            R      L EG M          ++  + + C   DP  RP   ++++ L
Sbjct: 313 SR------LREG-MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNE 569
           + Y+E E      +  +GRGSFG V++   +  + +    AVKK+   VF+        E
Sbjct: 65  YEYRE-EVHWMTHQPRLGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 114
Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--- 626
           +V         +V L G   EG    +  E L  G+L   +    K    L  + A    
Sbjct: 115 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYL 170
Query: 627 -QIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT---LNQSKAIR 681
            Q   GL YLH   + +I+H D+K  N+LL  D   A + DFG A  L    L +S    
Sbjct: 171 GQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEII 718
             I GT+ ++APE        AKVD++S   ++L ++
Sbjct: 228 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 264

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           +G GSF I  K V    + S  A AVK +  R+  + +KE     +  G   H N+V+L 
Sbjct: 19  LGEGSFSICRKCV---HKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLH 72
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL----YLHEDCSA 641
               +  +  LV E LN G L    F  +K   +     A  I R L+    ++H+    
Sbjct: 73  EVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---V 125
Query: 642 QIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            ++H D+KP+N+L    +D    +I DFG A+L   + ++ ++T    T  Y APE    
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPC-FTLHYAAPELLNQ 183
Query: 699 STITAKVDVYSFGVLLLEIISCRKSF 724
           +      D++S GV+L  ++S +  F
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPF 209

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E++GRG FGIV++ V  +++ +  A  V VK  D+V        K E+ ++    H+N++
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNIL 64
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS---WNLRTNIAF--QIARGLLYLHE 637
            L    +  +  ++++EF++       +F  +  S    N R  +++  Q+   L +LH 
Sbjct: 65  HLHESFESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCEALQFLH- 119
Query: 638 DCSAQIIHCDIKPQNILLDDYYNA--RISDFGLAKLLTLNQS-KAIRTAIRGTKGYVAPE 694
             S  I H DI+P+NI+     ++  +I +FG A+ L    + + + TA      Y APE
Sbjct: 120 --SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA----PEYYAPE 173
Query: 695 WFRNSTITAKVDVYSFGVLLLEIIS 719
             ++  ++   D++S G L+  ++S
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLS 198

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD----------RVFQDGEKEFKNEVVVI 573
           KE +GRG   +V + +    + +    AVK +D           V +  E   K   ++ 
Sbjct: 22  KEILGRGVSSVVRRCI---HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
             + H N+++L    +      LV++ +  G L  +L   +  S      I   +   + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
            LH+     I+H D+KP+NILLDD  N +++DFG +    L+  + +R ++ GT  Y+AP
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-SVCGTPSYLAP 192
Query: 694 EWFRNST------ITAKVDVYSFGVLLLEIISCRKSF 724
           E    S          +VD++S GV++  +++    F
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEV----VVIGQTH 577
           +F + +G+GSFG   K ++   +      AVK L +     +KE K+ +    V++    
Sbjct: 41  HFLKVIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLY 634
           H  LV L            V +++N G L   L      L+P        A +IA  L Y
Sbjct: 98  HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGY 154
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  I++ D+KP+NILLD   +  ++DFGL K    + S    +   GT  Y+APE
Sbjct: 155 LH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPE 209
Query: 695 WFRNSTITAKVDVYSFGVLLLEII 718
                     VD +  G +L E++
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEML 233

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 34/287 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 580
             +E +G G+  +V        +     VA+K+++    Q    E   E+  + Q HH N
Sbjct: 18  ELQEVIGSGATAVVQAAYCAPKKEK---VAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAF---QIARGL 632
           +V             LV + L+ G++   +      G  K      + IA    ++  GL
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT----LNQSKAIRTAIRGTK 688
            YLH++     IH D+K  NILL +  + +I+DFG++  L     + ++K +R    GT 
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK-VRKTFVGTP 190
Query: 689 GYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE- 746
            ++APE          K D++SFG+  +E+ +    +      +  +LT       +N+ 
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT------LQNDP 244
Query: 747 -KLDDLVEGDMEALNDI-KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             L+  V+ D E L    K   K++ +   C+Q+DP  RPT  ++L+
Sbjct: 245 PSLETGVQ-DKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELLR 287

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 32/220 (14%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV----VIGQTHH-KN 580
           E+G G+ G V+K   +  R +   +AVK++ R    G KE    ++    V+ ++H    
Sbjct: 32  EMGSGTCGQVWK---MRFRKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPY 85
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 638
           +V+  G      +  +  E +  GT A  L   ++     R    +   I + L YL E 
Sbjct: 86  IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE- 142
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               +IH D+KP NILLD+    ++ DFG++  L  +++K  R+A  G   Y+APE    
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD-RSA--GCAAYMAPERIDP 198
Query: 699 STITA-----KVDVYSFGVLLLEIIS-------CRKSFDI 726
              T      + DV+S G+ L+E+ +       C+  F++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 525 EEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E +G+G F +V + +   T  + +   V V K         ++ K E  +     H ++V
Sbjct: 32  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
            LL          +V+EF++   L         A F++     S  +R     QI   L 
Sbjct: 92  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 146
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           Y H++    IIH D+KP  +LL    N+   ++  FG+A  + L +S  +     GT  +
Sbjct: 147 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 201
Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +APE  +       VDV+  GV+L  ++S
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLS 230

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 32/286 (11%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 580
             +E +G G+  +V        +     VA+K+++    Q    E   E+  + Q HH N
Sbjct: 13  ELQEVIGSGATAVVQAAYCAPKKEK---VAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAF---QIARGL 632
           +V             LV + L+ G++   +      G  K      + IA    ++  GL
Sbjct: 70  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN---QSKAIRTAIRGTKG 689
            YLH++     IH D+K  NILL +  + +I+DFG++  L          +R    GT  
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 690 YVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE-- 746
           ++APE          K D++SFG+  +E+ +    +      +  +LT       +N+  
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT------LQNDPP 240
Query: 747 KLDDLVEGDMEALNDI-KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            L+  V+ D E L    K   K++ +   C+Q+DP  RPT  ++L+
Sbjct: 241 SLETGVQ-DKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELLR 282

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVIGQTHHKNL 581
           +G G F  VYK      + +   VA+KK+    +   K+  N     E+ ++ +  H N+
Sbjct: 18  LGEGQFATVYKA---RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHED 638
           + LL       N  LV++F+    L   +  N   L PS +++  +   + +GL YLH+ 
Sbjct: 75  IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPS-HIKAYMLMTL-QGLEYLHQH 131
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-WFR 697
               I+H D+KP N+LLD+    +++DFGLAK             +  T+ Y APE  F 
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFG 186
Query: 698 NSTITAKVDVYSFGVLLLEII 718
                  VD+++ G +L E++
Sbjct: 187 ARMYGVGVDMWAVGCILAELL 207

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD----------RVFQDGEKEFKNEVVVI 573
           KE +GRG   +V + +    + +    AVK +D           V +  E   K   ++ 
Sbjct: 9   KEILGRGVSSVVRRCI---HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
             + H N+++L    +      LV++ +  G L  +L   +  S      I   +   + 
Sbjct: 66  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
            LH+     I+H D+KP+NILLDD  N +++DFG +    L+  + +R  + GT  Y+AP
Sbjct: 126 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-EVCGTPSYLAP 179
Query: 694 EWFRNST------ITAKVDVYSFGVLLLEIISCRKSF 724
           E    S          +VD++S GV++  +++    F
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 525 EEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           E +G+G F +V + +   T  + +   V V K         ++ K E  +     H ++V
Sbjct: 30  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTL---------ASFLFGNLKPSWNLRTNIAFQIARGLL 633
            LL          +V+EF++   L         A F++     S  +R     QI   L 
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           Y H++    IIH D+KP  +LL    N+   ++  FG+A  + L +S  +     GT  +
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +APE  +       VDV+  GV+L  ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRGS+G V   V   TR    A   KK+ + F +    FK E+ ++    H N++RL  
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAA---KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA-QIIH 645
             ++  +  LV E    G     LF  +      R + A +I + +L     C    + H
Sbjct: 74  TFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 646 CDIKPQNIL-LDDYYNA--RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
            D+KP+N L L D  ++  ++ DFGLA        K +RT + GT  YV+P+        
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQVL-EGLYG 185
Query: 703 AKVDVYSFGVLL 714
            + D +S GV++
Sbjct: 186 PECDEWSAGVMM 197

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 70  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 183
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 526 EVGRGSFGIVYK------GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           E+GRG++G+V K      G I+  +     V  ++  R+  D +   +        T + 
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 580 NLVR------LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            L R       +   D   ++          T+   + G           IA  I + L 
Sbjct: 74  ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG----------KIAVSIVKALE 123
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH   S  +IH D+KP N+L++     ++ DFG++  L  + +K I     G K Y+AP
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAP 178
Query: 694 EW----FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           E           + K D++S G+ ++E+   R  +D            W       ++L 
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPF---QQLK 224
Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +VE     L   K   + V  +  C++++   RPT  +++Q
Sbjct: 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRGS+G V   V   TR    A   KK+ + F +    FK E+ ++    H N++RL  
Sbjct: 34  IGRGSWGEVKIAVQKGTRIRRAA---KKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA-QIIH 645
             ++  +  LV E    G     LF  +      R + A +I + +L     C    + H
Sbjct: 91  TFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 646 CDIKPQNIL-LDDYYNA--RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
            D+KP+N L L D  ++  ++ DFGLA        K +RT + GT  YV+P+        
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQVL-EGLYG 202
Query: 703 AKVDVYSFGVLL 714
            + D +S GV++
Sbjct: 203 PECDEWSAGVMM 214

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD----------RVFQDGEKEFKNEVVVI 573
           KE +GRG   +V + +    + +    AVK +D           V +  E   K   ++ 
Sbjct: 22  KEILGRGVSSVVRRCI---HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
             + H N+++L    +      LV++ +  G L  +L   +  S      I   +   + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
            LH+     I+H D+KP+NILLDD  N +++DFG +    L+  + +R  + GT  Y+AP
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-EVCGTPSYLAP 192
Query: 694 EWFRNST------ITAKVDVYSFGVLLLEIISCRKSF 724
           E    S          +VD++S GV++  +++    F
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 521 DNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQT 576
           D F+ E   G+G+FG V  G     +++  +VA+KK+  D  F++ E +   ++ V+   
Sbjct: 23  DRFQVERMAGQGTFGTVQLG---KEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--- 76
Query: 577 HHKNLVRL------LGFCDEGQNRL-LVYEFLNNG---TLASFLFGNLKPSWNLRTNIAF 626
           HH N+V+L      LG  D     L +V E++ +       ++    + P   L     F
Sbjct: 77  HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRTAIR 685
           Q+ R +  LH   S  + H DIKP N+L+++     ++ DFG AK L+ ++      A  
Sbjct: 137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN---VAYI 192
Query: 686 GTKGYVAPEW-FRNSTITAKVDVYSFGVLLLEII 718
            ++ Y APE  F N   T  VD++S G +  E++
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 36  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 92
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 93  LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 149
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D+    +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 205 AVDWWALGVLIYEMAAGYPPF 225

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 565 EFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNI 624
           +FKNE+ +I    ++  +   G         ++YE++ N ++  F         N    I
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 625 AFQIARGLL--------YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
             Q+ + ++        Y+H +    I H D+KP NIL+D     ++SDFG ++ +    
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--- 203
Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTIT--AKVDVYSFGVLL 714
            K I+ + RGT  ++ PE+F N +    AKVD++S G+ L
Sbjct: 204 DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 32/285 (11%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G+G FG V +  +     S   VAVK  K D +     +EF  E   + +  H ++ +L
Sbjct: 31  LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 585 LGFCDEGQNR------LLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQ--IARGL 632
           +G     + +      +++  F+ +G L +FL     G    +  L+T + F   IA G+
Sbjct: 91  VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL    S   IH D+  +N +L +     ++DFGL++ +          A +    ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
            E   ++  T   DV++FGV + EI++  ++                +    N ++ + +
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQT---------------PYAGIENAEIYNYL 252
Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
            G        +C+E++  +   C   DP  RP+   +   LE ++
Sbjct: 253 IGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 48/243 (19%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNLVRLL 585
           +GRG FG+V++      +      A+K++    ++  +E    EV  + +  H  +VR  
Sbjct: 13  LGRGGFGVVFEA---KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLF--------GNLKPSWNLRTNIA-----------F 626
               E        E L   +   +L+         NLK   N R  I             
Sbjct: 70  NAWLEKNT----TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNIL--LDDYYNARISDFGLA----------KLLTL 674
           QIA  + +LH   S  ++H D+KP NI   +DD    ++ DFGL            +LT 
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
             + A  T   GTK Y++PE    ++ + KVD++S G++L E++     F  +M E    
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRT 236
Query: 735 LTD 737
           LTD
Sbjct: 237 LTD 239

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G GSFG VY         ++  VA+KK+    +   +++++   EV  + +  H N +
Sbjct: 61  EIGHGSFGAVY---FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
           +  G         LV E+   G+ +  L  + KP   +    +     +GL YLH   S 
Sbjct: 118 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 173
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
            +IH D+K  NILL +    ++ DFG A ++      A      GT  ++APE       
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 227
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                KVDV+S G      I+C     IE+ E    L    F+      L  + + +  A
Sbjct: 228 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 272
Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L      E        C+Q+ P  RPT + +L+
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G+FG V K         +   A+KK+ R  ++      +EV ++   +H+ +VR   
Sbjct: 14  LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 587 FCDEGQN-------------RLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGL 632
              E +N               +  E+  N TL   +   NL    +    +  QI   L
Sbjct: 70  AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK-------LLTLN------QSKA 679
            Y+H   S  IIH ++KP NI +D+  N +I DFGLAK       +L L+       S  
Sbjct: 130 SYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 680 IRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEII 718
           + +AI GT  YVA E    +     K+D YS G++  E I
Sbjct: 187 LTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQTHH 578
           + K  +G+GS+G+V   +   TR +  A+ +   +++ Q   K+    K EV ++ + HH
Sbjct: 29  HLKGAIGQGSYGVVRVAIENQTR-AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---------------------------- 610
            N+ RL    ++ Q   LV E  + G L   L                            
Sbjct: 88  PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 611 ------FGNLKPSWN------LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL--D 656
                     + S +      L +NI  QI   L YLH   +  I H DIKP+N L   +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTN 204
Query: 657 DYYNARISDFGLAK-LLTLNQSKAI-RTAIRGTKGYVAPEWFR--NSTITAKVDVYSFGV 712
             +  ++ DFGL+K    LN  +    T   GT  +VAPE     N +   K D +S GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 713 LL 714
           LL
Sbjct: 265 LL 266

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 136/322 (42%), Gaps = 66/322 (20%)
Query: 506 TNLPCFSYKELEEATDNF---KEEVGRGSFG-IVYKGVILTTRTSTTAVAVKKLDRVFQD 561
            N+P F     E++  N    ++ +G GS G +V++G           VAVK++   F D
Sbjct: 4   ANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSF-----QGRPVAVKRMLIDFCD 53
Query: 562 -GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF-LNNGTLASFLFGNLKPSWN 619
               E K   ++     H N++R   +C E  +R L     L N  L   +        N
Sbjct: 54  IALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDEN 108
Query: 620 LRTNIAF-------QIARGLLYLHEDCSAQIIHCDIKPQNILL--------DDYYNAR-- 662
           L+    +       QIA G+ +LH   S +IIH D+KPQNIL+        D    A   
Sbjct: 109 LKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165
Query: 663 ---ISDFGLAKLLTLNQSKAIRTAIR---GTKGYVAPEWFRNST-------ITAKVDVYS 709
              ISDFGL K L   Q    R  +    GT G+ APE    S        +T  +D++S
Sbjct: 166 RILISDFGLCKKLDSGQX-XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
Query: 710 FGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLV 769
            G +   I+S  K      G++Y+  ++     +    LD     +M+ L+D   + +  
Sbjct: 225 MGCVFYYILSKGKH---PFGDKYSRESNIIRGIF---SLD-----EMKCLHDRSLIAEAT 273
Query: 770 MVSIWCIQEDPSLRPTMKKVLQ 791
            +    I  DP  RPT  KVL+
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLR 295

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           ++G G++G VYK  I T    T A+   +L+   +        EV ++ +  H+N++ L 
Sbjct: 41  KLGEGTYGEVYKA-IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
                     L++E+  N  L  ++  N   S  +  +  +Q+  G+ + H   S + +H
Sbjct: 100 SVIHHNHRLHLIFEYAEND-LKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLH 155
Query: 646 CDIKPQNILL-----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            D+KPQN+LL      +    +I DFGLA        +A    IR     +   W+R   
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLA--------RAFGIPIRQFTHEIITLWYRPPE 207
Query: 701 I-------TAKVDVYSFGVLLLEII 718
           I       +  VD++S   +  E++
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+FG+     ++  + +   VAVK ++R    GEK     K E++      H N+
Sbjct: 25  KDIGAGNFGVAR---LMRDKQANELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  +V E+ + G L   +    + S +       Q+  G+ Y H   + 
Sbjct: 78  VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH---AM 134
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           Q+ H D+K +N LLD     R  I+DFG +K   L+     ++A+ GT  Y+APE     
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAV-GTPAYIAPEVLLKK 191
Query: 700 TITAKV-DVYSFGVLL 714
               KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKNEVVVIGQTHHKNLVR 583
           E+GRG++G V K   +  + S   +AVK++     + E++    +  VV+  +    +V+
Sbjct: 29  EIGRGAYGSVNK---MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 584 LLGFCDEGQNRLLVYEFLNNG-----TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             G      +  +  E ++            +  ++ P   +   I     + L +L E+
Sbjct: 86  FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-EILGKITLATVKALNHLKEN 144
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              +IIH DIKP NILLD   N ++ DFG++  L  + +K   T   G + Y+APE    
Sbjct: 145 L--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDP 199
Query: 699 ST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW--AFDCYRNEKLDDLV 752
           S        + DV+S G+ L E+ + R  +             W   FD     +L  +V
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPY-----------PKWNSVFD-----QLTQVV 243
Query: 753 EGDMEALNDIKCVE---KLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +GD   L++ +  E     +     C+ +D S RP  K++L+
Sbjct: 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 62  ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 174
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      KE +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFGLAK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 63  ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 175
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 300
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 69  ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 181
Query: 684 IRGTKGYVAPEWFRNSTITA---KVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +         VD +S GV+L   +S
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKNLV 582
           E+G GSFG VY         ++  VA+KK+    +   +++++   EV  + +  H N +
Sbjct: 22  EIGHGSFGAVY---FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 78
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAFQIARGLLYLHEDCSA 641
           +  G         LV E+   G+ +  L  + KP   +    +     +GL YLH   S 
Sbjct: 79  QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 134
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---WFRN 698
            +IH D+K  NILL +    ++ DFG A ++      A      GT  ++APE       
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 188
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                KVDV+S G      I+C     IE+ E    L    F+      L  + + +  A
Sbjct: 189 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 233
Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L      E        C+Q+ P  RPT + +L+
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   Y+   + T+       V K   +    +++   E+ +     + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
           F ++     +V E     +L          +         Q  +G+ YLH +   ++IH 
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHR 166
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVD 706
           D+K  N+ L+D  + +I DFGLA  +  +  +  +  + GT  Y+APE       + +VD
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 707 VYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCV 765
           ++S G +L  ++  +  F+   + E Y  +    +   R+                I  V
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPV 268
Query: 766 EKLVMVSIWCIQEDPSLRPTMKKVL 790
              ++  +  +  DP+LRP++ ++L
Sbjct: 269 ASALIRRM--LHADPTLRPSVAELL 291

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           + E+ ++ + +H  ++++  F D  ++  +V E +  G L   + GN +          +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTA 683
           Q+   + YLHE+    IIH D+KP+N+LL         +I+DFG +K+  L ++  +RT 
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT- 314
Query: 684 IRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIIS 719
           + GT  Y+APE   +   +     VD +S GV+L   +S
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 42  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 99  LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 155
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF 231

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 70  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 183
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + +       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   Y+   + T+       V K   +    +++   E+ +     + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
           F ++     +V E     +L          +         Q  +G+ YLH +   ++IH 
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHR 166
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVD 706
           D+K  N+ L+D  + +I DFGLA  +  +  +  +  + GT  Y+APE       + +VD
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 707 VYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCV 765
           ++S G +L  ++  +  F+   + E Y  +    +   R+             +N +   
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH-------------INPVASA 271
Query: 766 EKLVMVSIWCIQEDPSLRPTMKKVL 790
               M     +  DP+LRP++ ++L
Sbjct: 272 LIRRM-----LHADPTLRPSVAELL 291

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLV 582
           +G+G +G V++   +T   +    A+K L +             K E  ++ +  H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHED 638
            L+     G    L+ E+L+ G L    F  L+       + A     +I+  L +LH+ 
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               II+ D+KP+NI+L+   + +++DFGL K  +++      T   GT  Y+APE    
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFC-GTIEYMAPEILMR 195
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 745
           S     VD +S G L+ ++++    F    GE      D    C  N
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ ++ +    F
Sbjct: 218 AVDWWALGVLIYQMAAGYPPF 238

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      KE +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFGLAK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+FG+     ++  + S   VAVK ++R    GEK     K E++      H N+
Sbjct: 25  KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLRHPNI 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  +V E+ + G L   +    + S +       Q+  G+ Y H   + 
Sbjct: 78  VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           Q+ H D+K +N LLD     R  I DFG +K   L+       +  GT  Y+APE     
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKK 191
Query: 700 TITAKV-DVYSFGVLL 714
               KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 27  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 86
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 87  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 142
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 199
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 200 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 253
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 254 --DIPFEHDEEIIRGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 292
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 293 RPTFEEI 299

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLV 582
           +G+G +G V++   +T   +    A+K L +             K E  ++ +  H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHED 638
            L+     G    L+ E+L+ G L    F  L+       + A     +I+  L +LH+ 
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               II+ D+KP+NI+L+   + +++DFGL K         +     GT  Y+APE    
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI--HDGTVTHXFCGTIEYMAPEILMR 195
Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 745
           S     VD +S G L+ ++++    F    GE      D    C  N
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   Y+   + T+       V K   +    +++   E+ +     + ++V   G
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
           F ++     +V E     +L          +         Q  +G+ YLH +   ++IH 
Sbjct: 94  FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHR 150
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVD 706
           D+K  N+ L+D  + +I DFGLA  +  +  +  +  + GT  Y+APE       + +VD
Sbjct: 151 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVD 208
Query: 707 VYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCV 765
           ++S G +L  ++  +  F+   + E Y  +    +   R+                I  V
Sbjct: 209 IWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPV 252
Query: 766 EKLVMVSIWCIQEDPSLRPTMKKVL 790
              ++  +  +  DP+LRP++ ++L
Sbjct: 253 ASALIRRM--LHADPTLRPSVAELL 275

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRL 584
           +G GS+G V +      +     VA+KK+ RVF+D    K    E+ ++ + +H ++V++
Sbjct: 61  IGTGSYGHVCEAY---DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 585 LGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           L        ++     +V E  ++     F         +++T + + +  G+ Y+H   
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT-LLYNLLVGVKYVH--- 173
Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAK----------------------LLTLNQS 677
           SA I+H D+KP N L++   + ++ DFGLA+                      L+T   +
Sbjct: 174 SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 678 KAIRTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKS 723
           K ++   R   G+V   W+R   +       T  +DV+S G +  E+++  K 
Sbjct: 234 KNLK---RQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 70  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 183
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF 259

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   Y+   + T+       V K   +    +++   E+ +     + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHC 646
           F ++     +V E     +L          +         Q  +G+ YLH +   ++IH 
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHR 166
Query: 647 DIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVD 706
           D+K  N+ L+D  + +I DFGLA  +  +  +  +  + GT  Y+APE       + +VD
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 707 VYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCV 765
           ++S G +L  ++  +  F+   + E Y  +    +   R+                I  V
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----------------INPV 268
Query: 766 EKLVMVSIWCIQEDPSLRPTMKKVL 790
              ++  +  +  DP+LRP++ ++L
Sbjct: 269 ASALIRRM--LHADPTLRPSVAELL 291

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 44/241 (18%)
Query: 518 EATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVI 573
           +  DN+  K  +GRGS+G VY   +   + +   VA+KK++R+F+D    K    E+ ++
Sbjct: 25  KVPDNYEIKHLIGRGSYGYVY---LAYDKNANKNVAIKKVNRMFEDLIDCKRILREITIL 81
Query: 574 GQTHHKNLVRLLGFCD-----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            +     ++RL          +     +V E  ++     F         +++T I + +
Sbjct: 82  NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKT-ILYNL 140
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-------- 680
             G  ++HE   + IIH D+KP N LL+   + +I DFGLA+  T+N  K I        
Sbjct: 141 LLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLAR--TINSDKDIHIVNDLEE 195
Query: 681 -----------RTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRK 722
                      +   +    +V   W+R   +       T  +D++S G +  E+++  K
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
Query: 723 S 723
           S
Sbjct: 256 S 256

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+FG+     ++  + S   VAVK ++R    GEK     K E++      H N+
Sbjct: 24  KDIGSGNFGV---ARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 76
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  +V E+ + G L   +    + S +       Q+  G+ Y H   + 
Sbjct: 77  VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 133
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           Q+ H D+K +N LLD     R  I DFG +K   L+       +  GT  Y+APE     
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKK 190
Query: 700 TITAKV-DVYSFGVLL 714
               KV DV+S GV L
Sbjct: 191 EYDGKVADVWSCGVTL 206

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           +F +++G G+FG+     ++  + +   VAVK ++R     E   + E++      H N+
Sbjct: 23  DFVKDIGSGNFGV---ARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNI 78
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  ++ E+ + G L   +    + S +       Q+  G+ Y H   S 
Sbjct: 79  VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SM 135
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           QI H D+K +N LLD     R  I DFG +K   L+       +  GT  Y+APE     
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK---STVGTPAYIAPEVLLRQ 192
Query: 700 TITAKV-DVYSFGVLL 714
               K+ DV+S GV L
Sbjct: 193 EYDGKIADVWSCGVTL 208

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 27  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 86
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 87  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 142
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 199
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 200 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 253
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R            E  + I+          WC+   PS 
Sbjct: 254 --DIPFEHDEEIIRGQVF--FRQRV-------SXECQHLIR----------WCLALRPSD 292
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 293 RPTFEEI 299

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 32  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 91
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+ E         
Sbjct: 92  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQ 147
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 204
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 205 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 258
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R            E  + I+          WC+   PS 
Sbjct: 259 --DIPFEHDEEIIRGQVF--FRQRV-------SXECQHLIR----------WCLALRPSD 297
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 298 RPTFEEI 304

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 13  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 73  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 240 --DIPFEHDEEIIGGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 278
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 279 RPTFEEI 285

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 12  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 72  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 239 --DIPFEHDEEIIRGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 277
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 278 RPTFEEI 284

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 12  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 72  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 239 --DIPFEHDEEIIGGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 277
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 278 RPTFEEI 284

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 13  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 73  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 240 --DIPFEHDEEIIGGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 278
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 279 RPTFEEI 285

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 12  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 72  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R       V  + + L  I+          WC+   PS 
Sbjct: 239 --DIPFEHDEEIIGGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSD 277
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 278 RPTFEEI 284

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 44  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 100
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 157
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 213 AVDWWALGVLIYEMAAGYPPF 233

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 12  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 71
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 72  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 127
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 184
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 185 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 238
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R            E  + I+          WC+   PS 
Sbjct: 239 --DIPFEHDEEIIGGQVF--FRQRV-------SXECQHLIR----------WCLALRPSD 277
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 278 RPTFEEI 284

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 13  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 73  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R            E  + I+          WC+   PS 
Sbjct: 240 --DIPFEHDEEIIGGQVF--FRQRV-------SXECQHLIR----------WCLALRPSD 278
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 279 RPTFEEI 285

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 46/307 (14%)
Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           +R +P +    T L     KE  E+       +G G FG VY G+ ++         V+K
Sbjct: 13  LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK 72
Query: 555 LDRVFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
            DR+   GE         EVV++ +       ++RLL + +   + +L+   L       
Sbjct: 73  -DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQ 128
Query: 609 FLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARI 663
            LF  +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKL 185
Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRK 722
            DFG   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++    
Sbjct: 186 IDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-- 239
Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
             DI    +  I+    F  +R            E  + I+          WC+   PS 
Sbjct: 240 --DIPFEHDEEIIGGQVF--FRQRV-------SXECQHLIR----------WCLALRPSD 278
Query: 783 RPTMKKV 789
           RPT +++
Sbjct: 279 RPTFEEI 285

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 35  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 91
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 92  LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 148
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNK 203
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 204 AVDWWALGVLIYEMAAGYPPF 224

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+AP    +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 197 IGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 251
Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-- 309
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 699 STI-TAKVDVYSFGVLLLEIISCRKSF 724
                +  D +S G +L +++     F
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPF 391

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 196 IGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 250
Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-- 308
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 309 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 363
Query: 699 STI-TAKVDVYSFGVLLLEIISCRKSF 724
                +  D +S G +L +++     F
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSPF 390

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 197 IGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 251
Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-- 309
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 699 STI-TAKVDVYSFGVLLLEIISCRKSF 724
                +  D +S G +L +++     F
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPF 391

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRV---FQDGEKEFKNEVVVIG--QTHHK 579
           +GRG FG VY       R + T    A+K LD+     + GE    NE +++    T   
Sbjct: 197 IGRGGFGEVY-----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 251
Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +  + +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-- 309
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            +  +++ D+KP NILLD++ + RISD GLA     + SK    A  GT GY+APE  + 
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQK 364
Query: 699 STI-TAKVDVYSFGVLLLEIISCRKSF 724
                +  D +S G +L +++     F
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPF 391

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 42  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 99  LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 155
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF 231

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNIL--LDDYYNARISDFGLAK---------- 670
           +I  QIA  + +LH   S  ++H D+KP NI   +DD    ++ DFGL            
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV--VKVGDFGLVTAMDQDEEEQT 222
Query: 671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
           +LT   + A      GTK Y++PE    +  + KVD++S G++L E++    SF  +M E
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQM-E 278
Query: 731 EYAILTD 737
              I+TD
Sbjct: 279 RVRIITD 285

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG+FG V      +TR       + K + + +     F  E  ++   +   +V+L  
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSAQIIH 645
              + +   +V E++  G L      NL  ++++    A F  A  +L L    S   IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFR----NS 699
            D+KP N+LLD   + +++DFG    + +N+   +R  TA+ GT  Y++PE  +    + 
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 700 TITAKVDVYSFGVLLLEII 718
               + D +S GV L E++
Sbjct: 254 YYGRECDWWSVGVFLYEML 272

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 13  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K   ++    ++T   GT  Y+APE   ++   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG+FG V      +TR       + K + + +     F  E  ++   +   +V+L  
Sbjct: 82  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSAQIIH 645
              + +   +V E++  G L      NL  ++++    A F  A  +L L    S   IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFR----NS 699
            D+KP N+LLD   + +++DFG    + +N+   +R  TA+ GT  Y++PE  +    + 
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 700 TITAKVDVYSFGVLLLEII 718
               + D +S GV L E++
Sbjct: 254 YYGRECDWWSVGVFLYEML 272

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +GRG+FG V      +TR       + K + + +     F  E  ++   +   +V+L  
Sbjct: 77  IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSAQIIH 645
              + +   +V E++  G L      NL  ++++    A F  A  +L L    S   IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFR----NS 699
            D+KP N+LLD   + +++DFG    + +N+   +R  TA+ GT  Y++PE  +    + 
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 248
Query: 700 TITAKVDVYSFGVLLLEII 718
               + D +S GV L E++
Sbjct: 249 YYGRECDWWSVGVFLYEML 267

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 13  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K   ++    ++T   GT  Y+APE   ++   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----K 564
           P    KE  E+       +G G FG VY G+ ++         V+K DR+   GE     
Sbjct: 21  PHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGT 79
Query: 565 EFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT 622
               EVV++ +       ++RLL + +   + +L+   L        LF  +     L+ 
Sbjct: 80  RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQE 136
Query: 623 NIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQS 677
            +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DFG   LL     
Sbjct: 137 ELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----K 189
Query: 678 KAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 736
             + T   GT+ Y  PEW R      +   V+S G+LL +++      DI    +  I+ 
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIR 245
Query: 737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
              F  +R            E  + I+          WC+   PS RPT +++
Sbjct: 246 GQVF--FRQRV-------SXECQHLIR----------WCLALRPSDRPTFEEI 279

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 16  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 71
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 72  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 128
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K   ++    ++T   GT  Y+APE   ++   
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 186
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPF 208

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + S    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT   +APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++  + +    A+K LD+      K+ +   NE  +    +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 18  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 73
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 74  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 130
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K        A      GT  Y+APE   ++   
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 579
             K  +G G++G+V      T + +   VA+KK++  F       +   E+ ++    H+
Sbjct: 14  QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 580 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           N++ +         E  N + + + L    L   +   +    +++  I +Q  R +  L
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG----YV 691
           H    + +IH D+KP N+L++   + ++ DFGLA++  +++S A  +   G +     YV
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEYV 183
Query: 692 APEWFRNSTI---TAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           A  W+R   +   +AK    +DV+S G +L E+   R  F    G +Y       F    
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG--- 237
Query: 745 NEKLDDLVEGDMEALNDIKCVE 766
                  + G   + ND++C+E
Sbjct: 238 -------IIGTPHSDNDLRCIE 252

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 46/304 (15%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 2   APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 60
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 61  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 117
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 174
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFD 725
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++      D
Sbjct: 175 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----D 226
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           I    +  I+    F  +R       V  + + L  I+          WC+   PS RPT
Sbjct: 227 IPFEHDEEIIRGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSDRPT 267
Query: 786 MKKV 789
            +++
Sbjct: 268 FEEI 271

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 581 LVRLLGFCDEGQNRLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           ++RLL + +   + +L+ E +     L  F+         L  +  +Q+   + + H +C
Sbjct: 75  VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NC 133
Query: 640 SAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
              ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW R 
Sbjct: 134 G--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 187
Query: 699 STITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
                +   V+S G+LL +++      DI    +  I+    F  +R       V  + +
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQR-----VSSECQ 236
Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            L  I+          WC+   PS RPT +++
Sbjct: 237 HL--IR----------WCLALRPSDRPTFEEI 256

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 37/236 (15%)
Query: 518 EATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVI 573
              DN+  K  +GRGS+G VY   +   + +   VA+KK++R+F+D    K    E+ ++
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVY---LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79
Query: 574 GQTHHKNLVRLLGFCDEGQ-----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
            +     ++RL                +V E  ++     F         +++T I + +
Sbjct: 80  NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT-ILYNL 138
Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-------- 680
             G  ++HE   + IIH D+KP N LL+   + ++ DFGLA+ +   +   I        
Sbjct: 139 LLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 681 ------RTAIRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKS 723
                 +   +    +V   W+R   +       T  +D++S G +  E+++  +S
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 46/304 (15%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 3   APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 61
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 62  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 118
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 175
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFD 725
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++      D
Sbjct: 176 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----D 227
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           I    +  I+    F  +R       V  + + L  I+          WC+   PS RPT
Sbjct: 228 IPFEHDEEIIRGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSDRPT 268
Query: 786 MKKV 789
            +++
Sbjct: 269 FEEI 272

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 46/304 (15%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 22  APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 80
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 81  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 137
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 138 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 194
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFD 725
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++      D
Sbjct: 195 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----D 246
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           I    +  I+    F  +R       V  + + L  I+          WC+   PS RPT
Sbjct: 247 IPFEHDEEIIRGQVF--FRQR-----VSSECQHL--IR----------WCLALRPSDRPT 287
Query: 786 MKKV 789
            +++
Sbjct: 288 FEEI 291

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 13  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K        A      GT  Y+APE   ++   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 89  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 140
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGH 198
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 246
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 247 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 285

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 3   APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 61
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 62  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 118
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 175
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFD 725
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++      D
Sbjct: 176 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----D 227
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           I    +  I+    F  +R            E  + I+          WC+   PS RPT
Sbjct: 228 IPFEHDEEIIRGQVF--FRQRV-------SXECQHLIR----------WCLALRPSDRPT 268
Query: 786 MKKV 789
            +++
Sbjct: 269 FEEI 272

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 2   APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 60
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 61  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 117
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 174
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFD 725
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++      D
Sbjct: 175 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----D 226
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
           I    +  I+    F  +R            E  + I+          WC+   PS RPT
Sbjct: 227 IPFEHDEEIIRGQVF--FRQRV-------SXECQHLIR----------WCLALRPSDRPT 267
Query: 786 MKKV 789
            +++
Sbjct: 268 FEEI 271

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 160
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGH 218
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 266
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 267 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 305

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E++  G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+L+D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 158
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGH 216
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 264
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 265 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 303

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+FG+     ++  + S   VAVK ++R    GEK     K E++      H N+
Sbjct: 25  KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  +V E+ + G L   +    + S +       Q+  G+ Y H   + 
Sbjct: 78  VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           Q+ H D+K +N LLD     R  I  FG +K   L+       +  GT  Y+APE     
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLKK 191
Query: 700 TITAKV-DVYSFGVLL 714
               KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGH 194
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 242
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 243 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 281

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 46/288 (15%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNE 569
           KE  E+       +G G FG VY G+ ++         V+K DR+   GE         E
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPME 62
Query: 570 VVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-- 625
           VV++ +       ++RLL + +   + +L+   L        LF  +     L+  +A  
Sbjct: 63  VVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARS 119
Query: 626 --FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRT 682
             +Q+   + + H +C   ++H DIK +NIL+D +    ++ DFG   LL       + T
Sbjct: 120 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYT 172
Query: 683 AIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 741
              GT+ Y  PEW R      +   V+S G+LL +++      DI    +  I+    F 
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFF 228
Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
             R       V  + + L  I+          WC+   PS RPT +++
Sbjct: 229 RQR-------VSSECQHL--IR----------WCLALRPSDRPTFEEI 257

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 13  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K        A      GT  Y+APE   ++   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  + S    A+K   K + + +     F  E  ++   +   +V+
Sbjct: 83  IGRGAFGEVQ---LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-FQIARGLLYLHEDCSAQ 642
           L     + +   +V E++  G L      NL  ++++    A F  A  +L L    S  
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR----N 698
           +IH D+KP N+LLD + + +++DFG    +         TA+ GT  Y++PE  +    +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGD 253
Query: 699 STITAKVDVYSFGVLLLEII 718
                + D +S GV L E++
Sbjct: 254 GYYGRECDWWSVGVFLFEML 273

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG   K +++  + +    A+K L +   + +D       E  V+  T H  L  
Sbjct: 13  LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      +         +I   L YLH   S  
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ DIK +N++LD   + +I+DFGL K        A      GT  Y+APE   ++   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 136
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIAPEVLSKKGH 194
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 242
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 243 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 281

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG V   +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 18  LGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 73
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 74  ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 131
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K     +  A      GT  Y+APE   ++   
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLAPEVLEDNDYG 189
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPF 211

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH-KNLVRL 584
           ++GRG +  V++ + +T   +   V VK L  V    + + K E+ ++       N++ L
Sbjct: 44  KLGRGKYSEVFEAINIT---NNEKVVVKILKPV---KKNKIKREIKILENLRGGPNIITL 97
Query: 585 LGFCDEGQNRL--LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
                +  +R   LV+E +NN      L+  L   +++R  + ++I + L Y H   S  
Sbjct: 98  ADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMG 151
Query: 643 IIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           I+H D+KP N+++D ++   R+ D+GLA+     Q   +R A R  KG   PE   +  +
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQM 208
Query: 702 -TAKVDVYSFGVLLLEIISCRKSF 724
               +D++S G +L  +I  ++ F
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 113/281 (40%), Gaps = 43/281 (15%)
Query: 526 EVGRGSFGIVYK------GVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK 579
           E+GRG++G+V K      G I   +     V  ++  R+  D +   +        T + 
Sbjct: 41  ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAFQIARGLLY 634
            L R        +  + +   L + +L  F       G   P  ++   IA  I + L +
Sbjct: 101 ALFR--------EGDVWICXELXDTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKALEH 151
Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH   S  +IH D+KP N+L++     +  DFG++  L  + +K I     G K Y APE
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPE 206
Query: 695 W----FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD 750
                      + K D++S G+  +E+   R  +D            W       ++L  
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-----------SWGTPF---QQLKQ 252
Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +VE     L   K   + V  +  C++++   RPT  ++ Q
Sbjct: 253 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG V   +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 17  LGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 72
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 73  ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 130
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K     +  A      GT  Y+APE   ++   
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG V   +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 16  LGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 71
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 72  ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 129
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K     +  A      GT  Y+APE   ++   
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLAPEVLEDNDYG 187
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPF 209

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G F   ++     T+       V K   +     ++   E+ +     H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 587 FCDEGQNRLLVYEFLNNGTLASF-----LFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           F ++     +V E     +L             +  + LR     QI  G  YLH +   
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRN--- 134
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           ++IH D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGH 192
Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND 761
           + +VDV+S G ++  ++  +  F      E + L +      +NE          + +N 
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPF------ETSCLKETYLRIKKNEY------SIPKHINP 240
Query: 762 IKC--VEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLP 802
           +    ++K+       +Q DP+ RPT+ ++L       G +   LP
Sbjct: 241 VAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 279

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG V   +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 159 LGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 214
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 272
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K   +     ++T   GT  Y+APE   ++   
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 330
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPF 352

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 16  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 75  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +C   ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 132 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R       V  
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQR-----VSS 233
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           + + L  I+          WC+   PS RPT +++
Sbjct: 234 ECQHL--IR----------WCLALRPSDRPTFEEI 256

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR 557
           +P +    T L     KE  E+       +G G FG VY G+ ++         V+K DR
Sbjct: 3   APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DR 61
Query: 558 VFQDGE----KEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF 611
           +   GE         EVV++ +       ++RLL + +   + +L+   L        LF
Sbjct: 62  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLF 118
Query: 612 GNLKPSWNLRTNIA----FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDF 666
             +     L+  +A    +Q+   + + H +C   ++H DIK +NIL+D +    ++ DF
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDF 175
Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEII 718
           G   LL       + T   GT+ Y  PEW R      +   V+S G+LL +++
Sbjct: 176 GSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK---EFKNEVVVIGQTHHKNL 581
           +++G G+FG+     ++  + S   VAVK ++R    GEK     K E++      H N+
Sbjct: 25  KDIGSGNFGVAR---LMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHPNI 77
Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           VR         +  +V E+ + G L   +    + S +       Q+  G+ Y H   + 
Sbjct: 78  VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AM 134
Query: 642 QIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           Q+ H D+K +N LLD     R  I  FG +K   L+ S+   T   GT  Y+APE     
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKDTV--GTPAYIAPEVLLKK 191
Query: 700 TITAKV-DVYSFGVLL 714
               KV DV+S GV L
Sbjct: 192 EYDGKVADVWSCGVTL 207

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +G+G+FG V   +++  + +    A+K L +   V +D       E  V+  + H  L  
Sbjct: 156 LGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 211
Query: 584 LLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
            L +  +  +RL  V E+ N G L   L      S +       +I   L YLH +    
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 269
Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           +++ D+K +N++LD   + +I+DFGL K   +     ++T   GT  Y+APE   ++   
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 327
Query: 703 AKVDVYSFGVLLLEIISCRKSF 724
             VD +  GV++ E++  R  F
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPF 349

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 76  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +C   ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 133 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R       V  
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQR-----VSS 234
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           + + L  I+          WC+   PS RPT +++
Sbjct: 235 ECQHL--IR----------WCLALRPSDRPTFEEI 257

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   L +
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   L +
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    + S       A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 46/288 (15%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNE 569
           KE  E+       +G G FG VY G+ ++         V+K DR+   GE         E
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPME 62
Query: 570 VVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-- 625
           VV++ +       ++RLL + +   + +L+   L        LF  +     L+  +A  
Sbjct: 63  VVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARS 119
Query: 626 --FQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRT 682
             +Q+   + + H +C   ++H DIK +NIL+D +    ++ DFG   LL       + T
Sbjct: 120 FFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYT 172
Query: 683 AIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 741
              GT+ Y  PEW R      +   V+S G+LL +++      DI    +  I+    F 
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF- 227
Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            +R       V  + + L  I+          WC+   PS RPT +++
Sbjct: 228 -FRQR-----VSSECQHL--IR----------WCLALRPSDRPTFEEI 257

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   LV+
Sbjct: 49  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    +         A QI     YLH   S  +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 162
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF 238

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 579
             K  +G G++G+V      T + +   VA+KK++  F       +   E+ ++    H+
Sbjct: 14  QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 580 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           N++ +         E  N + + + L    L   +   +    +++  I +Q  R +  L
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG----YV 691
           H    + +IH D+KP N+L++   + ++ DFGLA++  +++S A  +   G +     +V
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMVEFV 183
Query: 692 APEWFRNSTI---TAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           A  W+R   +   +AK    +DV+S G +L E+   R  F    G +Y       F    
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG--- 237
Query: 745 NEKLDDLVEGDMEALNDIKCVE 766
                  + G   + ND++C+E
Sbjct: 238 -------IIGTPHSDNDLRCIE 252

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 71  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +C   ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 128 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R       V  
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQR-----VSS 229
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           + + L  I+          WC+   PS RPT +++
Sbjct: 230 ECQHL--IR----------WCLALRPSDRPTFEEI 252

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 15  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 74  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +C   ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 131 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 183
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R       V  
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQR-----VSS 232
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           + + L  I+          WC+   PS RPT +++
Sbjct: 233 ECQHL--IR----------WCLALRPSDRPTFEEI 255

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 71  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
            +C   ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 128 -NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R       V  
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVF--FRQR-----VSS 229
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           + + L  I+          WC+   PS RPT +++
Sbjct: 230 ECQHL--IR----------WCLALRPSDRPTFEEI 252

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 46/275 (16%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE----KEFKNEVVVIGQTHH--KN 580
           +G G FG VY G+ ++         V+K DR+   GE         EVV++ +       
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEK-DRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLH 636
           ++RLL + +   + +L+   L        LF  +     L+  +A    +Q+   + + H
Sbjct: 71  VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 637 EDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              +  ++H DIK +NIL+D +    ++ DFG   LL       + T   GT+ Y  PEW
Sbjct: 128 ---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 696 FRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
            R      +   V+S G+LL +++      DI    +  I+    F  +R          
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVF--FRQRV------- 227
Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
             E  + I+          WC+   PS RPT +++
Sbjct: 228 SXECQHLIR----------WCLALRPSDRPTFEEI 252

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 29/228 (12%)
Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVV-- 571
           +E  EA       +G+G FG V+ G  LT R     VA+K + R    G     + V   
Sbjct: 26  REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 572 --------VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN 623
                   V     H  ++RLL + +  +  +LV E       A  LF  +     L   
Sbjct: 83  LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEG 139
Query: 624 IAF----QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-ARISDFGLAKLLTLNQSK 678
            +     Q+   + + H   S  ++H DIK +NIL+D     A++ DFG   LL      
Sbjct: 140 PSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HD 192
Query: 679 AIRTAIRGTKGYVAPEWF-RNSTITAKVDVYSFGVLLLEIISCRKSFD 725
              T   GT+ Y  PEW  R+        V+S G+LL +++     F+
Sbjct: 193 EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRL 584
           +G GS+G V K V+ +      AV + K  ++ +  +GE   K E+ ++ +  HKN+++L
Sbjct: 13  LGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 585 LG--FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAF--QIARGLLYLHEDCS 640
           +   + +E Q   +V E+   G +   L    +  + +     +  Q+  GL YLH   S
Sbjct: 72  VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---S 127
Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-S 699
             I+H DIKP N+LL      +IS  G+A+ L    +       +G+  +  PE      
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD 187
Query: 700 TITA-KVDVYSFGVLLLEIISCRKSFD 725
           T +  KVD++S GV L  I +    F+
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 40/262 (15%)
Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--EVVVIGQTHHK 579
             K  +G G++G+V      T + +   VA+KK++  F       +   E+ ++    H+
Sbjct: 14  QLKSLLGEGAYGVVCSA---THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHE 69
Query: 580 NLVRLLGFCD----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           N++ +         E  N + + + L    L   +   +    +++  I +Q  R +  L
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVL 128
Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG----YV 691
           H    + +IH D+KP N+L++   + ++ DFGLA++  +++S A  +   G +      V
Sbjct: 129 H---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSGMTEXV 183
Query: 692 APEWFRNSTI---TAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           A  W+R   +   +AK    +DV+S G +L E+   R  F    G +Y       F    
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRHQLLLIFG--- 237
Query: 745 NEKLDDLVEGDMEALNDIKCVE 766
                  + G   + ND++C+E
Sbjct: 238 -------IIGTPHSDNDLRCIE 252

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK 567
           LP    + + +     K+ +G+G +G V+ G     +     VAVK    VF   E+   
Sbjct: 27  LPLLVQRTIAKQIQMVKQ-IGKGRYGEVWMG-----KWRGEKVAVK----VFFTTEEASW 76
Query: 568 NEVVVIGQT---HHKNLVRLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNL 620
                I QT    H+N++  +    +G        L+ ++  NG+L  +L      + ++
Sbjct: 77  FRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM 136
Query: 621 RTNIAFQIARGLLYLHEDC-SAQ----IIHCDIKPQNILLDDYYNARISDFGLA-KLLTL 674
              +A+    GL +LH +  S Q    I H D+K +NIL+       I+D GLA K ++ 
Sbjct: 137 -LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
Query: 675 NQSKAIRTAIR-GTKGYVAPEWF-----RN---STITAKVDVYSFGVLLLEIISCRKSFD 725
                I    R GTK Y+ PE       RN   S I A  D+YSFG++L E+   R+   
Sbjct: 196 TNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA--DMYSFGLILWEV--ARRCVS 251
Query: 726 IEMGEEYAILTDWAFDCYRNEKLDDLVEGD--MEALNDIKCVEKL 768
             + EEY +               DLV  D   E + +I C++KL
Sbjct: 252 GGIVEEYQL------------PYHDLVPSDPSYEDMREIVCIKKL 284

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQTHHKNLVR 583
           +G GSFG V   +++    +    A+K LD+      K+ +   NE  ++   +   L +
Sbjct: 50  LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTK 106
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L     +  N  +V E+   G + S L    +         A QI     YLH   S  +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDL 163
Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITA 703
           I+ D+KP+N+++D     +++DFG AK     + K     + GT  Y+APE   +     
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 704 KVDVYSFGVLLLEIISCRKSF 724
            VD ++ GVL+ E+ +    F
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF 239

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 514 KELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKN 568
           KE+    D+F+  + +GRG+F  V    ++  + +    A+K +++  + + GE   F+ 
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEV---AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 569 E--VVVIGQTHHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTN 623
           E  V+V G    +  +  L F  + +N L LV E+   G L + L  FG   P+   R  
Sbjct: 111 ERDVLVNGD---RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMAR-- 165
Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
             F +A  ++ +        +H DIKP NILLD   + R++DFG    L L     +R+ 
Sbjct: 166 --FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSL 221
Query: 684 IR-GTKGYVAPE 694
           +  GT  Y++PE
Sbjct: 222 VAVGTPDYLSPE 233

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-----------KEFKNEVVVIGQ 575
           +  GS+G V  GV     +    VA+K++     DG            K    E+ ++  
Sbjct: 30  ISSGSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 576 THHKNLVRL----LGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIAR 630
            HH N++ L    + F +   ++L +   L    LA  +    +  S        + I  
Sbjct: 86  FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL  LHE   A ++H D+ P NILL D  +  I DF LA+  T + +K           Y
Sbjct: 146 GLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---------HY 193
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           V   W+R   +       T  VD++S G ++ E+ + +  F
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-----------KEFKNEVVVIGQ 575
           +  GS+G V  GV     +    VA+K++     DG            K    E+ ++  
Sbjct: 30  ISSGSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 576 THHKNLVRL----LGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIAR 630
            HH N++ L    + F +   ++L +   L    LA  +    +  S        + I  
Sbjct: 86  FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL  LHE   A ++H D+ P NILL D  +  I DF LA+  T + +K           Y
Sbjct: 146 GLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---------HY 193
Query: 691 VAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKSF 724
           V   W+R   +       T  VD++S G ++ E+ + +  F
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 22/261 (8%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE------FKNEVVVIGQTHHKN 580
           +G G+FG V+  V            +KK ++V +D   E         E+ ++ +  H N
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKK-EKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWN--LRTNIAFQIARGLLYLHED 638
           ++++L   +      LV E   +G L  F F +  P  +  L + I  Q+   + YL   
Sbjct: 91  IIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR- 697
               IIH DIK +NI++ + +  ++ DFG A    L + K   T   GT  Y APE    
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYT-FCGTIEYCAPEVLMG 203
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
           N     +++++S GV L  ++     F ++E   E AI   +      +++L  LV G +
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV----SKELMSLVSGLL 259
Query: 757 EALNDIKCVEKLVMVSIWCIQ 777
           + + + +   + ++   W  Q
Sbjct: 260 QPVPERRTTLEKLVTDPWVTQ 280

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 579
           E++G G FG V+K V    R      A+K+  +       E+    EV    V+GQ  H 
Sbjct: 15  EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 69
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 635
           ++VR      E  + L+  E+ N G+LA  +  N +     +     ++  Q+ RGL Y+
Sbjct: 70  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 636 HEDCSAQIIHCDIKPQNILL 655
           H   S  ++H DIKP NI +
Sbjct: 130 H---SMSLVHMDIKPSNIFI 146

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 579
           E++G G FG V+K V    R      A+K+  +       E+    EV    V+GQ  H 
Sbjct: 17  EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 71
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 635
           ++VR      E  + L+  E+ N G+LA  +  N +     +     ++  Q+ RGL Y+
Sbjct: 72  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 636 HEDCSAQIIHCDIKPQNILL 655
           H   S  ++H DIKP NI +
Sbjct: 132 H---SMSLVHMDIKPSNIFI 148

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 579
           E++G G FG V+K V    R      A+K+  +       E+    EV    V+GQ  H 
Sbjct: 15  EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 69
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 635
           ++VR      E  + L+  E+ N G+LA  +  N +     +     ++  Q+ RGL Y+
Sbjct: 70  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 636 HEDCSAQIIHCDIKPQNILL 655
           H   S  ++H DIKP NI +
Sbjct: 130 H---SMSLVHMDIKPSNIFI 146

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVR 583
           E +G G++  V   V L    +    AVK +++           EV  + Q   +KN++ 
Sbjct: 19  ELLGEGAYAKVQGAVSLQ---NGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           L+ F ++     LV+E L  G++ + +      +    + +   +A  L +LH   +  I
Sbjct: 76  LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGI 132
Query: 644 IHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIR-----GTKGYVAPEW 695
            H D+KP+NIL +        +I DF L   + LN S    T        G+  Y+APE 
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 696 FRNSTITA-----KVDVYSFGVLLLEIIS 719
               T  A     + D++S GV+L  ++S
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLS 221

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEV---VVIGQTHHK 579
           E++G G FG V+K V    R      A+K+  +       E+    EV    V+GQ  H 
Sbjct: 13  EKIGSGEFGSVFKCV---KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HS 67
Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYL 635
           ++VR      E  + L+  E+ N G+LA  +  N +     +     ++  Q+ RGL Y+
Sbjct: 68  HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 636 HEDCSAQIIHCDIKPQNILL 655
           H   S  ++H DIKP NI +
Sbjct: 128 H---SMSLVHMDIKPSNIFI 144

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 43/275 (15%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT----HHKNLV 582
           +G GS+G V+K   + ++      AVK+    F+ G K+   ++  +G       H   V
Sbjct: 65  LGHGSYGEVFK---VRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASF--LFGNLKPS---WNLRTNIAFQIARGLLYLHE 637
           RL    +EG    L  E L   +L      +G   P    W    +    +A    +LH 
Sbjct: 121 RLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HLH- 174
Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             S  ++H D+KP NI L      ++ DFGL  L+ L  + A      G   Y+APE  +
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQ-EGDPRYMAPELLQ 229
Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME 757
            S  TA  DV+S G+ +LE ++C                      +  E    L +G + 
Sbjct: 230 GSYGTA-ADVFSLGLTILE-VACNMELP-----------------HGGEGWQQLRQGYLP 270
Query: 758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
                    +L  V +  ++ DP LR T + +L +
Sbjct: 271 PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVR 583
           +GRG+FG V    ++  + +    A+K L++  + +  E   F+ E  V+     K +  
Sbjct: 82  IGRGAFGEV---AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L     +  N  LV ++   G L + L  F +  P    R    F +A  ++ +      
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR----FYLAEMVIAIDSVHQL 194
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFR--- 697
             +H DIKP NIL+D   + R++DFG    L L +   +++++  GT  Y++PE  +   
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 698 --NSTITAKVDVYSFGVLLLEII 718
                   + D +S GV + E++
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEML 275

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E VG+G +G V++G       +    + +     F+  E E  N V++     H+N+   
Sbjct: 43  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 93
Query: 585 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 636
           LGF               L+  +   G+L  +L    L     LR  I   IA GL +LH
Sbjct: 94  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 151
Query: 637 EDC-----SAQIIHCDIKPQNILLDDYYNARISDFGLAKL--LTLNQSKAIRTAIRGTKG 689
            +         I H D+K +NIL+       I+D GLA +   + NQ         GTK 
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 690 YVAPEWFRNSTITA-------KVDVYSFGVLLLEI 717
           Y+APE   + TI         +VD+++FG++L E+
Sbjct: 212 YMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEV 245

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E VG+G +G V++G       +    + +     F+  E E  N V++     H+N+   
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 585 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 636
           LGF               L+  +   G+L  +L    L     LR  I   IA GL +LH
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 637 EDC-----SAQIIHCDIKPQNILLDDYYNARISDFGLAKL--LTLNQSKAIRTAIRGTKG 689
            +         I H D+K +NIL+       I+D GLA +   + NQ         GTK 
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 690 YVAPEWFRNSTITA-------KVDVYSFGVLLLEI 717
           Y+APE   + TI         +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E VG+G +G V++G       +    + +     F+  E E  N V++     H+N+   
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 585 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 636
           LGF               L+  +   G+L  +L    L     LR  I   IA GL +LH
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 637 EDC-----SAQIIHCDIKPQNILLDDYYNARISDFGLAKL--LTLNQSKAIRTAIRGTKG 689
            +         I H D+K +NIL+       I+D GLA +   + NQ         GTK 
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 690 YVAPEWFRNSTITA-------KVDVYSFGVLLLEI 717
           Y+APE   + TI         +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 36/172 (20%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKN 580
           ++G+G+FG V+K      R +   VA+KK   V  + EKE        E+ ++    H+N
Sbjct: 24  KIGQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHEN 77
Query: 581 LVRLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIA 625
           +V L+  C       NR      LV++F       L +  L  F    +K    +  N  
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 135
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
                GL Y+H +   +I+H D+K  N+L+      +++DFGLA+  +L ++
Sbjct: 136 -----GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 36/172 (20%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKN 580
           ++G+G+FG V+K      R +   VA+KK   V  + EKE        E+ ++    H+N
Sbjct: 25  KIGQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHEN 78
Query: 581 LVRLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIA 625
           +V L+  C       NR      LV++F       L +  L  F    +K    +  N  
Sbjct: 79  VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 136
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
                GL Y+H +   +I+H D+K  N+L+      +++DFGLA+  +L ++
Sbjct: 137 -----GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 36/172 (20%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKN 580
           ++G+G+FG V+K      R +   VA+KK   V  + EKE        E+ ++    H+N
Sbjct: 25  KIGQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHEN 78
Query: 581 LVRLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIA 625
           +V L+  C       NR      LV++F       L +  L  F    +K    +  N  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 136
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
                GL Y+H +   +I+H D+K  N+L+      +++DFGLA+  +L ++
Sbjct: 137 -----GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 36/172 (20%)
Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHKN 580
           ++G+G+FG V+K      R +   VA+KK   V  + EKE        E+ ++    H+N
Sbjct: 25  KIGQGTFGEVFKA---RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHEN 78
Query: 581 LVRLLGFCDEGQ---NR-----LLVYEF-------LNNGTLASFLFGNLKPSWNLRTNIA 625
           +V L+  C       NR      LV++F       L +  L  F    +K    +  N  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN-- 136
Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
                GL Y+H +   +I+H D+K  N+L+      +++DFGLA+  +L ++
Sbjct: 137 -----GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGE--KEFKNEVVVIGQTHHKNLV 582
           +G G++G V+    ++   +    A+K L +  + Q  +  +  + E  V+        +
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
             L +  + + +L L+ +++N G L + L    + + +       +I   L +LH+    
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---L 178
Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR--NS 699
            II+ DIK +NILLD   +  ++DFGL+K    ++++       GT  Y+AP+  R  +S
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDS 237
Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIE 727
                VD +S GVL+ E+++    F ++
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTVD 265

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 514 KELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKN 568
           KE++   ++F+  + +GRG+FG V    ++  + +    A+K L++  + +  E   F+ 
Sbjct: 83  KEMQLHREDFEIIKVIGRGAFGEV---AVVKMKNTERIYAMKILNKWEMLKRAETACFRE 139
Query: 569 E--VVVIGQTHHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTN 623
           E  V+V G       +  L +  + +N L LV ++   G L + L  F +  P    R  
Sbjct: 140 ERDVLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR-- 194
Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
             F I   +L +        +H DIKP N+LLD   + R++DFG    L +N    ++++
Sbjct: 195 --FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSS 250
Query: 684 IR-GTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSF 724
           +  GT  Y++PE  +           + D +S GV + E++     F
Sbjct: 251 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 514 KELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKN 568
           KE++   ++F+  + +GRG+FG V    ++  + +    A+K L++  + +  E   F+ 
Sbjct: 67  KEMQLHREDFEIIKVIGRGAFGEV---AVVKMKNTERIYAMKILNKWEMLKRAETACFRE 123
Query: 569 E--VVVIGQTHHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTN 623
           E  V+V G       +  L +  + +N L LV ++   G L + L  F +  P    R  
Sbjct: 124 ERDVLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR-- 178
Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
             F I   +L +        +H DIKP N+LLD   + R++DFG    L +N    ++++
Sbjct: 179 --FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSS 234
Query: 684 IR-GTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSF 724
           +  GT  Y++PE  +           + D +S GV + E++     F
Sbjct: 235 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 577 HHKNLVRLLGFCDEGQNRLL--VYEFLN---NGTLASFLFGNLKPSWNLRTNIAFQIARG 631
           HHK+++      +  QN+ L  + E++    +  L SF+        NL +   +Q+ R 
Sbjct: 99  HHKSVI-----VNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153
Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNA-RISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           + ++H   S  I H DIKPQN+L++   N  ++ DFG AK L  ++      A   ++ Y
Sbjct: 154 VGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV---AXICSRFY 207
Query: 691 VAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIE 727
            APE    +T  T  +D++S G +  E+I  +  F  E
Sbjct: 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           LV+E +NN      L+  L   +++R  + ++I + L Y H   S  I+H D+KP N+L+
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVLI 164
Query: 656 D-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVL 713
           D ++   R+ D+GLA+     Q   +R A R  KG   PE   +  +    +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 714 LLEIISCRKSF 724
           L  +I  ++ F
Sbjct: 222 LASMIFRKEPF 232

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E VG+G +G V++G+      +    + +     F+  E E  N V++     H N+   
Sbjct: 14  ECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR--ETEIYNTVLL----RHDNI--- 64
Query: 585 LGFC-------DEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLH 636
           LGF        +      L+  +  +G+L  FL    L+P   LR  +A   A GL +LH
Sbjct: 65  LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLH 122
Query: 637 EDC-----SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT-----LNQSKAIRTAIRG 686
            +         I H D K +N+L+       I+D GLA + +     L+     R    G
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV---G 179
Query: 687 TKGYVAPEWFRNSTIT------AKVDVYSFGVLLLEI 717
           TK Y+APE       T         D+++FG++L EI
Sbjct: 180 TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           LV+E +NN      L+  L   +++R  + ++I + L Y H   S  I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 656 D-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVL 713
           D ++   R+ D+GLA+     Q   +R A R  KG   PE   +  +    +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 714 LLEIISCRKSF 724
           L  +I  ++ F
Sbjct: 222 LASMIFRKEPF 232

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           LV+E +NN      L+  L   +++R  + ++I + L Y H   S  I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 656 D-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVL 713
           D ++   R+ D+GLA+     Q   +R A R  KG   PE   +  +    +D++S G +
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 220
Query: 714 LLEIISCRKSF 724
           L  +I  ++ F
Sbjct: 221 LASMIFRKEPF 231

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           LV+E +NN      L+  L   +++R  + ++I + L Y H   S  I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 656 D-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVL 713
           D ++   R+ D+GLA+     Q   +R A R  KG   PE   +  +    +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 714 LLEIISCRKSF 724
           L  +I  ++ F
Sbjct: 222 LASMIFRKEPF 232
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	813
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-125
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-114
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-113
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-74
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-64
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-62
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-60
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-59
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-59
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-57
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-56
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-56
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-55
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-55
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-50
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-50
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-49
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-49
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-43
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-42
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-41
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-40
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-40
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-40
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-40
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-39
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-39
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-39
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-39
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-39
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-38
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-38
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-38
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-38
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-38
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-38
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-38
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-38
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-37
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-37
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-37
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-37
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-37
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-37
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-37
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-37
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-37
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-37
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-37
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-37
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-37
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-37
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-36
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-36
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-36
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-36
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-36
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-36
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-36
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-36
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-36
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-36
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	5e-36
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-36
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-36
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-36
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-35
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-35
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-35
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-35
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-35
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-35
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-35
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-34
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-34
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-34
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-34
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-34
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-34
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-34
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-33
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-33
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-33
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-32
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-32
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-32
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-31
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-31
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-30
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-30
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-29
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-29
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-29
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-29
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-29
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-29
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-29
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-29
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-28
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-28
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-28
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-28
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-28
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-28
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-28
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	8e-28
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-27
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-27
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-27
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-27
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-27
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-27
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-27
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-27
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-27
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	9e-27
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-26
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-26
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-26
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-26
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-26
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-26
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-26
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-26
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-26
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-26
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-26
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-25
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-25
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-25
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-25
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-25
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-25
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-25
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-24
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-24
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-24
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-23
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-22
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-22
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-22
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-22
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-22
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-21
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-21
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-21
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-21
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-21
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-21
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-21
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-21
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	8e-21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-20
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-19
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-19
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-19
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-19
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-19
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-19
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-19
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-19
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	7e-19
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-18
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-18
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-18
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-18
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-18
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-18
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	6e-18
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-18
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-17
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-17
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-17
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-17
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-16
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-16
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-16
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-16
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-16
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-16
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-16
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-16
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-16
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-16
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-16
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-16
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-15
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-15
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-13
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-13
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-13
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-11
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	5e-11
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	3e-05
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	8e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	6e-11
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	9e-11
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-10
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-10
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-10
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	5e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-10
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-09
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-07
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	1e-05
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	2e-05
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	2e-04
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	4e-05
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	4e-05
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	7e-05
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	6e-05
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	2e-04
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-04
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	3e-04
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	4e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  377 bits (970), Expect = e-125
 Identities = 122/298 (40%), Positives = 179/298 (60%), Gaps = 14/298 (4%)

Query: 507 NLPCFSYKELEEATDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGE 563
            L  FS +EL+ A+DNF  +  +GRG FG VYKG +       T VAVK+L     Q GE
Sbjct: 16  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----ADGTLVAVKRLKEERTQGGE 71

Query: 564 KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS----WN 619
            +F+ EV +I    H+NL+RL GFC     RLLVY ++ NG++AS L    +      W 
Sbjct: 72  LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
            R  IA   ARGL YLH+ C  +IIH D+K  NILLD+ + A + DFGLAKL+    +  
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH- 190

Query: 680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDI--EMGEEYAILTD 737
           + TA+RGT G++APE+      + K DV+ +GV+LLE+I+ +++FD+     ++  +L D
Sbjct: 191 VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250

Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG 795
           W     + +KL+ LV+ D++     + VE+L+ V++ C Q  P  RP M +V++MLEG
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  348 bits (894), Expect = e-114
 Identities = 114/309 (36%), Positives = 165/309 (53%), Gaps = 28/309 (9%)

Query: 505 ETNLPCFSYKELEEATDNFKEE--------VGRGSFGIVYKGVILTTRTSTTAVAVKKLD 556
           +T    FS+ EL+  T+NF E         +G G FG+VYKG +     + T VAVKKL 
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLA 63

Query: 557 RVFQD----GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG 612
            +        +++F  E+ V+ +  H+NLV LLGF  +G +  LVY ++ NG+L   L  
Sbjct: 64  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123

Query: 613 --NLKP-SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
                P SW++R  IA   A G+ +LHE+     IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLA 180

Query: 670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG 729
           +         + + I GT  Y+APE  R   IT K D+YSFGV+LLEII+   + D    
Sbjct: 181 RASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHRE 239

Query: 730 EEYAILTDWAFDCYRNEK-LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK 788
            +   L D   +    EK ++D ++  M    D   VE +  V+  C+ E  + RP +KK
Sbjct: 240 PQL--LLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKK 296

Query: 789 VLQMLEGVV 797
           V Q+L+ + 
Sbjct: 297 VQQLLQEMT 305

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  347 bits (893), Expect = e-113
 Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 13/308 (4%)

Query: 498 SPGDGTIETNLPCFSYKELEEATDNFKEE--VGRGSFGIVYKGVILTTRTSTTAVAVKKL 555
                 +          +LEEAT+NF  +  +G G FG VYKGV+         VA+K+ 
Sbjct: 16  LSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL----RDGAKVALKRR 71

Query: 556 DRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK 615
                 G +EF+ E+  +    H +LV L+GFCDE    +L+Y+++ NG L   L+G+  
Sbjct: 72  TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131

Query: 616 P----SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
           P    SW  R  I    ARGL YLH      IIH D+K  NILLD+ +  +I+DFG++K 
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK 188

Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
            T      + T ++GT GY+ PE+F    +T K DVYSFGV+L E++  R +    +  E
Sbjct: 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248

Query: 732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              L +WA + + N +L+ +V+ ++      + + K    ++ C+      RP+M  VL 
Sbjct: 249 MVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308

Query: 792 MLEGVVEV 799
            LE  + +
Sbjct: 309 KLEYALRL 316

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  243 bits (623), Expect = 3e-74
 Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 33/309 (10%)

Query: 511 FSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFK 567
              + L   +   +  E   RG FG V+K  +         VAVK      QD    + +
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-----LNEYVAVKIFPI--QDKQSWQNE 66

Query: 568 NEVVVIGQTHHKNLVRLLGFCDEGQN----RLLVYEFLNNGTLASFLFGNLKPSWNLRTN 623
            EV  +    H+N+++ +G    G +      L+  F   G+L+ FL  N   SWN   +
Sbjct: 67  YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCH 125

Query: 624 IAFQIARGLLYLHEDCSAQ-------IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
           IA  +ARGL YLHED           I H DIK +N+LL +   A I+DFGLA      +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185

Query: 677 SKAIRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           S        GT+ Y+APE    +         ++D+Y+ G++L E+ S   + D  + E 
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245

Query: 732 YAILTDWAFDCYRNEKLDDLVEGDM------EALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
                +        E + ++V          +       +  L      C   D   R +
Sbjct: 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305

Query: 786 MKKVLQMLE 794
              V + + 
Sbjct: 306 AGCVGERIT 314

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  215 bits (550), Expect = 7e-64
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 47/303 (15%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEV 570
           + +L       KE++G GSFG V++          + VAVK L       +   EF  EV
Sbjct: 36  WCDLN-----IKEKIGAGSFGTVHRA-----EWHGSDVAVKILMEQDFHAERVNEFLREV 85

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQ 627
            ++ +  H N+V  +G   +  N  +V E+L+ G+L   L  +    +     R ++A+ 
Sbjct: 86  AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           +A+G+ YLH   +  I+H ++K  N+L+D  Y  ++ DFGL++L     +     +  GT
Sbjct: 146 VAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGT 202

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR--- 744
             ++APE  R+     K DVYSFGV+L E+ + ++ +   +     ++    F C R   
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG-NL-NPAQVVAAVGFKCKRLEI 260

Query: 745 ----NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
               N ++  ++E                     C   +P  RP+   ++ +L  +++ +
Sbjct: 261 PRNLNPQVAAIIE--------------------GCWTNEPWKRPSFATIMDLLRPLIKSA 300

Query: 801 LPP 803
           +PP
Sbjct: 301 VPP 303

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  212 bits (541), Expect = 1e-62
 Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 40/307 (13%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 572
           YKE+E      +E VGRG+FG+V K      +     VA+K+++   +   K F  E+  
Sbjct: 7   YKEIE-----VEEVVGRGAFGVVCKA-----KWRAKDVAIKQIES--ESERKAFIVELRQ 54

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIA 629
           + + +H N+V+L G C       LV E+   G+L + L G       +     +   Q +
Sbjct: 55  LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
           +G+ YLH      +IH D+KP N+LL       +I DFG A  +     +   T  +G+ 
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSA 167

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            ++APE F  S  + K DV+S+G++L E+I+ RK FD E+G     +     +  R   +
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGTRPPLI 226

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV---SLPPNP 805
            +               + +  +   C  +DPS RP+M+++++++  ++     +  P  
Sbjct: 227 KN-------------LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ 273

Query: 806 YPFSSSM 812
           YP   S+
Sbjct: 274 YPCQHSL 280

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  205 bits (524), Expect = 3e-60
 Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 38/309 (12%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           +    +     E +G+G FG   K    T R +   + +K+L R  ++ ++ F  EV V+
Sbjct: 5   RIFRPSDLIHGEVLGKGCFGQAIKV---THRETGEVMVMKELIRFDEETQRTFLKEVKVM 61

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGL 632
               H N+++ +G   + +    + E++  GTL   +        W+ R + A  IA G+
Sbjct: 62  RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGM 121

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS------------KAI 680
            YLH   S  IIH D+   N L+ +  N  ++DFGLA+L+   ++            +  
Sbjct: 122 AYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWA 739
           R  + G   ++APE     +   KVDV+SFG++L EII    +  D         L    
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238

Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV--- 796
           F                    +  C      +++ C   DP  RP+  K+   LE +   
Sbjct: 239 F--LD-----------RYCPPN--CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283

Query: 797 VEVSLPPNP 805
           +   LP  P
Sbjct: 284 LAGHLPLGP 292

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  202 bits (516), Expect = 1e-59
 Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 42/294 (14%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL----DRVFQDGEKEFKN 568
           + EL       +E +G G FG VY+            VAVK      D       +  + 
Sbjct: 6   FAELT-----LEEIIGIGGFGKVYRA-----FWIGDEVAVKAARHDPDEDISQTIENVRQ 55

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
           E  +     H N++ L G C +  N  LV EF   G L   L G  +   ++  N A QI
Sbjct: 56  EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQI 114

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR--------ISDFGLAKLLTLNQSKAI 680
           ARG+ YLH++    IIH D+K  NIL+               I+DFGLA+       +  
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE----WHRTT 170

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 740
           + +  G   ++APE  R S  +   DV+S+GVLL E+++    F   + +  A+    A 
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR-GI-DGLAVAYGVAM 228

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           +                      C E    +   C   DP  RP+   +L  L 
Sbjct: 229 NKLALPIPST-------------CPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  203 bits (517), Expect = 6e-59
 Identities = 80/338 (23%), Positives = 126/338 (37%), Gaps = 47/338 (13%)

Query: 511 FSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
            +  E     DN K  E +GRG +G VYKG +         VAVK          + F N
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFS---FANRQNFIN 54

Query: 569 EVVV--IGQTHHKNLVRLLGFCDEG-----QNRLLVYEFLNNGTLASFLFGNLKPSWNLR 621
           E  +  +    H N+ R +   +          LLV E+  NG+L  +L  +    W   
Sbjct: 55  EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSS 113

Query: 622 TNIAFQIARGLLYLHEDCSA------QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
             +A  + RGL YLH +          I H D+  +N+L+ +     ISDFGL+  LT N
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173

Query: 676 QSKAIR------TAIRGTKGYVAPEWFRNS-------TITAKVDVYSFGVLLLEIIS-CR 721
           +            +  GT  Y+APE    +       +   +VD+Y+ G++  EI   C 
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233

Query: 722 KSFDIEMGEEYAI-LTDWAFDCYRNEKLDDLVEGD-------MEALNDIKCVEKLVMVSI 773
             F  E   EY +       +    E +  LV  +            +   V  L     
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293

Query: 774 WCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPFSSS 811
            C  +D   R T +   + +  ++      N     ++
Sbjct: 294 DCWDQDAEARLTAQXAEERMAELMM-IWERNKSVSPTA 330

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  196 bits (500), Expect = 4e-57
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 44/297 (14%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-------KE 565
             E+E     +++++G+G FG+V+KG ++  ++    VA+K L     +GE       +E
Sbjct: 18  DNEIE-----YEKQIGKGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQE 69

Query: 566 FKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNI 624
           F+ EV ++   +H N+V+L G         +V EF+  G L   L     P  W+++  +
Sbjct: 70  FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-----YNARISDFGLAKLLTLNQSKA 679
              IA G+ Y+  + +  I+H D++  NI L          A+++DFGL++    +    
Sbjct: 128 MLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV--- 183

Query: 680 IRTAIRGTKGYVAPEWF--RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
             + + G   ++APE       + T K D YSF ++L  I++    FD     +   +  
Sbjct: 184 --SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241

Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
              +  R    +D             C  +L  V   C   DP  RP    +++ L 
Sbjct: 242 IREEGLRPTIPED-------------CPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  196 bits (500), Expect = 1e-56
 Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 45/297 (15%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEV 570
           +++LE       E +G+G FG VY G           VA++ +  +R  +D  K FK EV
Sbjct: 32  FEQLE-----IGELIGKGRFGQVYHGRWHGE------VAIRLIDIERDNEDQLKAFKREV 80

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIA 629
           +   QT H+N+V  +G C    +  ++       TL S +    +    N    IA +I 
Sbjct: 81  MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIV 140

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR---TAIRG 686
           +G+ YLH   +  I+H D+K +N+  D+     I+DFGL  +  + Q+           G
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNG 196

Query: 687 TKGYVAPEWFRNSTI---------TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
              ++APE  R  +          +   DV++ G +  E+ +    F      E  I   
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAII--- 252

Query: 738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
             +      K +         L+ I   +++  + ++C   +   RPT  K++ MLE
Sbjct: 253 --WQMGTGMKPN---------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  194 bits (496), Expect = 2e-56
 Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 27/278 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQTHHKN 580
             + +G GSFG VYKG           VAVK L          + FKNEV V+ +T H N
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           ++  +G+        +V ++    +L   L     K       +IA Q ARG+ YLH   
Sbjct: 82  ILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH--- 137

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           +  IIH D+K  NI L +    +I DFGLA   +          + G+  ++APE  R  
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197

Query: 700 TI---TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
                + + DVY+FG++L E+++ +  +   +     I+         +  L  +     
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIEMVGRG-SLSPDLSKVRSN-- 253

Query: 757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                  C +++  +   C+++    RP+  ++L  +E
Sbjct: 254 -------CPKRMKRLMAECLKKKRDERPSFPRILAEIE 284

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  190 bits (484), Expect = 5e-55
 Identities = 59/298 (19%), Positives = 109/298 (36%), Gaps = 56/298 (18%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEV 570
           +K+L      F  ++     G ++KG     R     + VK L          ++F  E 
Sbjct: 9   FKQLN-----FLTKLNENHSGELWKG-----RWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58

Query: 571 VVIGQTHHKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAF 626
             +    H N++ +LG C      +  L+  ++  G+L + L    N     +     A 
Sbjct: 59  PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            +ARG+ +LH      I    +  +++++D+   ARIS   +                  
Sbjct: 119 DMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-------SPGRMY 170

Query: 687 TKGYVAPEWFRNS---TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
              +VAPE  +     T     D++SF VLL E+++    F  ++     I    A +  
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA-DL-SNMEIGMKVALEGL 228

Query: 744 R-------NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           R       +  +  L++                     C+ EDP+ RP    ++ +LE
Sbjct: 229 RPTIPPGISPHVSKLMK--------------------ICMNEDPAKRPKFDMIVPILE 266

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  178 bits (453), Expect = 2e-50
 Identities = 69/305 (22%), Positives = 114/305 (37%), Gaps = 51/305 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV--IGQTHHKN 580
             E VG+G +G V++G           VAVK      +D EK +  E  +       H+N
Sbjct: 12  LLECVGKGRYGEVWRG-----SWQGENVAVKIFSS--RD-EKSWFRETELYNTVMLRHEN 63

Query: 581 LVRLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           ++  +      ++      L+  +   G+L  +L             I   IA GL +LH
Sbjct: 64  ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLH 122

Query: 637 EDCSAQ-----IIHCDIKPQNILLDDYYNARISDFGLAKLL--TLNQSKAIRTAIRGTKG 689
            +         I H D+K +NIL+       I+D GLA +   + NQ         GTK 
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182

Query: 690 YVAPEWFRNSTITA------KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
           Y+APE    +          +VD+++FG++L E+     S  I   E+Y          +
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV--EDYKP-------PF 233

Query: 744 RNEKLDDLVEGDM--------------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            +   +D    DM                      +  L  +   C  ++PS R T  ++
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293

Query: 790 LQMLE 794
            + L 
Sbjct: 294 KKTLT 298

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  176 bits (447), Expect = 4e-49
 Identities = 61/305 (20%), Positives = 110/305 (36%), Gaps = 51/305 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNE--VVVIGQTHHKN 580
            +E +G+G FG V++G     +     VAVK         E+ +  E  +       H+N
Sbjct: 46  LQESIGKGRFGEVWRG-----KWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 97

Query: 581 LVRLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           ++  +   ++         LV ++  +G+L  +L      +      +A   A GL +LH
Sbjct: 98  ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLH 156

Query: 637 EDCSAQ-----IIHCDIKPQNILLDDYYNARISDFGLAKLL--TLNQSKAIRTAIRGTKG 689
            +         I H D+K +NIL+       I+D GLA       +          GTK 
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216

Query: 690 YVAPEWFRNSTITA------KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
           Y+APE   +S          + D+Y+ G++  EI        I   E+Y +        Y
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH--EDYQL-------PY 267

Query: 744 RNEKLDDLVEGDM--------------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            +    D    +M                    + +  +  +   C   + + R T  ++
Sbjct: 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327

Query: 790 LQMLE 794
            + L 
Sbjct: 328 KKTLS 332

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  175 bits (446), Expect = 4e-49
 Identities = 66/305 (21%), Positives = 115/305 (37%), Gaps = 51/305 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV--IGQTHHKN 580
             +++G+G +G V+ G     +     VAVK       + E  +  E  +       H+N
Sbjct: 41  MVKQIGKGRYGEVWMG-----KWRGEKVAVKVFFT--TE-EASWFRETEIYQTVLMRHEN 92

Query: 581 LVRLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           ++  +    +G        L+ ++  NG+L  +L  +          +A+    GL +LH
Sbjct: 93  ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLH 151

Query: 637 EDCSAQ-----IIHCDIKPQNILLDDYYNARISDFGLAKLL--TLNQSKAIRTAIRGTKG 689
            +  +      I H D+K +NIL+       I+D GLA       N+         GTK 
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211

Query: 690 YVAPE------WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 743
           Y+ PE         +       D+YSFG++L E+     S  I   EEY +        Y
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI--VEEYQL-------PY 262

Query: 744 RNEKLDDLVEGDM--------------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
            +    D    DM                 +  +C+ ++  +   C   +P+ R T  +V
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322

Query: 790 LQMLE 794
            + L 
Sbjct: 323 KKTLA 327

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  159 bits (404), Expect = 6e-43
 Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 41/287 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNL 581
             E++GRG+FG V+ G +   R   T VAVK   + +  D + +F  E  ++ Q  H N+
Sbjct: 118 LGEQIGRGNFGEVFSGRL---RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCS 640
           VRL+G C + Q   +V E +  G   +FL     +        +    A G+ YL    S
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---S 231

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA----IRGTKGYVAPEWF 696
              IH D+  +N L+ +    +ISDFG+++        A        ++ T    APE  
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT----APEAL 287

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD 755
                +++ DV+SFG+LL E  S         G   Y  L+        N++  + VE  
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSL--------GASPYPNLS--------NQQTREFVEKG 331

Query: 756 --MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             +       C + +  +M   W    +P  RP+   + Q L+ + +
Sbjct: 332 GRLPCPEL--CPDAVFRLMEQCW--AYEPGQRPSFSTIYQELQSIRK 374

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  154 bits (392), Expect = 9e-42
 Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 29/296 (9%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV 572
              EE    +  ++G+G+FG V           +   VAVK+L     D +++F+ E+ +
Sbjct: 18  TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77

Query: 573 IGQTHHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQI 628
           +   H   +V+  G       Q+  LV E+L +G L  FL  + +   +       + QI
Sbjct: 78  LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQI 136

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA----- 683
            +G+ YL    S + +H D+  +NIL++   + +I+DFGLAKLL L++   +        
Sbjct: 137 CKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDC 742
           I       APE   ++  + + DV+SFGV+L E+ + C KS       E+  +     D 
Sbjct: 194 IFWY----APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC--SPSAEFLRMMGCERDV 247

Query: 743 YRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
               +L +L+E    + A     C  ++  +M   W     P  RP+   +   L+
Sbjct: 248 PALSRLLELLEEGQRLPAPPA--CPAEVHELMKLCW--APSPQDRPSFSALGPQLD 299

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  152 bits (386), Expect = 5e-41
 Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 22/312 (7%)

Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVK 553
             N    G + +        + EE    F +++G+G+FG V           +   VAVK
Sbjct: 17  TENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK 76

Query: 554 KLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLF 611
           KL    ++  ++F+ E+ ++    H N+V+  G C     +N  L+ E+L  G+L  +L 
Sbjct: 77  KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136

Query: 612 GNLKPSWNLRT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
            + K   +         QI +G+ YL    + + IH D+  +NIL+++    +I DFGL 
Sbjct: 137 KH-KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 192

Query: 670 KLLTLNQSKAIRTAIRGTKGYV---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDI 726
           K+L  ++           +  +   APE    S  +   DV+SFGV+L E+ +  +    
Sbjct: 193 KVLPQDKEYY--KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250

Query: 727 EMGEEYAILTDWAFDCYRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSL 782
              E   ++ +          L +L++ +  +   +   C +++  +M   W    + + 
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG--CPDEIYMIMTECW--NNNVNQ 306

Query: 783 RPTMKKVLQMLE 794
           RP+ + +   ++
Sbjct: 307 RPSFRDLALRVD 318

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  150 bits (380), Expect = 1e-40
 Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 22/292 (7%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI 573
           + EE    F +++G+G+FG V           +   VAVKKL    ++  ++F+ E+ ++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65

Query: 574 GQTHHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIA 629
               H N+V+  G C     +N  L+ E+L  G+L  +L  + K   +         QI 
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQIC 124

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +G+ YL    + + IH D+  +NIL+++    +I DFGL K+L  ++           + 
Sbjct: 125 KGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF--KVKEPGES 179

Query: 690 YV---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE 746
            +   APE    S  +   DV+SFGV+L E+ +  +       E   ++ +         
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239

Query: 747 KLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            L +L++ +  +   +   C +++  +M   W    + + RP+ + +   ++
Sbjct: 240 HLIELLKNNGRLPRPDG--CPDEIYMIMTECW--NNNVNQRPSFRDLALRVD 287

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  149 bits (378), Expect = 2e-40
 Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 42/282 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKN 580
           F  E+GRGSF  VYKG+   T   T  VA    +  ++ +   + FK E  ++    H N
Sbjct: 30  FDIEIGRGSFKTVYKGLDTET---TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 86

Query: 581 LVRLLGFC---DEGQNRLLVY-EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           +VR         +G+  +++  E + +GTL ++L         +  +   QI +GL +LH
Sbjct: 87  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 146

Query: 637 EDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              +  IIH D+K  NI +     + +I D GLA L   + +K    A+ GT  ++APE 
Sbjct: 147 T-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPEFMAPEM 201

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF-DIE-MGEEYAILTD----WAFDCYRNEKLD 749
           +        VDVY+FG+ +LE+ +    + + +   + Y  +T      +FD     ++ 
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 260

Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +++E                     CI+++   R ++K +L 
Sbjct: 261 EIIE--------------------GCIRQNKDERYSIKDLLN 282

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  154 bits (390), Expect = 3e-40
 Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            K ++G G +G VY+GV    +  +  VAVK L +      +EF  E  V+ +  H NLV
Sbjct: 224 MKHKLGGGQYGEVYEGVW---KKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 279

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +LLG C       ++ EF+  G L  +L    +   +      +A QI+  + YL     
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---K 336

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWFR 697
              IH ++  +N L+ + +  +++DFGL++L+T +        +  I+ T    APE   
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLA 392

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD-- 755
            +  + K DV++FGVLL EI +   S        Y  +           ++ +L+E D  
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMS-------PYPGID--------LSQVYELLEKDYR 437

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           ME      C EK+  +   C Q +PS RP+  ++ Q  E
Sbjct: 438 MERPEG--CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  148 bits (376), Expect = 5e-40
 Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)

Query: 515 ELEEATDNFKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVV 572
             E+       ++G G FG V           +   VAVK L      +   + K E+ +
Sbjct: 17  HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76

Query: 573 IGQTHHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQI 628
           +   +H+N+V+  G C  D G    L+ EFL +G+L  +L  N K   NL+     A QI
Sbjct: 77  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQI 135

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            +G+ YL    S Q +H D+  +N+L++  +  +I DFGL K +  ++     T      
Sbjct: 136 CKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY--TVKDDRD 190

Query: 689 GYV---APEWFRNSTITAKVDVYSFGVLLLEIIS-------CRKSFDIEMGEEYAILTDW 738
             V   APE    S      DV+SFGV L E+++           F   +G  +  +T  
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT-- 248

Query: 739 AFDCYRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
                   +L + ++    +    +  C +++  +M   W  +  PS R + + +++  E
Sbjct: 249 ------VTRLVNTLKEGKRLPCPPN--CPDEVYQLMRKCW--EFQPSNRTSFQNLIEGFE 298

Query: 795 GVVE 798
            +++
Sbjct: 299 ALLK 302

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  149 bits (378), Expect = 2e-39
 Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 43/303 (14%)

Query: 513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVV 571
                    +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +
Sbjct: 83  VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 142

Query: 572 VIGQTHHKNLVRLLGFCDEGQN-RLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQI 628
           ++    H N++ LLG C   +   L+V  ++ +G L +F+      +  ++       Q+
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQV 201

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA----- 683
           A+G+ +L    S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++        
Sbjct: 202 AKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258

Query: 684 -IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFD 741
            ++      A E  +    T K DV+SFGVLL E+++         G   Y  +      
Sbjct: 259 PVKWM----ALESLQTQKFTTKSDVWSFGVLLWELMT--------RGAPPYPDVN----- 301

Query: 742 CYRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVV 797
                 +   +     +       C + L  VM+  W       +RP+  +++  +  + 
Sbjct: 302 ---TFDITVYLLQGRRLLQPEY--CPDPLYEVMLKCW--HPKAEMRPSFSELVSRISAIF 354

Query: 798 EVS 800
              
Sbjct: 355 STF 357

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  146 bits (370), Expect = 3e-39
 Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 43/300 (14%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
                   +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E ++
Sbjct: 20  IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79

Query: 573 IGQTHHKNLVRLLGFCDEGQN-RLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIA 629
           +    H N++ LLG C   +   L+V  ++ +G L +F+      +  ++       Q+A
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVA 138

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL------TLNQSKAIRTA 683
           +G+ YL    S + +H D+  +N +LD+ +  +++DFGLA+ +      +++     +  
Sbjct: 139 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDC 742
           ++      A E  +    T K DV+SFGVLL E+++         G   Y  +       
Sbjct: 196 VKWM----ALESLQTQKFTTKSDVWSFGVLLWELMT--------RGAPPYPDVN------ 237

Query: 743 YRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                +   +     +       C + L  VM+  W       +RP+  +++  +  +  
Sbjct: 238 --TFDITVYLLQGRRLLQPEY--CPDPLYEVMLKCW--HPKAEMRPSFSELVSRISAIFS 291

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  146 bits (370), Expect = 5e-39
 Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 30/281 (10%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQ 575
            NF+  +++GRG F  VY+   L        VA+KK+        K       E+ ++ Q
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGV---PVALKKVQIFDLMDAKARADCIKEIDLLKQ 88

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARG 631
            +H N+++      E     +V E  + G L+  +    K    +          Q+   
Sbjct: 89  LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L ++H     +++H DIKP N+ +      ++ D GL +  +   + A  + + GT  Y+
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA-HSLV-GTPYYM 203

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           +PE    +    K D++S G LL E+ + +  F  +    Y++                +
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-------------KI 250

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
            + D   L      E+L  +   CI  DP  RP +  V  +
Sbjct: 251 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  146 bits (370), Expect = 5e-39
 Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 25/311 (8%)

Query: 496 RNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVI-LTTRTSTTAVAVKK 554
            +  G   +    P        +       ++G G FG V       T   +   VAVK 
Sbjct: 9   HHHHGALEVLFQGPGDP-TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA 67

Query: 555 LDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLLGFC--DEGQNRLLVYEFLNNGTLASFLF 611
           L           +K E+ ++   +H+++++  G C      +  LV E++  G+L  +L 
Sbjct: 68  LKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP 127

Query: 612 GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
            +           A QI  G+ YLH   +   IH D+  +N+LLD+    +I DFGLAK 
Sbjct: 128 RH-SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183

Query: 672 LTLNQSKAIRTAIRGTKGYV---APEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIE 727
           +                  V   APE  +        DV+SFGV L E+++ C  S    
Sbjct: 184 VPEGHE--YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 241

Query: 728 MGEEYAILTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLR 783
                 I            +L +L+E    +   +   C  ++  +M + W  + + S R
Sbjct: 242 TKFLELIGIA--QGQMTVLRLTELLERGERLPRPDK--CPAEVYHLMKNCW--ETEASFR 295

Query: 784 PTMKKVLQMLE 794
           PT + ++ +L+
Sbjct: 296 PTFENLIPILK 306

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  146 bits (371), Expect = 6e-39
 Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 42/285 (14%)

Query: 523 FKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKN 580
             + +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 638
           + RLLG C       L+ + +  G L  ++  + K +   +   N   QIA+G+ YL + 
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLED- 135

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA----IRGTKGYVAPE 694
              +++H D+  +N+L+    + +I+DFGLAKLL   + +         I+      A E
Sbjct: 136 --RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM----ALE 189

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE 753
              +   T + DV+S+GV + E+++         G + Y  +           ++  ++E
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT--------FGSKPYDGIP--------ASEISSILE 233

Query: 754 GD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
               +       C   +  +M   W    D   RP  ++++    
Sbjct: 234 KGERLPQPPI--CTIDVYMIMRKCW--MIDADSRPKFRELIIEFS 274

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  145 bits (369), Expect = 1e-38
 Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 37/292 (12%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           +E+E +  + ++ +G G  G V  G +         VA+K L   + + ++ +F +E  +
Sbjct: 44  REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIAR 630
           +GQ  H N++RL G    G+  ++V E++ NG+L +FL  +    + +     +   +  
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGA 162

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           G+ YL        +H D+  +N+L+D     ++SDFGL+++L  +   A  T   G K  
Sbjct: 163 GMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT--TGGKIP 217

Query: 691 V---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNE 746
           +   APE     T ++  DV+SFGV++ E+++         GE  Y  +T        N 
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY--------GERPYWNMT--------NR 261

Query: 747 KLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            +   VE    + A     C   L  +M+  W   +D + RP   +++ +L+
Sbjct: 262 DVISSVEEGYRLPAPMG--CPHALHQLMLDCW--HKDRAQRPRFSQIVSVLD 309

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  145 bits (367), Expect = 1e-38
 Identities = 61/300 (20%), Positives = 119/300 (39%), Gaps = 54/300 (18%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVFQDGEKE-FKNEVVVIGQT 576
            +F+  + +GRG FG+V++              A+K++    ++  +E    EV  + + 
Sbjct: 5   TDFEPIQCLGRGGFGVVFEA----KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 60

Query: 577 HHKNLVRLLG-FCDEG--------QNRLLVY---EFLNNGTLASFLF---GNLKPSWNLR 621
            H  +VR    + ++           ++ +Y   +      L  ++       +   ++ 
Sbjct: 61  EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120

Query: 622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-- 679
            +I  QIA  + +LH   S  ++H D+KP NI        ++ DFGL   +  ++ +   
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177

Query: 680 --------IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
                     T   GTK Y++PE    ++ + KVD++S G++L E++     F  +M   
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-- 232

Query: 732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                       R   L D+       L   K   + VMV    +   P  RP    +++
Sbjct: 233 ------------RVRTLTDVRNLKFPPLFTQKYPCEYVMVQ-DMLSPSPMERPEAINIIE 279

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  147 bits (373), Expect = 4e-38
 Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 47/282 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKN 580
             + +G+G FG V  G     +     VAVK +    ++    + F  E  V+ Q  H N
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNK-----VAVKCI----KNDATAQAFLAEASVMTQLRHSN 247

Query: 581 LVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHE 637
           LV+LLG   E +  L +V E++  G+L  +L    +           +  +   + YL  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE- 306

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
                 +H D+  +N+L+ +   A++SDFGL K  +  Q    +  ++ T    APE  R
Sbjct: 307 --GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPVKWT----APEALR 359

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
               + K DV+SFG+LL EI S         G   Y  +          + +   VE   
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSF--------GRVPYPRIP--------LKDVVPRVEKGY 403

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            M+A +   C   +  VM + W    D + RPT  ++ + LE
Sbjct: 404 KMDAPDG--CPPAVYDVMKNCW--HLDAATRPTFLQLREQLE 441

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  142 bits (361), Expect = 5e-38
 Identities = 75/286 (26%), Positives = 114/286 (39%), Gaps = 41/286 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL---DRVFQDGEKEFKNEVVVIGQTHHK 579
             E++G GSFG+V +G        T +VAVK L        +   +F  EV  +    H+
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHE 637
           NL+RL G         +V E    G+L   L  + +  + L T    A Q+A G+ YL  
Sbjct: 82  NLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLE- 138

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APE 694
             S + IH D+  +N+LL      +I DFGL + L  N            K      APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPE 194

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE 753
             +  T +   D + FGV L E+ +         G+E +  L           ++   ++
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTY--------GQEPWIGLN--------GSQILHKID 238

Query: 754 GD---MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            +   +    D  C + +  VMV  W     P  RPT   +   L 
Sbjct: 239 KEGERLPRPED--CPQDIYNVMVQCW--AHKPEDRPTFVALRDFLL 280

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  142 bits (360), Expect = 6e-38
 Identities = 66/290 (22%), Positives = 116/290 (40%), Gaps = 48/290 (16%)

Query: 523 FKEEVGRGSFGIVYKGV----ILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           F E +G+G+F  ++KGV        +   T V +K LD+  ++  + F     ++ +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN---LKPSWNLRTNIAFQIARGLLYL 635
           K+LV   G C  G   +LV EF+  G+L ++L  N   +   W L   +A Q+A  + +L
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL--EVAKQLAAAMHFL 129

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNAR--------ISDFGLAKLLTLNQSKAIRTAIRGT 687
                  +IH ++  +NILL    + +        +SD G++  +        R  I   
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER--IPWV 184

Query: 688 KGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRN 745
                PE   N        D +SFG  L EI S         G++  + L          
Sbjct: 185 ----PPECIENPKNLNLATDKWSFGTTLWEICS--------GGDKPLSALDS-------Q 225

Query: 746 EKLDDLVEGD-MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            KL    +   + A          ++ +      +P  RP+ + +++ L 
Sbjct: 226 RKLQFYEDRHQLPAPKA--AELANLINNCM--DYEPDHRPSFRAIIRDLN 271

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  142 bits (361), Expect = 6e-38
 Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 43/293 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNL 581
               +G+G FG+VY G  +    +    A+K L R+ +  +   F  E +++   +H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 582 VRLLGFCDEGQNRLL-VYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 638
           + L+G     +     +  ++ +G L  F+    + +  ++   +   Q+ARG+ YL   
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLA-- 141

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA------IRGTKGYVA 692
              + +H D+  +N +LD+ +  +++DFGLA+ +   +  +++        ++ T    A
Sbjct: 142 -EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----A 196

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDL 751
            E  +    T K DV+SFGVLL E+++         G   Y  +            L   
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLT--------RGAPPYRHID--------PFDLTHF 240

Query: 752 VE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           +     +       C + L  VM   W  + DP++RPT + ++  +E +V   
Sbjct: 241 LAQGRRLPQPEY--CPDSLYQVMQQCW--EADPAVRPTFRVLVGEVEQIVSAL 289

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  146 bits (370), Expect = 7e-38
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 37/279 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            + ++G+G FG V+ G    T    T VA+K L       E  F  E  V+ +  H+ LV
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGT----TRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLV 242

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L     E +   +V E+++ G+L  FL G       L    ++A QIA G+ Y+     
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---R 298

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWFR 697
              +H D++  NIL+ +    +++DFGLA+L+  N+    +  +  I+ T    APE   
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAAL 354

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD-- 755
               T K DV+SFG+LL E+ +  +         Y  +         N ++ D VE    
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRV-------PYPGMV--------NREVLDQVERGYR 399

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           M    +  C E L  +   C +++P  RPT + +   LE
Sbjct: 400 MPCPPE--CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  142 bits (359), Expect = 8e-38
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 35/278 (12%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E+G G+FG V KG     +     VAVK  K +      + E   E  V+ Q  +  +VR
Sbjct: 24  ELGSGNFGTVKKGY-YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 83  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-E--ESNF 138

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFRNST 700
           +H D+  +N+LL   + A+ISDFGL+K L  +++     A    K  V   APE      
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGKWPVKWYAPECINYYK 196

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD-MEA 758
            ++K DV+SFGVL+ E  S         G++ Y  +         +E    L +G+ M  
Sbjct: 197 FSSKSDVWSFGVLMWEAFSY--------GQKPYRGMKG-------SEVTAMLEKGERMGC 241

Query: 759 LNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
                C  ++  +M   W    D   RP    V   L 
Sbjct: 242 PAG--CPREMYDLMNLCW--TYDVENRPGFAAVELRLR 275

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  141 bits (359), Expect = 1e-37
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 41/282 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            K ++G G +G VY+GV    +  +  VAVK L     +  +EF  E  V+ +  H NLV
Sbjct: 17  MKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +LLG C       ++ EF+  G L  +L    +   +      +A QI+  + YL     
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---K 129

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA---IRGTKGYVAPEWFR 697
              IH D+  +N L+ + +  +++DFGL++L+T +   A   A   I+ T    APE   
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLA 185

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
            +  + K DV++FGVLL EI +         G   Y  +           ++ +L+E D 
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT--------YGMSPYPGID--------LSQVYELLEKDY 229

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            ME      C EK+  +M + W  Q +PS RP+  ++ Q  E
Sbjct: 230 RMERPEG--CPEKVYELMRACW--QWNPSDRPSFAEIHQAFE 267

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  142 bits (361), Expect = 1e-37
 Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 40/297 (13%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVV 571
           +  +E      + +G G FG V+KGV I    +    V +K ++        +   + ++
Sbjct: 8   RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 67

Query: 572 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIA 629
            IG   H ++VRLLG C  G +  LV ++L  G+L   +  + + +   +   N   QIA
Sbjct: 68  AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIA 125

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
           +G+ YL E     ++H ++  +N+LL      +++DFG+A LL  +  +         K 
Sbjct: 126 KGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ---LLYSEAKT 179

Query: 690 YV---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRN 745
            +   A E       T + DV+S+GV + E+++         G E YA L          
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF--------GAEPYAGLR--------L 223

Query: 746 EKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            ++ DL+E    +       C   +  VMV  W    D ++RPT K++      +  
Sbjct: 224 AEVPDLLEKGERLAQPQI--CTIDVYMVMVKCW--MIDENIRPTFKELANEFTRMAR 276

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  142 bits (361), Expect = 1e-37
 Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 51/310 (16%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHK 579
              E+G+GSFG+VY+GV   +      T VA+K ++      E+ EF NE  V+ + +  
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT----------NIAFQIA 629
           ++VRLLG   +GQ  L++ E +  G L S+L        N              +A +IA
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
            G+ YL+   + + +H D+  +N ++ + +  +I DFG+ +   + ++   R   +G KG
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD--IYETDYYR---KGGKG 200

Query: 690 YV-----APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCY 743
            +     +PE  ++   T   DV+SFGV+L EI +        + E+ Y  L+       
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------LAEQPYQGLS------- 245

Query: 744 RNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV 799
            NE++   V   G ++  ++  C + L  +M   W  Q +P +RP+  +++  ++  +E 
Sbjct: 246 -NEQVLRFVMEGGLLDKPDN--CPDMLFELMRMCW--QYNPKMRPSFLEIISSIKEEMEP 300

Query: 800 SLPPNPYPFS 809
                 + +S
Sbjct: 301 GFREVSFYYS 310

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  146 bits (371), Expect = 2e-37
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 37/279 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            + ++G+G FG V+ G    T    T VA+K L +      + F  E  V+ +  H+ LV
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGT----TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L     E +   +V E+++ G+L  FL G       L    ++A QIA G+ Y+     
Sbjct: 326 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---R 381

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWFR 697
              +H D++  NIL+ +    +++DFGLA+L+  N+    +  +  I+ T    APE   
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAAL 437

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD-- 755
               T K DV+SFG+LL E+ +  +         Y  +         N ++ D VE    
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRV-------PYPGMV--------NREVLDQVERGYR 482

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           M    +  C E L  +   C +++P  RPT + +   LE
Sbjct: 483 MPCPPE--CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  144 bits (366), Expect = 2e-37
 Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 39/283 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKN 580
             K+ +G G+ G +    +   R     VAVK++             EV ++ +   H N
Sbjct: 27  CPKDVLGHGAEGTIVYRGMFDNR----DVAVKRILPEC---FSFADREVQLLRESDEHPN 79

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-NIAFQIARGLLYLHEDC 639
           ++R      + Q + +  E L   TL  ++         L    +  Q   GL +LH   
Sbjct: 80  VIRYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH--- 135

Query: 640 SAQIIHCDIKPQNILL-----DDYYNARISDFGLAKLLTLNQ-SKAIRTAIRGTKGYVAP 693
           S  I+H D+KP NIL+          A ISDFGL K L + + S + R+ + GT+G++AP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195

Query: 694 EWFRNSTI---TAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNEKL 748
           E          T  VD++S G +   +IS            +   +L   + DC     L
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC-----L 250

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                 D+ A   I+            I  DP  RP+ K VL+
Sbjct: 251 HPEKHEDVIARELIE----------KMIAMDPQKRPSAKHVLK 283

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  143 bits (362), Expect = 2e-37
 Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 35/291 (12%)

Query: 514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVV 572
           KEL+    +  + VG G FG V  G +        +VA+K L   + + ++ +F  E  +
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIAR 630
           +GQ  H N++RL G   + +  ++V E++ NG+L SFL  +    + +     +   IA 
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIAS 158

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           G+ YL        +H D+  +NIL++     ++SDFGL ++L  +   A  T  RG K  
Sbjct: 159 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT--RGGKIP 213

Query: 691 V---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNE 746
           +   +PE       T+  DV+S+G++L E++S         GE  Y  +++        +
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS--------YGERPYWEMSN-------QD 258

Query: 747 KLDDLVEGD-MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            +  + EG  +    D  C   L  +M+  W  Q+D + RP  ++++ +L+
Sbjct: 259 VIKAVDEGYRLPPPMD--CPAALYQLMLDCW--QKDRNNRPKFEQIVSILD 305

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  142 bits (359), Expect = 2e-37
 Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 57/317 (17%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHK 579
               +G G+FG VY+G +  +    S   VAVK L  V  + ++ +F  E ++I + +H+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-------NIAFQIARGL 632
           N+VR +G   +   R ++ E +  G L SFL           +       ++A  IA G 
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNAR---ISDFGLAKLLTLN-----QSKAIRTAI 684
            YL        IH DI  +N LL      R   I DFG+A+ +           A    +
Sbjct: 154 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 209

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCY 743
           +       PE F     T+K D +SFGVLL EI S        +G   Y   +       
Sbjct: 210 KWM----PPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKS------- 250

Query: 744 RNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEG---- 795
            N+++ + V   G M+   +  C   +  +M   W  Q  P  RP    +L+ +E     
Sbjct: 251 -NQEVLEFVTSGGRMDPPKN--CPGPVYRIMTQCW--QHQPEDRPNFAIILERIEYCTQD 305

Query: 796 --VVEVSLPPNPYPFSS 810
             V+  +LP    P   
Sbjct: 306 PDVINTALPIEYGPLVE 322

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  140 bits (354), Expect = 3e-37
 Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 43/282 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             +E+G G FG+V  G           VAVK +       E EF  E   + +  H  LV
Sbjct: 12  LLKELGSGQFGVVKLGKW----KGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLV 66

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +  G C +     +V E+++NG L ++L  +            + + +  G+ +L    S
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLE---S 122

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWFR 697
            Q IH D+  +N L+D     ++SDFG+ + +  +Q   S   +  ++ +    APE F 
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS----APEVFH 178

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
               ++K DV++FG+L+ E+ S        +G+  Y + T        N ++   V    
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFS--------LGKMPYDLYT--------NSEVVLKVSQGH 222

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            +   +     + +  +M S W   E P  RPT +++L  +E
Sbjct: 223 RLYRPHL--ASDTIYQIMYSCW--HELPEKRPTFQQLLSSIE 260

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  140 bits (355), Expect = 3e-37
 Identities = 76/305 (24%), Positives = 125/305 (40%), Gaps = 47/305 (15%)

Query: 500 GDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF 559
           G      +    S   L        + +G+G FG V  G     +     VAVK +    
Sbjct: 2   GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK-----VAVKCI---- 52

Query: 560 QDG--EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKP 616
           ++    + F  E  V+ Q  H NLV+LLG   E +  L +V E++  G+L  +L    + 
Sbjct: 53  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112

Query: 617 SWNLRT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL 674
                     +  +   + YL        +H D+  +N+L+ +   A++SDFGL K  + 
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169

Query: 675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YA 733
            Q    +  ++ T    APE  R    + K DV+SFG+LL EI S         G   Y 
Sbjct: 170 TQDTG-KLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYS--------FGRVPYP 216

Query: 734 ILTDWAFDCYRNEKLDDLVEGD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKV 789
            +          + +   VE    M+A +   C   +  VM + W    D ++RP+  ++
Sbjct: 217 RIP--------LKDVVPRVEKGYKMDAPDG--CPPAVYEVMKNCW--HLDAAMRPSFLQL 264

Query: 790 LQMLE 794
            + LE
Sbjct: 265 REQLE 269

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  140 bits (355), Expect = 3e-37
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 30/272 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           +G+G++GIVY G  L+ +     +A+K++        +    E+ +     HKN+V+ LG
Sbjct: 30  LGKGTYGIVYAGRDLSNQV---RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86

Query: 587 FCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
              E     +  E +  G+L++ L   +G LK +         QI  GL YLH++   QI
Sbjct: 87  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 143

Query: 644 IHCDIKPQNILLDDYY-NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI- 701
           +H DIK  N+L++ Y    +ISDFG +K L             GT  Y+APE        
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAPEIIDKGPRG 201

Query: 702 -TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
                D++S G  ++E+ + +  F  E+GE  A +    F     +   ++ E       
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAM----FKVGMFKVHPEIPESMSAEAK 256

Query: 761 D-IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             I            C + DP  R     +L 
Sbjct: 257 AFILK----------CFEPDPDKRACANDLLV 278

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  141 bits (358), Expect = 3e-37
 Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 52/334 (15%)

Query: 484 LSFFFIYKKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEV-----------GRGSF 532
           +S++  +      +     T           +  +A   F  E+           G G F
Sbjct: 1   MSYYHHHHH---HDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEF 57

Query: 533 GIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNLVRLLGFCDE 590
           G VYKG+   ++      VA+K L   + + ++ +F  E  ++GQ  H N++RL G   +
Sbjct: 58  GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 117

Query: 591 GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCSAQIIHCDI 648
            +  +++ E++ NG L  FL       +++     +   IA G+ YL    +   +H D+
Sbjct: 118 YKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDL 173

Query: 649 KPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFRNSTITAKV 705
             +NIL++     ++SDFGL+++L  +      T   G K  +   APE       T+  
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT--SGGKIPIRWTAPEAISYRKFTSAS 231

Query: 706 DVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD--MEALNDI 762
           DV+SFG+++ E+++         GE  Y  L+        N ++   +     +    D 
Sbjct: 232 DVWSFGIVMWEVMT--------YGERPYWELS--------NHEVMKAINDGFRLPTPMD- 274

Query: 763 KCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            C   +  +M+  W  Q++ + RP    ++ +L+
Sbjct: 275 -CPSAIYQLMMQCW--QQERARRPKFADIVSILD 305

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  139 bits (353), Expect = 5e-37
 Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 38/282 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNL 581
               +G G FG VY+GV    +     VAVK        D +++F +E V++    H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDC 639
           V+L+G  +E +   ++ E    G L  +L  N K S  + T    + QI + + YL    
Sbjct: 76  VKLIGIIEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE--- 130

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWF 696
           S   +H DI  +NIL+      ++ DFGL++ +              T+  +   +PE  
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY----YKASVTRLPIKWMSPESI 186

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD 755
                T   DV+ F V + EI+S         G++ +  L +        + +  L +GD
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLEN-------KDVIGVLEKGD 231

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            +   +   C   L  +M   W    DPS RP   +++  L 
Sbjct: 232 RLPKPDL--CPPVLYTLMTRCW--DYDPSDRPRFTELVCSLS 269

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  139 bits (352), Expect = 5e-37
 Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 43/286 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           F +E+G G FG+V+ G  L        VA+K + R     E++F  E  V+ +  H  LV
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNK----DKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L G C E     LV EF+ +G L+ +L    +  +   T   +   +  G+ YL     
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL---EE 122

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA---IRGTKGYVAPEWFR 697
           A +IH D+  +N L+ +    ++SDFG+ + +  +Q  +       ++      +PE F 
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA----SPEVFS 178

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
            S  ++K DV+SFGVL+ E+ S         G+  Y   +        N ++ + +    
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFS--------EGKIPYENRS--------NSEVVEDISTGF 222

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            +           +  +M   W  +E P  RP   ++L+ L  + E
Sbjct: 223 RLYKPRL--ASTHVYQIMNHCW--RERPEDRPAFSRLLRQLAEIAE 264

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  140 bits (354), Expect = 5e-37
 Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 54/305 (17%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L+       VAVK L        K+F+ E  ++    H++
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN----------------I 624
           +V+  G C +G   ++V+E++ +G L  FL  +   +  L                   I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA- 683
           A QIA G++YL    S   +H D+  +N L+      +I DFG+++ +       +    
Sbjct: 139 ASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195

Query: 684 ---IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 739
              IR       PE       T + DV+SFGV+L EI +         G++ +  L+   
Sbjct: 196 MLPIRWM----PPESIMYRKFTTESDVWSFGVILWEIFTY--------GKQPWFQLS--- 240

Query: 740 FDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEG 795
                N ++ + +     +E      C +++  VM+  W  Q +P  R  +K++ ++L  
Sbjct: 241 -----NTEVIECITQGRVLERPRV--CPKEVYDVMLGCW--QREPQQRLNIKEIYKILHA 291

Query: 796 VVEVS 800
           + + +
Sbjct: 292 LGKAT 296

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  139 bits (352), Expect = 7e-37
 Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 37/281 (13%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             E+G G+FG V +GV    R     VA+K L     +   +E   E  ++ Q  +  +V
Sbjct: 15  DIELGCGNFGSVRQGV-YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCS 640
           RL+G C + +  +LV E    G L  FL G  +  P  N+   +  Q++ G+ YL     
Sbjct: 74  RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYL---EE 128

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFR 697
              +H D+  +N+LL + + A+ISDFGL+K L  + S    TA    K  +   APE   
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECIN 186

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
               +++ DV+S+GV + E +S         G++ Y  +          E +  + +G  
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALS--------YGQKPYKKMKG-------PEVMAFIEQGKR 231

Query: 756 MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
           ME   +  C  +L  +M   W        RP    V Q + 
Sbjct: 232 MECPPE--CPPELYALMSDCW--IYKWEDRPDFLTVEQRMR 268

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  139 bits (352), Expect = 1e-36
 Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 47/297 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKN 580
             + +G G FG V +G +     ++  VAVK  KLD   Q   +EF +E   +    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 581 LVRLLGFCDEGQNR-----LLVYEFLNNGTLASFL----FGNLKPSWNLRT--NIAFQIA 629
           ++RLLG C E  ++     +++  F+  G L ++L             L+T       IA
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----QSKAIRTAIR 685
            G+ YL    +   +H D+  +N +L D     ++DFGL+K +       Q +  +  ++
Sbjct: 158 LGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214

Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYR 744
                 A E   +   T+K DV++FGV + EI +         G   Y  + +       
Sbjct: 215 WI----AIESLADRVYTSKSDVWAFGVTMWEIAT--------RGMTPYPGVQNH------ 256

Query: 745 NEKLDDLVEGD-MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            E  D L+ G  ++   D  C+++L  +M S W  + DP  RPT   +   LE ++E
Sbjct: 257 -EMYDYLLHGHRLKQPED--CLDELYEIMYSCW--RTDPLDRPTFSVLRLQLEKLLE 308

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  142 bits (361), Expect = 1e-36
 Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 41/281 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            ++++G G FG V+           T VAVK + +      + F  E  V+    H  LV
Sbjct: 192 LEKKLGAGQFGEVWMATY----NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L     + +   ++ EF+  G+L  FL  +      L    + + QIA G+ ++     
Sbjct: 247 KLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 302

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFR 697
              IH D++  NIL+      +I+DFGLA+++  N+     TA  G K  +   APE   
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----YTAREGAKFPIKWTAPEAIN 358

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
             + T K DV+SFG+LL+EI++         G   Y  +++        E +  L  G  
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTY--------GRIPYPGMSN-------PEVIRALERGYR 403

Query: 756 MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
           M    +  C E+L  +M+  W  +  P  RPT + +  +L+
Sbjct: 404 MPRPEN--CPEELYNIMMRCW--KNRPEERPTFEYIQSVLD 440

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  138 bits (350), Expect = 1e-36
 Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 43/286 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           F +E+G G FG+V  G           VA+K + +     E EF  E  V+    H+ LV
Sbjct: 28  FLKELGTGQFGVVKYGKW----RGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           +L G C + +   ++ E++ NG L ++L    +  +  +    +   +   + YL    S
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---S 138

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV---APEWFR 697
            Q +H D+  +N L++D    ++SDFGL++ +  ++     T+  G+K  V    PE   
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSSVGSKFPVRWSPPEVLM 194

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
            S  ++K D+++FGVL+ EI S         G+  Y   T        N +  + +    
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSL--------GKMPYERFT--------NSETAEHIAQGL 238

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            +   +     EK+  +M S W   E    RPT K +L  +  V++
Sbjct: 239 RLYRPHL--ASEKVYTIMYSCW--HEKADERPTFKILLSNILDVMD 280

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  138 bits (349), Expect = 2e-36
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 54/288 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E +G G FG V+K              +K++        ++ + EV  + +  H N+V  
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGK---TYVIKRVKY----NNEKAEREVKALAKLDHVNIVHY 69

Query: 585 LG-FCDEGQNRL---------------LVYEFLNNGTLASFL---FGNLKPSWNLRTNIA 625
            G +     +                 +  EF + GTL  ++    G           + 
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL-ELF 128

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
            QI +G+ Y+H   S ++I+ D+KP NI L D    +I DFGL   L    +   RT  +
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDGKRTRSK 182

Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 745
           GT  Y++PE   +     +VD+Y+ G++L E++    +   E  + +  L        R+
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF-ETSKFFTDL--------RD 233

Query: 746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML 793
             + D+ +   + L  ++            + + P  RP   ++L+ L
Sbjct: 234 GIISDIFDKKEKTL--LQ----------KLLSKKPEDRPNTSEILRTL 269

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  139 bits (352), Expect = 2e-36
 Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)

Query: 523 FKEEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHKN 580
             + +G G+FG VYKG+ I         VA+K+L +       KE  +E  V+    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHED 638
           + RLLG C       L+ + +  G L  ++  + K +   +   N   QIA+G+ YL + 
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLED- 135

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----QSKAIRTAIRGTKGYVAPE 694
              +++H D+  +N+L+    + +I+DFGLAKLL        ++  +  I+      A E
Sbjct: 136 --RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM----ALE 189

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE 753
              +   T + DV+S+GV + E+++         G + Y  +           ++  ++E
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT--------FGSKPYDGIP--------ASEISSILE 233

Query: 754 GD--MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
               +       C   +  +MV  W    D   RP  ++++    
Sbjct: 234 KGERLPQPPI--CTIDVYMIMVKCW--MIDADSRPKFRELIIEFS 274

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  140 bits (354), Expect = 2e-36
 Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 57/317 (17%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHK 579
               +G G+FG VY+G +  +    S   VAVK L  V  + ++ +F  E ++I + +H+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-------NIAFQIARGL 632
           N+VR +G   +   R ++ E +  G L SFL           +       ++A  IA G 
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNAR---ISDFGLAKLLTLN-----QSKAIRTAI 684
            YL        IH DI  +N LL      R   I DFG+A+ +           A    +
Sbjct: 195 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA-MLPV 250

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCY 743
           +       PE F     T+K D +SFGVLL EI S        +G   Y   +       
Sbjct: 251 KWM----PPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKS------- 291

Query: 744 RNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEG---- 795
            N+++ + V   G M+   +  C   +  +M   W  Q  P  RP    +L+ +E     
Sbjct: 292 -NQEVLEFVTSGGRMDPPKN--CPGPVYRIMTQCW--QHQPEDRPNFAIILERIEYCTQD 346

Query: 796 --VVEVSLPPNPYPFSS 810
             V+  +LP    P   
Sbjct: 347 PDVINTALPIEYGPLVE 363

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  137 bits (347), Expect = 3e-36
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 40/283 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNL 581
               +G G FG V++G+ ++      AVA+K       D  + +F  E + + Q  H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDC 639
           V+L+G   E     ++ E    G L SFL    K S +L +    A+Q++  L YL    
Sbjct: 79  VKLIGVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE--- 133

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWF 696
           S + +H DI  +N+L+      ++ DFGL++ +  +    +   +  I+      APE  
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM----APESI 189

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE-- 753
                T+  DV+ FGV + EI+          G + +  +         N  +   +E  
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILM--------HGVKPFQGVK--------NNDVIGRIENG 233

Query: 754 GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
             +    +  C   L  +M   W    DPS RP   ++   L 
Sbjct: 234 ERLPMPPN--CPPTLYSLMTKCW--AYDPSRRPRFTELKAQLS 272

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  137 bits (347), Expect = 3e-36
 Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 37/286 (12%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQT 576
           ++++    +G GS+G   K    +       +  K+LD         +   +EV ++ + 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKI---LVWKELDYGSMTEAEKQMLVSEVNLLREL 62

Query: 577 HHKNLVRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIAR 630
            H N+VR      D     L +V E+   G LAS +    K    L       +  Q+  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122

Query: 631 GLLYLHE--DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            L   H   D    ++H D+KP N+ LD   N ++ DFGLA++L  + S A +T + GT 
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KTFV-GTP 180

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            Y++PE     +   K D++S G LL E+ +    F          L             
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL------------A 225

Query: 749 DDLVEGDMEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
             + EG    +       + +++      +      RP+++++L+ 
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIIT---RMLNLKDYHRPSVEEILEN 268

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  138 bits (349), Expect = 4e-36
 Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 55/305 (18%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN 580
            K E+G G+FG V+      L        VAVK L    +   ++F+ E  ++    H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN---------------IA 625
           +VR  G C EG+  L+V+E++ +G L  FL  +   +  L                  +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN-----QSKAI 680
            Q+A G++YL        +H D+  +N L+      +I DFG+++ +          +  
Sbjct: 165 SQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT- 220

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 739
              IR       PE       T + DV+SFGV+L EI +         G++ +  L+   
Sbjct: 221 MLPIRWM----PPESILYRKFTTESDVWSFGVVLWEIFT--------YGKQPWYQLS--- 265

Query: 740 FDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEG 795
                N +  D +    ++E      C  ++  +M   W  Q +P  R ++K V   L+ 
Sbjct: 266 -----NTEAIDCITQGRELERPRA--CPPEVYAIMRGCW--QREPQQRHSIKDVHARLQA 316

Query: 796 VVEVS 800
           + +  
Sbjct: 317 LAQAP 321

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  140 bits (355), Expect = 5e-36
 Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 56/302 (18%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKN 580
             ++ +G GS G V        R     VAVK++   F D       E+ ++ ++  H N
Sbjct: 18  VSEKILGYGSSGTVVFQGSFQGR----PVAVKRMLIDFCD---IALMEIKLLTESDDHPN 70

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-------NIAFQIARGLL 633
           ++R        +   +  E L N  L   +        NL+        ++  QIA G+ 
Sbjct: 71  VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129

Query: 634 YLHEDCSAQIIHCDIKPQNILLD-------------DYYNARISDFGLAKLLTLNQSKAI 680
           +LH   S +IIH D+KPQNIL+              +     ISDFGL K L   QS   
Sbjct: 130 HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186

Query: 681 RTA--IRGTKGYVAPEWFRNSTI-------TAKVDVYSFGVLLLEIISCRKS-FDIEMGE 730
                  GT G+ APE    S         T  +D++S G +   I+S  K  F  +   
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246

Query: 731 EYAILT-DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV 789
           E  I+   ++ D  +      L+    EA + I             I  DP  RPT  KV
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIA---EATDLIS----------QMIDHDPLKRPTAMKV 293

Query: 790 LQ 791
           L+
Sbjct: 294 LR 295

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  139 bits (352), Expect = 5e-36
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 60/310 (19%)

Query: 523 FKEEVGRGSFGIVYKG----VILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-T 576
             + +G G FG V       +          VAVK L     + +  +  +E+ ++    
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------------- 623
            HKN++ LLG C +     ++ E+ + G L  +L     P      +             
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 624 ---IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----- 675
                +Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAI 734
            +   R  ++      APE   +   T + DV+SFGVL+ EI +        +G   Y  
Sbjct: 262 TTNG-RLPVKWM----APEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPG 308

Query: 735 LTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVL 790
           +          E+L  L++    M+   +  C  +L  +M   W     PS RPT K+++
Sbjct: 309 IP--------VEELFKLLKEGHRMDKPAN--CTNELYMMMRDCW--HAVPSQRPTFKQLV 356

Query: 791 QMLEGVVEVS 800
           + L+ ++ ++
Sbjct: 357 EDLDRILTLT 366

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  137 bits (348), Expect = 5e-36
 Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 48/298 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKN 580
               +G+G FG V +  +     S   VAVK  K D +     +EF  E   + +  H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 581 LVRLLGFCDEGQNR------LLVYEFLNNGTLASFLFGNLKPSWNLR------TNIAFQI 628
           + +L+G     + +      +++  F+ +G L +FL  +                    I
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----QSKAIRTAI 684
           A G+ YL    S   IH D+  +N +L +     ++DFGL++ +       Q  A +  +
Sbjct: 147 ACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCY 743
           +      A E   ++  T   DV++FGV + EI++         G+  YA + +      
Sbjct: 204 KWL----ALESLADNLYTVHSDVWAFGVTMWEIMT--------RGQTPYAGIENA----- 246

Query: 744 RNEKLDDLVEGD-MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             E  + L+ G+ ++   +  C+E++  +M   W    DP  RP+   +   LE ++ 
Sbjct: 247 --EIYNYLIGGNRLKQPPE--CMEEVYDLMYQCW--SADPKQRPSFTCLRMELENILG 298

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  136 bits (345), Expect = 6e-36
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 43/282 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             E +G G FG V+ G         T VAVK L +        F  E  ++ Q  H+ LV
Sbjct: 17  LVERLGAGQFGEVWMGYY----NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           RL     + +   ++ E++ NG+L  FL         +    ++A QIA G+ ++     
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 127

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ---SKAIRTAIRGTKGYVAPEWFR 697
              IH D++  NIL+ D  + +I+DFGLA+L+  N+    +  +  I+ T    APE   
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAIN 183

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD- 755
             T T K DV+SFG+LL EI++         G   Y  +T        N ++   +E   
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT--------HGRIPYPGMT--------NPEVIQNLERGY 227

Query: 756 -MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
            M   ++  C E+L  +M   W  +E P  RPT   +  +LE
Sbjct: 228 RMVRPDN--CPEELYQLMRLCW--KERPEDRPTFDYLRSVLE 265

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  137 bits (346), Expect = 7e-36
 Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 49/296 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
               +G+G+FG V K             A+KK+    ++      +EV+++   +H+ +V
Sbjct: 10  EIAVLGQGAFGQVVKARNALDSRY---YAIKKIRHT-EEKLSTILSEVMLLASLNHQYVV 65

Query: 583 RLLGFCDEGQNRL-------------LVYEFLNNGTLASFL-FGNLKPSWNLRTNIAFQI 628
           R      E +N +             +  E+  NGTL   +   NL    +    +  QI
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR--- 685
              L Y+H   S  IIH D+KP NI +D+  N +I DFGLAK +  +       +     
Sbjct: 126 LEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182

Query: 686 ---------GTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
                    GT  YVA E    +     K+D+YS G++  E+I    S  +E       L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-YPFSTGMERVNILKKL 241

Query: 736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              + +       DD      + +  I+            I  DP+ RP  + +L 
Sbjct: 242 RSVSIEF--PPDFDDNKMKVEKKI--IR----------LLIDHDPNKRPGARTLLN 283

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  137 bits (346), Expect = 1e-35
 Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 60/314 (19%)

Query: 523 FKEEVGRGSFGIVYKG----VILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-T 576
             + +G G+FG V       +          VAVK L     + +  +  +E+ ++    
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN------------- 623
            HKN++ LLG C +     ++ E+ + G L  +L     P      +             
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 624 ---IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----- 675
                +Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAI 734
            +   R  ++      APE   +   T + DV+SFGVL+ EI +        +G   Y  
Sbjct: 216 TTNG-RLPVKWM----APEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPG 262

Query: 735 LTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVL 790
           +          E+L  L++    M+   +  C  +L  +M   W     PS RPT K+++
Sbjct: 263 IP--------VEELFKLLKEGHRMDKPAN--CTNELYMMMRDCW--HAVPSQRPTFKQLV 310

Query: 791 QMLEGVVEVSLPPN 804
           + L+ ++ ++    
Sbjct: 311 EDLDRILTLTTNEE 324

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  135 bits (342), Expect = 2e-35
 Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 57/301 (18%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKL-DRVFQDGEKEFKNEVVVIGQTHHK 579
           F EE+G   FG VYKG +        T AVA+K L D+      +EF++E ++  +  H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN---------------- 623
           N+V LLG   + Q   +++ + ++G L  FL      S    T+                
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN-----QSK 678
           +  QIA G+ YL    S  ++H D+  +N+L+ D  N +ISD GL + +           
Sbjct: 133 LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 737
           +    IR      APE       +   D++S+GV+L E+ S         G + Y   + 
Sbjct: 190 S-LLPIRWM----APEAIMYGKFSIDSDIWSYGVVLWEVFS--------YGLQPYCGYS- 235

Query: 738 WAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQML 793
                  N+ + +++     +   +D  C   +  +M+  W   E PS RP  K +   L
Sbjct: 236 -------NQDVVEMIRNRQVLPCPDD--CPAWVYALMIECW--NEFPSRRPRFKDIHSRL 284

Query: 794 E 794
            
Sbjct: 285 R 285

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  135 bits (343), Expect = 2e-35
 Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-THH 578
           F + +G G+FG V +     L    +   VAVK L       E+    +E+ V+    +H
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN--------------- 623
            N+V LLG C  G   L++ E+   G L +FL          +T+               
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 624 ---IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----- 675
               ++Q+A+G+ +L    S   IH D+  +NILL      +I DFGLA+ +  +     
Sbjct: 147 LLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEE-Y 732
           +  A R  ++      APE   N   T + DV+S+G+ L E+ S   S    + +  + Y
Sbjct: 204 KGNA-RLPVKWM----APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258

Query: 733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVL 790
            ++ +     +R    +                 ++  +M + W    DP  RPT K+++
Sbjct: 259 KMIKEG----FRMLSPEH-------------APAEMYDIMKTCW--DADPLKRPTFKQIV 299

Query: 791 QMLEGVVEVS 800
           Q++E  +  S
Sbjct: 300 QLIEKQISES 309

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  142 bits (359), Expect = 2e-35
 Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 40/283 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHKNL 581
               +G G FG V++G+ ++      AVA+K       D  + +F  E + + Q  H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDC 639
           V+L+G   E     ++ E    G L SFL    K S +L +    A+Q++  L YL    
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE--- 508

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN---QSKAIRTAIRGTKGYVAPEWF 696
           S + +H DI  +N+L+      ++ DFGL++ +  +   ++   +  I+      APE  
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM----APESI 564

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVE-- 753
                T+  DV+ FGV + EI+          G + +  +         N  +   +E  
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMH--------GVKPFQGVK--------NNDVIGRIENG 608

Query: 754 GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
             +    +  C   L  +M   W    DPS RP   ++   L 
Sbjct: 609 ERLPMPPN--CPPTLYSLMTKCW--AYDPSRRPRFTELKAQLS 647

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  136 bits (344), Expect = 4e-35
 Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 40/283 (14%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK---NEVVVIGQ 575
           + +   +++G GSFG                  +K+++       KE +    EV V+  
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQ---YVIKEINISRMS-SKEREESRREVAVLAN 79

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL----FGNLKPSWNLRTNIAFQIARG 631
             H N+V+     +E  +  +V ++   G L   +        +    L      QI   
Sbjct: 80  MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILD--WFVQICLA 137

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L ++H     +I+H DIK QNI L      ++ DFG+A++L      A R  I GT  Y+
Sbjct: 138 LKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA-RACI-GTPYYL 192

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           +PE   N     K D+++ G +L E+ + + +F+         L            +  +
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNL------------VLKI 237

Query: 752 VEGDMEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
           + G    ++      +  LV       + +P  RP++  +L+ 
Sbjct: 238 ISGSFPPVSLHYSYDLRSLVS---QLFKRNPRDRPSVNSILEK 277

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  140 bits (354), Expect = 7e-35
 Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 37/297 (12%)

Query: 508 LPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL-DRVFQDGEKEF 566
           L         +       E+G G+FG V +GV    R     VA+K L     +   +E 
Sbjct: 325 LKDKKLFLKRDNLLIADIELGCGNFGSVRQGV-YRMRKKQIDVAIKVLKQGTEKADTEEM 383

Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNI 624
             E  ++ Q  +  +VRL+G C + +  +LV E    G L  FL G  +  P  N+   +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AEL 441

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
             Q++ G+ YL        +H ++  +N+LL + + A+ISDFGL+K L  + S    TA 
Sbjct: 442 LHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTAR 496

Query: 685 RGTKGYV---APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF 740
              K  +   APE       +++ DV+S+GV + E +S         G++ Y  +     
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY--------GQKPYKKMKG--- 545

Query: 741 DCYRNEKLDDLVEGD-MEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
                E +  + +G  ME   +  C  +L  +M   W        RP    V Q + 
Sbjct: 546 ----PEVMAFIEQGKRMECPPE--CPPELYALMSDCW--IYKWEDRPDFLTVEQRMR 594

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  134 bits (340), Expect = 8e-35
 Identities = 87/354 (24%), Positives = 144/354 (40%), Gaps = 66/354 (18%)

Query: 483 GLSFFFIYKKKW------IRNSPGDGTI---ETNLPCFSYKELEEATDNFKEEVGRGSFG 533
           G+ + +  K K+      I +  G+       T LP     E       F + +G G+FG
Sbjct: 1   GVDYKYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFG 60

Query: 534 IVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-THHKNLVRLLGFCD 589
            V +     L    +   VAVK L       EK    +E+ ++     H+N+V LLG C 
Sbjct: 61  KVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120

Query: 590 EGQNRLLVYEFLNNGTLASFL----------FGNLKPSWNLRTN----IAFQIARGLLYL 635
            G   L++ E+   G L +FL                +    T      + Q+A+G+ +L
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL 180

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN-----QSKAIRTAIRGTKGY 690
               S   IH D+  +N+LL + + A+I DFGLA+ +  +     +  A R  ++     
Sbjct: 181 A---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA-RLPVKWM--- 233

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAFDCYRNEKL 748
            APE   +   T + DV+S+G+LL EI S        +G      IL         N K 
Sbjct: 234 -APESIFDCVYTVQSDVWSYGILLWEIFS--------LGLNPYPGILV--------NSKF 276

Query: 749 DDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             LV+    M         + +  +M + W    +P+ RPT +++   L+   +
Sbjct: 277 YKLVKDGYQMAQPAF--APKNIYSIMQACW--ALEPTHRPTFQQICSFLQEQAQ 326

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  134 bits (339), Expect = 9e-35
 Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 56/308 (18%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-THH 578
             + +GRG+FG V +     +    +   VAVK L       E     +E+ ++    HH
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 579 KNLVRLLGFC-DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN-------------- 623
            N+V LLG C   G   +++ EF   G L+++L          +                
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150

Query: 624 --IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN-----Q 676
              +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207

Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAI 734
             A R  ++      APE   +   T + DV+SFGVLL EI S   S    +++ EE   
Sbjct: 208 GDA-RLPLKWM----APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--- 259

Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQM 792
                 +  R    D                 ++   M+  W    +PS RPT  ++++ 
Sbjct: 260 FCRRLKEGTRMRAPDY-------------TTPEMYQTMLDCW--HGEPSQRPTFSELVEH 304

Query: 793 LEGVVEVS 800
           L  +++ +
Sbjct: 305 LGNLLQAN 312

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  135 bits (342), Expect = 1e-34
 Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 60/310 (19%)

Query: 523 FKEEVGRGSFGIVYKGVIL----TTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-T 576
             + +G G+FG V     +          T VAVK L     + +  +  +E+ ++    
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL------------FGNLKPSWNLR--- 621
            HKN++ LLG C +     ++ E+ + G L  +L              +  P   L    
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 622 -TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----- 675
             + A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 193 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAI 734
            +   R  ++      APE   +   T + DV+SFGVLL EI +        +G   Y  
Sbjct: 250 TTNG-RLPVKWM----APEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPG 296

Query: 735 LTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVL 790
           +          E+L  L++    M+  ++  C  +L  +M   W     PS RPT K+++
Sbjct: 297 VP--------VEELFKLLKEGHRMDKPSN--CTNELYMMMRDCW--HAVPSQRPTFKQLV 344

Query: 791 QMLEGVVEVS 800
           + L+ +V ++
Sbjct: 345 EDLDRIVALT 354

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  133 bits (337), Expect = 1e-34
 Identities = 55/290 (18%), Positives = 116/290 (40%), Gaps = 54/290 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNL- 581
           +++G G    V++ +    +      A+K ++    D +    ++NE+  + +    +  
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQI----YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89

Query: 582 -VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
            +RL  +    Q   +V E   N  L S+L    ++ P    R +    +   +  +H  
Sbjct: 90  IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERKSYWKNMLEAVHTIH-- 144

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---- 694
               I+H D+KP N L+ D    ++ DFG+A  +  + +  ++ +  GT  Y+ PE    
Sbjct: 145 -QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202

Query: 695 -------WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
                      S I+ K DV+S G +L  +   +  F  ++  + + L         +  
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKL---------HAI 252

Query: 748 LDDLVEGDM------EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +D   E +       +  + +K           C++ DP  R ++ ++L 
Sbjct: 253 IDPNHEIEFPDIPEKDLQDVLK----------CCLKRDPKQRISIPELLA 292

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  133 bits (337), Expect = 2e-34
 Identities = 80/332 (24%), Positives = 136/332 (40%), Gaps = 60/332 (18%)

Query: 495 IRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKK 554
           ++        + N     Y  L+     F++ +G G+FG V K   +         A+K+
Sbjct: 1   MKKHHHHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKA-RIKKDGLRMDAAIKR 59

Query: 555 LDRVFQDGEK-EFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG 612
           +       +  +F  E+ V+ +  HH N++ LLG C+      L  E+  +G L  FL  
Sbjct: 60  MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 119

Query: 613 NLKPSWNLRTN----------------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD 656
           +     +                     A  +ARG+ YL      Q IH D+  +NIL+ 
Sbjct: 120 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVG 176

Query: 657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV-----APEWFRNSTITAKVDVYSFG 711
           + Y A+I+DFGL        S+     ++ T G +     A E    S  T   DV+S+G
Sbjct: 177 ENYVAKIADFGL--------SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 228

Query: 712 VLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLVEGD--MEALNDIKCVEKL 768
           VLL EI+S        +G   Y  +T          +L + +     +E   +  C +++
Sbjct: 229 VLLWEIVS--------LGGTPYCGMT--------CAELYEKLPQGYRLEKPLN--CDDEV 270

Query: 769 --VMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             +M   W  +E P  RP+  ++L  L  ++E
Sbjct: 271 YDLMRQCW--REKPYERPSFAQILVSLNRMLE 300

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  132 bits (335), Expect = 2e-34
 Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 65/313 (20%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHK 579
             + +G G FG V K     L  R   T VAVK L       E  +  +E  V+ Q +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR------------------ 621
           ++++L G C +    LL+ E+   G+L  FL  + K                        
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 622 ------TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
                  + A+QI++G+ YL      +++H D+  +NIL+ +    +ISDFGL++ +   
Sbjct: 147 LTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203

Query: 676 QSKAIRTAIRGTKGYV-----APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
                 + ++ ++G +     A E   +   T + DV+SFGVLL EI++        +G 
Sbjct: 204 D-----SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------LGG 250

Query: 731 E-YAILTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPT 785
             Y  +          E+L +L++    ME  ++  C E++  +M+  W  +++P  RP 
Sbjct: 251 NPYPGIP--------PERLFNLLKTGHRMERPDN--CSEEMYRLMLQCW--KQEPDKRPV 298

Query: 786 MKKVLQMLEGVVE 798
              + + LE ++ 
Sbjct: 299 FADISKDLEKMMV 311

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  133 bits (337), Expect = 2e-34
 Identities = 57/284 (20%), Positives = 117/284 (41%), Gaps = 42/284 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIG--QTHHKN 580
           +++G G    V++ +    +      A+K ++    D +    ++NE+  +   Q H   
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQI----YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
           ++RL  +    Q   +V E   N  L S+L    ++ P    R +    +   +  +H+ 
Sbjct: 71  IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERKSYWKNMLEAVHTIHQ- 126

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---- 694
               I+H D+KP N L+ D    ++ DFG+A  +  + +  ++ +  GT  Y+ PE    
Sbjct: 127 --HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183

Query: 695 -------WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
                      S I+ K DV+S G +L  +   +  F  ++  + + L       +  E 
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAIIDPNHEIEF 242

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            D     + +  + +K           C++ DP  R ++ ++L 
Sbjct: 243 PDIP---EKDLQDVLK----------CCLKRDPKQRISIPELLA 273

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  134 bits (339), Expect = 3e-34
 Identities = 54/284 (19%), Positives = 118/284 (41%), Gaps = 42/284 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNL- 581
           +++G G    V++ +    +      A+K ++    D +    ++NE+  + +    +  
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQI----YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117

Query: 582 -VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHED 638
            +RL  +    Q   +V E   N  L S+L    ++ P    R +    +   +  +H+ 
Sbjct: 118 IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERKSYWKNMLEAVHTIHQ- 173

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
               I+H D+KP N L+ D    ++ DFG+A  +  + +  ++ +  G   Y+ PE  ++
Sbjct: 174 --HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230

Query: 699 ST-----------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
            +           I+ K DV+S G +L  +   +  F  ++  + + L       +  E 
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-QIINQISKLHAIIDPNHEIEF 289

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            D     + +  + +KC          C++ DP  R ++ ++L 
Sbjct: 290 PDIP---EKDLQDVLKC----------CLKRDPKQRISIPELLA 320

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  132 bits (335), Expect = 4e-34
 Identities = 67/313 (21%), Positives = 129/313 (41%), Gaps = 65/313 (20%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQTHHK 579
           +  ++G G+FG V++     L      T VAVK L        + +F+ E  ++ +  + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN---------------- 623
           N+V+LLG C  G+   L++E++  G L  FL      +    ++                
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 624 --------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
                   IA Q+A G+ YL      + +H D+  +N L+ +    +I+DFGL++   + 
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR--NIY 225

Query: 676 QSKAIRTAIRGTKGYV-----APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE 730
            +   +         +      PE    +  T + DV+++GV+L EI S         G 
Sbjct: 226 SADYYK---ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS--------YGL 274

Query: 731 E-YAILTDWAFDCYRNEKLDDLVE--GDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPT 785
           + Y  +         +E++   V     +    +  C  +L  +M   W   + P+ RP+
Sbjct: 275 QPYYGMA--------HEEVIYYVRDGNILACPEN--CPLELYNLMRLCW--SKLPADRPS 322

Query: 786 MKKVLQMLEGVVE 798
              + ++L+ + E
Sbjct: 323 FCSIHRILQRMCE 335

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  132 bits (333), Expect = 8e-34
 Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 73/358 (20%)

Query: 488 FIYKKKWIRNSPGDGTIETNLPCFSYKELEEATD--------NFKEEVGRGSFGIVYKGV 539
           F Y+ +  +     G+ +       ++E E             F + +G G+FG V    
Sbjct: 7   FRYESQL-QMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNAT 65

Query: 540 I--LTTRTSTTAVAVKKLDRVFQDGEK-EFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRL 595
              ++    +  VAVK L       E+    +E+ ++ Q   H+N+V LLG C       
Sbjct: 66  AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY 125

Query: 596 LVYEFLNNGTLASFLFGNLKPSWNLRTN-----------------------IAFQIARGL 632
           L++E+   G L ++L    +                                A+Q+A+G+
Sbjct: 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV- 691
            +L        +H D+  +N+L+      +I DFGLA+   +                + 
Sbjct: 186 EFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARD--IMSDSNYV---VRGNARLP 237

Query: 692 ----APEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEE-YAILTDWAFDCYR 744
               APE       T K DV+S+G+LL EI S   +    I +    Y ++ +     ++
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG----FK 293

Query: 745 NEKLDDLVEGDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
            ++                  E++  +M S W    D   RP+   +   L   +  +
Sbjct: 294 MDQPFY-------------ATEEIYIIMQSCW--AFDSRKRPSFPNLTSFLGCQLADA 336

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  130 bits (328), Expect = 1e-33
 Identities = 58/295 (19%), Positives = 108/295 (36%), Gaps = 60/295 (20%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQ-THHKNL 581
           E++G G FG V+K V           A+K+  +       E+    EV        H ++
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGC---IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV 73

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYLHE 637
           VR      E  + L+  E+ N G+LA  +  N +     +     ++  Q+ RGL Y+H 
Sbjct: 74  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH- 132

Query: 638 DCSAQIIHCDIKPQNILLD-------------------DYYNARISDFGLAKLLTLNQSK 678
             S  ++H DIKP NI +                    +    +I D G    ++  Q +
Sbjct: 133 --SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE 190

Query: 679 AIRTAIRGTKGYVAPE-WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 737
                  G   ++A E    N T   K D+++  + ++             G+++  +  
Sbjct: 191 ------EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR--NGDQWHEI-- 240

Query: 738 WAFDCYRNEKLDDLVEGDMEALND-IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                 R  +L  + +   +   + +K            I  DP  RP+   +++
Sbjct: 241 ------RQGRLPRIPQVLSQEFTELLK----------VMIHPDPERRPSAMALVK 279

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  130 bits (329), Expect = 1e-33
 Identities = 65/296 (21%), Positives = 107/296 (36%), Gaps = 50/296 (16%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           F +++G G F  V     L         A+K++    Q   +E + E  +    +H N++
Sbjct: 33  FIQKLGEGGFSYVDLVEGLHDGHF---YALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 583 RLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLRT----NIAFQIARGLLY 634
           RL+ +C   +       L+  F   GTL + +         L       +   I RGL  
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL---NQSKAIRT----AIRGT 687
           +H   +    H D+KP NILL D     + D G      +      +A+      A R T
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 688 KGYVAPEWF---RNSTITAKVDVYSFGVLLLEIISCRKSFD--IEMGEEY--AILTDWAF 740
             Y APE F    +  I  + DV+S G +L  ++     +D   + G+    A+    + 
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266

Query: 741 --DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                 +  L  L+                       +  DP  RP +  +L  LE
Sbjct: 267 PQSPRHSSALWQLLN--------------------SMMTVDPHQRPHIPLLLSQLE 302

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  130 bits (329), Expect = 2e-33
 Identities = 60/199 (30%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           +  VGRGSFG V++     T       AVKK+    +    E   E+V         +V 
Sbjct: 63  QPRVGRGSFGEVHRMKDKQTGFQ---CAVKKVR--LEVFRVE---ELVACAGLSSPRIVP 114

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           L G   EG    +  E L  G+L   +   G L            Q   GL YLH   + 
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED--RALYYLGQALEGLEYLH---TR 169

Query: 642 QIIHCDIKPQNILLDDY-YNARISDFGLAKLLT---LNQSKAIRTAIRGTKGYVAPEWFR 697
           +I+H D+K  N+LL      A + DFG A  L    L +S      I GT+ ++APE   
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229

Query: 698 NSTITAKVDVYSFGVLLLE 716
                AKVD++S   ++L 
Sbjct: 230 GKPCDAKVDIWSSCCMMLH 248

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  129 bits (326), Expect = 4e-33
 Identities = 63/274 (22%), Positives = 99/274 (36%), Gaps = 37/274 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQ-THHKNL 581
             +G GS+G V+K     ++      AVK+    F+          EV    +   H   
Sbjct: 63  SRLGHGSYGEVFKVR---SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC 119

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           VRL    +EG    L  E     +L      +G   P   +           L +LH   
Sbjct: 120 VRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVW-GYLRDTLLALAHLH--- 174

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S  ++H D+KP NI L      ++ DFGL   L    +        G   Y+APE  + S
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPELLQGS 231

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM-EA 758
                 DV+S G+ +LE+    +      GE +  L        R   L       +   
Sbjct: 232 -YGTAADVFSLGLTILEVACNMELPH--GGEGWQQL--------RQGYLPPEFTAGLSSE 280

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM 792
           L        +++     ++ DP LR T + +L +
Sbjct: 281 LRS------VLV---MMLEPDPKLRATAEALLAL 305

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  130 bits (327), Expect = 6e-33
 Identities = 41/261 (15%), Positives = 79/261 (30%), Gaps = 24/261 (9%)

Query: 495 IRNSPGDGTIETNLPCFS-YKELEEATDNF--KEEVGRGSFGIVYKGVILTTRTSTTA-- 549
           + + P     +  LP      E +  +        +G G+F  VY+        +     
Sbjct: 38  VSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQK 97

Query: 550 VAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASF 609
             +K                +  +  +     ++           +LV E  + GTL + 
Sbjct: 98  FVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNA 157

Query: 610 LFGNLKPSW-----NLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA--- 661
           +              L  + A ++   +  +H     +IIH DIKP N +L + +     
Sbjct: 158 INLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214

Query: 662 --------RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVL 713
                    + D G +  + L     I TA   T G+   E   N     ++D +     
Sbjct: 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAAT 274

Query: 714 LLEIISCRKSFDIEMGEEYAI 734
           +  ++          G E   
Sbjct: 275 VYCMLFGTYMKVKNEGGECKP 295

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  127 bits (321), Expect = 3e-32
 Identities = 62/318 (19%), Positives = 113/318 (35%), Gaps = 57/318 (17%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLV 582
           +  +  G F  VY+   + +       A+K+L    ++  +    EV  + + + H N+V
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGRE---YALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89

Query: 583 RLLGFC-------DEGQNRLLVYEFLNNGTLASFLF-----GNLKPSWNLRTNIAFQIAR 630
           +            D GQ   L+   L  G L  FL      G L     L+  I +Q  R
Sbjct: 90  QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK--IFYQTCR 147

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR----- 685
            + ++H      IIH D+K +N+LL +    ++ DFG A  ++     +     R     
Sbjct: 148 AVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206

Query: 686 -----GTKGYVAPE---WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT- 736
                 T  Y  PE    + N  I  K D+++ G +L  +   +  F  E G +  I+  
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF--EDGAKLRIVNG 264

Query: 737 --DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                    +      L+                       +Q +P  R ++ +V+  L+
Sbjct: 265 KYSIPPHDTQYTVFHSLIR--------------------AMLQVNPEERLSIAEVVHQLQ 304

Query: 795 GVVEVSLPPNPYPFSSSM 812
            +          P +  +
Sbjct: 305 EIAAARNVNPKSPITELL 322

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  125 bits (317), Expect = 5e-32
 Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 18/208 (8%)

Query: 525 EEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKN 580
           +++G G    VY     +        VA+K +    ++ E   K F+ EV    Q  H+N
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIK----VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +V ++   +E     LV E++   TL+ ++  +   S +   N   QI  G+ + H+   
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD--- 129

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLL---TLNQSKAIRTAIRGTKGYVAPEWFR 697
            +I+H DIKPQNIL+D     +I DFG+AK L   +L Q+      + GT  Y +PE  +
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT----NHVLGTVQYFSPEQAK 185

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSFD 725
                   D+YS G++L E++     F+
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFN 213

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  125 bits (317), Expect = 8e-32
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
            ++G GS GIV       +      VAVK +D   Q   +   NEVV++    H N+V +
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQ---VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM 107

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
                 G+   ++ EFL  G L   +    L         IA     + + L YLH   +
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ-----IATVCEAVLQALAYLH---A 159

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH DIK  +ILL      ++SDFG    ++ +  K  R ++ GT  ++APE    S 
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSL 217

Query: 701 ITAKVDVYSFGVLLLEII 718
              +VD++S G++++E++
Sbjct: 218 YATEVDIWSLGIMVIEMV 235

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  124 bits (313), Expect = 1e-31
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 17/198 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAF---QIARGLLYLHEDCS 640
           L     G    +V E+L  G+L   +    +         IA    +  + L +LH   S
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ-----IAAVCRECLQALEFLH---S 134

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            Q+IH DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE      
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKA 192

Query: 701 ITAKVDVYSFGVLLLEII 718
              KVD++S G++ +E+I
Sbjct: 193 YGPKVDIWSLGIMAIEMI 210

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  123 bits (310), Expect = 5e-31
 Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 29/217 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
              + +G+G+   V++G    T       A+K  + +      +    E  V+ + +HKN
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGDL---FAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 581 LVRLLGFCDEGQNRL--LVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLY 634
           +V+L    +E   R   L+ EF   G+L + L      ++ L  +        +  G+ +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGMNH 127

Query: 635 LHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           L       I+H +IKP NI+     D     +++DFG A+ L     +   +   GT+ Y
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLY-GTEEY 181

Query: 691 VAPEWFRNSTI--------TAKVDVYSFGVLLLEIIS 719
           + P+ +  + +         A VD++S GV      +
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  121 bits (307), Expect = 1e-30
 Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 525 EEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKN 580
           E +G G    V+    +   R     VAVK L             F+ E       +H  
Sbjct: 18  EILGFGGMSEVHLARDLRDHRD----VAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73

Query: 581 LVRLL--GFCDEGQNRLLVY---EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           +V +   G   E     L Y   E+++  TL   +      +      +     + L + 
Sbjct: 74  IVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPE 694
           H+     IIH D+KP NI++      ++ DFG+A+ +  + +   +T A+ GT  Y++PE
Sbjct: 133 HQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
             R  ++ A+ DVYS G +L E+++    F 
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  123 bits (309), Expect = 3e-30
 Identities = 58/308 (18%), Positives = 114/308 (37%), Gaps = 41/308 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKN 580
              + +G+G+   V++G    T       A+K  + +      +    E  V+ + +HKN
Sbjct: 12  LLSDILGQGATANVFRGRHKKTGDL---FAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 581 LVRLLGFCDEGQNRL--LVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLY 634
           +V+L    +E   R   L+ EF   G+L + L      ++ L  +        +  G+ +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGMNH 127

Query: 635 LHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           L       I+H +IKP NI+     D     +++DFG A+ L     +   +   GT+ Y
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLY-GTEEY 181

Query: 691 VAPEWFRNSTI--------TAKVDVYSFGVLLLEIISCRKSFDIEMGEE------YAILT 736
           + P+ +  + +         A VD++S GV      +    F    G        Y I+T
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

Query: 737 ----DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIW--CIQEDPSLRPTMKKVL 790
                      + E       GDM     +    ++++  +    ++ D        +  
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF 301

Query: 791 QMLEGVVE 798
                ++ 
Sbjct: 302 AETSDILH 309

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  118 bits (298), Expect = 1e-29
 Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 21/198 (10%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDG-EKEFKNEVVVIGQTHHKNLVRL 584
           G+G FG VY      ++     +A+K L +  + + G E + + EV +     H N++RL
Sbjct: 18  GKGKFGNVYLAREKQSKFI---LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCS 640
            G+  +     L+ E+   GT+    +  L+               ++A  L Y H   S
Sbjct: 75  YGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCH---S 127

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            ++IH DIKP+N+LL      +I+DFG +     ++    RT + GT  Y+ PE      
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRM 183

Query: 701 ITAKVDVYSFGVLLLEII 718
              KVD++S GVL  E +
Sbjct: 184 HDEKVDLWSLGVLCYEFL 201

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  118 bits (298), Expect = 2e-29
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 34/207 (16%)

Query: 599 EFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL 655
           +      L  ++            +  +I  QIA  + +LH   S  ++H D+KP NI  
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFF 197

Query: 656 DDYYNARISDFGLAKLLTLNQSKA----------IRTAIRGTKGYVAPEWFRNSTITAKV 705
                 ++ DFGL   +  ++ +             T   GTK Y++PE    +  + KV
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257

Query: 706 DVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCV 765
           D++S G++L E++    SF  +M               R   + D+       L   K  
Sbjct: 258 DIFSLGLILFELLY---SFSTQM--------------ERVRIITDVRNLKFPLLFTQKYP 300

Query: 766 EKLVMVSIWCIQEDPSLRPTMKKVLQM 792
           ++ +MV    +   P+ RP    +++ 
Sbjct: 301 QEHMMVQ-DMLSPSPTERPEATDIIEN 326

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  119 bits (300), Expect = 3e-29
 Identities = 43/316 (13%), Positives = 91/316 (28%), Gaps = 84/316 (26%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFKNEVVVIGQ------ 575
             +G+       +     T  S     V      +R   +  K+ K EV+ +        
Sbjct: 79  TVLGQEDPYAYLEATDQETGES---FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN 135

Query: 576 -------------------THHKNLVRLLGFCDEGQ--NRLLVYEFLNN------GTLAS 608
                                 K ++R+     +    +R  +Y  + +        L S
Sbjct: 136 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS 195

Query: 609 FLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL 668
               +     + R  +  Q+ R L  LH      ++H  ++P +I+LD      ++ F  
Sbjct: 196 HSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEH 252

Query: 669 AKLLTLNQSKAIRTAIRGTKGYVAPEWF-----------RNSTITAKVDVYSFGVLLLEI 717
                       R     ++G+  PE             R + +T   D ++ G+++   
Sbjct: 253 LVRDGA------RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI--- 303

Query: 718 ISCRKSFDIEMGEEYAILT-DWAFDCYRNEKLDDLVEGDMEALNDI-KCVEKLVMVSIWC 775
                         Y I   D        +      E    +  +I + V  L+      
Sbjct: 304 --------------YWIWCADLPIT---KDAALGGSEWIFRSCKNIPQPVRALLE---GF 343

Query: 776 IQEDPSLRPTMKKVLQ 791
           ++     R    + ++
Sbjct: 344 LRYPKEDRLLPLQAME 359

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  118 bits (298), Expect = 3e-29
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 17/199 (8%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQ-THHKN 580
            +E+GRG F +V +     ++++    A K  K  R  QD   E  +E+ V+        
Sbjct: 34  SKELGRGKFAVVRQC---ISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR 90

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLHED 638
           ++ L    +     +L+ E+   G + S     L    +      +  QI  G+ YLH  
Sbjct: 91  VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH-- 148

Query: 639 CSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
               I+H D+KPQNILL       + +I DFG+++   +  +  +R  + GT  Y+APE 
Sbjct: 149 -QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHACELREIM-GTPEYLAPEI 204

Query: 696 FRNSTITAKVDVYSFGVLL 714
                IT   D+++ G++ 
Sbjct: 205 LNYDPITTATDMWNIGIIA 223

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  119 bits (299), Expect = 3e-29
 Identities = 31/308 (10%), Positives = 72/308 (23%), Gaps = 60/308 (19%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHK 579
             E +  G   +V+    +         A+K         +   +          +   +
Sbjct: 66  LVEPLRVGDRSVVFLVRDVERLED---FALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 580 NLV------RLLGFCDEGQ--------------------NRLLVYEFLNNGTLASFL--- 610
           +        RLL   D                       N LL+    +   L       
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL 181

Query: 611 ----FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF 666
                            +  Q+ R    L    S  ++H    P N+ +       + D 
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDV 238

Query: 667 GLAKLLTLNQSKAIRTAIRGTKGYVAPEWF--RNSTITAKVDVYSFGVLLLEIISCRKSF 724
                +          A      Y   E+     +T T  ++ +  G+ +  +      F
Sbjct: 239 SALWKVG-----TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293

Query: 725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM-EALNDIKCVEKLVMVSIWCIQEDPSLR 783
            +            +      + L       + + +  +  + +        +  D   R
Sbjct: 294 GLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTL--IGRF-------LNFDRRRR 344

Query: 784 PTMKKVLQ 791
               + ++
Sbjct: 345 LLPLEAME 352

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  117 bits (295), Expect = 4e-29
 Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 24/211 (11%)

Query: 525 EEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKL------DRVFQDGEKEFKNEVVVIGQTH 577
             VGRG  G VY+    +  R     VA+K +      D VF+      + E    G+  
Sbjct: 40  RLVGRGGMGDVYEAEDTVRERI----VALKLMSETLSSDPVFR---TRMQREARTAGRLQ 92

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYL 635
             ++V +  F +      +    +N   LA+ L   G L P   +   I  QI   L   
Sbjct: 93  EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVA--IVRQIGSALDAA 150

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVAPE 694
           H    A   H D+KP+NIL+     A + DFG+A        K  +     GT  Y+APE
Sbjct: 151 HA---AGATHRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYMAPE 205

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
            F  S  T + D+Y+   +L E ++    + 
Sbjct: 206 RFSESHATYRADIYALTCVLYECLTGSPPYQ 236

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  122 bits (307), Expect = 5e-29
 Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 24/211 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNL 581
            KE +G G FG V + +   T      VA+K+  +      +E +  E+ ++ + +H N+
Sbjct: 18  MKERLGTGGFGYVLRWIHQDTGEQ---VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 582 VRLLGFCDEGQN------RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARG 631
           V      D  Q        LL  E+   G L  +L    +    L+          I+  
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRTLLSDISSA 133

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
           L YLHE    +IIH D+KP+NI+L         +I D G AK L   Q +     + GT 
Sbjct: 134 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFV-GTL 187

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
            Y+APE       T  VD +SFG L  E I+
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  116 bits (293), Expect = 7e-29
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 18/199 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E++G+GSFG V+KG+   T+     VA+K +D    +D  ++ + E+ V+ Q     + +
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKV---VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFL-FGNLKPSWNLRTNIAF---QIARGLLYLHEDC 639
             G   +     ++ E+L  G+    L  G L  +      IA    +I +GL YLH   
Sbjct: 85  YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ-----IATILREILKGLDYLH--- 136

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
           S + IH DIK  N+LL ++   +++DFG+A  LT  Q K  R    GT  ++APE  + S
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQS 194

Query: 700 TITAKVDVYSFGVLLLEII 718
              +K D++S G+  +E+ 
Sbjct: 195 AYDSKADIWSLGITAIELA 213

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  116 bits (292), Expect = 7e-29
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDG-EKEFKNEVVVIGQTHHKNLVRL 584
           G+G FG VY       +     +A+K L +  + ++G E + + E+ +     H N++R+
Sbjct: 23  GKGKFGNVYLAREKQNKFI---MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCS 640
             +  + +   L+ EF   G L    +  L+         +     ++A  L Y H    
Sbjct: 80  YNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHYCH---E 132

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            ++IH DIKP+N+L+      +I+DFG +       S   RT   GT  Y+ PE     T
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRTMC-GTLDYLPPEMIEGKT 188

Query: 701 ITAKVDVYSFGVLLLE 716
              KVD++  GVL  E
Sbjct: 189 HDEKVDLWCAGVLCYE 204

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  121 bits (305), Expect = 1e-28
 Identities = 55/297 (18%), Positives = 101/297 (34%), Gaps = 58/297 (19%)

Query: 525 EEVGRGSFGIVYKGV--ILTTRTSTTAVAVKKL----DRVFQDGEKEFKNEVVVIGQTHH 578
             +  G  G +Y  +   +  R     V +K L    D   Q        E   + +  H
Sbjct: 86  GCIAHGGLGWIYLALDRNVNGRP----VVLKGLVHSGDAEAQ---AMAMAERQFLAEVVH 138

Query: 579 KNLVRLLGFCDEGQNRL-----LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            ++V++  F +           +V E++   +L       L  +  +      +I   L 
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALS 196

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKGYVA 692
           YLH      +++ D+KP+NI+L +    ++ D G    +            + GT G+ A
Sbjct: 197 YLHS---IGLVYNDLKPENIMLTE-EQLKLIDLGAVSRIN-------SFGYLYGTPGFQA 245

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE  R    T   D+Y+ G  L  +     + +   G     L +        +    L+
Sbjct: 246 PEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN---GRYVDGLPEDDPVLKTYDSYGRLL 301

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGVV-EVSLPPNPYP 807
                     + ++            DP  R  T +++   L GV+ EV       P
Sbjct: 302 R---------RAIDP-----------DPRQRFTTAEEMSAQLTGVLREVVAQDTGVP 338

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  116 bits (292), Expect = 1e-28
 Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 23/201 (11%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
              E++GRG FGIV++       +S      K +     D +   K E+ ++    H+N+
Sbjct: 8   MIAEDLGRGEFGIVHRC---VETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNI 63

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL------ASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           + L    +  +  ++++EF++   +      ++F     +    +      Q+   L +L
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH-----QVCEALQFL 118

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNA--RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           H   S  I H DI+P+NI+     ++  +I +FG A+   L      R        Y AP
Sbjct: 119 H---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ--LKPGDNFRLLF-TAPEYYAP 172

Query: 694 EWFRNSTITAKVDVYSFGVLL 714
           E  ++  ++   D++S G L+
Sbjct: 173 EVHQHDVVSTATDMWSLGTLV 193

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  116 bits (292), Expect = 1e-28
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 27/207 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKE-FKNEVVVIGQ 575
           +  EE+G G F IV K      +++    A K     +     +   +E  + EV ++ Q
Sbjct: 15  DIGEELGSGQFAIVKKC---REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARG 631
             H N++ L    +   + +L+ E ++ G L    F  L    +L     T+   QI  G
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDG 127

Query: 632 LLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           + YLH   + +I H D+KP+NI+L        + ++ DFGLA  +        +    GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIF-GT 181

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLL 714
             +VAPE      +  + D++S GV+ 
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVIT 208

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  117 bits (294), Expect = 2e-28
 Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           +  EE+G G+FG+V++      + +      K ++  +   +   KNE+ ++ Q HH  L
Sbjct: 54  DILEELGSGAFGVVHRC---VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-----NIAFQIARGLLYLH 636
           + L    ++    +L+ EFL+ G     LF  +       +     N   Q   GL ++H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNAR--ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
                 I+H DIKP+NI+ +    +   I DFGLA    LN  + ++     T  + APE
Sbjct: 167 ---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATK--LNPDEIVKVTT-ATAEFAAPE 220

Query: 695 WFRNSTITAKVDVYSFGVLL 714
                 +    D+++ GVL 
Sbjct: 221 IVDREPVGFYTDMWAIGVLG 240

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  116 bits (293), Expect = 2e-28
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 30/235 (12%)

Query: 496 RNSPGDGTIETNLPCFSYKELEEATDNF--------KEEVGRGSFGIVYKGVILTTRTST 547
           R S     I      F ++ +                E +G G FG V+K        + 
Sbjct: 58  RTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKC---EETATG 114

Query: 548 TAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL- 606
             +A K +       ++E KNE+ V+ Q  H NL++L    +   + +LV E+++ G L 
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174

Query: 607 -----ASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA 661
                 S+    L            QI  G+ ++H      I+H D+KP+NIL  +    
Sbjct: 175 DRIIDESYNLTELDTI-----LFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAK 226

Query: 662 RI--SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
           +I   DFGLA+       + ++    GT  ++APE      ++   D++S GV+ 
Sbjct: 227 QIKIIDFGLARR--YKPREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  115 bits (289), Expect = 3e-28
 Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 17/198 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G GS+G VYK +   T      VA+K++    +   +E   E+ ++ Q    ++V+ 
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQI---VAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKY 89

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAF---QIARGLLYLHEDCS 640
            G   +  +  +V E+   G+++  +    K    L    IA       +GL YLH    
Sbjct: 90  YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLH---F 143

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            + IH DIK  NILL+   +A+++DFG+A  LT   +K  R  + GT  ++APE  +   
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEIG 201

Query: 701 ITAKVDVYSFGVLLLEII 718
                D++S G+  +E+ 
Sbjct: 202 YNCVADIWSLGITAIEMA 219

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  115 bits (291), Expect = 4e-28
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 27/207 (13%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKE-FKNEVVVIGQ 575
           +  EE+G G F IV K      +++    A K     +     +   +E  + EV ++ Q
Sbjct: 15  DIGEELGSGQFAIVKKC---REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARG 631
             H N++ L    +   + +L+ E ++ G L    F  L    +L     T+   QI  G
Sbjct: 72  VLHPNIITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDG 127

Query: 632 LLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           + YLH   + +I H D+KP+NI+L        + ++ DFGLA  +        +    GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIF-GT 181

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLL 714
             +VAPE      +  + D++S GV+ 
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  114 bits (287), Expect = 4e-28
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 20/203 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
            E+G G+FG VYK     T       A K ++   ++  +++  E+ ++    H  +V+L
Sbjct: 25  GELGDGAFGKVYKAKNKETGAL---AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR-TNIAF---QIARGLLYLHEDCS 640
           LG         ++ EF   G + + +    +    L    I     Q+   L +LH   S
Sbjct: 82  LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLH---S 135

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-----W 695
            +IIH D+K  N+L+    + R++DFG++        K  R +  GT  ++APE      
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCET 193

Query: 696 FRNSTITAKVDVYSFGVLLLEII 718
            +++    K D++S G+ L+E+ 
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMA 216

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  113 bits (285), Expect = 5e-28
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 18/194 (9%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDG-EKEFKNEVVVIGQTHHKNLVRL 584
           G+GSF  VY+     +  +   VA+K +D+  +++ G  +  +NEV +  Q  H +++ L
Sbjct: 20  GKGSFAGVYRA---ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA----FQIARGLLYLHEDCS 640
             + ++     LV E  +NG +  +L   +KP      N A     QI  G+LYLH   S
Sbjct: 77  YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYLH---S 130

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             I+H D+   N+LL    N +I+DFGLA  L +   K     + GT  Y++PE    S 
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSA 188

Query: 701 ITAKVDVYSFGVLL 714
              + DV+S G + 
Sbjct: 189 HGLESDVWSLGCMF 202

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  113 bits (285), Expect = 6e-28
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKE-FKNEVVVIGQ 575
              EE+G G F IV K      + +    A K     +L    +   +E  + EV ++ +
Sbjct: 8   EMGEELGSGQFAIVRKC---RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             H N++ L    +   + +L+ E ++ G L  FL      + +  T    QI  G+ YL
Sbjct: 65  IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124

Query: 636 HEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           H   S +I H D+KP+NI+L          ++ DFG+A  +        +    GT  +V
Sbjct: 125 H---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIF-GTPEFV 178

Query: 692 APEWFRNSTITAKVDVYSFGVLL 714
           APE      +  + D++S GV+ 
Sbjct: 179 APEIVNYEPLGLEADMWSIGVIT 201

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  113 bits (284), Expect = 8e-28
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 25/208 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---------VFQDGEKEFKNEVVVI 573
            KE +GRG   +V +      + +    AVK +D            Q+  +    EV ++
Sbjct: 21  PKEILGRGVSSVVRRC---IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77

Query: 574 GQ-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
            + + H N+++L    +      LV++ +  G L  +L   +  S      I   +   +
Sbjct: 78  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
             LH      I+H D+KP+NILLDD  N +++DFG +    L+  + +R    GT  Y+A
Sbjct: 138 CALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKLREVC-GTPSYLA 191

Query: 693 PEWFRNSTITA------KVDVYSFGVLL 714
           PE    S          +VD++S GV++
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  117 bits (294), Expect = 2e-27
 Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 20/200 (10%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
           +  EE+G G+FG+V++    T R +    A K +    +  ++  + E+  +    H  L
Sbjct: 160 DIHEELGTGAFGVVHRV---TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT-----NIAFQIARGLLYLH 636
           V L    ++    +++YEF++ G L    F  +    N  +         Q+ +GL ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARI--SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
                  +H D+KP+NI+     +  +   DFGL   L  +  ++++    GT  + APE
Sbjct: 273 ---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--DPKQSVKVTT-GTAEFAAPE 326

Query: 695 WFRNSTITAKVDVYSFGVLL 714
                 +    D++S GVL 
Sbjct: 327 VAEGKPVGYYTDMWSVGVLS 346

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  116 bits (292), Expect = 2e-27
 Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 34/277 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKN 580
             +++G G++G V        + +    A+K +    V      +   EV V+    H N
Sbjct: 41  RVKKLGSGAYGEVLLC---RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +++L  F ++ +N  LV E    G L   +   +K +      I  Q+  G+ YLH    
Sbjct: 98  IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---K 154

Query: 641 AQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
             I+H D+KP+N+LL   +     +I DFGL+ +      K ++  + GT  Y+APE  R
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV--FENQKKMKERL-GTAYYIAPEVLR 211

Query: 698 NSTITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILT-DWAFDCYRNEKLDDLVEG 754
                 K DV+S GV+L  +++    F    +      +    + FD    + + +    
Sbjct: 212 KK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE---- 266

Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              A + IK            +Q D   R + ++ L+
Sbjct: 267 --GAKDLIKQ----------MLQFDSQRRISAQQALE 291

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  113 bits (285), Expect = 2e-27
 Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 38/214 (17%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR-----------------VFQDGEKEFKNEV 570
            +G F  +               A+KK ++                   +    +FKNE+
Sbjct: 40  NQGKFNKIILC-----EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNEL 94

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRT------ 622
            +I    ++  +   G         ++YE++ N ++  F   F  L  ++          
Sbjct: 95  QIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK 154

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
            I   +     Y+H      I H D+KP NIL+D     ++SDFG ++ +     K I+ 
Sbjct: 155 CIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYM---VDKKIKG 209

Query: 683 AIRGTKGYVAPEWFRNSTIT--AKVDVYSFGVLL 714
           + RGT  ++ PE+F N +    AKVD++S G+ L
Sbjct: 210 S-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  115 bits (290), Expect = 2e-27
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 35/279 (12%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHH 578
             +  +G+GSFG V        + +    AVK + +     +  ++    EV ++ Q  H
Sbjct: 29  KGQRVLGKGSFGEVILC---KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
            N+++L  F ++     LV E    G L   +    + S      I  Q+  G+ Y+H  
Sbjct: 86  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH-- 143

Query: 639 CSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
              +I+H D+KP+N+LL       N RI DFGL+       SK ++  I GT  Y+APE 
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH--FEASKKMKDKI-GTAYYIAPEV 199

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLV 752
              +    K DV+S GV+L  ++S    F+     +    +    + F+  + +K+ +  
Sbjct: 200 LHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE-- 256

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                A + I+            +   PS+R + +  L 
Sbjct: 257 ----SAKDLIRK----------MLTYVPSMRISARDALD 281

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  111 bits (281), Expect = 3e-27
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 41/210 (19%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F E +G G+F  V+       R +    A+K + +     +   +NE+ V+ +  H+N+
Sbjct: 12  IFMEVLGSGAFSEVFLV---KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAFQ 627
           V L    +   +  LV + ++ G L              AS +                Q
Sbjct: 69  VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI--------------QQ 114

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           +   + YLH      I+H D+KP+N+L    ++     I+DFGL+K+    Q+  + TA 
Sbjct: 115 VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME---QNGIMSTAC 168

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
            GT GYVAPE       +  VD +S GV+ 
Sbjct: 169 -GTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  112 bits (283), Expect = 3e-27
 Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 20/204 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKEFKNEVVVIGQTH 577
             E +G+G F +V +      R +    AVK     K         ++ K E  +     
Sbjct: 28  LCEVIGKGPFSVVRRC---INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLL 633
           H ++V LL          +V+EF++   L   +       +       ++   QI   L 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144

Query: 634 YLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           Y H      IIH D+KP  +LL   ++    ++  FG+A  L  +        + GT  +
Sbjct: 145 YCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRV-GTPHF 199

Query: 691 VAPEWFRNSTITAKVDVYSFGVLL 714
           +APE  +       VDV+  GV+L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVIL 223

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  111 bits (280), Expect = 8e-27
 Identities = 59/336 (17%), Positives = 132/336 (39%), Gaps = 56/336 (16%)

Query: 491 KKKWIRNSPGDGTIETNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAV 550
            ++  +      T +  +      + E+       E+G G+ G+V+K      + S   +
Sbjct: 10  DEQQRKRLEAFLTQKQKVGELKDDDFEKI-----SELGAGNGGVVFKVSH---KPSGLVM 61

Query: 551 AVKKLDRVFQDGE-KEFKNEVVVIGQTHHKNLVRLLG-FCDEGQNRLLVY---EFLNNGT 605
           A K +    +     +   E+ V+ + +   +V   G F  +G+    +    E ++ G+
Sbjct: 62  ARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE----ISICMEHMDGGS 117

Query: 606 LASFL-FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS 664
           L   L      P   L   ++  + +GL YL E    +I+H D+KP NIL++     ++ 
Sbjct: 118 LDQVLKKAGRIPEQILGK-VSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLC 174

Query: 665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF 724
           DFG++  L    S A  + + GT+ Y++PE  + +  + + D++S G+ L+E+   R  +
Sbjct: 175 DFGVSGQLI--DSMA-NSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR--Y 228

Query: 725 DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIW---------- 774
            I   +   +   +      +               +   ++    ++I+          
Sbjct: 229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP 288

Query: 775 -------------------CIQEDPSLRPTMKKVLQ 791
                              C+ ++P+ R  +K+++ 
Sbjct: 289 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  109 bits (276), Expect = 8e-27
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 42/212 (19%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHK 579
           + KEE+G+G+F +V +      +T+    A K ++  ++     ++ + E  +  +  H 
Sbjct: 9   DVKEELGKGAFSVVRRC---VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIA 625
           N+VRL     E     LV++ +  G L              AS                 
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI-------------- 111

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRT 682
            QI   + Y H   S  I+H ++KP+N+LL         +++DFGLA  +  N S+A   
Sbjct: 112 QQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHG 166

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
              GT GY++PE  +    +  VD+++ GV+L
Sbjct: 167 FA-GTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  111 bits (279), Expect = 8e-27
 Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 19/203 (9%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKE-FKNEVVVIGQ 575
           +  EE+G G F +V K      +++    A K     +     +   +E  + EV ++ +
Sbjct: 14  DTGEELGSGQFAVVKKC---REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             H N++ L    +   + +L+ E +  G L  FL      +    T    QI  G+ YL
Sbjct: 71  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 130

Query: 636 HEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           H   S QI H D+KP+NI+L          +I DFGLA  +  +     +    GT  +V
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF-GTPEFV 184

Query: 692 APEWFRNSTITAKVDVYSFGVLL 714
           APE      +  + D++S GV+ 
Sbjct: 185 APEIVNYEPLGLEADMWSIGVIT 207

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  110 bits (278), Expect = 9e-27
 Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 33/213 (15%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVR 583
           E VG G++G VYKG  + T       A+K +D V  D E+E K E+ ++ +  HH+N+  
Sbjct: 30  ELVGNGTYGQVYKGRHVKTGQL---AAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIAT 85

Query: 584 LLG-----FCDEGQNRL-LVYEFLNNGTLA----SFLFGNLKPSWNLRTNIAF---QIAR 630
             G           ++L LV EF   G++     +     LK  W     IA+   +I R
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILR 140

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           GL +LH     ++IH DIK QN+LL +    ++ DFG++  L     +  R    GT  +
Sbjct: 141 GLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYW 195

Query: 691 VAPE-----WFRNSTITAKVDVYSFGVLLLEII 718
           +APE        ++T   K D++S G+  +E+ 
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  111 bits (280), Expect = 1e-26
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 52/221 (23%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--------VFQDGEKEFKNEVVVIG 574
            K+ +GRG   +V +      R +    AVK ++           ++  +  + E  ++ 
Sbjct: 98  PKDVIGRGVSSVVRRC---VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154

Query: 575 Q-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWN 619
           Q   H +++ L+   +      LV++ +  G L                 +         
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM-------- 206

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA 679
                   +   + +LH   +  I+H D+KP+NILLDD    R+SDFG +    L   + 
Sbjct: 207 ------RSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCH--LEPGEK 255

Query: 680 IRTAIRGTKGYVAPEWFRNSTITA------KVDVYSFGVLL 714
           +R    GT GY+APE  + S          +VD+++ GV+L
Sbjct: 256 LRELC-GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  110 bits (278), Expect = 1e-26
 Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 45/212 (21%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKN 580
             KE++G GS+ +  + +   T       AVK +D+  +D       E+ ++ +   H N
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATN---MEFAVKIIDKSKRDP----TEEIEILLRYGQHPN 77

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAF 626
           ++ L    D+G+   +V E +  G L              AS +               F
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL--------------F 123

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLAKLLTLNQSKAIRT 682
            I + + YLH   +  ++H D+KP NIL      +  + RI DFG AK L       + T
Sbjct: 124 TITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMT 179

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
               T  +VAPE        A  D++S GVLL
Sbjct: 180 PC-YTANFVAPEVLERQGYDAACDIWSLGVLL 210

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  109 bits (274), Expect = 2e-26
 Identities = 59/285 (20%), Positives = 113/285 (39%), Gaps = 37/285 (12%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 584
           G+G F   ++     T+      A K + +  + +  ++E    E+ +     H+++V  
Sbjct: 24  GKGGFAKCFEISDADTKEV---FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
            GF ++     +V E     +L          +         QI  G  YLH     ++I
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 137

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       + +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFE 195

Query: 705 VDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDC--YRNEKLDDLVEGDMEALND 761
           VDV+S G ++  ++  +  F+    +E Y  +    +    + N     L++        
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ-------- 247

Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLPP 803
                         +Q DP+ RPT+ ++L       G +   LP 
Sbjct: 248 ------------KMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  111 bits (280), Expect = 2e-26
 Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 24/207 (11%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--------VFQDGEKEFKNEVVVI 573
              + +G G+ G V        R +   VA++ + +           D     + E+ ++
Sbjct: 138 IMSKTLGSGACGEVKLAF---ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
            + +H  ++++  F D  ++  +V E +  G L   + GN +          +Q+   + 
Sbjct: 195 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253

Query: 634 YLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
           YLH      IIH D+KP+N+LL   ++    +I+DFG +K+L   ++  +RT   GT  Y
Sbjct: 254 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLC-GTPTY 307

Query: 691 VAPEWFRNSTI---TAKVDVYSFGVLL 714
           +APE   +         VD +S GV+L
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVIL 334

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  108 bits (272), Expect = 2e-26
 Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 13/196 (6%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
             +  +GRGS+G V        + +    A KK+ + F +    FK E+ ++    H N+
Sbjct: 12  TLENTIGRGSWGEVKIA---VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           +RL    ++  +  LV E    G L   +        +    I   +   + Y H     
Sbjct: 69  IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KL 125

Query: 642 QIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            + H D+KP+N L          ++ DFGLA        K +RT + GT  YV+P+    
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR--FKPGKMMRTKV-GTPYYVSPQVLEG 182

Query: 699 STITAKVDVYSFGVLL 714
                + D +S GV++
Sbjct: 183 L-YGPECDEWSAGVMM 197

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  108 bits (272), Expect = 3e-26
 Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 18/201 (8%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKN 580
            FK ++G G+FG V+       R+S     +K ++    Q   ++ + E+ V+    H N
Sbjct: 25  IFKRKLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLR----TNIAFQIARGLLYLH 636
           ++++    ++  N  +V E    G L   +         L       +  Q+   L Y H
Sbjct: 82  IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141

Query: 637 EDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
              S  ++H D+KP+NIL      +   +I DFGLA+L      +    A  GT  Y+AP
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAA-GTALYMAP 195

Query: 694 EWFRNSTITAKVDVYSFGVLL 714
           E F+   +T K D++S GV++
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVM 215

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  109 bits (275), Expect = 3e-26
 Identities = 60/285 (21%), Positives = 115/285 (40%), Gaps = 37/285 (12%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKE-FKNEVVVIGQTHHKNLVRL 584
           G+G F   ++     T+      A K + +  + +  ++E    E+ +     H+++V  
Sbjct: 50  GKGGFAKCFEISDADTKEV---FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
            GF ++     +V E     +L          +         QI  G  YLH     ++I
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 163

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H D+K  N+ L++    +I DFGLA  +  +  +  +  + GT  Y+APE       + +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFE 221

Query: 705 VDVYSFGVLLLEIISCRKSFDIEMGEE-YA-ILT-DWAFDCYRNEKLDDLVEGDMEALND 761
           VDV+S G ++  ++  +  F+    +E Y  I   +++   + N     L++        
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ-------- 273

Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLPP 803
                         +Q DP+ RPT+ ++L       G +   LP 
Sbjct: 274 ------------KMLQTDPTARPTINELLNDEFFTSGYIPARLPI 306

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  110 bits (277), Expect = 5e-26
 Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 40/216 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVR 583
           + +G GSFG+VY+  +  +      VA+KK   V QD  K FKN E+ ++ +  H N+VR
Sbjct: 60  KVIGNGSFGVVYQAKLCDSGEL---VAIKK---VLQD--KRFKNRELQIMRKLDHCNIVR 111

Query: 584 LLG-FCDEGQNRL-----LVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLL 633
           L   F   G+ +      LV +++   T+        +    L         +Q+ R L 
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170

Query: 634 YLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
           Y+H   S  I H DIKPQN+LLD D    ++ DFG AK L   +             Y+ 
Sbjct: 171 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---------NVSYIC 218

Query: 693 PEWFR------NSTI-TAKVDVYSFGVLLLEIISCR 721
             ++R       +T  T+ +DV+S G +L E++  +
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  107 bits (269), Expect = 7e-26
 Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 43/212 (20%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHK 579
           N    +G+GSFG V K      R +    AVK ++              EV ++ +  H 
Sbjct: 25  NIVCMLGKGSFGEVLKC---KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIA 625
           N+++L    ++  +  +V E    G L              A+ +               
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARII-------------- 127

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRT 682
            Q+  G+ Y+H      I+H D+KP+NILL   +   + +I DFGL+      Q+  ++ 
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKD 182

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
            I GT  Y+APE  R +    K DV+S GV+L
Sbjct: 183 RI-GTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  110 bits (278), Expect = 8e-26
 Identities = 73/292 (25%), Positives = 118/292 (40%), Gaps = 62/292 (21%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHK 579
           N    +G+GSFG V K      R +    AVK ++              EV ++ +  H 
Sbjct: 25  NIVCMLGKGSFGEVLKC---KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIA 625
           N+++L    ++  +  +V E    G L              A+               I 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA--------------RII 127

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRT 682
            Q+  G+ Y+H      I+H D+KP+NILL   +   + +I DFGL+      Q+  ++ 
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKD 182

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILT-DWA 739
            I GT  Y+APE  R +    K DV+S GV+L  ++S    F    E      + T  +A
Sbjct: 183 RI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           FD  +   + D      +A + I+            +   PSLR T  + L+
Sbjct: 241 FDLPQWRTISD------DAKDLIRK----------MLTFHPSLRITATQCLE 276

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  107 bits (269), Expect = 9e-26
 Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 41/281 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEV-VVIGQTHHKNLV 582
            E+GRG++G+V K       +    +AVK++       E K    ++ + +        V
Sbjct: 13  MELGRGAYGVVEKM--RHVPSGQI-MAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTV 69

Query: 583 RLLG-FCDEGQNRLLVY---EFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLLY 634
              G    EG     V+   E ++  +L  F    +     +  +    IA  I + L +
Sbjct: 70  TFYGALFREGD----VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH      +IH D+KP N+L++     ++ DFG++  L      A      G K Y+APE
Sbjct: 125 LHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAKDIDA-GCKPYMAPE 179

Query: 695 ----WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD 750
                      + K D++S G+ ++E+   R  +D       +  T +       ++L  
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-------SWGTPF-------QQLKQ 225

Query: 751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +VE     L   K   + V  +  C++++   RPT  +++Q
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  108 bits (273), Expect = 9e-26
 Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 45/248 (18%)

Query: 500 GDGT-IETNLPCFSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD 556
           G G+ +  N    + +   +  D F+     G+G+FG V  G   +T  S   VA+KK  
Sbjct: 1   GPGSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMS---VAIKK-- 55

Query: 557 RVFQDGEKEFKN----EVVVIGQTHHKNLVRLL------GFCDEGQNRL-LVYEFLNNGT 605
            V QD    F+N     +  +   HH N+V+L       G  D     L +V E++ + T
Sbjct: 56  -VIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-T 111

Query: 606 LASFLFGNLKPSWNLRTN----IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA 661
           L        +              FQ+ R +  LH   S  + H DIKP N+L+++    
Sbjct: 112 LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGT 170

Query: 662 -RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR------NSTI-TAKVDVYSFGVL 713
            ++ DFG AK L+ ++             Y+   ++R       +   T  VD++S G +
Sbjct: 171 LKLCDFGSAKKLSPSEP---------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCI 221

Query: 714 LLEIISCR 721
             E++   
Sbjct: 222 FAEMMLGE 229

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  108 bits (271), Expect = 1e-25
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 42/209 (20%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            + E+GRG+  IVY+      + +    A+K L +     +K  + E+ V+ +  H N++
Sbjct: 57  VESELGRGATSIVYRC---KQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNII 111

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAFQI 628
           +L    +      LV E +  G L              A+                  QI
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK--------------QI 157

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
              + YLH      I+H D+KP+N+L          +I+DFGL+K++       ++T   
Sbjct: 158 LEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVC- 211

Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
           GT GY APE  R      +VD++S G++ 
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIIT 240

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  107 bits (270), Expect = 1e-25
 Identities = 58/243 (23%), Positives = 88/243 (36%), Gaps = 57/243 (23%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVK-----KLDRVFQDGEKEFKNEVVVIGQTH 577
            K  +G+GS+G+V   +   TR      A+K     K+ ++     +  K EV ++ + H
Sbjct: 30  LKGAIGQGSYGVVRVAIENQTRA---IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTL------------------------------A 607
           H N+ RL    ++ Q   LV E  + G L                               
Sbjct: 87  HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146

Query: 608 SFLFGNLKPSWNLRTNIAF----------QIARGLLYLHEDCSAQIIHCDIKPQNILL-- 655
                     +    +             QI   L YLH   +  I H DIKP+N L   
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFST 203

Query: 656 DDYYNARISDFGLAKLLTLNQSKAIR--TAIRGTKGYVAPEWFRNST--ITAKVDVYSFG 711
           +  +  ++ DFGL+K      +      T   GT  +VAPE    +      K D +S G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263

Query: 712 VLL 714
           VLL
Sbjct: 264 VLL 266

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  108 bits (271), Expect = 2e-25
 Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 42/211 (19%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKN 580
            KEE+G+G+F +V + V  TT       A K ++  ++     ++ + E  +  +  H N
Sbjct: 33  VKEELGKGAFSVVRRCVHKTTGL---EFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAF 626
           +VRL     E     LV++ +  G L              AS                  
Sbjct: 90  IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--------------Q 135

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA---RISDFGLAKLLTLNQSKAIRTA 683
           QI   + Y H   S  I+H ++KP+N+LL         +++DFGLA  +  N S+A    
Sbjct: 136 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV--NDSEAWHGF 190

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
             GT GY++PE  +    +  VD+++ GV+L
Sbjct: 191 A-GTPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  106 bits (268), Expect = 2e-25
 Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 52/221 (23%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--------VFQDGEKEFKNEVVVI 573
              + +G G+ G V        R +   VA+K + +           D     + E+ ++
Sbjct: 13  IMSKTLGSGACGEVKLA---FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWN 619
            + +H  ++++  F D  ++  +V E +  G L                  F        
Sbjct: 70  KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-------- 120

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQ 676
                 +Q+   + YLH      IIH D+KP+N+LL   ++    +I+DFG +K+L   +
Sbjct: 121 ------YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--E 169

Query: 677 SKAIRTAIRGTKGYVAPEWFRNSTI---TAKVDVYSFGVLL 714
           +  +RT   GT  Y+APE   +         VD +S GV+L
Sbjct: 170 TSLMRTLC-GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  108 bits (272), Expect = 2e-25
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 41/216 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVR 583
           + +G GSFG+V++  ++ +      VA+KK   V QD  K FKN E+ ++    H N+V 
Sbjct: 46  KVIGNGSFGVVFQAKLVESDE----VAIKK---VLQD--KRFKNRELQIMRIVKHPNVVD 96

Query: 584 LLGF-----CDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTN----IAFQIARGLL 633
           L  F       + +  L LV E++   T+        K    +         +Q+ R L 
Sbjct: 97  LKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155

Query: 634 YLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV- 691
           Y+H   S  I H DIKPQN+LLD      ++ DFG AK+L   +             Y+ 
Sbjct: 156 YIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---------NVSYIC 203

Query: 692 -----APEW-FRNSTITAKVDVYSFGVLLLEIISCR 721
                APE  F  +  T  +D++S G ++ E++  +
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  109 bits (275), Expect = 2e-25
 Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 45/288 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-------------VFQDGEKEFKNE 569
              ++G G++G V        +   +  A+K + +               +   +E  NE
Sbjct: 40  KVRKLGSGAYGEVLLC---KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96

Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + ++    H N+++L    ++ +   LV EF   G L   +    K       NI  QI 
Sbjct: 97  ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL 156

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            G+ YLH      I+H DIKP+NILL   +   N +I DFGL+     ++   +R  + G
Sbjct: 157 SGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FSKDYKLRDRL-G 210

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILT-DWAFDCY 743
           T  Y+APE  +      K DV+S GV++  ++     F    +      +    + FD  
Sbjct: 211 TAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN 269

Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             + + D      EA   IK            +  D + R T ++ L 
Sbjct: 270 DWKNISD------EAKELIKL----------MLTYDYNKRCTAEEALN 301

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  106 bits (267), Expect = 3e-25
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 43/212 (20%)

Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHK 579
           D   + +G GSF I  K V   +     A AVK + +     E   + E+  +     H 
Sbjct: 13  DLKDKPLGEGSFSICRKCVHKKSNQ---AFAVKIISK---RMEANTQKEITALKLCEGHP 66

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIA 625
           N+V+L     +  +  LV E LN G L              AS               I 
Sbjct: 67  NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS--------------YIM 112

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRT 682
            ++   + ++H      ++H D+KP+N+L    +D    +I DFG A+L   +  + ++T
Sbjct: 113 RKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKT 168

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
               T  Y APE    +      D++S GV+L
Sbjct: 169 PC-FTLHYAAPELLNQNGYDESCDLWSLGVIL 199

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  108 bits (270), Expect = 3e-25
 Identities = 38/311 (12%), Positives = 86/311 (27%), Gaps = 75/311 (24%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFKNEVVVIGQT----- 576
             +G+       +     T  S     V      +R   +  K+ K EV+ +        
Sbjct: 84  TVLGQEDPYAYLEATDQETGES---FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN 140

Query: 577 -----------------HHKNLVRLLGFCDEGQNRLLVYEFL-------NNGTLASFLFG 612
                                  +++    + ++  ++  F        N  T    L  
Sbjct: 141 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS 200

Query: 613 NLK----PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL 668
           +         + R  +  Q+ R L  LH      ++H  ++P +I+LD      ++ F  
Sbjct: 201 HSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEH 257

Query: 669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKS 723
                   + +            A           + +T   D ++ G+ +  I  C   
Sbjct: 258 LVRDG-ASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW-CADL 315

Query: 724 -FDIEMGEEYAILTDWAFDCYRN--EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDP 780
                  +     ++W F   +N  + +  L+EG                     ++   
Sbjct: 316 PNT---DDAALGGSEWIFRSCKNIPQPVRALLEG--------------------FLRYPK 352

Query: 781 SLRPTMKKVLQ 791
             R    + ++
Sbjct: 353 EDRLLPLQAME 363

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  108 bits (271), Expect = 5e-25
 Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 41/211 (19%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKNEVVVIGQTHHKN 580
             EE+G+G+F +V +        +    A   ++   +     ++ + E  +     H N
Sbjct: 15  LFEELGKGAFSVVRRC---VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAF 626
           +VRL     E  +  L+++ +  G L              AS                  
Sbjct: 72  IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI--------------Q 117

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTA 683
           QI   +L+ H      ++H ++KP+N+LL         +++DFGLA  +   Q +A    
Sbjct: 118 QILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF 173

Query: 684 IRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
             GT GY++PE  R       VD+++ GV+L
Sbjct: 174 A-GTPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  104 bits (261), Expect = 1e-24
 Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 40/287 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTHHKNLVR 583
           E +G G+  +V        +     VA+K+++    Q    E   E+  + Q HH N+V 
Sbjct: 21  EVIGSGATAVVQAAYCAPKKEK---VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN-----IAF---QIARGLLYL 635
                       LV + L+ G++   +   +    +         IA    ++  GL YL
Sbjct: 78  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI---RTAIRGTKGYVA 692
           H       IH D+K  NILL +  + +I+DFG++  L           R    GT  ++A
Sbjct: 138 H---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194

Query: 693 PEWF-RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA-----FDCYRNE 746
           PE   +      K D++SFG      I+      IE+    A    +          +N+
Sbjct: 195 PEVMEQVRGYDFKADIWSFG------ITA-----IELATGAAPYHKYPPMKVLMLTLQND 243

Query: 747 --KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
              L+  V+         K   K  M+S  C+Q+DP  RPT  ++L+
Sbjct: 244 PPSLETGVQDKEMLKKYGKSFRK--MIS-LCLQKDPEKRPTAAELLR 287

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  105 bits (263), Expect = 2e-24
 Identities = 45/315 (14%), Positives = 89/315 (28%), Gaps = 60/315 (19%)

Query: 525 EEVGRG--SFGIVYKGVILTTRTSTTAVAVKK--LDRVFQDGEKEFKNEVVVIGQTHHKN 580
             +G+G      V       T      V V++  L+    +     + E+ V    +H N
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEY---VTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 87

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFL----FGNLKPSWNLRTNIAF---QIARGLL 633
           +V             +V  F+  G+    +       +         IA+    + + L 
Sbjct: 88  IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELA-----IAYILQGVLKALD 142

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV-- 691
           Y+H       +H  +K  +IL+       +S       +  +  +  R      K  V  
Sbjct: 143 YIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ-RVVHDFPKYSVKV 198

Query: 692 ----APEWFRNSTI--TAKVDVYSFGVLLLEIISC----------RKSFDIEMGEEYAIL 735
               +PE  + +     AK D+YS G+   E+ +           +   +   G    +L
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258

Query: 736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSI-------------------WCI 776
                              +    + +                               C+
Sbjct: 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCL 318

Query: 777 QEDPSLRPTMKKVLQ 791
           Q +P  RP+   +L 
Sbjct: 319 QRNPDARPSASTLLN 333

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  102 bits (257), Expect = 4e-24
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 48/219 (21%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLV 582
           ++ +G G+   V   + L T       AVK +++           EV ++ Q   H+N++
Sbjct: 18  EDVLGEGAHARVQTCINLITSQ---EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTL--------------ASFLFGNLKPSWNLRTNIAFQI 628
            L+ F +E     LV+E +  G++              AS               +   +
Sbjct: 75  ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS--------------VVVQDV 120

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           A  L +LH   +  I H D+KP+NIL    +     +I DF L   + LN   +  +   
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177

Query: 686 -----GTKGYVAPEWFRNSTITAK-----VDVYSFGVLL 714
                G+  Y+APE     +  A       D++S GV+L
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  102 bits (257), Expect = 6e-24
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEV-VVIGQTHHKNLV 582
            E+GRG++G V K V   +      +AVK++     + E K+   ++ VV+  +    +V
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQ---IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIV 84

Query: 583 RLLG-FCDEGQNRLLVY---EFLNNGTLASFLFGNLKPSWNLRTN------IAFQIARGL 632
           +  G    EG      +   E ++  +   F    +    +          I     + L
Sbjct: 85  QFYGALFREGD----CWICMELMS-TSFDKFY-KYVYSVLDDVIPEEILGKITLATVKAL 138

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            +L E+   +IIH DIKP NILLD   N ++ DFG++  L    S A      G + Y+A
Sbjct: 139 NHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDA-GCRPYMA 193

Query: 693 PE----WFRNSTITAKVDVYSFGVLLLEI 717
           PE             + DV+S G+ L E+
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYEL 222

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  102 bits (257), Expect = 8e-24
 Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 28/205 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
            E+G GSFG VY    +        VA+KK+    +      ++   EV  + +  H N 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEV---VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 116

Query: 582 VRLLGFCDEGQNRLLVYEFLNNG--TLASFLFGNLKPSWNLRTNIAF---QIARGLLYLH 636
           ++  G         LV E+       L       L+        IA       +GL YLH
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-----IAAVTHGALQGLAYLH 171

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-- 694
              S  +IH D+K  NILL +    ++ DFG A ++          +  GT  ++APE  
Sbjct: 172 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA----P--ANSFVGTPYWMAPEVI 222

Query: 695 -WFRNSTITAKVDVYSFGVLLLEII 718
                     KVDV+S G+  +E+ 
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELA 247

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  101 bits (254), Expect = 1e-23
 Identities = 71/310 (22%), Positives = 117/310 (37%), Gaps = 58/310 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR------VFQDGEKEFKNEVV----VIG 574
             +G+G FG V+ G  LT R     VA+K + R                 EV     V  
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIAR 630
              H  ++RLL + +  +  +LV E          LF  +     L    +   F Q+  
Sbjct: 94  GGGHPGVIRLLDWFETQEGFMLVLERPLPAQD---LFDYITEKGPLGEGPSRCFFGQVVA 150

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
            + + H   S  ++H DIK +NIL+D     A++ DFG   LL     +       GT+ 
Sbjct: 151 AIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFD-GTRV 203

Query: 690 YVAPEWFRNSTIT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
           Y  PEW            V+S G+LL +++     F+    ++  +  +  F  + +   
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE---RDQEILEAELHFPAHVSPDC 260

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLPP-- 803
             L+                      C+   PS RP+++++L    M     +V L P  
Sbjct: 261 CALIR--------------------RCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSK 300

Query: 804 -NPYPFSSSM 812
             P P + S+
Sbjct: 301 GGPAPLAWSL 310

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  100 bits (251), Expect = 3e-23
 Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 38/279 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEV-VVIGQTHHKNLV 582
            E+G G+ G V+K     T      +AVK++ R     E K    ++ VV+       +V
Sbjct: 31  GEMGSGTCGQVWKMRFRKTGH---VIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87

Query: 583 RLLG-FCDEGQNRLLVY---EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           +  G F         V+   E +                  +   +   I + L YL E 
Sbjct: 88  QCFGTFITNTD----VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE---- 694
               +IH D+KP NILLD+    ++ DFG++  L     KA   +  G   Y+APE    
Sbjct: 144 --HGVIHRDVKPSNILLDERGQIKLCDFGISGRLV--DDKAKDRSA-GCAAYMAPERIDP 198

Query: 695 -WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
                     + DV+S G+ L+E+ + +  +           TD+       E L  +++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYK-------NCKTDF-------EVLTKVLQ 244

Query: 754 GDMEAL-NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +   L   +            C+ +D   RP   K+L+
Sbjct: 245 EEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 96.5 bits (241), Expect = 3e-22
 Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 18/194 (9%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           G G++G V   V   T  +   VAVK +D     D  +  K E+ +    +H+N+V+  G
Sbjct: 16  GEGAYGEVQLAVNRVTEEA---VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHEDCSAQ 642
              EG  + L  E+ + G L    F  ++P   +    A   F Q+  G++YLH      
Sbjct: 73  HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLN-QSKAIRTAIRGTKGYVAPEWFRNSTI 701
           I H DIKP+N+LLD+  N +ISDFGLA +   N + + +     GT  YVAPE  +    
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRREF 184

Query: 702 T-AKVDVYSFGVLL 714
               VDV+S G++L
Sbjct: 185 HAEPVDVWSCGIVL 198

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 96.9 bits (242), Expect = 3e-22
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 23/200 (11%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR----VFQDGEKEFKNEVVVIGQTHHKNLVR 583
           G GS+G V + +   T       AVK L +       +GE   K E+ ++ +  HKN+++
Sbjct: 14  GEGSYGKVKEVLDSETLCR---RAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 584 LLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHE 637
           L+    +E + ++ +V E+   G     +  ++ P        A   F Q+  GL YLH 
Sbjct: 71  LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSV-PEKRFPVCQAHGYFCQLIDGLEYLH- 126

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL-TLNQSKAIRTAIRGTKGYVAPEWF 696
             S  I+H DIKP N+LL      +IS  G+A+ L         RT+ +G+  +  PE  
Sbjct: 127 --SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEIA 183

Query: 697 RNSTI--TAKVDVYSFGVLL 714
                    KVD++S GV L
Sbjct: 184 NGLDTFSGFKVDIWSAGVTL 203

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 97.0 bits (242), Expect = 4e-22
 Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 48/280 (17%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR------VFQDGEKEFKNEVVVIGQTHH 578
             +G G FG VY G+ ++       VA+K +++                 EVV++ +   
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105

Query: 579 K--NLVRLLGFCDEGQNRLLVYEFLNN-GTLASFLF--GNLKPSWNLRTNIAFQIARGLL 633
               ++RLL + +   + +L+ E       L  F+   G L+    L  +  +Q+   + 
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE--ELARSFFWQVLEAVR 163

Query: 634 YLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
           + H   +  ++H DIK +NIL+D +    ++ DFG   LL   +         GT+ Y  
Sbjct: 164 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD-GTRVYSP 216

Query: 693 PEWFRNSTITA-KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           PEW R          V+S G+LL +++     F+    +E  I     F    + +   L
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQRVSSECQHL 273

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +                     WC+   PS RPT +++  
Sbjct: 274 IR--------------------WCLALRPSDRPTFEEIQN 293

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 97.0 bits (242), Expect = 5e-22
 Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 38/289 (13%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKNEVVVIGQTHHKNLVRLL 585
           G+G+F  V     + T      VA+K +D+  +     ++   EV ++   +H N+V+L 
Sbjct: 24  GKGNFAKVKLARHILTGRE---VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80

Query: 586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIH 645
              +  +   L+ E+ + G +  +L  + +       +   QI   + Y H+     I+H
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVH 137

Query: 646 CDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-AK 704
            D+K +N+LLD   N +I+DFG +   T+     +     G   Y APE F+       +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGG--KLDAFC-GAPPYAAPELFQGKKYDGPE 194

Query: 705 VDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDC--YRNEKLDDLVEGDMEALND 761
           VDV+S GV+L  ++S    FD + + E    +    +    Y +   ++L++        
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK-------- 246

Query: 762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLPPNPYP 807
                         +  +P  R T++++++   +  G  E  L P   P
Sbjct: 247 ------------RFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEP 283

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 97.0 bits (242), Expect = 6e-22
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 25/201 (12%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLV 582
           K+ +G G  G V +     T       A+K L         + + EV    Q +   ++V
Sbjct: 34  KQVLGLGVNGKVLECFHRRTGQ---KCALKLLYDS-----PKARQEVDHHWQASGGPHIV 85

Query: 583 RLLGFCDEGQNR----LLVYEFLNNGTLASFLFGNLKPSWNLR--TNIAFQIARGLLYLH 636
            +L   +   +     L++ E +  G L S +      ++  R    I   I   + +LH
Sbjct: 86  CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145

Query: 637 EDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
              S  I H D+KP+N+L    +     +++DFG AK  T N    ++T    T  YVAP
Sbjct: 146 ---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPC-YTPYYVAP 198

Query: 694 EWFRNSTITAKVDVYSFGVLL 714
           E           D++S GV++
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIM 219

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 96.2 bits (240), Expect = 8e-22
 Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 35/294 (11%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLG 586
           G G++G V   V   T  +   VAVK +D     D  +  K E+ +    +H+N+V+  G
Sbjct: 16  GEGAYGEVQLAVNRVTEEA---VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 587 FCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHEDCSAQ 642
              EG  + L  E+ + G L    F  ++P   +    A   F Q+  G++YLH      
Sbjct: 73  HRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIG 125

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTL-NQSKAIRTAIRGTKGYVAPEWFRNSTI 701
           I H DIKP+N+LLD+  N +ISDFGLA +    N+ + +     GT  YVAPE  +    
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRREF 184

Query: 702 T-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
               VDV+S G++L  +++    +D +  +     +DW            +   D   L 
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKI---DSAPLA 240

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ---MLEGVVEVSLPPNPYPFSSS 811
            +    K+++        +PS R T+  + +     + + + +  P       S
Sbjct: 241 LLH---KILVE-------NPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVS 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 96.7 bits (241), Expect = 2e-21
 Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 52/216 (24%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNL 581
             + +G G  G V +     T+      A+K L         + + EV +  + +   ++
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQ---EKFALKMLQDC-----PKARREVELHWRASQCPHI 117

Query: 582 VRLLGFCDEGQNR----LLVYEFLNNGTL----------------ASFLFGNLKPSWNLR 621
           VR++   +         L+V E L+ G L                AS             
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS------------- 164

Query: 622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSK 678
             I   I   + YLH   S  I H D+KP+N+L          +++DFG AK  T + S 
Sbjct: 165 -EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 219

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLL 714
            + T    T  YVAPE           D++S GV++
Sbjct: 220 -LTTPC-YTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 97.9 bits (244), Expect = 2e-21
 Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 19/201 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQTHHKNLV 582
           +GRG FG V+         +T  + A KKL   R+ +    +    E  ++ + H + +V
Sbjct: 193 LGRGGFGEVF----ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLHE 637
            L  +  E +  L LV   +N G +   ++   + +   +   A F   QI  GL +LH 
Sbjct: 249 SLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH- 306

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
                II+ D+KP+N+LLDD  N RISD GLA  L   Q+K       GT G++APE   
Sbjct: 307 --QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLL 362

Query: 698 NSTITAKVDVYSFGVLLLEII 718
                  VD ++ GV L E+I
Sbjct: 363 GEEYDFSVDYFALGVTLYEMI 383

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 93.7 bits (233), Expect = 4e-21
 Identities = 37/291 (12%), Positives = 76/291 (26%), Gaps = 58/291 (19%)

Query: 525 EEVGRGSFGIVYKGV-ILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKN 580
              G       ++ +     R     VA+  +D      +   +E  +  + + +     
Sbjct: 37  IFHGGVPPLQFWQALDTALDRQ----VALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92

Query: 581 LVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           + R+L         L+V E++  G+L      +  P   +R      +A      H    
Sbjct: 93  VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIR--AMQSLAAAADAAHR--- 147

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
           A +      P  +         +S  G   L                   +         
Sbjct: 148 AGVALSIDHPSRVR--------VSIDGDVVL--------------AYPATMPDA------ 179

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAFDCYRNEKLDDLVEGDMEA 758
              + D+   G  L  ++  R                 D A        +D  +   + A
Sbjct: 180 -NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA 238

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRP--TMKKVLQMLEGVVEVSLPPNPYP 807
                    +       +Q D  +R   T+  ++Q    V + +    P  
Sbjct: 239 ---------VAA---RSVQGDGGIRSASTLLNLMQQATAVADRTEVLGPID 277

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 94.3 bits (235), Expect = 4e-21
 Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 22/214 (10%)

Query: 518 EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ 575
              D+++   ++GRG +  V++ + +T       V VK L  V    +K+ K E+ ++  
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEK---VVVKILKPVK---KKKIKREIKILEN 86

Query: 576 -THHKNLVRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
                N++ L     D       LV+E +NN      L+  L    ++R  + ++I + L
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDY-DIRFYM-YEILKAL 143

Query: 633 LYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
            Y H   S  I+H D+KP N+++D ++   R+ D+GLA+     Q   +R A   ++ + 
Sbjct: 144 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA---SRYFK 197

Query: 692 APEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSF 724
            PE   +  +    +D++S G +L  +I  ++ F
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 94.7 bits (236), Expect = 5e-21
 Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
             VG G++G V   +   +      VA+KKL R FQ     K    E++++    H+N++
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEK---VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 86

Query: 583 RLL------GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            LL             +  LV  F+    L   +         ++  + +Q+ +GL Y+H
Sbjct: 87  GLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEE-KIQ-YLVYQMLKGLKYIH 143

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              SA ++H D+KP N+ +++    +I DFGLA           R A     GYV   W+
Sbjct: 144 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWY 189

Query: 697 R-------NSTITAKVDVYSFGVLLLEIISCRKSF 724
           R              VD++S G ++ E+++ +  F
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 94.8 bits (236), Expect = 5e-21
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-EVVVIGQTHHKNLVR 583
           + +G GSFGIV +   + +       A+KK   V QD    +KN E+ ++    H N+++
Sbjct: 13  KTLGTGSFGIVCEVFDIESGKR---FALKK---VLQD--PRYKNRELDIMKVLDHVNIIK 64

Query: 584 LL--------------------GFCDEGQNRLLVYEFLNNGTLASFLFGNL--------- 614
           L+                           N +  +        +   + N+         
Sbjct: 65  LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTL 124

Query: 615 ----KPSWNLRTNI--------AFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNA 661
               K       +I         +Q+ R + ++H   S  I H DIKPQN+L++      
Sbjct: 125 HKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTL 181

Query: 662 RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISC 720
           ++ DFG AK L  ++      A   ++ Y APE    +T  T  +D++S G +  E+I  
Sbjct: 182 KLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238

Query: 721 RKSF 724
           +  F
Sbjct: 239 KPLF 242

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 96.4 bits (240), Expect = 7e-21
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 20/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQTHHKNLV 582
           +G+G FG V          +T  + A KKL   R+ +   +    NE  ++ + + + +V
Sbjct: 192 LGKGGFGEVC----ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVV 247

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNI--AFQIARGLLYLHEDC 639
            L  +  E ++ L LV   +N G L   ++   +  +     +  A +I  GL  LH + 
Sbjct: 248 SLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE- 305

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR-GTKGYVAPEWFRN 698
             +I++ D+KP+NILLDD+ + RISD GLA  +   Q        R GT GY+APE  +N
Sbjct: 306 --RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKN 359

Query: 699 STITAKVDVYSFGVLLLEII 718
              T   D ++ G LL E+I
Sbjct: 360 ERYTFSPDWWALGCLLYEMI 379

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 93.6 bits (233), Expect = 7e-21
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 29/216 (13%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR--VFQDGEKEFKN------EVVVIGQT 576
             +G G+FG V+  V          V VK + +  V +D   E         E+ ++ + 
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKE---VVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF------GNLKPSWNLRTNIAFQIAR 630
            H N++++L   +      LV E   +G     LF        L     L + I  Q+  
Sbjct: 87  EHANIIKVLDIFENQGFFQLVMEKHGSG---LDLFAFIDRHPRLDE--PLASYIFRQLVS 141

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
            + YL       IIH DIK +NI++ + +  ++ DFG A  L   + K   T   GT  Y
Sbjct: 142 AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE--RGKLFYTFC-GTIEY 195

Query: 691 VAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFD 725
            APE    +     +++++S GV L  ++     F 
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 93.1 bits (232), Expect = 8e-21
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAV-AVKKLD--RVFQDGEKEF-KNEVVVIGQTH 577
            F + +G GSF  V     L    +T+   A+K L+   + ++ +  +   E  V+ +  
Sbjct: 33  KFGKILGEGSFSTVV----LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88

Query: 578 HKNLVRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARG 631
           H   V+L   F D+   +L     +  NG L       ++   +       F   +I   
Sbjct: 89  HPFFVKLYFTFQDD--EKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAEIVSA 142

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L YLH      IIH D+KP+NILL++  + +I+DFG AK+L+    +A   +  GT  YV
Sbjct: 143 LEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 199

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIIS 719
           +PE     +     D+++ G ++ ++++
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVA 227

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 94.0 bits (234), Expect = 1e-20
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVRL 584
           +G G+ GIV          +   VA+KKL R FQ+    K    E+V++   +HKN++ L
Sbjct: 33  IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89

Query: 585 L------GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
           L         +E Q+  +V E ++   L   +   L     +   + +Q+  G+ +LH  
Sbjct: 90  LNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHE-RMSY-LLYQMLCGIKHLH-- 144

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            SA IIH D+KP NI++      +I DFGLA+    +      T    T+ Y APE    
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILG 200

Query: 699 STITAKVDVYSFGVLLLEIISCRKSF 724
                 VD++S G ++ E+I     F
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGVLF 226

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 89.2 bits (222), Expect = 1e-19
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           G G+FG V  G    T      VAVK L+R      D   + K E+  +    H ++++L
Sbjct: 20  GVGTFGKVKIGEHQLTGHK---VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
                   +  +V E+++ G L  ++  + +        +  QI   + Y H      ++
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVV 133

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-A 703
           H D+KP+N+LLD + NA+I+DFGL+ +++    + +RT+  G+  Y APE          
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSC-GSPNYAAPEVISGRLYAGP 190

Query: 704 KVDVYSFGVLL 714
           +VD++S GV+L
Sbjct: 191 EVDIWSCGVIL 201

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 90.9 bits (226), Expect = 1e-19
 Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 77/246 (31%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE------------KEFKNEV 570
             +++G+G++GIV+K +   T      VAVKK+   FQ+               E     
Sbjct: 13  LVKKLGKGAYGIVWKSIDRRTGEV---VAVKKIFDAFQNSTDAQRTFREIMILTELSG-- 67

Query: 571 VVIGQTHHKNLVRLLG-FCDEGQNRL-LVYEF----LNNGTLASFLFGNLKPSWNLRTN- 623
                  H+N+V LL     +    + LV+++    L+                 +R N 
Sbjct: 68  -------HENIVNLLNVLRADNDRDVYLVFDYMETDLHA---------------VIRANI 105

Query: 624 --------IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
                   + +Q+ + + YLH   S  ++H D+KP NILL+   + +++DFGL++     
Sbjct: 106 LEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162

Query: 676 QSKAIRTAIRGTK-------------GYVAPEWFR-------NSTITAKVDVYSFGVLLL 715
           +       +   +              YVA  W+R       ++  T  +D++S G +L 
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222

Query: 716 EIISCR 721
           EI+  +
Sbjct: 223 EILCGK 228

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 90.1 bits (224), Expect = 2e-19
 Identities = 53/225 (23%), Positives = 83/225 (36%), Gaps = 43/225 (19%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE--FKN---------EVVVI 573
             +  GS+G V  GV     +    VA+K++     DG       +         E+ ++
Sbjct: 28  RFISSGSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83

Query: 574 GQTHHKNLVRLL-----GFCDEGQNRLLVYEFLNNGT-LASFLFGNLKPSWNLRTN-IAF 626
              HH N++ L                LV E +   T LA  +                +
Sbjct: 84  NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM--RTDLAQVIHDQRIVISPQHIQYFMY 141

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
            I  GL  LH    A ++H D+ P NILL D  +  I DF LA+  T + +         
Sbjct: 142 HILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN--------- 189

Query: 687 TKGYVAPEWFR-------NSTITAKVDVYSFGVLLLEIISCRKSF 724
              YV   W+R           T  VD++S G ++ E+ + +  F
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 48/226 (21%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-------------------------- 557
           K+E+G+GS+G+V         T     A+K L +                          
Sbjct: 18  KDEIGKGSYGVVKLAYNENDNTY---YAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74

Query: 558 VFQDGEKEFKNEVVVIGQTHHKNLVRLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLK 615
             +   ++   E+ ++ +  H N+V+L+    D  ++ L +V+E +N G +       LK
Sbjct: 75  QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV--MEVPTLK 132

Query: 616 PSWNLRTNIA---F-QIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL 671
           P   L  + A   F  + +G+ YLH     +IIH DIKP N+L+ +  + +I+DFG++  
Sbjct: 133 P---LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186

Query: 672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT---AKVDVYSFGVLL 714
              + +    T   GT  ++APE    +        +DV++ GV L
Sbjct: 187 FKGSDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 88.8 bits (221), Expect = 2e-19
 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 20/162 (12%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
           + ++   ++G GS+G+V+K      R +   VA+KK     +  +          E+ ++
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCR---NRDTGQIVAIKK---FLESEDDPVIKKIALREIRML 56

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARG 631
            Q  H NLV LL      +   LV+E+ ++ T+   L  +    P   ++ +I +Q  + 
Sbjct: 57  KQLKHPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVK-SITWQTLQA 114

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT 673
           + + H       IH D+KP+NIL+  +   ++ DFG A+LLT
Sbjct: 115 VNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 89.2 bits (222), Expect = 3e-19
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 25/186 (13%)

Query: 496 RNSPGDGTIETNLPCFSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVK 553
            +S G      NL         ++ + ++    VG GS+G+V K      + +   VA+K
Sbjct: 7   HHSSGVDLGTENLYF-------QSMEKYENLGLVGEGSYGMVMKC---RNKDTGRIVAIK 56

Query: 554 KLDRVFQDGEKE-FKN----EVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLAS 608
           K     +  + +  K     E+ ++ Q  H+NLV LL  C + +   LV+EF+++ T+  
Sbjct: 57  K---FLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILD 112

Query: 609 FLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG 667
            L        + +     FQI  G+ + H   S  IIH DIKP+NIL+      ++ DFG
Sbjct: 113 DLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFG 169

Query: 668 LAKLLT 673
            A+ L 
Sbjct: 170 FARTLA 175

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 89.3 bits (222), Expect = 3e-19
 Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 60/228 (26%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
           + VG G++G V   V   T      VA+KKL R FQ     K    E+ ++    H+N++
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAK---VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87

Query: 583 RLL------GFCDEGQNRLLVYEF-------------LNNGTLASFLFGNLKPSWNLRTN 623
            LL         D+  +  LV  F             L    +   ++            
Sbjct: 88  GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY------------ 135

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
              Q+ +GL Y+H   +A IIH D+KP N+ +++    +I DFGLA           R A
Sbjct: 136 ---QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA-----------RQA 178

Query: 684 IRGTKGYVAPEWFR-------NSTITAKVDVYSFGVLLLEIISCRKSF 724
                GYV   W+R           T  VD++S G ++ E+I+ +  F
Sbjct: 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 88.8 bits (221), Expect = 4e-19
 Identities = 46/231 (19%), Positives = 91/231 (39%), Gaps = 51/231 (22%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKN 580
            K  +G G++G+V       T      VA+KK+   F           E+ ++    H+N
Sbjct: 15  LKSLLGEGAYGVVCSATHKPTGEI---VAIKKI-EPFDKPLFALRTLREIKILKHFKHEN 70

Query: 581 LVRLL-----GFCDEGQNRLLVYEF-------------LNNGTLASFLFGNLKPSWNLRT 622
           ++ +         +      ++ E              L++  +  F++           
Sbjct: 71  IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY----------- 119

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT 682
               Q  R +  LH    + +IH D+KP N+L++   + ++ DFGLA+++  + +     
Sbjct: 120 ----QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172

Query: 683 AIRGTK--GYVAPEWFR------NSTI-TAKVDVYSFGVLLLEIISCRKSF 724
             + +    +VA  W+R       S   +  +DV+S G +L E+   R  F
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 89.9 bits (223), Expect = 4e-19
 Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 44/235 (18%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN---EVVVIGQTHHKN 580
           +  +G GS+G V +      +     VA+KK+ RVF+D   + K    E+ ++ + +H +
Sbjct: 58  RHLIGTGSYGHVCEAYDKLEKRV---VAIKKILRVFED-LIDCKRILREIAILNRLNHDH 113

Query: 581 LVRLLGFC----DEGQNRL-LVYEFLNNGT-LASFLFGNLKPSWNLRTNIAFQIARGLLY 634
           +V++L        E  + L +V E     +         +  +      + + +  G+ Y
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY 171

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK------ 688
           +H   SA I+H D+KP N L++   + ++ DFGLA+ +   ++   +  I   +      
Sbjct: 172 VH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228

Query: 689 -------------GYVAPEWFR------NSTI-TAKVDVYSFGVLLLEIISCRKS 723
                        G+V   W+R           T  +DV+S G +  E+++  K 
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 88.5 bits (220), Expect = 6e-19
 Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 60/228 (26%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
             VG G++G V       T      VAVKKL R FQ     K    E+ ++    H+N++
Sbjct: 35  SPVGSGAYGSVCAAFDTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91

Query: 583 RLL------GFCDEGQNRLLVYEF-------------LNNGTLASFLFGNLKPSWNLRTN 623
            LL         +E  +  LV                L +  +   ++            
Sbjct: 92  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY------------ 139

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA 683
              QI RGL Y+H   SA IIH D+KP N+ +++    +I DFGLA           R  
Sbjct: 140 ---QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-----------RHT 182

Query: 684 IRGTKGYVAPEWFR------NSTI-TAKVDVYSFGVLLLEIISCRKSF 724
                GYVA  W+R      N       VD++S G ++ E+++ R  F
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 89.5 bits (222), Expect = 7e-19
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 32/214 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
           + +G G+ GIV          +   VA+KKL R FQ+    K    E+V++   +HKN++
Sbjct: 68  KPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124

Query: 583 RLL------GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            LL         +E Q+  LV E ++   L   +   L       + + +Q+  G+ +LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDH--ERMSYLLYQMLCGIKHLH 181

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              SA IIH D+KP NI++      +I DFGLA+    +              YV   ++
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---------MTPYVVTRYY 229

Query: 697 R------NSTITAKVDVYSFGVLLLEIISCRKSF 724
           R             VD++S G ++ E++  +  F
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 87.9 bits (218), Expect = 2e-18
 Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 57/239 (23%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNL 581
           K  +GRGS+G VY      T  +   VA+KK++R+F+D    K    E+ ++ +     +
Sbjct: 31  KHLIGRGSYGYVYLAYDKNTEKN---VAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87

Query: 582 VRLLG-FCDEGQNRL----LVYEFLNNGT-LASFLFGNLKPSWNLRTNIA---------- 625
           +RL      +   +     +V E     + L              +T I           
Sbjct: 88  IRLYDLIIPDDLLKFDELYIVLEIA--DSDLKKLF----------KTPIFLTEEHIKTIL 135

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           + +  G  ++H    + IIH D+KP N LL+   + ++ DFGLA+ +   +   I   + 
Sbjct: 136 YNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192

Query: 686 GTK--------------GYVAPEWFR------NSTI-TAKVDVYSFGVLLLEIISCRKS 723
             +               +V   W+R           T  +D++S G +  E+++  +S
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 86.6 bits (215), Expect = 2e-18
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 21/205 (10%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGF 587
           G G+FG+        T+     VAVK ++R     E   + E++      H N+VR    
Sbjct: 29  GSGNFGVARLMRDKLTKEL---VAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKEV 84

Query: 588 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHEDCSAQI 643
                +  ++ E+ + G L   +    +       + A   F Q+  G+ Y H   S QI
Sbjct: 85  ILTPTHLAIIMEYASGGELYERICNAGR----FSEDEARFFFQQLLSGVSYCH---SMQI 137

Query: 644 IHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
            H D+K +N LLD       +I DFG +K   L+     ++ + GT  Y+APE       
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKSTV-GTPAYIAPEVLLRQEY 194

Query: 702 T-AKVDVYSFGVLLLEIISCRKSFD 725
                DV+S GV L  ++     F+
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFE 219

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 87.5 bits (217), Expect = 3e-18
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 21/195 (10%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           G G+FG V  G    T      VAVK L+R      D   + + E+  +    H ++++L
Sbjct: 25  GVGTFGKVKVGKHELTGHK---VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHEDCS 640
                   +  +V E+++ G L  ++  N +    L    +   F QI  G+ Y H    
Sbjct: 82  YQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCH---R 134

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             ++H D+KP+N+LLD + NA+I+DFGL+ +++    + +RT+  G+  Y APE      
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSC-GSPNYAAPEVISGRL 191

Query: 701 -ITAKVDVYSFGVLL 714
               +VD++S GV+L
Sbjct: 192 YAGPEVDIWSSGVIL 206

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 88.4 bits (219), Expect = 3e-18
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 21/201 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF----KNEVVVIGQTHHK 579
           +GRG FG VY       +  T  + A+K L   R+     +      +  + ++      
Sbjct: 197 IGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252

Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
            +V +  +     ++L  + + +N G L   L  +   S       A +I  GL ++H  
Sbjct: 253 FIVCM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-- 309

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE-WFR 697
            +  +++ D+KP NILLD++ + RISD GLA   +  +      A  GT GY+APE   +
Sbjct: 310 -NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQK 364

Query: 698 NSTITAKVDVYSFGVLLLEII 718
                +  D +S G +L +++
Sbjct: 365 GVAYDSSADWFSLGCMLFKLL 385

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 85.0 bits (211), Expect = 5e-18
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)

Query: 528 GRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           G GSFG V       T+     VA+K + R      D     + E+  +    H ++++L
Sbjct: 18  GEGSFGKVKLATHYKTQQK---VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA---F-QIARGLLYLHEDCS 640
                   + ++V E+   G L  ++    +    +  +     F QI   + Y H    
Sbjct: 75  YDVITTPTDIVMVIEYAG-GELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCH---R 126

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
            +I+H D+KP+N+LLDD  N +I+DFGL+ ++T      ++T+  G+  Y APE      
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVINGKL 183

Query: 701 IT-AKVDVYSFGVLLLEIISCRKSFD 725
               +VDV+S G++L  ++  R  FD
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 84.1 bits (209), Expect = 6e-18
 Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 33/217 (15%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
             ++  E++G G++G V+K      R +   VA+K++ R+  D + E        E+ ++
Sbjct: 2   QKYEKLEKIGEGTYGTVFKA---KNRETHEIVALKRV-RL--DDDDEGVPSSALREICLL 55

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGL 632
            +  HKN+VRL       +   LV+EF +   L  +           +  +  FQ+ +GL
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGL 114

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRG------ 686
            + H   S  ++H D+KPQN+L++     ++++FGLA        +A    +R       
Sbjct: 115 GFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLA--------RAFGIPVRCYSAEVV 163

Query: 687 TKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRK 722
           T  Y  P+    + + +  +D++S G +  E+ +  +
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 84.5 bits (210), Expect = 7e-18
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 23/160 (14%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
           + ++  E+VG G++G+VYK      R     VA+K++ R+  D E E        E+ ++
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRI----VALKRI-RL--DAEDEGIPSTAIREISLL 73

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIAR 630
            + HH N+V L+      +   LV+EF+    L   L      L+ S  ++    +Q+ R
Sbjct: 74  KELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDS-QIKI-YLYQLLR 130

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           G+ + H     +I+H D+KPQN+L++     +++DFGLA+
Sbjct: 131 GVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 83.3 bits (207), Expect = 1e-17
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 23/160 (14%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
           + +   E++G G++G+VYK       T     A+KK   +  + E E        E+ ++
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGET----FALKK---IRLEKEDEGIPSTTIREISIL 54

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIAR 630
            +  H N+V+L       +  +LV+E L+   L   L    G L+     ++    Q+  
Sbjct: 55  KELKHSNIVKLYDVIHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESV-TAKS-FLLQLLN 111

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           G+ Y H     +++H D+KPQN+L++     +I+DFGLA+
Sbjct: 112 GIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 83.3 bits (207), Expect = 1e-17
 Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 19/159 (11%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
           +NF+  E++G G++G+VYK     T      VA+KK+ R+  D E E        E+ ++
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGE---VVALKKI-RL--DTETEGVPSTAIREISLL 56

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARG 631
            + +H N+V+LL          LV+EFL+   L  F+  +      L    +  FQ+ +G
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           L + H   S +++H D+KPQN+L++     +++DFGLA+
Sbjct: 116 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 83.5 bits (207), Expect = 2e-17
 Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 26/164 (15%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN-----EVVVI 573
           D ++   ++G G++G VYK +   T  +   VA+K++ R+  + E+E        EV ++
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNET---VAIKRI-RL--EHEEEGVPGTAIREVSLL 87

Query: 574 GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARG 631
            +  H+N++ L           L++E+  N  L  ++    ++     +++   +Q+  G
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMR-VIKS-FLYQLING 144

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNAR-----ISDFGLAK 670
           + + H   S + +H D+KPQN+LL     +      I DFGLA+
Sbjct: 145 VNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 84.3 bits (209), Expect = 2e-17
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 41/224 (18%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQTHHKNLV 582
           +G+GSFG V     +  +  T  + A+K +   +  +  E      E+ ++    H  LV
Sbjct: 23  IGKGSFGKVC----IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIAR 630
            L   F DE    + +V + L  G L           ++L+ N+ F          ++  
Sbjct: 79  NLWYSFQDEE--DMFMVVDLLLGGDL----R------YHLQQNVHFKEETVKLFICELVM 126

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY 690
            L YL    + +IIH D+KP NILLD++ +  I+DF +A +L         T + GTK Y
Sbjct: 127 ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMAGTKPY 180

Query: 691 VAPEWFRNSTI---TAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           +APE F +      +  VD +S GV   E++  R+ + I     
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS 224

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 33/186 (17%)

Query: 623 NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN----QSK 678
             +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +    +  
Sbjct: 197 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILT 736
             R  ++      APE   +   T + DV+SFGVLL EI S   S    +++ EE     
Sbjct: 254 DARLPLKWM----APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FC 306

Query: 737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKL--VMVSIWCIQEDPSLRPTMKKVLQMLE 794
               +  R    D                 ++   M+  W    +PS RPT  ++++ L 
Sbjct: 307 RRLKEGTRMRAPDY-------------TTPEMYQTMLDCW--HGEPSQRPTFSELVEHLG 351

Query: 795 GVVEVS 800
            +++ +
Sbjct: 352 NLLQAN 357

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 12/153 (7%)

Query: 523 FKEEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQ-THH 578
             + +GRG+FG V +     +    +   VAVK L       E +   +E+ ++    HH
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 579 KNLVRLLGFC-DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
            N+V LLG C   G   +++ EF   G L+++L        + R        +G  +   
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-------RSKRNEFVPYKTKGARFRQG 138

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
                 I  D+K +   +    ++  S F   K
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 81.9 bits (203), Expect = 5e-17
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 51/230 (22%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
           + +G G  G+V+  V          VA+KK+  V  D +  K    E+ +I +  H N+V
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKR---VAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIV 71

Query: 583 RLL--------------GFCDEGQNRLLVYEFLNNGT-LASFLFGNLKPSWNLRTN---- 623
           ++               G   E  +  +V E++   T LA+ L         L       
Sbjct: 72  KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM--ETDLANVLEQG-----PLLEEHARL 124

Query: 624 IAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLNQSKAIR- 681
             +Q+ RGL Y+H   SA ++H D+KP N+ ++      +I DFGLA+++  + S     
Sbjct: 125 FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL 181

Query: 682 TAIRGTKGYVAPEWFR-------NSTITAKVDVYSFGVLLLEIISCRKSF 724
           +        +  +W+R        +  T  +D+++ G +  E+++ +  F
Sbjct: 182 S------EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 81.1 bits (201), Expect = 8e-17
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 33/221 (14%)

Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV---- 572
           AT  ++   E+G G++G VYK     +      VA+K + RV           + +    
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGH---FVALKSV-RV--PNGGGGGGGLPISTVR 60

Query: 573 -------IGQTHHKNLVRLL----GFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNL 620
                  +    H N+VRL+        + + ++ LV+E ++   L ++L     P    
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 119

Query: 621 RT--NIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
            T  ++  Q  RGL +LH   +  I+H D+KP+NIL+      +++DFGLA++ +   + 
Sbjct: 120 ETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA- 175

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
              T +  T  Y APE    ST    VD++S G +  E+  
Sbjct: 176 --LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 214

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 82.2 bits (203), Expect = 1e-16
 Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 24/164 (14%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVVIGQTHHKNLV 582
             +VGRG++G VYK      +      A+K+++     G       E+ ++ +  H N++
Sbjct: 26  GCKVGRGTYGHVYKAKRKDGKDDKD-YALKQIEG---TGISMSACREIALLRELKHPNVI 81

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTN---------IAFQIARG 631
            L   F      ++ L++++  +  L   +  +     N +           + +QI  G
Sbjct: 82  SLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNAR----ISDFGLAKL 671
           + YLH   +  ++H D+KP NIL+      R    I+D G A+L
Sbjct: 141 IHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 81.1 bits (201), Expect = 1e-16
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 29/203 (14%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           +G+GSFG V+    ++   +    A+K L    +        K E  ++ + +H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91

Query: 585 LGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARGLL 633
             +  + + +L L+ +FL  G L    F        L   + F          ++A  L 
Sbjct: 92  H-YAFQTEGKLYLILDFLRGGDL----F------TRLSKEVMFTEEDVKFYLAELALALD 140

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH   S  II+ D+KP+NILLD+  + +++DFGL+K    ++ KA   +  GT  Y+AP
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA--YSFCGTVEYMAP 195

Query: 694 EWFRNSTITAKVDVYSFGVLLLE 716
           E       T   D +SFGVL+ E
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFE 218

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 81.1 bits (201), Expect = 1e-16
 Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-------------KE 565
             ++   E+G G++G V+K      +     VA+K++ RV    E             + 
Sbjct: 11  QQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRH 67

Query: 566 FKNEVVVIGQTHHKNLVRLL----GFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSW 618
            +          H N+VRL         + + +L LV+E ++   L ++L          
Sbjct: 68  LE-------TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119

Query: 619 NLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
               ++ FQ+ RGL +LH      ++H D+KPQNIL+      +++DFGLA++ +   + 
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA- 175

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS 719
              T++  T  Y APE    S+    VD++S G +  E+  
Sbjct: 176 --LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 214

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 81.7 bits (202), Expect = 1e-16
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 33/223 (14%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK-----NEVVVIGQT 576
            ++G G F  V+    +   T    VA+K         +  E E K     N+     + 
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNT---HVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81

Query: 577 H--HKNLVRLLG-FCDEGQNRL---LVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQI 628
                ++++LL  F  +G N +   +V+E L    L + +         L     I+ Q+
Sbjct: 82  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQL 140

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDD------YYNARISDFGLAKLLTLNQSKAIRT 682
             GL Y+H  C   IIH DIKP+N+L++           +I+D G A     + + +I+ 
Sbjct: 141 LLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ- 197

Query: 683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
               T+ Y +PE    +      D++S   L+ E+I+    F+
Sbjct: 198 ----TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 81.7 bits (202), Expect = 2e-16
 Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 24/204 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKE-FKNEVVVIGQTHHKNLV 582
           +GRG+F  V     +     T  V A+K +    + + GE   F+ E  V+     + + 
Sbjct: 69  IGRGAFSEVA----VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           +L  F  + +N L LV E+   G L + L  FG   P+   R  +A +I   +  +H   
Sbjct: 125 QLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVH--- 179

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
               +H DIKP NILLD   + R++DFG    L  + +     A+ GT  Y++PE  +  
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAV 238

Query: 700 TITAKVDVY-------SFGVLLLE 716
                   Y       + GV   E
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYE 262

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 80.7 bits (200), Expect = 2e-16
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 25/163 (15%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN--------EV 570
             ++  + +G G F  VYK     T      VA+KK+ ++      E K+        E+
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQ---IVAIKKI-KL--GHRSEAKDGINRTALREI 63

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQ 627
            ++ +  H N++ LL       N  LV++F+    L   +      L PS +++      
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPS-HIKA-YMLM 120

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
             +GL YLH      I+H D+KP N+LLD+    +++DFGLAK
Sbjct: 121 TLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 20/162 (12%)

Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVV 572
           ++  FK  E++G G++  VYKG+  TT      VA+K++ ++  D E+   +    E+ +
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGV---YVALKEV-KL--DSEEGTPSTAIREISL 56

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN---GTLASFLFGNLKPSWNLRT--NIAFQ 627
           + +  H+N+VRL           LV+EF++N     + S   GN      L       +Q
Sbjct: 57  MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA 669
           + +GL + H     +I+H D+KPQN+L++     ++ DFGLA
Sbjct: 117 LLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLA 155

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 81.3 bits (201), Expect = 2e-16
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 28/205 (13%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKE-FKNEVVVIGQTHHKNLV 582
           +GRG+FG V     +    +   V A+K L    + +  E   F+ E  V+     K + 
Sbjct: 82  IGRGAFGEVA----VVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
            L   F D+  N L LV ++   G L + L    K    L   +A F   ++   +  +H
Sbjct: 138 TLHYAFQDD--NNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVIAIDSVH 192

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                  +H DIKP NIL+D   + R++DFG    L  + +     A+ GT  Y++PE  
Sbjct: 193 ---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEIL 248

Query: 697 RNSTITAK-----VDVYSFGVLLLE 716
           +             D +S GV + E
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYE 273

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 80.4 bits (199), Expect = 2e-16
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 56/228 (24%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
             +G G++G+V        +     VA+KK+   F+     +    E+ ++ +  H+N++
Sbjct: 33  SYIGEGAYGMVCSAYDNLNKVR---VAIKKIS-PFEHQTYCQRTLREIKILLRFRHENII 88

Query: 583 RLL-----GFCDEGQNRLLVYEF-------------LNNGTLASFLFGNLKPSWNLRTNI 624
            +         ++ ++  +V +              L+N  +  FL+             
Sbjct: 89  GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY------------- 135

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-TA 683
             QI RGL Y+H   SA ++H D+KP N+LL+   + +I DFGLA++   +       T 
Sbjct: 136 --QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT- 189

Query: 684 IRGTKGYVAPEWFR-------NSTITAKVDVYSFGVLLLEIISCRKSF 724
                 YVA  W+R       +   T  +D++S G +L E++S R  F
Sbjct: 190 -----EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 79.6 bits (197), Expect = 3e-16
 Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 21/159 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN----EVVVIG 574
           + +   +++G G++  VYKG    T      VA+K++    ++G          EV ++ 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDN---LVALKEIRLEHEEG---APCTAIREVSLLK 55

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARG 631
              H N+V L       ++  LV+E+L+   L  +L      +    N++    FQ+ RG
Sbjct: 56  DLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH-NVKL-FLFQLLRG 112

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK 670
           L Y H     +++H D+KPQN+L+++    +++DFGLA+
Sbjct: 113 LAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR 148

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 79.6 bits (197), Expect = 4e-16
 Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 41/224 (18%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKN----EVVVI 573
             ++   ++G+G+FG V+K     T      VA+KK+  +  + EKE F      E+ ++
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQ---KVALKKV-LM--ENEKEGFPITALREIKIL 70

Query: 574 GQTHHKNLVRLLGFCDEGQNRL--------LVYEFLNN---GTLAS----FLFGNLKPSW 618
               H+N+V L+  C    +          LV++F  +   G L++    F    +K   
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--- 127

Query: 619 NLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK 678
                +   +  GL Y+H     +I+H D+K  N+L+      +++DFGLA+  +L ++ 
Sbjct: 128 ----RVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180

Query: 679 AIR--TAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIIS 719
                T    T  Y  PE           +D++  G ++ E+ +
Sbjct: 181 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 80.1 bits (198), Expect = 4e-16
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKE-FKNEVVVIGQTHHKNLV 582
           +GRG+FG V     L    ST  V A+K L    + +  +   F  E  ++   +   +V
Sbjct: 77  IGRGAFGEVQ----LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           +L   F D+    L +V E++  G L + +     P    R   A ++   L  +H   S
Sbjct: 133 QLFYAFQDD--RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---S 186

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              IH D+KP N+LLD   + +++DFG    +         TA+ GT  Y++PE  ++  
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQG 245

Query: 701 ITAK----VDVYSFGVLLLE 716
                    D +S GV L E
Sbjct: 246 GDGYYGRECDWWSVGVFLYE 265

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 80.5 bits (199), Expect = 5e-16
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 34/214 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQTHHKNLV 582
           +G+G+FG   K VIL    +T    A+K L  + +    E      E  V+  + H  L 
Sbjct: 156 LGKGTFG---K-VILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 211

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARG 631
            L  +  +  +RL  V E+ N G L    F      ++L     F          +I   
Sbjct: 212 ALK-YSFQTHDRLCFVMEYANGGEL----F------FHLSRERVFSEDRARFYGAEIVSA 260

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           L YLH + +  +++ D+K +N++LD   + +I+DFGL K    + +        GT  Y+
Sbjct: 261 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGTPEYL 316

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           APE   ++     VD +  GV++ E++  R  F 
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 78.1 bits (193), Expect = 8e-16
 Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 53/206 (25%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNL 581
             + +G G  G V +      + +    A+K L         + + EV +  + +   ++
Sbjct: 22  TSQVLGLGINGKVLQI---FNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHI 73

Query: 582 VRLLGFCDEGQNR----LLVYEFLNNGTLASFLF------GNLKPSWNLRTNIAFQIARG 631
           VR++   +         L+V E L+ G     LF      G+   +    + I   I   
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGE----LFSRIQDRGDQAFTEREASEIMKSIGEA 129

Query: 632 LLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
           + YLH   S  I H D+KP+N+L          +++DFG AK  T              +
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------GE 173

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLL 714
            Y               D++S GV++
Sbjct: 174 KY-----------DKSCDMWSLGVIM 188

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 77.7 bits (192), Expect = 2e-15
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKE-FKNEVVVIGQTHHKNLV 582
           +G GSFG V     L     +    A+K L   +V +  + E   NE  ++   +   LV
Sbjct: 49  LGTGSFGRVM----LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLHED 638
           +L     +  N  +V E++  G +    F +L+         A F   QI     YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158

Query: 639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN 698
            S  +I+ D+KP+N+L+D     +++DFG AK     + K     + GT   +APE   +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEIILS 212

Query: 699 STITAKVDVYSFGVLLLE 716
                 VD ++ GVL+ E
Sbjct: 213 KGYNKAVDWWALGVLIYE 230

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 77.3 bits (191), Expect = 2e-15
 Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 37/215 (17%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQTHHKNLV 582
           +G+G+FG   K VIL    +T    A+K L  + +    E      E  V+  T H  L 
Sbjct: 13  LGKGTFG---K-VILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QIARG 631
            L  +  +  +RL  V E+ N G L    F      ++L     F          +I   
Sbjct: 69  ALK-YAFQTHDRLCFVMEYANGGEL----F------FHLSRERVFTEERARFYGAEIVSA 117

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGY 690
           L YLH   S  +++ DIK +N++LD   + +I+DFGL K      S         GT  Y
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEY 171

Query: 691 VAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD 725
           +APE   ++     VD +  GV++ E++  R  F 
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 76.0 bits (188), Expect = 5e-15
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 30/201 (14%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKE-FKNEVVVIGQTHHKNLV 582
           +G GSFG V+    L          A+K L  + V +  + E   +E +++    H  ++
Sbjct: 14  LGTGSFGRVH----LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 69

Query: 583 RLLG-FCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           R+ G F D    ++ ++ +++  G L    F  L+ S      +A F   ++   L YLH
Sbjct: 70  RMWGTFQDA--QQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEW 695
              S  II+ D+KP+NILLD   + +I+DFG AK +         T  + GT  Y+APE 
Sbjct: 124 ---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP------DVTYTLCGTPDYIAPEV 174

Query: 696 FRNSTITAKVDVYSFGVLLLE 716
                    +D +SFG+L+ E
Sbjct: 175 VSTKPYNKSIDWWSFGILIYE 195

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 73.7 bits (182), Expect = 3e-14
 Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEF---KNEVVVIGQTHHKNL 581
           +G+G +G V++   +T   +    A+K L    + ++  K+    K E  ++ +  H  +
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           V L+ +  +   +L L+ E+L+ G L    F  L+       + A F   +I+  L +LH
Sbjct: 84  VDLI-YAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLH 138

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 II+ D+KP+NI+L+   + +++DFGL K    + +        GT  Y+APE  
Sbjct: 139 ---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HTFCGTIEYMAPEIL 193

Query: 697 RNSTITAKVDVYSFGVLLLE 716
             S     VD +S G L+ +
Sbjct: 194 MRSGHNRAVDWWSLGALMYD 213

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 73.4 bits (181), Expect = 5e-14
 Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 26/223 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +G+GSFG   K V+L     T  + AVK L  D + QD + E    E  ++    +H  L
Sbjct: 31  LGKGSFG---K-VMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
            +L   C +  +RL  V EF+N G L      +++ S       A F   +I   L++LH
Sbjct: 87  TQLF-CCFQTPDRLFFVMEFVNGGDL----MFHIQKSRRFDEARARFYAAEIISALMFLH 141

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 II+ D+K  N+LLD   + +++DFG+ K    N          GT  Y+APE  
Sbjct: 142 ---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFCGTPDYIAPEIL 196

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTD 737
           +       VD ++ GVLL E++     F+ E  ++   AIL D
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 72.7 bits (179), Expect = 9e-14
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 24/209 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +G+GSFG   K V+L    +     AVK L    + +  E++   +E  V+ +   H  L
Sbjct: 46  IGKGSFG---K-VLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           V L  F  +  ++L  V +++N G L    F +L+         A F   +IA  L YLH
Sbjct: 102 VGLH-FSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAEIASALGYLH 156

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
              S  I++ D+KP+NILLD   +  ++DFGL K    + S    +   GT  Y+APE  
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPEVL 211

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFD 725
                   VD +  G +L E++     F 
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 72.3 bits (178), Expect = 1e-13
 Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 28/224 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +G+GSFG   K V+L+ R  T  + AVK L  D V QD + E    E  V+        L
Sbjct: 28  LGKGSFG---K-VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
            +L   C +  +RL  V E++N G L      +++     +   A F   +IA GL +L 
Sbjct: 84  TQLH-SCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEW 695
                 II+ D+K  N++LD   + +I+DFG+ K    N    + T    GT  Y+APE 
Sbjct: 139 SK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKTFCGTPDYIAPEI 192

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTD 737
                    VD ++FGVLL E+++ +  F+ E  +E   +I+  
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 236

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 73.5 bits (180), Expect = 1e-13
 Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 28/224 (12%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +G+GSFG   K V+L+ R  T  + AVK L  D V QD + E    E  V+        L
Sbjct: 349 LGKGSFG---K-VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
            +L   C +  +RL  V E++N G L      +++     +   A F   +IA GL +L 
Sbjct: 405 TQLH-SCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTA-IRGTKGYVAPEW 695
              S  II+ D+K  N++LD   + +I+DFG+ K    N    + T    GT  Y+APE 
Sbjct: 460 ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKTFCGTPDYIAPEI 513

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTD 737
                    VD ++FGVLL E+++ +  F+ E  +E   +I+  
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 557

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 42/231 (18%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF----KNEVVVIGQTHHK 579
           +G+GSFG   K V L     T    A+K L  D V  D + E     K   V+     H 
Sbjct: 25  LGKGSFG---K-VFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR--VLSLAWEHP 78

Query: 580 NLVRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIAF----------QI 628
            L  +     + +  L  V E+LN G L           +++++   F          +I
Sbjct: 79  FLTHMF-CTFQTKENLFFVMEYLNGGDL----M------YHIQSCHKFDLSRATFYAAEI 127

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
             GL +LH      I++ D+K  NILLD   + +I+DFG+ K   L  +K       GT 
Sbjct: 128 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTP 182

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTD 737
            Y+APE          VD +SFGVLL E++  +  F  +  EE  ++I  D
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 233

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 71.2 bits (175), Expect = 3e-13
 Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 21/213 (9%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEF--KNEVVVIGQT-HHKNL 581
           +G G++G V+    ++   +    A+K L    + Q  +     + E  V+        L
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           V L  +  + + +L L+ +++N G L    F +L        +       +I   L +LH
Sbjct: 122 VTLH-YAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALEHLH 176

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 II+ DIK +NILLD   +  ++DFGL+K    ++++       GT  Y+AP+  
Sbjct: 177 ---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDIV 232

Query: 697 RNSTI--TAKVDVYSFGVLLLEIISCRKSFDIE 727
           R         VD +S GVL+ E+++    F ++
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 71.1 bits (175), Expect = 3e-13
 Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 24/215 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +GRGS+    K V+L     T  + A+K +  + V  D + ++ + E  V  Q ++H  L
Sbjct: 17  IGRGSYA---K-VLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           V L   C + ++RL  V E++N G L      +++    L    A F   +I+  L YLH
Sbjct: 73  VGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLH 127

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 II+ D+K  N+LLD   + +++D+G+ K           +   GT  Y+APE  
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPNYIAPEIL 182

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           R       VD ++ GVL+ E+++ R  FDI    +
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 71.7 bits (176), Expect = 3e-13
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 39/211 (18%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK--NEVVVIGQTHHK 579
           + +G+GSFG V K            VA+K      R  +   +E +    +    + +  
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQH---VALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159

Query: 580 NLVRLLGFCD---------E--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
           N++ +L             E    N   +YE +       F       S  L    A  I
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMN---LYELIKKNKFQGF-------SLPLVRKFAHSI 209

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA--RISDFGLAKLLTLNQSKAIRTAIRG 686
            + L  LH     +IIHCD+KP+NILL     +  ++ DFG +          I+     
Sbjct: 210 LQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQ----- 261

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEI 717
           ++ Y APE    +     +D++S G +L E+
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAEL 292

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 70.8 bits (174), Expect = 4e-13
 Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAV-AVKKL--DRVFQDGEKEF-KNEVVVIGQ-THHKNL 581
           +GRGS+    K V+L     T  + A++ +  + V  D + ++ + E  V  Q ++H  L
Sbjct: 60  IGRGSYA---K-VLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115

Query: 582 VRLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKPSWNLRTNIA-F---QIARGLLYLH 636
           V L   C + ++RL  V E++N G L      +++    L    A F   +I+  L YLH
Sbjct: 116 VGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLH 170

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
           E     II+ D+K  N+LLD   + +++D+G+ K           +   GT  Y+APE  
Sbjct: 171 ER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPNYIAPEIL 225

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE 731
           R       VD ++ GVL+ E+++ R  FDI    +
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 19/201 (9%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK--NEVVVIGQTHHK 579
             +G+GSFG V K      +     VA+K            + E +    +         
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEW---VAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHE 637
            +V L        +  LV+E L+   L   L        +L      A Q+   LL+L  
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175

Query: 638 DCSAQIIHCDIKPQNILLDDYYNA--RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
                IIHCD+KP+NILL +   +  +I DFG +  L     + I+     ++ Y +PE 
Sbjct: 176 P-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ-----SRFYRSPEV 229

Query: 696 FRNSTITAKVDVYSFGVLLLE 716
                    +D++S G +L+E
Sbjct: 230 LLGMPYDLAIDMWSLGCILVE 250

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 65.3 bits (158), Expect = 2e-11
 Identities = 35/240 (14%), Positives = 65/240 (27%), Gaps = 69/240 (28%)

Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--------DRVFQDGEKEFKN 568
            T+  +  E++G G FG V++          T VA+K +        +   Q   +E   
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQT-----IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILP 72

Query: 569 EVVV---------IGQTHHKNLVRLLGFC------------------------------D 589
           E+++               +  + L                                   
Sbjct: 73  EIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFF 132

Query: 590 EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIK 649
           +     +V EF   G     +   L  S     +I  Q+   L         +  H D+ 
Sbjct: 133 KDDQLFIVLEFEFGGIDLEQMRTKL-SSLATAKSILHQLTASLAVAEASL--RFEHRDLH 189

Query: 650 PQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGY-VAPEWFRNSTITAKVDVY 708
             N+LL      ++      K  T+            + G  V+   +  S +     V 
Sbjct: 190 WGNVLLKKTSLKKLHYTLNGKSSTI-----------PSCGLQVSIIDYTLSRLERDGIVV 238

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 63.5 bits (153), Expect = 5e-11
 Identities = 43/272 (15%), Positives = 73/272 (26%), Gaps = 40/272 (14%)

Query: 24  AQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTV 83
                 +P   TL+AG      LSP+  F    +      + N    L I  +       
Sbjct: 11  GVGTSVLPAYQTLSAG---QYLLSPNQRFKLLLQ-----GDGN----LVIQDNGATVWVA 58

Query: 84  VWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT------VAVGHMND 137
                     P   + + +     +G  L+D   ++VW ++    T           + D
Sbjct: 59  NEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQD 118

Query: 138 TGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGN 197
            GN VL  S +              +    +     L           G  +     DGN
Sbjct: 119 DGNIVLVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGA---GASKLVFQGDGN 175

Query: 198 LVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESV 257
           LV    N        A + +GT           R +F   G + +           + + 
Sbjct: 176 LVAYGPN------GAATWNAGT-----QGKGAVRAVFQGDGNLVVYGAGNAVL-WHSHT- 222

Query: 258 VPAADFYYRATLNFDGVFAQYFYPKNGNENWS 289
                      L  +G  A      +    W+
Sbjct: 223 --GGHASAVLRLQANGSIAIL----DEKPVWA 248

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 26/179 (14%), Positives = 44/179 (24%), Gaps = 10/179 (5%)

Query: 147 SSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLP 206
           +           +  L   QT+   Q L S          RF+  L  DGNLV+      
Sbjct: 2   AGRTRIPFNGVGTSVLPAYQTLSAGQYLLS-------PNQRFKLLLQGDGNLVIQDNGAT 54

Query: 207 TGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYR 266
              A +      +  P  +  +          ++    R        +            
Sbjct: 55  VWVA-NEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTH 113

Query: 267 ATLNFDGVFAQYFYPK--NGNENWSVAWSEPENICVNIGGEMGSGACGFNSICSLDSDR 323
             L  DG           NG     +     +++ +  G E+  G         L    
Sbjct: 114 LVLQDDGNIVLVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGAGASKLVFQG 172

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 7/82 (8%)

Query: 79  PAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDT 138
           P     W    + +        +     D  LV+       +W S       AV  +   
Sbjct: 181 PNGAATWNAGTQGKG-----AVRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQAN 235

Query: 139 GNFVLASSSSSKLWDSFSNPSD 160
           G+  +       +W  F     
Sbjct: 236 GSIAILDEKP--VWARFGFQPT 255

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 64.2 bits (156), Expect = 6e-11
 Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 65/211 (30%)

Query: 578 HKNLVRLLG-FCDEGQN---RLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIAR 630
            + +V+LL  F   G N     +V+E L +  L  ++        P   ++  I  Q+ +
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKK-IIQQVLQ 157

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILL--DDYY----------------------------- 659
           GL YLH  C  +IIH DIKP+NILL  ++ Y                             
Sbjct: 158 GLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 215

Query: 660 ------------------NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI 701
                               +I+D G A  +  + ++ I+     T+ Y + E    S  
Sbjct: 216 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQ-----TRQYRSLEVLIGSGY 270

Query: 702 TAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 732
               D++S   +  E+ +    F+   GEEY
Sbjct: 271 NTPADIWSTACMAFELATGDYLFEPHSGEEY 301

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 63.2 bits (154), Expect = 9e-11
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 20/155 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
           +++G G+FG +  G  L T      VA+K   +         E++    +        + 
Sbjct: 15  KKIGCGNFGELRLGKNLYTNEY---VAIKLEPMKSRAPQLHLEYRFYKQLGSGDG---IP 68

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCS 640
           ++  F   G+   +V E L  G     LF     +++L+T   IA Q+   + Y+H   S
Sbjct: 69  QVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---S 123

Query: 641 AQIIHCDIKPQNILLDDYYNAR-----ISDFGLAK 670
             +I+ D+KP+N L+    N       I DF LAK
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVK--KLDRVFQDGEKEFKNEVVVIGQT 576
            ++K    +G GSFG++++G  L        VA+K             E++   ++ G T
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQ---QVAIKFEPRRSDAPQLRDEYRTYKLLAGCT 66

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLY 634
               +  +  F  EG + +LV + L  G     L       ++++T    A Q+   +  
Sbjct: 67  G---IPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 121

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNAR-----ISDFGLAK 670
           +H      +++ DIKP N L+    +       + DFG+ K
Sbjct: 122 IH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 62.0 bits (151), Expect = 3e-10
 Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 71/237 (29%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK-----NEVVVIGQT 576
            ++G G+FG V     +  +      AVK    + +  +  + E                
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKY---YAVKVVRNIKKYTRSAKIEADILKKIQN----DDI 93

Query: 577 HHKNLVRLLGFCD---------E--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIA 625
           ++ N+V+  G            E  G +   +YE +       F                
Sbjct: 94  NNNNIVKYHGKFMYYDHMCLIFEPLGPS---LYEIITRNNYNGF-------HIEDIKLYC 143

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQSKAIRTA 683
            +I + L YL +     + H D+KP+NILLDD  +  + I+   +     +   +   T 
Sbjct: 144 IEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200

Query: 684 IR----G--------------TKGYVAPE------WFRNSTITAKVDVYSFGVLLLE 716
           I+    G              T+ Y APE      W          D++SFG +L E
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGW------DVSSDMWSFGCVLAE 251

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 61.2 bits (149), Expect = 5e-10
 Identities = 46/228 (20%), Positives = 82/228 (35%), Gaps = 57/228 (25%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK--NEVVVIGQTHHK 579
             +G G+FG V +   L      + VA+K    + +  +    E     ++    + +  
Sbjct: 25  GNLGEGTFGKVVE--CLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF 82

Query: 580 NLVRLLGFCD---------E--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
             V +  + +         E  G+N    +EFL       +             ++A+Q+
Sbjct: 83  LCVLMSDWFNFHGHMCIAFELLGKN---TFEFLKENNFQPY-------PLPHVRHMAYQL 132

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR------- 681
              L +LHE    Q+ H D+KP+NIL  +     + +   +      ++ +IR       
Sbjct: 133 CHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189

Query: 682 -------TAIRGTKGYVAPE------WFRNSTITAKVDVYSFGVLLLE 716
                  T I  T+ Y  PE      W          DV+S G +L E
Sbjct: 190 TFDHEHHTTIVATRHYRPPEVILELGW------AQPCDVWSIGCILFE 231

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 60.9 bits (148), Expect = 5e-10
 Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 26/165 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTA-----VAVK------KLDRVFQDGEKEFKNEVVVIGQ 575
             R + GI+Y+    +T T  +       ++K      +L       ++  K   V   +
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 576 THHKNLV----RLLGF-CDEGQNRLLVYEFLNNGT-LASFLFGNLKPSWNLRT--NIAFQ 627
             +   +      +GF   + + R LV   L  G  L S L  + K   + R+   +A +
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACR 167

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI--SDFGLAK 670
           +   L +LH     + +H ++  +NI +D    +++  + +G A 
Sbjct: 168 LLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 60.8 bits (148), Expect = 6e-10
 Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 31/173 (17%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVK---KLDRVFQDGEKEFK--NEVVVIGQTHHK 579
           + +G G+FG V + +    +     VAVK    +DR  +    E +    +         
Sbjct: 20  DTLGEGAFGKVVECIDH--KAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTF 77

Query: 580 NLVRLLGFCD---------E--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
             V++L + +         E  G +    Y+F+       F         +    +A+QI
Sbjct: 78  RCVQMLEWFEHHGHICIVFELLGLS---TYDFIKENGFLPF-------RLDHIRKMAYQI 127

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
            + + +LH     ++ H D+KP+NIL          +  + +      +  I+
Sbjct: 128 CKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK 177

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVR 583
            ++G GSFG +Y G  +        VA+K      +    +   E  +         +  
Sbjct: 15  RKIGSGSFGDIYLGTDIAAGE---EVAIKLECV--KTKHPQLHIESKIYKMMQGGVGIPT 69

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYLHEDCSA 641
           +     EG   ++V E L  G     LF      ++L+T   +A Q+   + Y+H   S 
Sbjct: 70  IRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SK 124

Query: 642 QIIHCDIKPQNILLDDYYNA---RISDFGLAK 670
             IH D+KP N L+          I DFGLAK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.1 bits (142), Expect = 5e-09
 Identities = 78/594 (13%), Positives = 171/594 (28%), Gaps = 183/594 (30%)

Query: 341 RYGSCKPDFELSCWGGGQGYKKELFDFHELQ-LTNWHLSDSERFRPYNEVQCKNSC--LS 397
           +Y      FE         +    FD  ++Q +    LS  E           +    L 
Sbjct: 17  QYKDILSVFE-------DAFVDN-FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68

Query: 398 DCFC-----AAVIF-----QDDCCWFKKLPLSNGMTDGRLTSKAFMKYKNK--GDDPP-- 443
                        F     + +  +    P+        + ++ +++ +++   D+    
Sbjct: 69  WTLLSKQEEMVQKFVEEVLRINYKFLMS-PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127

Query: 444 --SVPRPPDPEDKKKRKM-------------MNATG-SVLLGSSVFVNFALVCAFGLSFF 487
             +V R   P  K ++ +             +  +G + +    V +++ + C      F
Sbjct: 128 KYNVSRL-QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA-LDVCLSYKVQCKMD---F 182

Query: 488 FIYKKKWI----RNSPGD---------GTIETNL--PCFSYKELEEATDNFKEEVGR--- 529
            I+   W+     NSP             I+ N          ++    + + E+ R   
Sbjct: 183 KIF---WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 530 --------------------GSFGIVYKGVILTTR----------TSTTAVAVKKLDRVF 559
                                +F +  K ++LTTR           +TT +++       
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCK-ILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 560 QDGE-------------KEFKNEVVVIGQTHHKNLVRLLG-FCDEGQNRLLVYEFLNNGT 605
              E             ++   EV+    T +   + ++     +G      ++ +N   
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVL----TTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 606 LASFL---FGNLKPSWNLRTN-----IAFQ----IARGLL--------------YLHEDC 639
           L + +      L+P+   R       + F     I   LL               +++  
Sbjct: 355 LTTIIESSLNVLEPA-EYRKMFDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              ++    K   I +   Y        L   + L    A+  +I     Y  P+ F + 
Sbjct: 413 KYSLVEKQPKESTISIPSIY--------LELKVKLENEYALHRSIVDH--YNIPKTFDSD 462

Query: 700 TITA-KVDVYSFGVL---LLEIISCRKSFDIEMGEEYAILTDWAFDCYR--NEKL----- 748
            +    +D Y +  +   L          +IE  E   +      D +R   +K+     
Sbjct: 463 DLIPPYLDQYFYSHIGHHL---------KNIEHPERMTLFRMVFLD-FRFLEQKIRHDST 512

Query: 749 -DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL 801
             +     +  L  +K  +  +         DP     +  +L  L  + E  +
Sbjct: 513 AWNASGSILNTLQQLKFYKPYI------CDNDPKYERLVNAILDFLPKIEENLI 560

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 5e-05
 Identities = 49/320 (15%), Positives = 96/320 (30%), Gaps = 88/320 (27%)

Query: 552 VKKLD-RVFQDGEKE-FKNEVV--VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLA 607
           V   D +  QD  K     E +  +I      +    L +    +   +V +F+      
Sbjct: 30  VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI 89

Query: 608 SFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG 667
           ++ F  L             + R  +   +      ++ D +        Y  +R+  + 
Sbjct: 90  NYKF--LMSPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQV----FAKYNVSRLQPYL 138

Query: 668 LAK--LLTLNQSKAIRTAIRGTKGY----VAPEWFRNSTITAKVDVYSFGVLLLEIISCR 721
             +  LL L  +K +   I G  G     VA +   +  +  K+D   F +  L + +C 
Sbjct: 139 KLRQALLELRPAKNV--LIDGVLGSGKTWVALDVCLSYKVQCKMD---FKIFWLNLKNCN 193

Query: 722 KSFDI-EM------------------GEEYAILTDWAFDCYRN---EK--------LDDL 751
               + EM                       +         R     K        L + 
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN- 252

Query: 752 VEGDMEALN--DIKCVEKLVMVS----------------IWCIQEDPSLRPTMKKVLQML 793
           V+ + +A N  ++ C  K+++ +                I       +L  T  +V  +L
Sbjct: 253 VQ-NAKAWNAFNLSC--KILLTTRFKQVTDFLSAATTTHISLDHHSMTL--TPDEVKSLL 307

Query: 794 EGVVEVS---LPP-----NP 805
              ++     LP      NP
Sbjct: 308 LKYLDCRPQDLPREVLTTNP 327

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 57.7 bits (139), Expect = 9e-09
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           + F+   ++G GSFG +Y G  + T      VA+K  +   +    +   E  +      
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNE---EVAIKLENV--KTKHPQLLYESKIYRILQG 61

Query: 579 KNLV-RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQIARGLLYL 635
              +  +  F  EG   +LV + L  G     LF       +L+T   +A Q+   + ++
Sbjct: 62  GTGIPNVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 119

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNAR---ISDFGLAK 670
           H   S   +H DIKP N L+     A    I DFGLAK
Sbjct: 120 H---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 27/164 (16%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFK-----NEVVVIGQTHHKNL 581
           +G G FG++Y               VK   +       E K      +   I +   +  
Sbjct: 45  IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104

Query: 582 VRLLGF----------CDEGQNRLLVYEFLNNGT-LASFLFGNLKPSWNLRT--NIAFQI 628
           +  LG                 R +V E L  G  L      N        T   +  ++
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKISGQNGTFK--KSTVLQLGIRM 160

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI--SDFGLAK 670
              L Y+H     + +H DIK  N+LL      ++  +D+GL+ 
Sbjct: 161 LDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSY 201

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 29/165 (17%), Positives = 67/165 (40%), Gaps = 26/165 (15%)

Query: 527 VGRGSFGIVYKGVILTTRTSTTA--VAVKKL----------DRVFQD-GEKEFKNEVVVI 573
           +G+G FG +Y   + ++ +  +     VK             + +Q   + E   + +  
Sbjct: 43  IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102

Query: 574 GQTHHKNLVRLLGFCDEGQN----RLLVYEFLNNGTLASFLFGNLKPSWNLRT--NIAFQ 627
            +  +  + +  G     +N    R ++ +    G+    ++      ++ +T   ++ +
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSLR 160

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI--SDFGLAK 670
           I   L Y+H     + +H DIK  N+LL+     ++   D+GLA 
Sbjct: 161 ILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 28/135 (20%), Positives = 42/135 (31%), Gaps = 30/135 (22%)

Query: 159 SDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG 218
           SD L  G  ++T   L           G + F +  D NLVL   N        A + SG
Sbjct: 1   SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDNN-------RAVWASG 44

Query: 219 TYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQY 278
           T        SG  +     G + I   +   +   T       +  Y   L  D     Y
Sbjct: 45  TN----GKASGCVLKMQNDGNLVIYSGSRAIWASNT----NRQNGNYYLILQRDRNVVIY 96

Query: 279 FYPKNGNENWSVAWS 293
                 + + +  W+
Sbjct: 97  ------DNSNNAIWA 105

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 25/128 (19%)

Query: 33  GATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQ 92
             +L  G      L     +              D     + Y +      VW ++    
Sbjct: 7   PNSLFTGH----SLEVGPSYRLIM--------QGDCNF--VLYDS---GKPVWASNTGGL 49

Query: 93  NPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVG-HMNDTGNFVLASSSSSKL 151
                 G ++ L  +  LV+ D   + +W ++ +         +    N V+       +
Sbjct: 50  GS----GCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVI---YGPVV 102

Query: 152 WDSFSNPS 159
           W + S P+
Sbjct: 103 WATGSGPA 110

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 27/98 (27%)

Query: 104 LTADHGLVLNDPQGKQVWSSEID-IGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTL 162
           +  D   VL D  GK VW+S    +G+     +++ GN V+   S+  +W          
Sbjct: 26  MQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIW---------- 74

Query: 163 LPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVL 200
                          +++TN     +   L +D N+V+
Sbjct: 75  ---------------QTKTNGKEDHYVLVLQQDRNVVI 97

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 31/146 (21%), Positives = 42/146 (28%), Gaps = 32/146 (21%)

Query: 159 SDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG 218
            + LL GQT+     L +         G +   +    NLV               + S 
Sbjct: 2   DNVLLSGQTLHADHSLQA---------GAYTLTIQNKCNLVKY-------QNGRQIWASN 45

Query: 219 TYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQY 278
           T        SG R+     G + I   N    +    S     +  Y   L  DG F  Y
Sbjct: 46  TD----RRGSGCRLTLLSDGNLVIYDHNN---NDVWGSACWGDNGKYALVLQKDGRFVIY 98

Query: 279 FYPKNGNENWSVAWSEPENICVNIGG 304
                      V WS   N C  + G
Sbjct: 99  ---------GPVLWSLGPNGCRRVNG 115

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 25/126 (19%), Positives = 39/126 (30%), Gaps = 22/126 (17%)

Query: 33  GATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQ 92
              L A   S   L  +  + F   Q D      +L L    Y N      +W T+    
Sbjct: 14  PQILHAT-ESLEILFGTHVYRFIM-QTD-----CNLVL----YDN---NNPIWATNTGGL 59

Query: 93  NPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVG-HMNDTGNFVLASSSSSKL 151
                 G +  L  D  LV+   +   VW S +          +    N V+   +   L
Sbjct: 60  GN----GCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGDA---L 112

Query: 152 WDSFSN 157
           W + + 
Sbjct: 113 WATQTV 118

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 42.2 bits (99), Expect = 7e-05
 Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 29/135 (21%)

Query: 67  DLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEID 126
           +  + S    +   + +  +     +        +  +  D  LVL D     +W++   
Sbjct: 1   NNIIFSKQPDDNHPQIL--HATESLEILFGTHVYRFIMQTDCNLVLYD-NNNPIWATNTG 57

Query: 127 -IGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSR 185
            +G      +   G  V+ ++ +  +W                         +S      
Sbjct: 58  GLGNGCRAVLQPDGVLVVITNENVTVW-------------------------QSPVAGKA 92

Query: 186 GRFQFRLLKDGNLVL 200
           G +   L  D N+V+
Sbjct: 93  GHYVLVLQPDRNVVI 107

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 80  AKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDT 138
             T VW ++         +G +  L +D   V+ D +G+ +W+S    G    V  + + 
Sbjct: 36  HSTSVWASN---TGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQED 92

Query: 139 GNFVLASSSSSKLWDSFSN 157
           GN V+     S +W + + 
Sbjct: 93  GNVVI---YGSDIWSTGTY 108

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 27/130 (20%)

Query: 160 DTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT 219
           + L  G+ +   Q L             + F + +D NLVL          YD       
Sbjct: 2   NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVL----------YDHSTSVWA 42

Query: 220 YDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYF 279
            +       G + +    G   +    G        S     +  Y   L  DG    Y 
Sbjct: 43  SNTGILGKKGCKAVLQSDGNFVVYDAEGRSL---WASHSVRGNGNYVLVLQEDGNVVIY- 98

Query: 280 YPKNGNENWS 289
               G++ WS
Sbjct: 99  ----GSDIWS 104

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 22/100 (22%), Positives = 32/100 (32%), Gaps = 28/100 (28%)

Query: 103 KLTADHGLVLNDPQGKQVWSSEIDIGTVAVGH--MNDTGNFVLASSSSSKLWDSFSNPSD 160
            +  D  LVL D     VW+S   I         +   GNFV+  +    LW S      
Sbjct: 24  IMQEDCNLVLYDH-STSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWAS------ 76

Query: 161 TLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVL 200
                               +    G +   L +DGN+V+
Sbjct: 77  -------------------HSVRGNGNYVLVLQEDGNVVI 97

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 31/131 (23%)

Query: 159 SDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG 218
           ++ LL GQT++T+  L +         G F   +  D NLVL          Y+  + S 
Sbjct: 3   TNYLLSGQTLDTEGHLKN---------GDFDLVMQDDCNLVL----------YNGNWQSN 43

Query: 219 TYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQY 278
           T +    +    ++   + G + I   +G       +S   +    Y A ++ DG    +
Sbjct: 44  TAN----NGRDCKLTLTDYGELVIKNGDGSTV---WKSGAQSVKGNYAAVVHPDGRLVVF 96

Query: 279 FYPKNGNENWS 289
                G   + 
Sbjct: 97  -----GPSVFK 102

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 25/97 (25%)

Query: 104 LTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLL 163
           +  D  LVL D   +   ++    GT     +   G   + ++ +  +W S ++ S    
Sbjct: 156 METDCNLVLFDRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSA--- 212

Query: 164 PGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVL 200
                                 GR+ F L  D NL +
Sbjct: 213 ----------------------GRYVFVLQPDRNLAI 227

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	813
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.82
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.82
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.81
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.8
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.79
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.77
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.73
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.67
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.66
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.63
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.62
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.61
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.6
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.57
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.55
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.47
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.45
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.31
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.29
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.26
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.25
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.2
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.1
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.08
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.05
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.03
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.8
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.75
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.49
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.08
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.04
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.86
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.84
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.82
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.79
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.34
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.25
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.99
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.88
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.84
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.32
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.04
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.01
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.99
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.94
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.79
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.76
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.48
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	94.79
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.45
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.88
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.92
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	87.09
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	85.67
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	83.99
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	80.97
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	80.21

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.7e-52  Score=442.39  Aligned_cols=269  Identities=26%  Similarity=0.388  Sum_probs=217.9

Q ss_pred             CHHHHHHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEe
Q 045343          512 SYKELEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFC  588 (813)
Q Consensus       512 ~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~  588 (813)
                      +++|+..++.+|.++||+|+||+||+|.+..  ...+++.||||+++.... ...++|.+|+.++++++|||||+++|+|
T Consensus        19 ~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~   98 (308)
T 4gt4_A           19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV   98 (308)
T ss_dssp             CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence            3445556677899999999999999998743  223568899999975433 2346799999999999999999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      .+++..+||||||++|+|.++|...                ..++|..+++|+.|||+||+|||+.   +|+||||||+|
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~N  175 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRN  175 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccc
Confidence            9999999999999999999999642                3578999999999999999999954   99999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      |||++++.+||+|||+|+...............||++|||||++.+..++.++|||||||+||||+| |+.||......+
T Consensus       176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~  255 (308)
T 4gt4_A          176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD  255 (308)
T ss_dssp             EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred             eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999998765444333455679999999999999999999999999999999999 899997554322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                         +..    .+..+...         +.+..++..+.+|+.+||+.||.+||||.||+++|+....+
T Consensus       256 ---~~~----~i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl  307 (308)
T 4gt4_A          256 ---VVE----MIRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL  307 (308)
T ss_dssp             ---HHH----HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred             ---HHH----HHHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence               111    11111111         11224567899999999999999999999999999986543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.9e-51  Score=441.65  Aligned_cols=261  Identities=25%  Similarity=0.413  Sum_probs=207.2

Q ss_pred             HhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.++||+|+||+||+|.+..  ...++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV  121 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV  121 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            34567899999999999998753  2346789999999876666667899999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEE
Q 045343          598 YEFLNNGTLASFLFGN---------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR  662 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~k  662 (813)
                      ||||++|+|.++|+..               ..++|..+++|+.|||+||+|||+   .+|+||||||+||||++++.+|
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~K  198 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVK  198 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEE
Confidence            9999999999999653               358999999999999999999995   4999999999999999999999


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||+|+.+.............||+.|||||++.+..++.++|||||||+||||+| |+.||......+.   ...+. 
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~~i~-  274 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---IDCIT-  274 (329)
T ss_dssp             ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---HHHHH-
T ss_pred             EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---HHHHH-
Confidence            999999998765444333455679999999999999999999999999999999999 8999975443221   11111 


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                         .+.         +...+..+++.+.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus       275 ---~g~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          275 ---QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             ---HTC---------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ---cCC---------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence               111         0011223467889999999999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=8e-52  Score=439.89  Aligned_cols=262  Identities=24%  Similarity=0.438  Sum_probs=214.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.++||+|+||+||+|.+..  .+.++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            345678999999999999998753  224578899999987666667789999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          597 VYEFLNNGTLASFLFGN-------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      |||||++|+|.++|...             ..++|..+++|+.|||+||+|||+.   +|+||||||+||||+.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence            99999999999999653             3689999999999999999999964   9999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||+|+...............||+.|||||++.+..++.++|||||||+||||+| |+.||......+.   ...    
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~~----  242 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---IEC----  242 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---HHH----
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHH----
Confidence            99999987665443332334568999999999999999999999999999999999 8999976543221   111    


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      +..+...         ..+..+++.+.+|+.+||+.||++||||+||++.|+.+.+.
T Consensus       243 i~~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          243 ITQGRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            1111111         11223467899999999999999999999999999987543

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=8.9e-50  Score=424.15  Aligned_cols=263  Identities=28%  Similarity=0.405  Sum_probs=202.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.++||+|+||+||+|.+.      ..||||+++...  ....++|.+|+.+|++++|||||+++|+|.+ +..+||
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV  109 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWH------GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV  109 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESS------SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEEC------CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence            3467899999999999999763      248999986432  2334679999999999999999999999865 568999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||++|+|.++|... ..++|..+++|+.|||+||+|||+.   +|+||||||+||||++++.+||+|||+|+......
T Consensus       110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred             EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence            9999999999999764 5799999999999999999999964   99999999999999999999999999998765443


Q ss_pred             ccceeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .........||+.|||||++.+   .+++.++|||||||+||||+||+.||..........      .....+    ...
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~------~~~~~~----~~~  256 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII------FMVGRG----YAS  256 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------HHHHTT----CCC
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH------HHHhcC----CCC
Confidence            3332455689999999999964   358999999999999999999999997544322111      111111    111


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPN  804 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~  804 (813)
                      +.+. .....+++.+.+|+.+||+.||++||||.||+++|+.+. -+.|+.
T Consensus       257 p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~-~~lpk~  305 (307)
T 3omv_A          257 PDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ-HSLPKI  305 (307)
T ss_dssp             CCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH-TTCCC-
T ss_pred             CCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh-ccCCCC
Confidence            1111 112245678899999999999999999999999998664 334544

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.3e-48  Score=416.25  Aligned_cols=249  Identities=26%  Similarity=0.351  Sum_probs=209.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVR---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cEEeEEeecCcCeEEEEEEEC---CCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            667789999999999999874   46789999999876666667799999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +++|+|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+|+.+......  
T Consensus       153 ~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~--  226 (346)
T 4fih_A          153 LEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--  226 (346)
T ss_dssp             CTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--
T ss_pred             CCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc--
Confidence            999999999865 4689999999999999999999964   9999999999999999999999999999987644322  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....+||+.|||||++.+..++.++|||||||++|||++|+.||......+..   ..+..    ..     .+.+.  .
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~~----~~-----~~~~~--~  292 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRD----NL-----PPRLK--N  292 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHHH----SS-----CCCCS--C
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHHc----CC-----CCCCC--c
Confidence            34578999999999999999999999999999999999999999765432211   11111    10     01111  1


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....++.+.+|+.+||+.||++|||+.|++++
T Consensus       293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            12345788999999999999999999999875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1e-48  Score=425.04  Aligned_cols=266  Identities=25%  Similarity=0.368  Sum_probs=214.6

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeecccc-CCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~  591 (813)
                      +....+++.++||+|+||+||+|......  ...+.||||+++.... ...++|.+|+++|.+++| ||||+++|+|.+.
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~  140 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  140 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence            44456778899999999999999886432  2457899999975433 234579999999999965 8999999999764


Q ss_pred             -CceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEE
Q 045343          592 -QNRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNIL  654 (813)
Q Consensus       592 -~~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIl  654 (813)
                       +..+||||||++|+|.++|+..                ..++|..++.++.|||+||+|||+   .+||||||||+|||
T Consensus       141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NIL  217 (353)
T 4ase_A          141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL  217 (353)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCcccee
Confidence             5689999999999999999642                347899999999999999999995   49999999999999


Q ss_pred             EcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhh
Q 045343          655 LDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYA  733 (813)
Q Consensus       655 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~  733 (813)
                      |++++.+||+|||+|+.+..+..........||+.|||||++.+..++.++|||||||+||||+| |+.||......+. 
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-  296 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-  296 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-
Confidence            99999999999999998765544433455679999999999999999999999999999999998 9999975433221 


Q ss_pred             hhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       734 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                       +    ...+..+..         ...+..+++++.+++.+||+.||.+|||+.||+++|+.+++.
T Consensus       297 -~----~~~i~~g~~---------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          297 -F----CRRLKEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             -H----HHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -H----HHHHHcCCC---------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence             1    111111111         111123457889999999999999999999999999987654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=9.9e-48  Score=412.30  Aligned_cols=251  Identities=23%  Similarity=0.231  Sum_probs=203.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +.+.++||+|+||+||+|...   ..++.||||+++..     ....+|+.++++++|||||++++++.+++..+|||||
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~---~~g~~vAiK~i~~~-----~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDK---QTGFQCAVKKVRLE-----VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETT-----TCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eEeCcEeccCCCeEEEEEEEC---CCCCEEEEEEECHH-----HhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            456678999999999999874   46789999999742     2335799999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++|+|.++|.....+++..+..++.||+.||+|||+   .+|+||||||+||||+.++ ++||+|||+|+.+..+....
T Consensus       132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            9999999999988899999999999999999999994   5999999999999999887 69999999999876543211


Q ss_pred             ---eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          680 ---IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       680 ---~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                         .....+||+.|||||++.+..++.++|||||||+||||++|+.||......+...   .+.   .. ..      ..
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~i~---~~-~~------~~  275 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL---KIA---SE-PP------PI  275 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH---HHH---HS-CC------GG
T ss_pred             ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHH---cC-CC------Cc
Confidence               1233579999999999999999999999999999999999999997544322111   010   00 00      00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                       .......+..+.+++.+||+.||.+|||+.|++++|...
T Consensus       276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence             011223467889999999999999999999999888653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.7e-48  Score=405.52  Aligned_cols=248  Identities=27%  Similarity=0.416  Sum_probs=198.7

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec----CCceE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----GQNRL  595 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~  595 (813)
                      .|.++||+|+||+||+|...   ..+..||||++....  ....+.|.+|+++|++++|||||++++++.+    +...+
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~  105 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEEC---CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEE
Confidence            56678999999999999874   467899999996532  2234568999999999999999999999864    34579


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~  674 (813)
                      ||||||++|+|.+++.....+++..+..++.||+.||+|||+. ..+|+||||||+||||+ .++.+||+|||+|+....
T Consensus       106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            9999999999999999888999999999999999999999965 23499999999999998 478999999999986543


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..    ....+||+.|||||++.+ +++.++|||||||+||||+||+.||........  +    ......+.....   
T Consensus       185 ~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~----~~~i~~~~~~~~---  250 (290)
T 3fpq_A          185 SF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--I----YRRVTSGVKPAS---  250 (290)
T ss_dssp             TS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--H----HHHHTTTCCCGG---
T ss_pred             Cc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--H----HHHHHcCCCCCC---
Confidence            22    345689999999999875 699999999999999999999999975432211  1    111111111000   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .....++.+.+|+.+||+.||++|||++|++++
T Consensus       251 -----~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          251 -----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -----CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 111224568899999999999999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.1e-47  Score=410.58  Aligned_cols=267  Identities=21%  Similarity=0.271  Sum_probs=201.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC----ceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----NRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~l  596 (813)
                      +.+.++||+|+||+||+|.+     .++.||||+++... .....+..|+..+.+++|||||+++++|.+++    ..+|
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~-----~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE-----TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            45678999999999999987     56789999997532 22223456777888999999999999997654    5799


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-----SAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      |||||++|+|.++|+.. .++|..+.+++.|+++||+|||+++     .++|+||||||+||||+.++++||+|||+|+.
T Consensus        79 V~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            99999999999999754 5899999999999999999999642     45899999999999999999999999999987


Q ss_pred             cccCccc--ceeecccccccccCcccccCC------CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh--------h
Q 045343          672 LTLNQSK--AIRTAIRGTKGYVAPEWFRNS------TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI--------L  735 (813)
Q Consensus       672 ~~~~~~~--~~~~~~~gt~~y~aPE~l~~~------~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~--------l  735 (813)
                      .......  .......||+.|||||++.+.      .++.++|||||||+||||+||+.|+..........        .
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            7544321  112345799999999999764      36779999999999999999988875432211000        0


Q ss_pred             HHHHHHhhccCcccccccccccc-cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEA-LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ...........    ..++.+.. ....+..+.+.+|+.+||+.||++||||.||+++|+++.+
T Consensus       238 ~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          238 VEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            00111111111    11122211 1233567889999999999999999999999999988754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=5.4e-48  Score=409.36  Aligned_cols=248  Identities=22%  Similarity=0.282  Sum_probs=209.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|++.++||+|+||+||+|...   .+++.||||++++.   .....+.+.+|+++|++++|||||++++++.+++..+|
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~---~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLAREL---ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEEEEecccCeEEEEEEEC---CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            3788899999999999999874   46789999999753   22344678999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+|+.+....
T Consensus       110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            999999999999999888999999999999999999999964   99999999999999999999999999999876554


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ........+||+.|||||++.+..++.++||||+||+||||++|+.||......+.   ...+.    ....        
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~~~i~----~~~~--------  251 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI---FAKII----KLEY--------  251 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHH----HTCC--------
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH----cCCC--------
Confidence            44334567899999999999999999999999999999999999999976543221   11111    1111        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                      ..  +...++.+.+|+.+||+.||.+|||++|++
T Consensus       252 ~~--p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 DF--PEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CC--CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CC--CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            00  112346788999999999999999999863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-47  Score=413.83  Aligned_cols=249  Identities=21%  Similarity=0.318  Sum_probs=200.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++...  ....+++.+|+++|++++|||||++++++.+++..+||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKST---EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CEEEEEEC------CEEEEEET---TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            4778899999999999999874   467899999997532  22345789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++|+|.++|...  ..+++..++.++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+|+.+...
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            9999999999999654  4568899999999999999999964   9999999999999999999999999999977543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  ....+||+.|||||++.+..++.++|||||||+||||++|+.||......+..      ..... +....     
T Consensus       179 ~~~--~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~------~~i~~-~~~~~-----  244 (350)
T 4b9d_A          179 VEL--ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV------LKIIS-GSFPP-----  244 (350)
T ss_dssp             HHH--HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHH-TCCCC-----
T ss_pred             ccc--ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH------HHHHc-CCCCC-----
Confidence            221  23467999999999999999999999999999999999999999765432211      11111 11110     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .....+..+.+|+.+||+.||++|||++|++++
T Consensus       245 ----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          245 ----VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ----CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                112345778999999999999999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.1e-47  Score=402.68  Aligned_cols=251  Identities=24%  Similarity=0.273  Sum_probs=201.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|++.++||+|+||+||+|....++..++.||||+++...  .....++.+|+++|++++|||||++++++.+++..+||
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4788899999999999999876655678899999997532  22344688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+|+.......
T Consensus       105 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             ECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred             EEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence            99999999999999888999999999999999999999964   999999999999999999999999999987544322


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .  ....+||+.|||||++.+..++.++|||||||+||||++|+.||......+..   ..+.    ...        ..
T Consensus       182 ~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~---~~i~----~~~--------~~  244 (304)
T 3ubd_A          182 K--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM---TMIL----KAK--------LG  244 (304)
T ss_dssp             C--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHH----HCC--------CC
T ss_pred             c--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH---HHHH----cCC--------CC
Confidence            2  34567999999999999999999999999999999999999999865432211   1111    111        11


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      .  +...++.+.+|+.+||+.||++|||     ++|++++
T Consensus       245 ~--p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          245 M--PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             C--CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             C--CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            0  1123567889999999999999998     5777753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.5e-47  Score=417.05  Aligned_cols=249  Identities=26%  Similarity=0.351  Sum_probs=209.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |++.++||+|+||.||+|...   .+++.||||++........+.+.+|+.+|++++|||||++++++.+++..+|||||
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~---~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVR---SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeeEeccCcCcEEEEEEEC---CCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            667789999999999999874   46789999999876556667799999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccce
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      |++|+|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+|+.+......  
T Consensus       230 ~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~--  303 (423)
T 4fie_A          230 LEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--  303 (423)
T ss_dssp             CTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC--
T ss_pred             CCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc--
Confidence            999999999864 4689999999999999999999964   9999999999999999999999999999987654322  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....+||+.|||||++.+..++.++|||||||++|||++|+.||......+..   ..+..    ..     .+.+.  .
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~~----~~-----~~~~~--~  369 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRD----NL-----PPRLK--N  369 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHHH----SC-----CCCCS--C
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHHc----CC-----CCCCc--c
Confidence            34578999999999999999999999999999999999999999754432211   11111    10     01111  1


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....+..+.+|+.+||+.||++|||+.|++++
T Consensus       370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11235778999999999999999999999885

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.2e-46  Score=391.73  Aligned_cols=247  Identities=24%  Similarity=0.336  Sum_probs=191.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..|++.++||+|+||+||+|...   .+++.||||+++...   ....+.+.+|++++++++|||||++++++.+++..+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   89 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHT---TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII   89 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECT---TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            35788899999999999999864   467899999996532   223456899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+ +|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+|+.....
T Consensus        90 ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             EEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             EEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999999 689999999888999999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..   ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.......   +...+    .....      
T Consensus       166 ~~---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~---~~~~i----~~~~~------  229 (275)
T 3hyh_A          166 NF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFKNI----SNGVY------  229 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH----HHTCC------
T ss_pred             Cc---cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHHHH----HcCCC------
Confidence            22   345679999999999998876 579999999999999999999997543221   11111    11110      


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ..  +...++.+.+|+.+||+.||++|||++|++++
T Consensus       230 --~~--p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          230 --TL--PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             --CC--CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             --CC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence              00  11234678899999999999999999999975

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.4e-44  Score=383.04  Aligned_cols=260  Identities=22%  Similarity=0.341  Sum_probs=187.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCc-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN-----  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  593 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+.     
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNK---VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEET---TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred             hCEEeeEEecCCCeEEEEEEEC---CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence            4677899999999999999874   4678999999975432 234568999999999999999999999865442     


Q ss_pred             -------eEEEEeecCCCchhhhhhccCC---CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          594 -------RLLVYEFLNNGTLASFLFGNLK---PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       594 -------~~lV~e~~~~gsL~~~l~~~~~---l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                             .++||||+++|+|.+++.....   .++..++.++.||++||+|||+.   +|+||||||+||||+.++.+||
T Consensus        83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred             ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence                   6899999999999999987643   35667889999999999999964   9999999999999999999999


Q ss_pred             eeccCccccccCcccc----------eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh
Q 045343          664 SDFGLAKLLTLNQSKA----------IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA  733 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~  733 (813)
                      +|||+|+.+.......          .....+||+.|||||++.+..++.++|||||||++|||++   ||...... ..
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-~~  235 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-VR  235 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-HH
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-HH
Confidence            9999999876443211          1234579999999999999999999999999999999996   67532111 00


Q ss_pred             hhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCC
Q 045343          734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPN  804 (813)
Q Consensus       734 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~  804 (813)
                      .+     ..........         ........+.+|+.+||+.||.+|||+.|++++= =+.+++.|..
T Consensus       236 ~~-----~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~-~~~~~~~p~~  291 (299)
T 4g31_A          236 TL-----TDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA-VFEDLDFPGK  291 (299)
T ss_dssp             HH-----HHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSG-GGCCC-----
T ss_pred             HH-----HHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCH-hhCCCCCCCc
Confidence            00     0111111110         0112345567899999999999999999998741 1234455543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.4e-43  Score=385.67  Aligned_cols=266  Identities=21%  Similarity=0.317  Sum_probs=201.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec------C
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE------G  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~  591 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++....  ...+.+.+|+++|++++|||||++++++..      .
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~---~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRR---LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CeEEEEEEecccCeEEEEEEEC---CCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            3678899999999999999874   4678999999965322  223568899999999999999999998753      3


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +..+|||||++ |+|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+|+.
T Consensus       132 ~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          132 KSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             CCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             CEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence            57899999995 7899999988899999999999999999999995   4999999999999999999999999999987


Q ss_pred             cccCcc--cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          672 LTLNQS--KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       672 ~~~~~~--~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      +.....  .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.................
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred             cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            653321  1223457899999999998875 5689999999999999999999999865443322111100000000000


Q ss_pred             ccc--------cc---ccccc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDL--------VE---GDMEA---LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~--------~~---~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...        +.   +....   .........+.+|+.+||+.||.+|||+.|++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000        00   00000   0001224678899999999999999999999975

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.9e-42  Score=370.25  Aligned_cols=273  Identities=35%  Similarity=0.624  Sum_probs=232.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +++.+.||+|+||.||+|...    ++..||||++........+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  116 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVLR----DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY  116 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEECT----TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEEC
T ss_pred             cCccceeecCCCeeEEEEEEC----CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEc
Confidence            445678999999999999853    5778999998766555567899999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccC----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          601 LNNGTLASFLFGNL----KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       601 ~~~gsL~~~l~~~~----~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +++|+|.+++....    .+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELD  193 (321)
T ss_dssp             CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred             CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            99999999997543    588999999999999999999964   99999999999999999999999999998755433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .........||+.|+|||++.+..++.++||||||+++|||++|+.||......+......+.........+..++++..
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (321)
T 2qkw_B          194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL  273 (321)
T ss_dssp             CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC
T ss_pred             ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh
Confidence            22223445689999999999988999999999999999999999999986655444444455555555566667777766


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ......+....+.+++.+||+.||++|||+.||+++|+.++++.
T Consensus       274 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            66666788899999999999999999999999999999887654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.7e-42  Score=376.10  Aligned_cols=202  Identities=21%  Similarity=0.324  Sum_probs=170.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|++.++||+|+||+||+|........++.||||++...  ....++.+|+++|.++ +|||||++++++.+.++.++||
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            367788999999999999987644456789999998653  3345688999999988 6999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++.   .+++..+..++.||+.||+|||+.   +|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus       100 E~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A          100 PYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             ECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred             eCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence            9999999999984   588999999999999999999954   99999999999999876 7999999999986543211


Q ss_pred             c--------------------------ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccc
Q 045343          678 K--------------------------AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMG  729 (813)
Q Consensus       678 ~--------------------------~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~  729 (813)
                      .                          ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~  252 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD  252 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence            1                          012345799999999999775 589999999999999999999999965443

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=1.7e-42  Score=360.79  Aligned_cols=235  Identities=20%  Similarity=0.270  Sum_probs=186.7

Q ss_pred             hccCCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCC----c
Q 045343           24 AQNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPR----G   99 (813)
Q Consensus        24 ~~~~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~----~   99 (813)
                      +++.|+|++|++|++++   +|||++|+|+||||+++       ++||   |+  |.+ |||||||+.  |...+    +
T Consensus        11 ~~~~~~l~~g~~l~~~~---~l~S~~g~F~lgf~~~~-------~~~l---y~--~~~-vvW~Anr~~--p~~~~~~~~~   72 (276)
T 3m7h_A           11 GVGTSVLPAYQTLSAGQ---YLLSPNQRFKLLLQGDG-------NLVI---QD--NGA-TVWVANEQQ--PFSSTIPLRN   72 (276)
T ss_dssp             CTTSSEECTTEEBCTTC---EEECTTSSEEEEECTTS-------CEEE---EE--TTE-EEEECSTTS--TTEEEEECCC
T ss_pred             cccCCEecCCCEecCCC---EEEcCCCcEEEEEECCC-------CeEE---EC--CCC-eEEECCCCC--CcCCcccccc
Confidence            35679999999999988   99999999999999432       3677   77  777 999999993  33232    6


Q ss_pred             eEEEEeeCccEEE--eCCCCCEEeeeccCC------CceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCc----
Q 045343          100 SQVKLTADHGLVL--NDPQGKQVWSSEIDI------GTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQT----  167 (813)
Q Consensus       100 ~~l~~~~~g~l~l--~~~~~~~~wst~~~~------~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~----  167 (813)
                      ++|+|+.||+|||  .|++|++||||+++.      .++++|+|+|+|||||++  +.+||||  |||||||||||    
T Consensus        73 ~~l~l~~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~  148 (276)
T 3m7h_A           73 KKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLL  148 (276)
T ss_dssp             TTCCSEEEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEE
T ss_pred             eEEEEeCCCcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccc
Confidence            7899999999999  788899999999875      345789999999999998  7899999  99999999999    


Q ss_pred             cccccceeecCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccCCCCCCCCceEEEeccCccEEEEecCC
Q 045343          168 METKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNG  247 (813)
Q Consensus       168 l~~~~~L~S~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (813)
                      |..+++|   ++.+||++|.|++.++++|+++++. ..     ...||+++++...    . ..+.++.++.+.+++.++
T Consensus       149 l~~g~~L---~S~~dps~G~fsl~l~~dGnlvLy~-~~-----~~~yW~Sgt~~~~----~-~~l~l~~dGnLvl~d~~~  214 (276)
T 3m7h_A          149 LAPGSEL---VQGVVYGAGASKLVFQGDGNLVAYG-PN-----GAATWNAGTQGKG----A-VRAVFQGDGNLVVYGAGN  214 (276)
T ss_dssp             ECSSEEE---CTTCEEEETTEEEEECTTSCEEEEC-TT-----SSEEEECCCTTTT----C-CEEEECTTSCEEEECTTS
T ss_pred             cccCccc---ccCCCCCCceEEEeecCCceEEEEe-CC-----CeEEEECCCCCCc----c-EEEEEcCCCeEEEEeCCC
Confidence            6667778   5689999999999999999876642 11     2689999998641    2 567788888888887666


Q ss_pred             ceeEeecccccCCcceEEEEEEeeCceeEEEeecCCCCCCeEEEEccccc-ccccc
Q 045343          248 GRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPEN-ICVNI  302 (813)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~~~~~~~~~W~~~~~~p~d-~Cd~y  302 (813)
                      ..+..+....    ...+|++|+.||+|++|.|    ...|..+|.+|+. .+.++
T Consensus       215 ~~vWsS~t~~----~~~~rl~Ld~dGnLvly~~----~~~Wqsf~~~P~~~~~~~~  262 (276)
T 3m7h_A          215 AVLWHSHTGG----HASAVLRLQANGSIAILDE----KPVWARFGFQPTYRHIRKI  262 (276)
T ss_dssp             CEEEECSCTT----CTTCEEEECTTSCEEEEEE----EEEEESSSCCTTSCEEEEE
T ss_pred             cEEEEecCCC----CCCEEEEEcCCccEEEEcC----CCeEEccCccCCcccccee
Confidence            5555444321    1247999999999999988    2458888877764 44443

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.2e-41  Score=369.04  Aligned_cols=285  Identities=43%  Similarity=0.741  Sum_probs=237.8

Q ss_pred             CCCCCCHHHHHHHHhhc--ccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcce
Q 045343          507 NLPCFSYKELEEATDNF--KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVR  583 (813)
Q Consensus       507 ~~~~~~~~el~~~~~~~--~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~  583 (813)
                      ....+++.++.....+|  .+.||+|+||.||+|...    ++..||||++..... .....+.+|+.++++++|+||++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   91 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA----DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR   91 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS----SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec----CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence            35668888888877665  578999999999999743    577899999875432 23447899999999999999999


Q ss_pred             EEeEeecCCceEEEEeecCCCchhhhhhccC----CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC
Q 045343          584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNL----KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY  659 (813)
Q Consensus       584 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~  659 (813)
                      +++++.+....++||||+++|+|.+++....    .+++..+..++.|++.||.|||+.+..+|+||||||+|||++.++
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A           92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred             eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence            9999999999999999999999999997643    489999999999999999999976555999999999999999999


Q ss_pred             CEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCccc--chhhhhhHH
Q 045343          660 NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEM--GEEYAILTD  737 (813)
Q Consensus       660 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~--~~~~~~l~~  737 (813)
                      .+||+|||+++......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....  ......+..
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCE-ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             CEEeccCccccccCcccccc-cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            99999999998775443322 344569999999999988889999999999999999999999996322  122233445


Q ss_pred             HHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      +.........+..+.+.........+..+.+.+++.+||+.||.+|||+.||+++|++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            55566666677777777776667778899999999999999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.6e-41  Score=393.31  Aligned_cols=251  Identities=24%  Similarity=0.333  Sum_probs=208.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|++.++||+|+||+||+|...   .+++.||||++........+.+.+|+.+|++++|||||++++++.+....+||||
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~---~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTER---ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccEEEEEEeeccCeEEEEEEEC---CCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            4778899999999999999874   4678999999976555556678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC--CCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY--YNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~--~~~kl~DfGla~~~~~~~  676 (813)
                      ||++|+|.++|.. ...+++..+..++.||+.||.|||+.   +|+||||||+|||++.+  +.+||+|||+|+.+....
T Consensus       235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            9999999999865 46789999999999999999999964   99999999999999854  899999999999876543


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   ....+||+.|+|||++.+..++.++|||||||+||||++|+.||......+...   .+    .....      ..
T Consensus       312 ~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~---~i----~~~~~------~~  375 (573)
T 3uto_A          312 S---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR---NV----KSCDW------NM  375 (573)
T ss_dssp             E---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HH----HTTCC------CC
T ss_pred             c---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH---HH----HhCCC------CC
Confidence            2   345679999999999999999999999999999999999999998654332111   11    00000      00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........++.+.+|+.+||+.||.+|||+.|++++
T Consensus       376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000111235678899999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.9e-41  Score=388.12  Aligned_cols=248  Identities=24%  Similarity=0.272  Sum_probs=200.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhh---eeeeeeccccCCcceEEeEeecCCce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKN---EVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      +++.+.||+|+||+||+|...   .+++.||||++++..   ......+.+   ++.+++.++|||||++++++.+.+..
T Consensus       191 f~i~k~LG~G~fG~V~la~~~---~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          191 FSVHRIIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             eEEEEEEecccCeEEEEEEEC---CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            677899999999999999874   467899999996532   122222333   46677788999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|||||++||+|.++|.....+++..+..++.||+.||.|||+   .+|+||||||+||||+.++++||+|||+|+.+..
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            9999999999999999988899999999999999999999994   5999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..    ....+||+.|||||++.. ..++.++|+|||||+||||++|+.||..........+.....    ..       
T Consensus       345 ~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~----~~-------  409 (689)
T 3v5w_A          345 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----TM-------  409 (689)
T ss_dssp             CC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH----HC-------
T ss_pred             CC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc----CC-------
Confidence            33    344689999999999964 579999999999999999999999997644322211111111    00       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                       ...  .....+..+.+|+.+||+.||.+|++     ++||+++
T Consensus       410 -~~~--~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          410 -AVE--LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             -CCC--CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             -CCC--CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence             011  01123567889999999999999998     6888764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.9e-40  Score=356.83  Aligned_cols=263  Identities=27%  Similarity=0.433  Sum_probs=200.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+++.++||+|+||+||+|..     .+..||||++.....  ...+++.+|++++++++|+||+++++++.+....++
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEW-----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             hHceeeeEeecCCCeEEEEEEE-----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            3566788999999999999976     567899999865432  223568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccC---CCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          597 VYEFLNNGTLASFLFGNL---KPSWNLRTNIAFQIARGLLYLHEDCSAQ--IIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gl~yLH~~~~~~--ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ||||+++|+|.+++....   .+++..++.++.||++||+|||+.   +  |+||||||+|||++.++.+||+|||+++.
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            999999999999998754   389999999999999999999954   7  99999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .......  .....||+.|+|||++.+..++.++||||||+++|||++|+.||...........   ...   .....  
T Consensus       189 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~---~~~---~~~~~--  258 (309)
T 3p86_A          189 KASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA---VGF---KCKRL--  258 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH---HHH---SCCCC--
T ss_pred             ccccccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHh---cCCCC--
Confidence            5433211  2345689999999999999999999999999999999999999975543221110   000   00000  


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCCCC
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPY  806 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~p~  806 (813)
                             .........+.+++.+||+.||.+|||+.||++.|+.+++-..||.++
T Consensus       259 -------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~~  306 (309)
T 3p86_A          259 -------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR  306 (309)
T ss_dssp             -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--------
T ss_pred             -------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCCc
Confidence                   011233567889999999999999999999999999988776665443

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.9e-40  Score=359.55  Aligned_cols=267  Identities=23%  Similarity=0.412  Sum_probs=214.8

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      +....+.+.+.||+|+||.||+|....+...+..||||+++... ....+++.+|+.++++++|+||+++++++.+++..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            33455777899999999999999987666667789999997542 23345789999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ++||||+++++|.+++... ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            9999999999999999654 5789999999999999999999964   99999999999999999999999999998775


Q ss_pred             cCcccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ...... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||.........   .    .....     
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~---~----~~~~~-----  270 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI---S----SVEEG-----  270 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---H----HHHTT-----
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH---H----HHHcC-----
Confidence            443221 1223446788999999998899999999999999999999 99999754432211   1    11110     


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                          .........+..+.+++.+||+.||.+|||+.||++.|+.+++.+.
T Consensus       271 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          271 ----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             ----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence                0111122345788999999999999999999999999999876543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.8e-40  Score=359.28  Aligned_cols=269  Identities=28%  Similarity=0.362  Sum_probs=206.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCc----eE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN----RL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----~~  595 (813)
                      .+++.++||+|+||+||+|..     .++.||||+++... .....+..|+.++++++||||+++++++.+...    .+
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQL-----LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEE-----TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             hchhhheecccCceEEEEEEE-----CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            466788999999999999986     46889999996532 233456679999999999999999999977543    69


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-------CCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-------SAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-------~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      +||||+++|+|.+++... .+++..++.++.||++||+|||+.+       +.+|+||||||+|||++.++.+||+|||+
T Consensus        99 lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             EEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence            999999999999999664 4899999999999999999999421       12999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCC-----CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHH-----
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-----TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW-----  738 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~-----  738 (813)
                      ++...............||+.|+|||++.+.     .++.++||||||+++|||++|+.||..............     
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  257 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP  257 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence            9877654433323446799999999999863     456688999999999999999999976443221111100     


Q ss_pred             ----HHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          739 ----AFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       739 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                          ................   ........+.+.+++.+||+.||++|||+.||++.|+++.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          258 SLEDMQEVVVHKKKRPVLRD---YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CHHHHHHHHTTSCCCCCCCG---GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhcccCCCCccc---cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                0011111111111111   11123456789999999999999999999999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.4e-40  Score=355.12  Aligned_cols=261  Identities=26%  Similarity=0.434  Sum_probs=210.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.++||+|+||+||+|...   .++..||+|++........+.+.+|++++++++||||+++++++.+++..++||
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~---~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHR---ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEEC---CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence            34667789999999999999874   357889999987655556678999999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|.+++.. ...+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             ECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             EecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            99999999999986 56789999999999999999999964   999999999999999999999999999987654322


Q ss_pred             cc------------eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          678 KA------------IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       678 ~~------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ..            ......||+.|+|||++.+..++.++||||||+++|||++|..|+..........           
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----------  232 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-----------  232 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-----------
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-----------
Confidence            11            0114569999999999999999999999999999999999999986433211100           


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                         ................+..+.+++.+||+.||++|||+.|+++.|+.+..-
T Consensus       233 ---~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          233 ---GLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             ---SBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---hhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence               000000000001123345688999999999999999999999999887543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=7e-40  Score=361.48  Aligned_cols=262  Identities=26%  Similarity=0.401  Sum_probs=211.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEec----cCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT----TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~----~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ..+.+.+.||+|+||.||+|....    ....+..||||+++... ....+++.+|+.+++++ +||||+++++++.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            456778899999999999998753    12356789999997542 22345789999999999 8999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      ..++||||+++|+|.+++....                .+++..++.++.||++||.|||+.   +|+||||||+|||++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence            9999999999999999997542                478999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAIL  735 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l  735 (813)
                      .++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+..  
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~--  315 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--  315 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH--
Confidence            999999999999987654433222334557889999999999999999999999999999999 99999754332211  


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                       .    .......         ......+...+.+++.+||+.||.+||++.|+++.|+.++.+
T Consensus       316 -~----~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          316 -K----LLKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             -H----HHHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -H----HHhcCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence             1    1111110         111223457889999999999999999999999999987643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=5.9e-39  Score=344.75  Aligned_cols=279  Identities=39%  Similarity=0.648  Sum_probs=223.3

Q ss_pred             CCCCCCHHHHHHHHhhccc--------ccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeee
Q 045343          507 NLPCFSYKELEEATDNFKE--------EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIG  574 (813)
Q Consensus       507 ~~~~~~~~el~~~~~~~~~--------~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~  574 (813)
                      ....|++.++..++.+|.+        .||+|+||.||+|..     .+..||||++....    ....+.+.+|+.+++
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~   85 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMA   85 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-----CCceEEEEEEecccCcchHHHHHHHHHHHHHHH
Confidence            4567999999999998864        599999999999975     46789999986532    223456889999999


Q ss_pred             ccccCCcceEEeEeecCCceEEEEeecCCCchhhhhhc---cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCC
Q 045343          575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFG---NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ  651 (813)
Q Consensus       575 ~l~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~  651 (813)
                      +++||||+++++++.+.+..++||||+++++|.+++..   ...+++..++.++.||++||.|||+.   +|+||||||+
T Consensus        86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~  162 (307)
T 2nru_A           86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSA  162 (307)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred             hcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHH
Confidence            99999999999999999999999999999999999864   34689999999999999999999964   9999999999


Q ss_pred             cEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       652 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      ||+++.++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||.......
T Consensus       163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  241 (307)
T 2nru_A          163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ  241 (307)
T ss_dssp             GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS
T ss_pred             HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH
Confidence            99999999999999999987654433322344579999999998875 47889999999999999999999997544322


Q ss_pred             hhhhHHHHHHhh-ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          732 YAILTDWAFDCY-RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       732 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ..  ..+..... ....+...++..+. .......+.+.+++.+||+.||.+|||+.+|+++|+++.
T Consensus       242 ~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          242 LL--LDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             BT--THHHHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HH--HHHHHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            11  11111111 11122223333222 234467888999999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.8e-39  Score=347.27  Aligned_cols=250  Identities=26%  Similarity=0.368  Sum_probs=206.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|.+.++||+|+||+||+|...   .+++.||||++........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBT---TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceeeeeeeccCCCeEEEEEEEC---CCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            4567789999999999999763   4678999999976655556678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++|+|.+++... .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++......... 
T Consensus        98 ~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  172 (297)
T 3fxz_A           98 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-  172 (297)
T ss_dssp             CCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred             CCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence            99999999998764 588999999999999999999964   9999999999999999999999999999876644332 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....||+.|+|||++.+..++.++||||||+++|||++|+.||...........      ..... ....       .
T Consensus       173 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------~~~~~-~~~~-------~  237 (297)
T 3fxz_A          173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL------IATNG-TPEL-------Q  237 (297)
T ss_dssp             -BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH------HHHHC-SCCC-------S
T ss_pred             -cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhCC-CCCC-------C
Confidence             3446799999999999999999999999999999999999999975543221110      00000 0000       0


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            112345678899999999999999999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.3e-40  Score=355.62  Aligned_cols=280  Identities=24%  Similarity=0.381  Sum_probs=208.7

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec--CC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~  592 (813)
                      +....+++.++||+|+||+||+|.... ....+..||||++........+++.+|+.++++++||||+++++++..  ..
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            334567788999999999999998532 234678999999986555556779999999999999999999999854  45


Q ss_pred             ceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ..++||||+++++|.+++... ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            689999999999999999765 4589999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          672 LTLNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       672 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+.....+.................+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            7543321 112334577889999999999999999999999999999999998864322110000000000000000000


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+...........+++.+.+++.+||+.||.+|||+.||++.|+.+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            111111111223456789999999999999999999999999988754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=8.3e-39  Score=346.01  Aligned_cols=262  Identities=24%  Similarity=0.331  Sum_probs=213.8

Q ss_pred             CCCCHHHHHHHHhh------------cccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc
Q 045343          509 PCFSYKELEEATDN------------FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT  576 (813)
Q Consensus       509 ~~~~~~el~~~~~~------------~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l  576 (813)
                      +.++++++..++..            +.++||+|+||.||+|...   .+++.||||++........+.+.+|+.+++++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~---~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l   99 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREK---HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY   99 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEEC---CCCcEEEEEEEeccchhHHHHHHHHHHHHHhC
Confidence            56888998888754            3457999999999999874   36789999999766555567789999999999


Q ss_pred             ccCCcceEEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       577 ~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      +|+||+++++++...+..++||||+++++|.+++.. ..+++..+..++.||++||.|||+.   +|+||||||+|||++
T Consensus       100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~  175 (321)
T 2c30_A          100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT  175 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            999999999999999999999999999999998865 4689999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhH
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT  736 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~  736 (813)
                      .++.+||+|||++.........  .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........   
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~---  250 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM---  250 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---
T ss_pred             CCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence            9999999999999876543222  23457999999999999989999999999999999999999999754332111   


Q ss_pred             HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ....    ...     .+...  ........+.+++.+||+.||.+|||+.|++++-
T Consensus       251 ~~~~----~~~-----~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp  296 (321)
T 2c30_A          251 KRLR----DSP-----PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP  296 (321)
T ss_dssp             HHHH----HSS-----CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             HHHh----cCC-----CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            1111    110     00010  1112356788999999999999999999999863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.5e-40  Score=364.17  Aligned_cols=264  Identities=24%  Similarity=0.423  Sum_probs=201.1

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ....+.+.+.||+|+||.||+|........+..||||+++... ....+++.+|+.++++++||||+++++++.+....+
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence            3345667789999999999999876444567889999997542 233457899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+++|+|.+++... ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999999999999999765 4689999999999999999999964   999999999999999999999999999987754


Q ss_pred             Ccccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          675 NQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       675 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+..   ..    ...       
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~---~~----i~~-------  265 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI---KA----VDE-------  265 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH---HH----HHT-------
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HH----HHc-------
Confidence            33211 1122345778999999999999999999999999999998 99999754332211   11    111       


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                        .........++..+.+++.+||+.||.+||++.+|+++|+.++..
T Consensus       266 --~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          266 --GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             --TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence              111111223467889999999999999999999999999887543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.3e-40  Score=360.54  Aligned_cols=264  Identities=25%  Similarity=0.383  Sum_probs=210.8

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ....+.+.++||+|+||.||+|....  ...+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.+.+
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            34556778899999999999998754  345678999999975422 2345689999999999 7999999999998765


Q ss_pred             c-eEEEEeecCCCchhhhhhccCC--------------------------------------------------------
Q 045343          593 N-RLLVYEFLNNGTLASFLFGNLK--------------------------------------------------------  615 (813)
Q Consensus       593 ~-~~lV~e~~~~gsL~~~l~~~~~--------------------------------------------------------  615 (813)
                      . .++||||+++|+|.+++.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence            4 8999999999999999976432                                                        


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeeccc
Q 045343          616 ----------PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR  685 (813)
Q Consensus       616 ----------l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~  685 (813)
                                +++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++...............
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  256 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR  256 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence                      88999999999999999999964   99999999999999999999999999998765444333344566


Q ss_pred             ccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHH
Q 045343          686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKC  764 (813)
Q Consensus       686 gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  764 (813)
                      ||+.|+|||++.+..++.++||||||+++|||++ |+.||.........  .    ..........         .....
T Consensus       257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~----~~~~~~~~~~---------~~~~~  321 (359)
T 3vhe_A          257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--C----RRLKEGTRMR---------APDYT  321 (359)
T ss_dssp             ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH--H----HHHHHTCCCC---------CCTTC
T ss_pred             CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH--H----HHHHcCCCCC---------CCCCC
Confidence            8999999999999999999999999999999998 99999754432211  0    1111110000         11123


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          765 VEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       765 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ...+.+++..||+.||.+|||+.||+++|+.+++
T Consensus       322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            4678899999999999999999999999998764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=8.5e-39  Score=341.52  Aligned_cols=267  Identities=25%  Similarity=0.341  Sum_probs=210.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..|.+.+.||+|+||.||++...   ..+..||||++.....   ...+.+.+|+.++++++||||+++++++.+++..+
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDT---ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET---TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEEC---CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence            34677899999999999999864   3577899999854322   22356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++++|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            9999999999999998888899999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........      ...... ....     
T Consensus       165 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~~~-~~~~-----  231 (294)
T 4eqm_A          165 SLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA------IKHIQD-SVPN-----  231 (294)
T ss_dssp             -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH------HHHHSS-CCCC-----
T ss_pred             cccc-cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhhc-cCCC-----
Confidence            2221 23456999999999999999999999999999999999999999765432211      111111 1110     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcCcCCCCCCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGVVEVSLPPN  804 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~~~~p~~  804 (813)
                      .........++.+.+++.+||+.||.+|| +++++.+.|+.+..-.....
T Consensus       232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~  281 (294)
T 4eqm_A          232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE  281 (294)
T ss_dssp             HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred             cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence            00111123457889999999999999998 99999999998876544433

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=5.4e-39  Score=348.13  Aligned_cols=247  Identities=23%  Similarity=0.370  Sum_probs=205.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++....  ....+.+.+|++++++++||||+++++++...+..++|
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHI---LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            4677899999999999999874   367889999997542  22345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|.+++.....+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred             EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence            99999999999998888899999999999999999999964   999999999999999999999999999987654322


Q ss_pred             cceeecccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTIT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                         .....||+.|+|||++.+..+. .++|||||||++|||++|+.||......+..   ..+    ..+.        .
T Consensus       170 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i----~~~~--------~  231 (328)
T 3fe3_A          170 ---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR---ERV----LRGK--------Y  231 (328)
T ss_dssp             ---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH----HHCC--------C
T ss_pred             ---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH---HHH----HhCC--------C
Confidence               3456799999999999888765 7899999999999999999999765432211   111    1110        0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  +...+..+.+++.+||+.||.+|||++|++++
T Consensus       232 ~~--p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          232 RI--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CC--CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CC--CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            00  11234678899999999999999999999976

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.3e-39  Score=339.63  Aligned_cols=258  Identities=25%  Similarity=0.419  Sum_probs=210.2

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ....+.+.+.||+|+||.||+|...    ++..||||+++... ...+++.+|+.++.+++||||+++++++.+....++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK----GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec----CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEE
Confidence            3445678899999999999999764    45679999997543 345678999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++++|.+++... ..+++..++.++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             EEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            99999999999999765 4589999999999999999999964   9999999999999999999999999999876544


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||..........      .. ....  .... 
T Consensus       158 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~~-~~~~--~~~~-  226 (268)
T 3sxs_A          158 QYVS-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------KV-SQGH--RLYR-  226 (268)
T ss_dssp             CEEE-CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH------HH-HTTC--CCCC-
T ss_pred             hhhc-ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH------HH-HcCC--CCCC-
Confidence            3221 233456778999999998889999999999999999999 999997554322111      00 0000  0000 


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                            ....++.+.+++.+||+.||.+|||+.|++++|+.+.+.
T Consensus       227 ------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          227 ------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             ------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence                  112246788999999999999999999999999998754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.3e-39  Score=360.36  Aligned_cols=258  Identities=25%  Similarity=0.380  Sum_probs=208.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...+.+.++||+|+||.||+|...   .++..||||.++.... ...+++.+|++++++++||||+++++++.+.+..++
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLR---ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET---TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEe---cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            345677899999999999999884   3567899999875322 234578999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++|+|.+++... ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            99999999999999765 4689999999999999999999964   9999999999999999999999999999865433


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   .    ....+.       
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~---~----~~~~~~-------  332 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR---E----FVEKGG-------  332 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH---H----HHHTTC-------
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHHcCC-------
Confidence            21111112235778999999998889999999999999999998 99999754432211   1    111110       


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                        .......+++.+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus       333 --~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          333 --RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence              01111234567889999999999999999999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=3e-39  Score=358.29  Aligned_cols=268  Identities=28%  Similarity=0.389  Sum_probs=216.4

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccC----CcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      ++....+.+.++||+|+||.||+|......    ..+..||||+++.... ...+++.+|+++++++ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            444567788899999999999999875322    3456899999975422 2346788999999999 899999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      .+++..++||||+++|+|.+++....                .+++..++.++.||++||.|||+.   +|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence            99999999999999999999997543                489999999999999999999964   99999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ||++.++.+||+|||+++...............+|..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~  301 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  301 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999987754433222344567889999999999999999999999999999999 999997543322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                      ..       .........         .........+.+++.+||+.||.+|||+.||+++|++++....
T Consensus       302 ~~-------~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          302 LF-------KLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             HH-------HHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HH-------HHHHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            11       111111100         0112345678999999999999999999999999999876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.4e-40  Score=360.55  Aligned_cols=264  Identities=28%  Similarity=0.392  Sum_probs=209.6

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +....+.+.++||+|+||.||+|....  ....+..||||+++.. ......++.+|+.++++++|+||+++++++.+..
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            334567788999999999999998653  2345678999998643 2334456889999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC---CEE
Q 045343          593 NRLLVYEFLNNGTLASFLFGN-------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY---NAR  662 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~---~~k  662 (813)
                      ..++||||+++|+|.+++...       ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++   .+|
T Consensus       148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence            999999999999999999754       3578999999999999999999964   999999999999999554   599


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||......+..   ..   
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~---~~---  298 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---EF---  298 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HH---
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HH---
Confidence            999999986644332222344568999999999999999999999999999999998 99999755432211   11   


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                       ......         .......+..+.+++.+||+.||.+|||+.||+++|+.+.+
T Consensus       299 -i~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          299 -VTSGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             -HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHcCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence             111110         01112335678899999999999999999999999987654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=3.2e-39  Score=350.25  Aligned_cols=261  Identities=24%  Similarity=0.393  Sum_probs=203.3

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCC-cceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRT-STTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...+.+.+.||+|+||+||+|....+.. -...||+|.++... ....+++.+|+.++++++||||+++++++.+. ..+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence            3456778899999999999998753321 22347888885432 33456799999999999999999999999875 478


Q ss_pred             EEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+++|+|.+++.. ...+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence            99999999999999976 46789999999999999999999965   999999999999999999999999999988765


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...........+|..|+|||++.+..++.++||||||+++|||++ |+.||...........       ....       
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-------~~~~-------  235 (327)
T 3poz_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-------LEKG-------  235 (327)
T ss_dssp             TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-------HHTT-------
T ss_pred             CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH-------HHcC-------
Confidence            544333344567889999999999999999999999999999999 9999976543321111       1110       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        ........+...+.+++.+||+.||.+||++.||+++|+.+..
T Consensus       236 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          236 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             --CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             --CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence              0111122345678899999999999999999999999987653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.8e-38  Score=348.24  Aligned_cols=251  Identities=25%  Similarity=0.322  Sum_probs=205.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      .|.+.+.||+|+||.||++...   .++..||||.++.....      ..+++.+|+.++++++||||+++++++.+...
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREK---STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             ceEEeeEEeeCcCEEEEEEEEC---CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            4678899999999999999874   46789999999754322      23568899999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----CEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----NARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----~~kl~DfGla  669 (813)
                      .++||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++    .+||+|||++
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            999999999999999998888899999999999999999999964   999999999999998776    7999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +.......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||......+...       ........
T Consensus       167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~-------~i~~~~~~  236 (361)
T 2yab_A          167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA-------NITAVSYD  236 (361)
T ss_dssp             EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH-------HHHTTCCC
T ss_pred             eEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHhcCCC
Confidence            87654322   234579999999999999899999999999999999999999997654322110       00000000


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        .++.    ......+.+.+++.+||+.||.+|||+.|++++
T Consensus       237 --~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          237 --FDEE----FFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             --CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             --CCch----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              0000    001234678899999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.6e-39  Score=338.17  Aligned_cols=255  Identities=27%  Similarity=0.446  Sum_probs=208.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.++||+|+||.||+|...    ++..||||++.... ...+++.+|++++++++||||+++++++.+....++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhceeeheecCCCccEEEEEEec----CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            34677889999999999999874    45679999997542 34567999999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|.+++... ..+++..++.++.|+++||+|||+.   +|+||||||+||+++.++.+||+|||+++.......
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  161 (269)
T 4hcu_A           85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  161 (269)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence            999999999999654 5689999999999999999999964   999999999999999999999999999987654322


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   .    .....  ...     
T Consensus       162 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~---~----~~~~~--~~~-----  226 (269)
T 4hcu_A          162 TS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---E----DISTG--FRL-----  226 (269)
T ss_dssp             HS-TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---H----HHHTT--CCC-----
T ss_pred             cc-ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH---H----HHhcC--ccC-----
Confidence            11 233456788999999998899999999999999999999 99999754432211   1    01110  000     


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        .........+.+++.+||+.||.+||++.|++++|+++.+
T Consensus       227 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          227 --YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence              0111235678899999999999999999999999998764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.4e-38  Score=344.12  Aligned_cols=248  Identities=23%  Similarity=0.264  Sum_probs=205.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+||.||++...   .+++.||||+++..   .......+.+|+.++++++||||+++++++.+.+..++
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            4667789999999999999874   46789999999753   22334568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        83 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  159 (337)
T 1o6l_A           83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence            999999999999998888899999999999999999999964   99999999999999999999999999998644322


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........   .    .......        
T Consensus       160 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~----~i~~~~~--------  222 (337)
T 1o6l_A          160 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF---E----LILMEEI--------  222 (337)
T ss_dssp             CC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H----HHHHCCC--------
T ss_pred             Cc--ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH---H----HHHcCCC--------
Confidence            21  34567999999999999999999999999999999999999999754332111   1    1001110        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .  ........+.+++.+||+.||.+||     +++||+++
T Consensus       223 ~--~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          223 R--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             C--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C--CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            0  0112356788999999999999999     89999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=6.8e-39  Score=346.98  Aligned_cols=254  Identities=28%  Similarity=0.404  Sum_probs=204.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||++..... ...+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hceeeeEEecCCCEEEEEEEEC---CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            3667889999999999999874   3677899999864322 23467889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+++++|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+......
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            9999999999999888899999999999999999999964   9999999999999999999999999999876544333


Q ss_pred             ceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......... ...+.    ...   ....    
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~----~~~---~~~~----  229 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWK----EKK---TYLN----  229 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-HHHHH----TTC---TTST----
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHHh----ccc---ccCC----
Confidence            32345679999999999987765 77899999999999999999999755432211 11110    000   0000    


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        ........+.+++.+||+.||.+|||+.|++++-
T Consensus       230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~  263 (323)
T 3tki_A          230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKDR  263 (323)
T ss_dssp             --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred             --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence              0112356778999999999999999999998763

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=6e-39  Score=345.67  Aligned_cols=262  Identities=27%  Similarity=0.398  Sum_probs=212.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+.+.+.||+|+||.||+|.....  +..+..||||+++... ....+++.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            34567789999999999999987432  2456889999997532 23346788999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccC------------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCC
Q 045343          595 LLVYEFLNNGTLASFLFGNL------------------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKP  650 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~------------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~  650 (813)
                      ++||||+++++|.+++....                        .+++..++.++.||++||.|||+.   +|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence            99999999999999997543                        378999999999999999999964   999999999


Q ss_pred             CcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccc
Q 045343          651 QNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMG  729 (813)
Q Consensus       651 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~  729 (813)
                      +|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987755433322334557889999999998889999999999999999999 9999975543


Q ss_pred             hhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       730 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      +....       ........         ......++.+.+++.+||+.||.+||++.||+++|++++.
T Consensus       259 ~~~~~-------~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          259 ERLFN-------LLKTGHRM---------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             GGHHH-------HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHH-------HhhcCCcC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            22111       11111100         1112345778999999999999999999999999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=9.2e-39  Score=348.86  Aligned_cols=262  Identities=26%  Similarity=0.388  Sum_probs=210.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+.+.+.||+|+||.||+|......  ..+..||||+++.... ...+++.+|+.++++++||||+++++++.+++..+
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  126 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC  126 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence            34567789999999999999886322  3558899999975422 23457899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCC
Q 045343          596 LVYEFLNNGTLASFLFGN------------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ  651 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~  651 (813)
                      +||||+++|+|.+++...                        ..+++..++.++.||++||.|||+.   +|+||||||+
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~  203 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATR  203 (343)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcc
Confidence            999999999999999753                        4688999999999999999999964   9999999999


Q ss_pred             cEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccch
Q 045343          652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGE  730 (813)
Q Consensus       652 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~  730 (813)
                      |||++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus       204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  283 (343)
T 1luf_A          204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE  283 (343)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH
Confidence            99999999999999999987654433222344568899999999998899999999999999999999 99999754332


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      +..       .....+....         .....+..+.+++.+||+.||.+||++.+|+++|+++.+-
T Consensus       284 ~~~-------~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          284 EVI-------YYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHH-------HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHH-------HHHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            211       1111111111         1113456789999999999999999999999999987653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.4e-39  Score=343.38  Aligned_cols=260  Identities=23%  Similarity=0.353  Sum_probs=198.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...+++.+.||+|+||.||+|....+...+..||||+++.... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            4567788999999999999999876555677899999865322 23456889999999999999999999984 567899


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++++|.+++... ..+++..++.++.|+++||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence            99999999999999765 4689999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+..   ...    ......     
T Consensus       170 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~---~~i----~~~~~~-----  236 (281)
T 1mp8_A          170 TYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---GRI----ENGERL-----  236 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH---HHH----HTTCCC-----
T ss_pred             cccc-cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH---HHH----HcCCCC-----
Confidence            2221 233456789999999998899999999999999999997 99999755432211   111    111000     


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                          ......+..+.+++.+||+.||.+|||+.|++++|+.+.+
T Consensus       237 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          237 ----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                0112345778899999999999999999999999987653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=5.5e-39  Score=345.83  Aligned_cols=264  Identities=25%  Similarity=0.390  Sum_probs=213.7

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ....+.+.+.||+|+||.||+|....  ....+..||||+++.... ...+.+.+|+.+++++ +||||+++++++.+++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            34457788999999999999998643  334678999999975432 2346789999999999 9999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccC------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEE
Q 045343          593 NRLLVYEFLNNGTLASFLFGNL------------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNIL  654 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIl  654 (813)
                      ..++||||+++|+|.+++....                  .+++..++.++.||++||.|||+.   +|+||||||+||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence            9999999999999999997543                  488999999999999999999964   9999999999999


Q ss_pred             EcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhh
Q 045343          655 LDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYA  733 (813)
Q Consensus       655 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~  733 (813)
                      ++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            99999999999999988765544333344567889999999998899999999999999999999 99999754432211


Q ss_pred             hhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       734 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        .......     ..        .......+..+.+++.+||+.||.+|||+.|++++|+++++
T Consensus       258 --~~~~~~~-----~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          258 --YKMIKEG-----FR--------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             --HHHHHHT-----CC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHhccC-----CC--------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence              1111110     00        01112335778999999999999999999999999988654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=4.8e-39  Score=364.72  Aligned_cols=258  Identities=26%  Similarity=0.414  Sum_probs=209.8

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +....+.+.++||+|+||.||+|...    .+..||||+++... ...++|.+|+.+|++++||||+++++++. .+..+
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC----CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence            33445677899999999999999874    45789999997542 34678999999999999999999999986 56789


Q ss_pred             EEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      +||||+++|+|.+++...  ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            999999999999999764  3688999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... .....++..|+|||++....++.++||||||++||||++ |+.||......+..   ..+..    +      
T Consensus       336 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~---~~i~~----~------  401 (454)
T 1qcf_A          336 DNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---RALER----G------  401 (454)
T ss_dssp             CHHHHT-TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHHH----T------
T ss_pred             CCceec-cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH---HHHHc----C------
Confidence            332111 223446788999999998899999999999999999999 99999754332211   11111    0      


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                         ........+++.+.+++.+||+.||.+|||+.+|++.|+.+...
T Consensus       402 ---~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          402 ---YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence               00111223467889999999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.1e-38  Score=338.38  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=206.6

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.+.++||+|+||.||++...    .+..||||+++... ...+++.+|++++.+++|+||+++++++.+.+..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET----TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc----CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            345677899999999999999774    56679999997542 3356789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++++|.+++.. ...+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++......
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            999999999999977 56789999999999999999999964   99999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..........       ..... .       
T Consensus       175 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-------~~~~~-~-------  238 (283)
T 3gen_A          175 YTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-------HIAQG-L-------  238 (283)
T ss_dssp             HHS-TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-------HHHTT-C-------
T ss_pred             ccc-ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-------HHhcc-c-------
Confidence            211 223456788999999998899999999999999999998 999997554322111       00110 0       


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                       .........+.+.+++.+||+.||.+|||+.|++++|+++.+
T Consensus       239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence             000111224678899999999999999999999999988754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.3e-39  Score=368.72  Aligned_cols=259  Identities=28%  Similarity=0.413  Sum_probs=212.1

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ....+.+.++||+|+||.||+|...   ..+..||||.++... ...++|.+|+.+|++++||||++++++|.+....++
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEG---GGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEc---CCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            3445677899999999999999885   346789999997542 345679999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||||+++|+|.+++...  ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            99999999999999753  4688999999999999999999964   999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... .....++..|+|||++....++.++||||||++||||++ |+.||......+..   ..    +..        
T Consensus       371 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~---~~----~~~--------  434 (495)
T 1opk_A          371 DTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---EL----LEK--------  434 (495)
T ss_dssp             CCEEC-CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HH----HHT--------
T ss_pred             Cceee-cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH---HH----HHc--------
Confidence            32211 223456789999999998899999999999999999999 99998754332211   11    111        


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                       .........+++.+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus       435 -~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          435 -DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence             111111223467889999999999999999999999999987643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-38  Score=348.72  Aligned_cols=266  Identities=24%  Similarity=0.356  Sum_probs=211.5

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      +....+.+.+.||+|+||.||+|.....  ...+..||||.++... ....+.+.+|+.++.++ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            3345667789999999999999987432  2356789999997532 23456789999999999 899999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccC-----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCC
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNL-----------------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDI  648 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dl  648 (813)
                      +..++||||+++|+|.+++....                       .+++..++.++.||++||.|||+.   +|+||||
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di  198 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL  198 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            99999999999999999997643                       378999999999999999999964   9999999


Q ss_pred             CCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcc
Q 045343          649 KPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIE  727 (813)
Q Consensus       649 k~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~  727 (813)
                      ||+|||++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999999999987765443333344567889999999998899999999999999999998 99999755


Q ss_pred             cchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          728 MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       728 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ......  .    ......         .........++.+.+++.+||+.||.+|||+.||+++|+.+...
T Consensus       279 ~~~~~~--~----~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          279 PVDANF--Y----KLIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CCSHHH--H----HHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CcHHHH--H----HHHhcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            432211  1    111111         00111122357789999999999999999999999999886643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=341.44  Aligned_cols=253  Identities=25%  Similarity=0.332  Sum_probs=206.8

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ...|.+.+.||+|+||.||++...   .++..||||.++.....      ..+++.+|+.++++++||||+++++++.+.
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREK---STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   86 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccceEeceEEeeCCCeEEEEEEEC---CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            456788899999999999999874   35789999998754322      245688999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----CEEEeecc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----NARISDFG  667 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----~~kl~DfG  667 (813)
                      ...++||||+++++|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            99999999999999999998888899999999999999999999964   999999999999999877    89999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      +++.......   .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+...   ....    ..
T Consensus       164 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~~~~----~~  233 (326)
T 2y0a_A          164 LAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---NVSA----VN  233 (326)
T ss_dssp             TCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HHHH----TC
T ss_pred             CCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHHh----cC
Confidence            9987654322   234569999999999999899999999999999999999999997544322111   0000    00


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      . .     .........+..+.+++.+||+.||.+|||+.|++++
T Consensus       234 ~-~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          234 Y-E-----FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             C-C-----CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             C-C-----cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0 0     0000011234678899999999999999999999975

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4e-38  Score=342.15  Aligned_cols=259  Identities=18%  Similarity=0.193  Sum_probs=206.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||.+...  ...+++.+|+.+++++ +|+||+++++++..++..++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNL---YTNEYVAIKLEPMK--SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEET---TTTEEEEEEEEETT--CSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEeeccCCceEEEEEEC---CCCcEEEEEEeccc--cchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            3567789999999999999863   46789999998653  3345789999999999 9999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC-----EEEeeccCcccc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-----ARISDFGLAKLL  672 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~DfGla~~~  672 (813)
                      ||+ +++|.+++.. ...+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.     +||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            999 9999999976 46789999999999999999999964   9999999999999998887     999999999876


Q ss_pred             ccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          673 TLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       673 ~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      .......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......................
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~  240 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP  240 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC
Confidence            5433211     12346799999999999999999999999999999999999999986543222111111111000000


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ...+         ....+ .+.+++..||+.||.+||++++|++.|+.+.
T Consensus       241 ~~~~---------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          241 IEVL---------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHHH---------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHH---------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            0000         00123 8899999999999999999999999997654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.2e-38  Score=360.83  Aligned_cols=249  Identities=26%  Similarity=0.376  Sum_probs=203.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC-ceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-NRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~~lV~  598 (813)
                      .+.+.++||+|+||.||+|..     .+..||||.++..  ...++|.+|+.+|++++||||+++++++.+.+ ..++||
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~-----~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEESSC--TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             HeEEEeeecCcCCeeEEEEEe-----cCCeEEEEEeCCc--hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            456678999999999999987     4668999999753  35678999999999999999999999987665 789999


Q ss_pred             eecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.+++....  .+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-  342 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  342 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence            9999999999997653  378999999999999999999964   9999999999999999999999999999864432 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                          .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   ..    +..+         
T Consensus       343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~---~~----i~~~---------  402 (450)
T 1k9a_A          343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---PR----VEKG---------  402 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH---HH----HHTT---------
T ss_pred             ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HH----HHcC---------
Confidence                122357889999999999999999999999999999998 99999754332211   11    1111         


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ........++..+.+++.+||+.||.+|||+.+|++.|+.+..-
T Consensus       403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            01111223467889999999999999999999999999987643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.4e-38  Score=344.91  Aligned_cols=259  Identities=25%  Similarity=0.410  Sum_probs=204.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCc-ceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTS-TTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~-~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.+.||+|+||.||+|....+... ...|++|.+.... ....+++.+|+.++++++|+||+++++++. ++..++|
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v   92 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV   92 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence            456778999999999999987543221 2347888875432 333467888999999999999999999986 5678999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +||+++|+|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            9999999999999764 5789999999999999999999965   99999999999999999999999999999876554


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .........++..|+|||++.+..++.++||||||+++|||++ |+.||......+....       .....  ..    
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-------~~~~~--~~----  236 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-------LEKGE--RL----  236 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH-------HHTTC--BC----
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH-------HHcCC--CC----
Confidence            4333445668889999999998899999999999999999999 9999976543322111       11110  00    


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         .........+.+++.+||+.||.+||++.|++++|+.+..
T Consensus       237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence               0011123457789999999999999999999999987653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=6.4e-39  Score=347.18  Aligned_cols=263  Identities=22%  Similarity=0.357  Sum_probs=194.4

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCce-
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR-  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  594 (813)
                      ...+.+.+.||+|+||.||+|....++.....||||+++..  .....+++.+|+.++++++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            34577889999999999999987644433458999998653  233456789999999999999999999999877655 


Q ss_pred             -----EEEEeecCCCchhhhhhccC------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          595 -----LLVYEFLNNGTLASFLFGNL------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       595 -----~lV~e~~~~gsL~~~l~~~~------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                           ++|+||+++|+|.+++....      .+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence                 99999999999999996432      589999999999999999999964   9999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+...   .   .
T Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~---~---~  252 (323)
T 3qup_A          179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN---Y---L  252 (323)
T ss_dssp             CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH---H---H
T ss_pred             eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH---H---H
Confidence            99999987655433322334557889999999999999999999999999999999 999997544322111   0   0


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      .....          .......++.+.+++.+||+.||.+|||+.++++.|++++.-
T Consensus       253 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          253 IGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            00000          011123457789999999999999999999999999987644

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=335.62  Aligned_cols=268  Identities=20%  Similarity=0.251  Sum_probs=208.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCC--ceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--NRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~l  596 (813)
                      .|.+.+.||+|+||+||+|...   .+++.||||+++... ....+.+.+|++++++++||||+++++++....  ..++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEEC---CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            3667889999999999999874   357799999997543 233456789999999999999999999987655  7799


Q ss_pred             EEeecCCCchhhhhhccCC---CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE----cCCCCEEEeeccCc
Q 045343          597 VYEFLNNGTLASFLFGNLK---PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLA  669 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~---l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGla  669 (813)
                      ||||+++++|.+++.....   +++..++.++.||++||+|||+.   +|+||||||+|||+    +.++.+||+|||++
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            9999999999999976543   89999999999999999999964   99999999999999    77888999999999


Q ss_pred             cccccCcccceeecccccccccCccccc--------CCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hhhhHHHHH
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFR--------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF  740 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~--------~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~~l~~~~~  740 (813)
                      +.......   .....||+.|+|||++.        +..++.++||||||+++|||++|+.||....... ...+.....
T Consensus       164 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  240 (319)
T 4euu_A          164 RELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII  240 (319)
T ss_dssp             EECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred             eecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence            87654432   23456999999999986        5678899999999999999999999997543321 111111111


Q ss_pred             HhhccCcccccc---c------cc--ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          741 DCYRNEKLDDLV---E------GD--MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       741 ~~~~~~~~~~~~---~------~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..........+.   .      ..  ............+.+++.+||+.||++|||++|++++..+.
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            111111111100   0      00  11122346778899999999999999999999999998754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.2e-38  Score=334.59  Aligned_cols=262  Identities=18%  Similarity=0.222  Sum_probs=209.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++...  ...+++.+|+.++.++ +|+|++++++++.+....++||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNL---LNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEEC---CCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            4677889999999999999863   46789999998643  3456788999999999 7999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC-----EEEeeccCcccc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-----ARISDFGLAKLL  672 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~DfGla~~~  672 (813)
                      ||+ +++|.+++... ..+++..++.++.||++||+|||+   .+|+||||||+|||++.++.     +||+|||+++..
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            999 99999999764 458999999999999999999995   59999999999999987766     999999999877


Q ss_pred             ccCccc-----ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          673 TLNQSK-----AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       673 ~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T 1csn_A          162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  241 (298)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence            644321     112345699999999999999999999999999999999999999986443221111111111100000


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ...+         ....++.+.+++.+||+.||.+||++++|++.|+++.+-
T Consensus       242 ~~~~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          242 LREL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHH---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            0000         112357889999999999999999999999999987654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.5e-38  Score=352.40  Aligned_cols=254  Identities=22%  Similarity=0.280  Sum_probs=205.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ...|.+.++||+|+||.||++...   .++..+|+|++....  ....+.+.+|+.++++++||||+++++++.+++..+
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   86 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKV---LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY   86 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEET---TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEEC---CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence            456788899999999999999874   467899999986532  223456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCcccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLL  672 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~~  672 (813)
                      +||||+++|+|.+++.....+++..+..++.||++||.|||+.   +|+||||||+|||++   .++.+||+|||+++..
T Consensus        87 lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~  163 (444)
T 3soa_A           87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV  163 (444)
T ss_dssp             EEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence            9999999999999999888899999999999999999999964   999999999999998   5678999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......+..       .....+... ..
T Consensus       164 ~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~-------~~i~~~~~~-~~  233 (444)
T 3soa_A          164 EGEQQA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY-------QQIKAGAYD-FP  233 (444)
T ss_dssp             CTTCCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHTCCC-CC
T ss_pred             cCCCce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH-------HHHHhCCCC-CC
Confidence            544322  23467999999999999989999999999999999999999999754432211       111111110 00


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+     .....++.+.+++.+||+.||.+|||+.|++++
T Consensus       234 ~~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          234 SP-----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             TT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            00     011235678899999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=6.4e-39  Score=341.26  Aligned_cols=257  Identities=24%  Similarity=0.404  Sum_probs=205.5

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCC----cceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRT----STTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      +....+.+.+.||+|+||.||+|....+..    ....||+|.+........+++.+|+.++++++||||+++++++.++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            344567788999999999999998864321    1357999999776556667899999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCC-CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC--------EE
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLK-PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN--------AR  662 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~-l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~--------~k  662 (813)
                      +..++||||+++++|.+++..... +++..++.++.||++||.|||+.   +|+||||||+|||++.++.        +|
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence            999999999999999999977644 89999999999999999999964   9999999999999998887        99


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |+|||++......      ....++..|+|||++.+ ..++.++||||||+++|||++|..|+..........  ... .
T Consensus       162 l~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~--~~~-~  232 (289)
T 4fvq_A          162 LSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL--QFY-E  232 (289)
T ss_dssp             ECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHH-H
T ss_pred             eccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH--HHh-h
Confidence            9999999765432      23457889999999987 678999999999999999999655544332211110  000 0


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        ......            ......+.+++.+||+.||.+|||+.|++++|+.+..
T Consensus       233 --~~~~~~------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          233 --DRHQLP------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             --TTCCCC------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             --ccCCCC------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence              000000            0113457899999999999999999999999998865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.4e-38  Score=335.22  Aligned_cols=252  Identities=31%  Similarity=0.456  Sum_probs=193.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc----ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ----DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+.+.+.||+|+||.||+|..     .+..||||+++....    ...+.+.+|++++++++||||+++++++.+++..+
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFW-----IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE-----TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             heeeeeeeccCCCeEEEEEEE-----cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            466778999999999999986     467899999865322    22356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC--------CCCEEEeecc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--------YYNARISDFG  667 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~--------~~~~kl~DfG  667 (813)
                      +||||+++++|.+++.. ..+++..++.++.|+++||.|||+....+|+||||||+|||++.        ++.+||+|||
T Consensus        83 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            99999999999999864 47899999999999999999999762223999999999999986        7789999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      +++......    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........      ..... .
T Consensus       162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~~~~~-~  230 (271)
T 3dtc_A          162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------GVAMN-K  230 (271)
T ss_dssp             C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------HHHTS-C
T ss_pred             ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------hhhcC-C
Confidence            998665432    223468999999999999899999999999999999999999997543321110      11111 0


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      .        ........++.+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       231 ~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          231 L--------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             C--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             C--------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            0        0111123457789999999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=6.3e-39  Score=349.04  Aligned_cols=274  Identities=25%  Similarity=0.382  Sum_probs=213.4

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEecc----CCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTT----RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      ++....+.+.+.||+|+||.||+|.....    ..++..||||+++... ....+++.+|+.+++++ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            34445677889999999999999987431    1356789999997542 22345688999999999 899999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      .+.+..++||||+++|+|.+++....                .+++..++.++.||++||.|||+.   +|+||||||+|
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  187 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN  187 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence            99999999999999999999997643                378999999999999999999964   99999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ||++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  267 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  267 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence            9999999999999999987664433222334457889999999988889999999999999999999 999997543322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCCCCCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYP  807 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~~p~~  807 (813)
                      ..   ...    ......         .........+.+++.+||+.||.+|||+.|+++.|++++..........
T Consensus       268 ~~---~~~----~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~~~~  327 (334)
T 2pvf_A          268 LF---KLL----KEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD  327 (334)
T ss_dssp             HH---HHH----HHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC------
T ss_pred             HH---HHH----hcCCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCcccC
Confidence            11   111    111000         0112345678899999999999999999999999999876644443333

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=6.7e-38  Score=346.97  Aligned_cols=255  Identities=24%  Similarity=0.314  Sum_probs=202.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      .+++.++||+|+||.||++...   .+++.+|||+++...   ....+.+..|..++.++ +||||+++++++.+.+..+
T Consensus        53 ~y~~~~~LG~G~fG~V~~~~~~---~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           53 DFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             HcEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            4677899999999999999874   467899999997542   22344578899999887 8999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus       130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            9999999999999999888899999999999999999999964   9999999999999999999999999999864322


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh--hhhHHHHHHhhccCccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...  ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.  ..............       
T Consensus       207 ~~~--~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------  277 (396)
T 4dc2_A          207 GDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------  277 (396)
T ss_dssp             TCC--BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-------
T ss_pred             CCc--cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-------
Confidence            211  3456799999999999999999999999999999999999999974332111  00011111111111       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM------KKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  792 (813)
                       ....  +......+.+++.+||+.||.+||++      .||+++
T Consensus       278 -~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          278 -QIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             -CCCC--CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             -ccCC--CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence             1111  11235678899999999999999985      566654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-38  Score=341.14  Aligned_cols=251  Identities=20%  Similarity=0.290  Sum_probs=204.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|.+.++||+|+||.||++...   .++..+|+|.++.. ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVET---SSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ceEeeeEEecCCCeEEEEEEEC---CCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            4667889999999999999874   46789999998643 2334568899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC--CCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++++|.+++... ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.  ++.+||+|||+++......
T Consensus        82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            99999999999765 4789999999999999999999964   9999999999999987  7899999999998875433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..   ..+..    ....  ...  
T Consensus       159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~----~~~~--~~~--  224 (321)
T 1tki_A          159 N---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII---ENIMN----AEYT--FDE--  224 (321)
T ss_dssp             E---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHH----TCCC--CCH--
T ss_pred             c---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH---HHHHc----CCCC--CCh--
Confidence            2   33456899999999999888899999999999999999999999765432211   11110    0000  000  


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        ......+..+.+++.+||+.||.+|||+.|++++-
T Consensus       225 --~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          225 --EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             --HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             --hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence              00012356788999999999999999999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.2e-38  Score=339.19  Aligned_cols=264  Identities=23%  Similarity=0.313  Sum_probs=198.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeec--cccCCcceEEeEeec----CC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ--THHKNLVRLLGFCDE----GQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~----~~  592 (813)
                      ..+.+.+.||+|+||+||+|..     ++..||||++...   ..+.+..|.+++..  ++||||+++++++..    ..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW-----QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE-----CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence            4567789999999999999986     5778999998643   33455566666655  799999999998654    34


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-----SAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      ..++||||+++|+|.+++.. ..+++..+++++.||++||+|||...     ..+|+||||||+|||++.++.+||+|||
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  158 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG  158 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             eeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence            57999999999999999954 46899999999999999999999321     3599999999999999999999999999


Q ss_pred             CccccccCcccc--eeecccccccccCcccccCC------CCCCccchhhHHHHHHHHHhC----------CcCCCcccc
Q 045343          668 LAKLLTLNQSKA--IRTAIRGTKGYVAPEWFRNS------TITAKVDVYSFGVLLLEIISC----------RKSFDIEMG  729 (813)
Q Consensus       668 la~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~------~~~~k~DVwS~Gvvl~elltG----------~~p~~~~~~  729 (813)
                      +++.........  ......||+.|+|||++.+.      .++.++||||||+++|||++|          +.||.....
T Consensus       159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~  238 (301)
T 3q4u_A          159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP  238 (301)
T ss_dssp             TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence            998765433221  12234799999999999876      445789999999999999999          777754322


Q ss_pred             hhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       730 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..... .. ...............   ...........+.+++.+||+.||.+|||+.||++.|+++
T Consensus       239 ~~~~~-~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          239 NDPSF-ED-MRKVVCVDQQRPNIP---NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SSCCH-HH-HHHHHTTSCCCCCCC---GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcch-hh-hhHHHhccCCCCCCC---hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            11110 00 011111111110000   0111235678899999999999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=339.90  Aligned_cols=251  Identities=30%  Similarity=0.494  Sum_probs=196.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+++.+.||+|+||.||+|..     .+..||||+++.  ....+.+.+|++++++++||||+++++++.+  ..++|||
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e   79 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKW-----RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME   79 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-----TTEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred             HeeeeeEeecCCCceEEEEEE-----CCeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence            456778999999999999987     457899999864  2345678999999999999999999998873  5899999


Q ss_pred             ecCCCchhhhhhccC---CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC-EEEeeccCccccccC
Q 045343          600 FLNNGTLASFLFGNL---KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN-ARISDFGLAKLLTLN  675 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~-~kl~DfGla~~~~~~  675 (813)
                      |+++++|.+++....   .+++..++.++.||++||+|||+....+|+||||||+|||++.++. +||+|||++......
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            999999999998654   4678899999999999999999643368999999999999998886 799999999765432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                           .....||+.|+|||++.+..++.++||||||+++|||++|+.||...........    ... .......     
T Consensus       160 -----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~-----  224 (307)
T 2eva_A          160 -----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAV-HNGTRPP-----  224 (307)
T ss_dssp             ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH----HHH-HTTCCCC-----
T ss_pred             -----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH----HHH-hcCCCCC-----
Confidence                 2234589999999999999999999999999999999999999975433221111    011 1111111     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                          .....+..+.+++.+||+.||.+|||+.|++++|+.+.+
T Consensus       225 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          225 ----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             ----CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             ----cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence                111235678899999999999999999999999988654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-38  Score=336.64  Aligned_cols=261  Identities=25%  Similarity=0.430  Sum_probs=206.7

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCce-EEEEe
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR-LLVYE  599 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-~lV~e  599 (813)
                      ...++||+|+||+||+|....+......+|||.++.... ...+.+.+|+.++++++||||+++++++.+.+.. ++|+|
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            345889999999999999876666667899999875332 2345788999999999999999999999876665 99999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+.+++|.+++.. ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY  180 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence            9999999999976 45688999999999999999999965   9999999999999999999999999999866443211


Q ss_pred             --ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          679 --AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       679 --~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                        .......++..|+|||.+.+..++.++||||||+++|||++|..|+........  +.....    ...         
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~----~~~---------  245 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--LTHFLA----QGR---------  245 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--HHHHHH----TTC---------
T ss_pred             ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--HHHHhh----cCC---------
Confidence              112345688999999999999999999999999999999996666543222111  111111    000         


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ........++.+.+++.+||+.||.+|||+.++++.|+.+++..
T Consensus       246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            00111223567899999999999999999999999998876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.7e-38  Score=359.88  Aligned_cols=258  Identities=28%  Similarity=0.423  Sum_probs=204.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.+.++||+|+||.||+|...    ....||||+++... ...++|.+|+.+|++++||||+++++++.+ +..++|
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             hhHceeeeeecCCCCeEEEEEEEC----CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            345677889999999999999874    34679999997543 335679999999999999999999999876 678999


Q ss_pred             EeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++|+|.+++...  ..+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            9999999999999753  5689999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..       .....+        
T Consensus       334 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-------~~i~~~--------  397 (452)
T 1fmk_A          334 EYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-------DQVERG--------  397 (452)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-------HHHHTT--------
T ss_pred             ceec-ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcC--------
Confidence            2211 233457789999999998899999999999999999999 99999754332211       111111        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                       ........+++.+.+++.+||+.||++|||+++|++.|+.+.....
T Consensus       398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence             0111122446788999999999999999999999999999876543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6.6e-38  Score=351.61  Aligned_cols=253  Identities=20%  Similarity=0.217  Sum_probs=202.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +++.++||+|+||+||+|...   ..++.||||+++...   ......+.+|+.++.+++|+||+++++++.+.+..+||
T Consensus        76 y~~~~~LG~G~fG~V~~~~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           76 FEILKVIGRGAFGEVAVVKLK---NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEEeCCCEEEEEEEEc---CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence            455688999999999999884   357899999997532   22334588999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++.. ...+++..++.++.||+.||.|||+   .+|+||||||+||||+.++.+||+|||+++......
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence            999999999999987 5789999999999999999999995   499999999999999999999999999998765443


Q ss_pred             ccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ... ....+||+.|+|||++.     ...++.++|||||||++|||++|+.||......+...   .+.....     .+
T Consensus       230 ~~~-~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~---~i~~~~~-----~~  300 (437)
T 4aw2_A          230 TVQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG---KIMNHKE-----RF  300 (437)
T ss_dssp             CEE-CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHTHHH-----HC
T ss_pred             Ccc-cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH---hhhhccc-----cc
Confidence            221 33467999999999997     4568999999999999999999999998654322111   0100000     00


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  792 (813)
                      .-+..    .....+.+.+|+.+||..+|++  ||+++|++++
T Consensus       301 ~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          301 QFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             CCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             cCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            00000    0123567889999999888888  9999999975

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=348.82  Aligned_cols=251  Identities=24%  Similarity=0.337  Sum_probs=200.4

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      +....+++.+.||+|+||.||+|...   .+++.||||+++..   .....+.+.+|..++.++ +||||+++++++.+.
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVK---ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP   96 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEc---CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence            34445778899999999999999874   45789999999753   223345678899999988 799999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +..++||||+++|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+++.
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence            99999999999999999999888899999999999999999999964   999999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .......  ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .   ... ..     
T Consensus       174 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~---~i~-~~-----  239 (353)
T 3txo_A          174 GICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF---E---AIL-ND-----  239 (353)
T ss_dssp             SCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H---HHH-HC-----
T ss_pred             cccCCcc--ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH---H---HHH-cC-----
Confidence            4432221  34567999999999999889999999999999999999999999765432211   1   111 11     


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM------KKVLQ  791 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~  791 (813)
                         ....  .......+.+++.+||+.||.+||++      .|+++
T Consensus       240 ---~~~~--p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          240 ---EVVY--PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ---CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ---CCCC--CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence               1110  11234678899999999999999998      77775

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=8.3e-38  Score=336.65  Aligned_cols=260  Identities=22%  Similarity=0.296  Sum_probs=198.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|++.++||+|+||+||+|...    +++.||||++.....  ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDS----QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEET----TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             hhHhhhhccCCCCeEEEEEEEC----CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            4667789999999999999873    578899999865322  2235688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++ +|.+++... ..+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        98 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           98 FEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             EcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            999985 777777554 5689999999999999999999964   99999999999999999999999999998765332


Q ss_pred             ccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccccc--
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDD--  750 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~--  750 (813)
                      ..  .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....   .......   .....  
T Consensus       174 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          174 RS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK---IFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             C-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH---HHHHHCCCCTTTSGGGT
T ss_pred             cc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHHCCCChHHhhhhh
Confidence            21  234568999999999876 5689999999999999999999999976544332111   1111110   00000  


Q ss_pred             -----------cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 -----------LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 -----------~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                 ..+............+++.+++.+||+.||.+|||++|++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                       000000000011234678899999999999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=7.7e-38  Score=343.99  Aligned_cols=254  Identities=22%  Similarity=0.307  Sum_probs=206.6

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ....|.+.+.||+|+||.||+|...   .++..||||++....  ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  103 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH  103 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEEC---CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3566888999999999999999874   467899999997532  22345688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC---CCEEEeeccCccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGLAKL  671 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~---~~~kl~DfGla~~  671 (813)
                      ++||||+++|+|.+++.....+++..+..++.||++||.|||+.   +|+||||||+|||++.+   +.+||+|||++..
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            99999999999999998888899999999999999999999964   99999999999999865   4599999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ......   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.   ...+    ..+... .
T Consensus       181 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---~~~i----~~~~~~-~  249 (362)
T 2bdw_A          181 VNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL---YAQI----KAGAYD-Y  249 (362)
T ss_dssp             CTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHH----HHTCCC-C
T ss_pred             ecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHH----HhCCCC-C
Confidence            654322   2346799999999999998999999999999999999999999975433211   1111    111110 0


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..     ......+..+.+++.+||+.||.+||++.|++++
T Consensus       250 ~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 PS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CT-----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             Cc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00     0011235678899999999999999999999865

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.2e-38  Score=334.48  Aligned_cols=249  Identities=23%  Similarity=0.330  Sum_probs=195.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--------------------------ccchhhhheeeee
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--------------------------DGEKEFKNEVVVI  573 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l  573 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++.....                          ...+++.+|++++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNE---NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEET---TTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             ceEEEeEEeecCCEEEEEEEEC---CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            4667889999999999999874   4678999999864321                          1235688999999


Q ss_pred             eccccCCcceEEeEeec--CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCC
Q 045343          574 GQTHHKNLVRLLGFCDE--GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQ  651 (813)
Q Consensus       574 ~~l~h~niv~l~g~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~  651 (813)
                      ++++||||+++++++.+  ....++||||+++++|.+++. ...+++..++.++.||++||+|||+.   +|+||||||+
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~  166 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS  166 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence            99999999999999976  567899999999999988764 35689999999999999999999965   9999999999


Q ss_pred             cEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCC---CCCccchhhHHHHHHHHHhCCcCCCccc
Q 045343          652 NILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST---ITAKVDVYSFGVLLLEIISCRKSFDIEM  728 (813)
Q Consensus       652 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~k~DVwS~Gvvl~elltG~~p~~~~~  728 (813)
                      |||++.++.+||+|||+++........  .....||+.|+|||.+.+..   .+.++||||||+++|||++|+.||....
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HEEECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            999999999999999999876543221  34457999999999997765   3778999999999999999999997543


Q ss_pred             chhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          729 GEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       729 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....   ..    .......        .........+.+.+++.+||+.||++|||+.|++++
T Consensus       245 ~~~~---~~----~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          245 IMCL---HS----KIKSQAL--------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHH---HH----HHHHCCC--------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHH---HH----HHhcccC--------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            2111   01    1111110        001111235678999999999999999999999764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1e-37  Score=332.74  Aligned_cols=262  Identities=21%  Similarity=0.275  Sum_probs=200.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++.....  ..+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeeeEecCCCCeEEEEEEEC---CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            567789999999999999874   35788999999754322  2356889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||++++.+..+......+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        81 e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred             ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence            9998755555555567899999999999999999999965   9999999999999999999999999999876533221


Q ss_pred             ceeecccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccccccc--
Q 045343          679 AIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDDLV--  752 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~--  752 (813)
                        .....||+.|+|||++.+.. ++.++||||||+++|||++|..|+......... + .........   +......  
T Consensus       158 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~-~-~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          158 --YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-L-KRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             --CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH-H-HHHHHHHCCCCTTTCTTGGGS
T ss_pred             --ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH-H-HHHHHHhCCCChhhhhhhccc
Confidence              33456899999999998765 799999999999999999988886443322111 1 111111111   0000000  


Q ss_pred             -c---------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 -E---------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 -~---------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       +         ..............+.+++.+||+.||++|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence             0         000000112345778899999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8.1e-38  Score=329.10  Aligned_cols=252  Identities=21%  Similarity=0.310  Sum_probs=202.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC--Cce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~  594 (813)
                      ..+.+.+.||+|+||.||+|..     .+..||||+++...  ....+++.+|+.++++++||||+++++++.+.  ...
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW-----QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             HHhHHHHHhcCCCcceEEEEEE-----CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            3567788999999999999987     46789999987532  23345789999999999999999999999877  678


Q ss_pred             EEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++||||+++|+|.+++....  .+++..++.++.||++||.|||+. ...|+||||||+||+++.++.++|.|||++...
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            99999999999999998765  489999999999999999999954 222999999999999999999999999887643


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCC---ccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITA---KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~---k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      .       .....||+.|+|||.+.+...+.   ++||||||+++|||++|+.||.........      ..........
T Consensus       164 ~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~~  230 (271)
T 3kmu_A          164 Q-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG------MKVALEGLRP  230 (271)
T ss_dssp             S-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH------HHHHHSCCCC
T ss_pred             c-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH------HHHHhcCCCC
Confidence            2       22345899999999998765544   799999999999999999999754332211      0111111000


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                               ......+..+.+++..||+.||.+|||+.|+++.|+.+.+
T Consensus       231 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          231 ---------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                     1112345678999999999999999999999999988753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.4e-38  Score=340.42  Aligned_cols=246  Identities=24%  Similarity=0.355  Sum_probs=203.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||+|...   ..+..||||++....   ....+.+.+|+.+++.++||||+++++++......++
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHY---KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4677899999999999999874   367789999986532   2234578899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+ +|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||++.......
T Consensus        87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            99999 789999998888899999999999999999999965   99999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .   .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........               ...+....
T Consensus       163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~~i~~~~  224 (336)
T 3h4j_B          163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FKKVNSCV  224 (336)
T ss_dssp             T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BCCCCSSC
T ss_pred             c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HHHHHcCC
Confidence            2   234569999999999988776 6899999999999999999999975432110               01111111


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  .....+..+.+++.+||+.||.+|||+.|++++
T Consensus       225 ~~--~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          225 YV--MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CC--CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             CC--CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            11  111235678899999999999999999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.7e-38  Score=337.94  Aligned_cols=270  Identities=21%  Similarity=0.289  Sum_probs=202.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCce-
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR-  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~-  594 (813)
                      ..|.+.+.||+|+||.||++...   .+++.||||+++.....   ....+.+|+.++++++||||+++++++...... 
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDL---RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred             CcEEEEEEEccCCCEEEEEEEEC---CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence            34677899999999999999874   46789999999754222   234688999999999999999999998765544 


Q ss_pred             ---EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          595 ---LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       595 ---~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                         ++||||+++++|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             cccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence               99999999999999998888899999999999999999999965   999999999999999999999999999987


Q ss_pred             cccCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          672 LTLNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       672 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.........      .......... 
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~~~~~~~-  238 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA------YQHVREDPIP-  238 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHHCCCCC-
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhcCCCCC-
Confidence            6543222 1123456899999999999999999999999999999999999999765432211      1111111000 


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHH-HHHHhcCcCCCCCCCCCC
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKV-LQMLEGVVEVSLPPNPYP  807 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev-l~~L~~~~~~~~p~~p~~  807 (813)
                         +   .......+..+.+++.+||+.||.+||++.++ ...|..+.....|+.|..
T Consensus       239 ---~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~  290 (311)
T 3ork_A          239 ---P---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKV  290 (311)
T ss_dssp             ---H---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCCC
T ss_pred             ---c---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCcc
Confidence               0   00011235678899999999999999965554 456666555544444433

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.2e-38  Score=341.49  Aligned_cols=282  Identities=23%  Similarity=0.342  Sum_probs=210.8

Q ss_pred             CHHHHHHHHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEee
Q 045343          512 SYKELEEATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       512 ~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      ...++....+++.++||+|+||.||+|.... +...++.||||+++... ....+.+.+|+.++++++|+||+++++++.
T Consensus        14 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (302)
T 4e5w_A           14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT   93 (302)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            3334445557788999999999999998532 23467899999997532 233467899999999999999999999998


Q ss_pred             cC--CceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeec
Q 045343          590 EG--QNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDF  666 (813)
Q Consensus       590 ~~--~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df  666 (813)
                      +.  ...++||||+++++|.+++.. ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+||
T Consensus        94 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df  170 (302)
T 4e5w_A           94 EDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF  170 (302)
T ss_dssp             C---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcc
Confidence            76  668999999999999999954 46789999999999999999999964   9999999999999999999999999


Q ss_pred             cCccccccCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          667 GLAKLLTLNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       667 Gla~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      |++......... .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+.............. ......
T Consensus       171 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~  249 (302)
T 4e5w_A          171 GLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT-HGQMTV  249 (302)
T ss_dssp             TTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC-CGGGHH
T ss_pred             cccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCc-ccccCH
Confidence            999877654322 112345688889999999988899999999999999999999988643211000000000 000000


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ..+...+............++.+.+++.+||+.||.+|||+.|+++.|+.++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          250 TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0000001111111122234578999999999999999999999999998865

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=9e-38  Score=337.01  Aligned_cols=245  Identities=24%  Similarity=0.307  Sum_probs=203.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+||.||++...   .+++.||||+++...   ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSR---HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             HcEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            4667889999999999999874   467899999997532   2234567889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-  159 (318)
T 1fot_A           84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-  159 (318)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence            99999999999999988889999999999999999999995   59999999999999999999999999999875432 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........      ..... .        ..
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------~~i~~-~--------~~  220 (318)
T 1fot_A          160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY------EKILN-A--------EL  220 (318)
T ss_dssp             ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------HHHHH-C--------CC
T ss_pred             ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------HHHHh-C--------CC
Confidence                23457999999999999999999999999999999999999999754332111      01111 1        11


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      ..  .......+.+++.+||+.||.+||     +++||+++
T Consensus       221 ~~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          221 RF--PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             CC--CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CC--CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            10  112346788999999999999999     89999854

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.6e-37  Score=330.11  Aligned_cols=252  Identities=27%  Similarity=0.497  Sum_probs=200.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-------chhhhheeeeeeccccCCcceEEeEeecC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-------EKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ..+.+.+.||+|+||.||+|...   .+++.||||++.......       .+++.+|+.++++++|+||+++++++.+.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLV---KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEET---TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             ccceehhccccCCceeEEEEEEc---CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            45677899999999999999874   367889999986433221       15688999999999999999999998665


Q ss_pred             CceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeCCCCCCcEEEcCCCC-----EEE
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQ--IIHCDIKPQNILLDDYYN-----ARI  663 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~--ivH~dlk~~NIll~~~~~-----~kl  663 (813)
                      .  ++||||+++++|.+++... ..+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.     +||
T Consensus        96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl  170 (287)
T 4f0f_A           96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV  170 (287)
T ss_dssp             T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred             C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence            4  7999999999998888654 5789999999999999999999954   7  999999999999988776     999


Q ss_pred             eeccCccccccCcccceeecccccccccCccccc--CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR--NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      +|||+++.....     .....||+.|+|||.+.  ...++.++||||||+++|||++|+.||............. .  
T Consensus       171 ~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~-~--  242 (287)
T 4f0f_A          171 ADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM-I--  242 (287)
T ss_dssp             CCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHH-H--
T ss_pred             CCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHH-H--
Confidence            999999754432     34467899999999984  4457889999999999999999999997554332211111 0  


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                        ......        .......+..+.+++.+||+.||.+|||+.||++.|+++
T Consensus       243 --~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          243 --REEGLR--------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             --HHSCCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             --hccCCC--------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence              001111        111123457889999999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=7.4e-38  Score=339.46  Aligned_cols=253  Identities=21%  Similarity=0.258  Sum_probs=198.6

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ...+++.+.||+|+||.||++....+...++.||||+++...    ......+.+|+.++++++||||+++++++.+.+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            345778899999999999999886555678899999997532    2234567889999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            999999999999999998888899999999999999999999965   99999999999999999999999999998654


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .....  .....||+.|+|||++.+..++.++||||||+++|||++|+.||.........   ..+..    .       
T Consensus       173 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~----~-------  236 (327)
T 3a62_A          173 HDGTV--THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILK----C-------  236 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHH----T-------
T ss_pred             cCCcc--ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHh----C-------
Confidence            32221  33457999999999999989999999999999999999999999754432211   11110    0       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                       ...  ........+.+++.+||+.||.+||     ++.|++++
T Consensus       237 -~~~--~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          237 -KLN--LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             -CCC--CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             -CCC--CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence             000  0112356788999999999999999     78888864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.5e-38  Score=344.93  Aligned_cols=277  Identities=25%  Similarity=0.346  Sum_probs=211.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee--cCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD--EGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~  595 (813)
                      ..+.+.++||+|+||.||++.... +...+..||||++........+.+.+|++++++++|+||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            456778999999999999998532 23467899999997655555667999999999999999999999886  455688


Q ss_pred             EEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+++++|.+++.. ...+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            99999999999999976 45689999999999999999999964   999999999999999999999999999987754


Q ss_pred             Ccccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... ......+|..|+|||.+.+..++.++||||||+++|||++|+.||.....+...... ..........+.+.+.
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  258 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG-CERDVPALSRLLELLE  258 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-----CCHHHHHHHHHH
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc-cccccccHHHHHHHhh
Confidence            43221 123345888899999999888999999999999999999999998643321110000 0000000000011111


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ...........++.+.+++.+||+.||.+|||+.|++++|+.+...
T Consensus       259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            1111122334567899999999999999999999999999987643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-38  Score=347.55  Aligned_cols=260  Identities=25%  Similarity=0.499  Sum_probs=197.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeec-CCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~  598 (813)
                      +.+.+.||+|+||.||+|...........||||.++.... ...+++.+|+.++++++||||+++++++.+ +...++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            4566889999999999999865555567899999865322 334678999999999999999999998754 45789999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            999999999999765 4578999999999999999999964   999999999999999999999999999987644322


Q ss_pred             cc--eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          678 KA--IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       678 ~~--~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..  ......++..|+|||.+.+..++.++||||||+++|||++ |.+||......+...   ...    ...  ..   
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~---~~~----~~~--~~---  315 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV---YLL----QGR--RL---  315 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH---HHH----TTC--CC---
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH---HHH----cCC--CC---
Confidence            11  1233457889999999999999999999999999999999 677776443322111   100    110  00   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                          .....++..+.+++.+||+.||.+|||+.|+++.|+.+...
T Consensus       316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                01122356789999999999999999999999999886643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.3e-38  Score=344.04  Aligned_cols=254  Identities=23%  Similarity=0.286  Sum_probs=203.1

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-----cccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-----QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ....|++.+.||+|+||.||+|...   .+++.||||+++...     ....+.+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINR---ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD   98 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             cccceEEeeEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            4567888999999999999999874   367899999986421     11346789999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEe
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARIS  664 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~  664 (813)
                      +..++||||+++++|.+++...    ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.   +||+
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~  175 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLG  175 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEe
Confidence            9999999999999998887543    3578999999999999999999964   9999999999999986554   9999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      |||+++........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.   . .    ...
T Consensus       176 Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~-~----~i~  245 (351)
T 3c0i_A          176 GFGVAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL---F-E----GII  245 (351)
T ss_dssp             CCTTCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH---H-H----HHH
T ss_pred             cCcceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH---H-H----HHH
Confidence            99999876543221  334579999999999999899999999999999999999999997542111   1 0    000


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....  ..+.    .....++.+.+++.+||+.||.+|||+.|++++
T Consensus       246 ~~~~~--~~~~----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          246 KGKYK--MNPR----QWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HTCCC--CCHH----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCCC--CCcc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            01100  0000    001235678899999999999999999999863

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.6e-38  Score=336.96  Aligned_cols=252  Identities=23%  Similarity=0.255  Sum_probs=196.3

Q ss_pred             CHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          512 SYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       512 ~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      ...++....+++.++||+|+||+||+|...   .+++.||||++.....  ....++..|+..+.++ +|+||+++++++
T Consensus        50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~  126 (311)
T 3p1a_A           50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSK---EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW  126 (311)
T ss_dssp             SSSCHHHHHEEEEEEEEEETTEEEEEEEET---TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CccchhhhheeeeheeccCCCeEEEEEEEC---CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            345667778889999999999999999874   3678999999864322  1223445555555555 899999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .++...++||||+ +++|.+++... ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG  202 (311)
T 3p1a_A          127 EEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG  202 (311)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred             EeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence            9999999999999 66888887654 5689999999999999999999965   99999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      +++.......   .....||++|+|||++.+ .++.++||||||+++|||++|..++.....          ...+....
T Consensus       203 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~  268 (311)
T 3p1a_A          203 LLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGY  268 (311)
T ss_dssp             TCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTC
T ss_pred             eeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccC
Confidence            9987654322   234569999999999876 789999999999999999999777653211          01111111


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..    +.    ......+.+.+++.+||+.||++|||+.|++++
T Consensus       269 ~~----~~----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          269 LP----PE----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             CC----HH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CC----cc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            11    00    111235778999999999999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=8e-38  Score=341.92  Aligned_cols=272  Identities=16%  Similarity=0.171  Sum_probs=203.5

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-----------cchhhhheeeeeeccccCCcceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-----------GEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      +....|.+.++||+|+||.||+|........+..+|||+.......           ..+.+.+|+.++..++|+||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            3345577889999999999999998754457788999998754221           12235677788888999999999


Q ss_pred             EeEeec----CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-
Q 045343          585 LGFCDE----GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-  659 (813)
Q Consensus       585 ~g~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-  659 (813)
                      ++++..    ....++||||+ +++|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++ 
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence            999977    67889999999 999999998877899999999999999999999964   999999999999999877 


Q ss_pred             -CEEEeeccCccccccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh
Q 045343          660 -NARISDFGLAKLLTLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA  733 (813)
Q Consensus       660 -~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~  733 (813)
                       .+||+|||+++.+.......     ......||..|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~  269 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA  269 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence             99999999998775432211     113456999999999999989999999999999999999999999643222111


Q ss_pred             hhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       734 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      .. .. ...... .+......   .......++.+.+++..||+.||.+||++.+|++.|+.+.
T Consensus       270 ~~-~~-~~~~~~-~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          270 VQ-TA-KTNLLD-ELPQSVLK---WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HH-HH-HHHHHH-TTTHHHHH---HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HH-HH-HHhhcc-cccHHHHh---hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            10 00 000000 00000000   0001134568999999999999999999999999998753

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.8e-38  Score=337.66  Aligned_cols=259  Identities=29%  Similarity=0.419  Sum_probs=212.0

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ++....+.+.+.||+|+||.||+|...   ..+..||||.++.. ....+++.+|+.++++++|+||+++++++.+....
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEG---GGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             cccccceeEEeecCCCCceeEEEeEec---CCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            344556778899999999999999885   35788999998753 33456789999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||++...
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM  161 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence            9999999999999999753  4589999999999999999999965   9999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ....... .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||..........   ..    ..      
T Consensus       162 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~---~~----~~------  227 (288)
T 3kfa_A          162 TGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE---LL----EK------  227 (288)
T ss_dssp             CSSSSEE-ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH---HH----HT------
T ss_pred             cCCcccc-ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HH----hc------
Confidence            6443221 334457889999999998899999999999999999999 999987544322111   11    00      


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                         ..........++.+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus       228 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          228 ---DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence               0011111234578899999999999999999999999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-37  Score=345.05  Aligned_cols=251  Identities=25%  Similarity=0.316  Sum_probs=205.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|.+.++||+|+||.||+|...   .++..+|+|.+..........+.+|+.++++++|+||+++++++.+....++|||
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEK---ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEecCCCEEEEEEEEC---CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            4778899999999999999874   3577899999876544445678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC--CCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++|+|.+++... ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.  ++.+||+|||+++......
T Consensus       129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence            99999999999765 4789999999999999999999964   9999999999999974  5789999999998775433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   ..+..    ....  .+.  
T Consensus       206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~~i~~----~~~~--~~~--  271 (387)
T 1kob_A          206 I---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL---QNVKR----CDWE--FDE--  271 (387)
T ss_dssp             C---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---HHHHH----CCCC--CCS--
T ss_pred             c---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH---HHHHh----CCCC--CCc--
Confidence            2   23456999999999999989999999999999999999999999765432111   10100    0000  000  


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        .........+.+++.+||+.||.+|||+.|++++
T Consensus       272 --~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          272 --DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             --STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence              0111235678899999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.2e-38  Score=334.59  Aligned_cols=259  Identities=24%  Similarity=0.343  Sum_probs=206.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||+|........+..||||.++... ....+++.+|+.++++++||||+++++++.+ +..++|
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence            34667789999999999999987666667789999987542 2335678999999999999999999999865 457899


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++++|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            9999999999999764 4589999999999999999999964   99999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..........   ...    .....      
T Consensus       168 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~---~~~----~~~~~------  233 (281)
T 3cc6_A          168 YYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG---VLE----KGDRL------  233 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH---HHH----HTCCC------
T ss_pred             ccc-cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH---HHh----cCCCC------
Confidence            221 233457889999999998899999999999999999998 999997543322111   110    00000      


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         .......+.+.+++.+||+.||.+||++.|++++|+.+.+
T Consensus       234 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          234 ---PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence               0111235678899999999999999999999999988654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.4e-37  Score=346.26  Aligned_cols=252  Identities=18%  Similarity=0.237  Sum_probs=202.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.++||+|+||+||+|...   .+++.||||+++..   .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~---~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l  146 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  146 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEEEEEcCCCEEEEEEEEC---CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            3556789999999999999874   35788999998752   22334568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.. ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+++......
T Consensus       147 V~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~  222 (410)
T 3v8s_A          147 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG  222 (410)
T ss_dssp             EECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence            9999999999999865 4688999999999999999999964   99999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCC----CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNST----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~----~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ... .....||+.|+|||++.+..    ++.++|||||||++|||++|+.||..........   .+.   ....  .  
T Consensus       223 ~~~-~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~---~i~---~~~~--~--  291 (410)
T 3v8s_A          223 MVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS---KIM---NHKN--S--  291 (410)
T ss_dssp             EEE-CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHH---THHH--H--
T ss_pred             ccc-ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH---HHH---hccc--c--
Confidence            211 33567999999999998765    7789999999999999999999998654322111   000   0000  0  


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSL--RPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~  792 (813)
                         +..+.....+..+.+|+.+||+.+|.+  ||+++||+++
T Consensus       292 ---~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          292 ---LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ---CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ---ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence               000011123577889999999999988  9999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.5e-37  Score=342.94  Aligned_cols=250  Identities=24%  Similarity=0.330  Sum_probs=204.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+.+.+.||+|+||.||++...   ..++.||||++....   ....+.+.+|+.++++++|||||++++++.+.+..+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~---~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKN---DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35677899999999999999874   467889999986532   233456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+.+|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            9999999999999999888899999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..   .....||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+.....    ...     
T Consensus       169 ~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----~~~-----  236 (384)
T 4fr4_A          169 TQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----TTV-----  236 (384)
T ss_dssp             CC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH----HCC-----
T ss_pred             Cc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----hcc-----
Confidence            22   345679999999999974   358899999999999999999999997544322211111110    000     


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT-MKKVLQ  791 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~  791 (813)
                         .  .........+.+++.+||+.||.+||+ +++|++
T Consensus       237 ---~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 ---V--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             ---C--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ---c--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence               0  011123577899999999999999998 777765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=340.66  Aligned_cols=250  Identities=26%  Similarity=0.334  Sum_probs=189.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.++||+|+||.||+|...   ..++.||||+++...  ..+.+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQK---GTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEeeCCCEEEEEEEEC---CCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4667789999999999999874   356789999997542  34678899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.   ++.+||+|||+++......
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  205 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV  205 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence            999999999998888899999999999999999999964   9999999999999975   8899999999998765332


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   .....||+.|+|||++.+..++.++||||||+++|||++|+.||......... +     ......... ...   
T Consensus       206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~-----~~i~~~~~~-~~~---  272 (349)
T 2w4o_A          206 L---MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM-F-----RRILNCEYY-FIS---  272 (349)
T ss_dssp             ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH-H-----HHHHTTCCC-CCT---
T ss_pred             c---cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH-H-----HHHHhCCCc-cCC---
Confidence            1   23456899999999999989999999999999999999999999755433211 0     111111100 000   


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        .........+.+++.+||+.||++|||+.|++++
T Consensus       273 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          273 --PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             --TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0111345678899999999999999999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.1e-37  Score=334.51  Aligned_cols=262  Identities=26%  Similarity=0.390  Sum_probs=190.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.++||+|+||.||+|...   .++..||||+++.... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   81 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNK---TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV   81 (317)
T ss_dssp             --------------CEEEEEECS---SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEEC---CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence            34677789999999999999763   4678999999875432 2346788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          598 YEFLNNGTLASFLFGN------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      |||++ ++|.+++...      ..+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A           82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA  157 (317)
T ss_dssp             EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence            99998 5999988643      3578999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EK  747 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~  747 (813)
                      .......  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....   .......   ..
T Consensus       158 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~  232 (317)
T 2pmi_A          158 FGIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL---IFDIMGTPNESL  232 (317)
T ss_dssp             TTSCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCSCCTTT
T ss_pred             cCCCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCChhH
Confidence            6533221  2345689999999999764 689999999999999999999999986544322111   1111100   00


Q ss_pred             cccc---------c----ccc----ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDL---------V----EGD----MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~---------~----~~~----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....         +    ...    +...........+.+++.+||+.||.+|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            0000         0    000    0000111234678999999999999999999999875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5e-38  Score=338.56  Aligned_cols=263  Identities=25%  Similarity=0.389  Sum_probs=199.6

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCc-
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN-  593 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-  593 (813)
                      ....+.+.+.||+|+||.||+|........+..||||+++...  ....+++.+|+.++++++||||+++++++.+... 
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            3445677889999999999999987666677899999986532  2234568899999999999999999999977553 


Q ss_pred             ----eEEEEeecCCCchhhhhh------ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          594 ----RLLVYEFLNNGTLASFLF------GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       594 ----~~lV~e~~~~gsL~~~l~------~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                          .++|+||+++++|.+++.      ....+++..++.++.||++||.|||+   .+|+||||||+|||++.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEE
Confidence                499999999999999984      33568999999999999999999995   59999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.........   ....  
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~--  263 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY---DYLL--  263 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HHHH--
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH---HHHH--
Confidence            99999987654432222334457889999999999999999999999999999999 88888754432211   1110  


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        .....         ......+..+.+++.+||+.||.+|||+.+++++|+.+.+
T Consensus       264 --~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          264 --HGHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             --TTCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --cCCCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence              11000         0112345678999999999999999999999999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.5e-37  Score=351.80  Aligned_cols=249  Identities=23%  Similarity=0.252  Sum_probs=196.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.++||+|+||.||+|...   .++..||||+++..   .......+.+|+.++++++||||+++++++.+.+..++
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEK---ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             HcEEeEEEeeCcCEEEEEEEEc---CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            4677899999999999999874   46789999999753   22334567889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||++  .+|+||||||+||||+.++.+||+|||+++......
T Consensus       226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            999999999999998888899999999999999999999951  489999999999999999999999999998644332


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....||+.|+|||++.+..++.++||||||+++|||++|+.||..........   .+    .....        
T Consensus       304 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i----~~~~~--------  366 (446)
T 4ejn_A          304 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LI----LMEEI--------  366 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HH----HHCCC--------
T ss_pred             cc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH---HH----HhCCC--------
Confidence            21  345679999999999999999999999999999999999999997554322111   10    00100        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .  ........+.+++.+||+.||.+||     +++|++++
T Consensus       367 ~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          367 R--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             C--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            0  0112346788999999999999999     99999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.8e-38  Score=340.74  Aligned_cols=263  Identities=25%  Similarity=0.383  Sum_probs=210.0

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCC-
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ-  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-  592 (813)
                      ...+.+.+.||+|+||.||+|....  ....++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+ 
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            3456778999999999999998753  234678999999975432 2345688999999999 7999999999987755 


Q ss_pred             ceEEEEeecCCCchhhhhhccCC----------------CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLK----------------PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~----------------l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      ..++||||+++++|.+++.....                +++..++.++.||++||.|||+.   +|+||||||+||+++
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~  182 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS  182 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence            48999999999999999976543                78999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAIL  735 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l  735 (813)
                      .++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........  
T Consensus       183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~--  260 (316)
T 2xir_A          183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--  260 (316)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH--
T ss_pred             CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH--
Confidence            999999999999987655433332344567899999999999899999999999999999998 99999754432211  


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .    ..........         ........+.+++.+||+.||.+|||+.||+++|+.+++
T Consensus       261 ~----~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          261 C----RRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             H----HHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H----HHhccCccCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            0    1111110000         111234678899999999999999999999999988764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.5e-37  Score=326.86  Aligned_cols=252  Identities=21%  Similarity=0.306  Sum_probs=206.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...|.+.+.||+|+||.||+|...   ..+..+|+|++........+.+.+|++++++++||||+++++++.+....++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQK---GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV   84 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeC---CCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence            345778899999999999999874   35678999999876556667899999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCcccccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~~~~~  674 (813)
                      |||+++++|.+++.....+++..++.++.|++.||.|||+.   +|+|+||||+||++   +.++.+||+|||++.....
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            99999999999998888899999999999999999999964   99999999999999   7889999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ...   .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||......+...       ........ ... 
T Consensus       162 ~~~---~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-------~~~~~~~~-~~~-  228 (277)
T 3f3z_A          162 GKM---MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML-------KIREGTFT-FPE-  228 (277)
T ss_dssp             TSC---BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------HHHHCCCC-CCH-
T ss_pred             ccc---hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH-------HHHhCCCC-CCc-
Confidence            332   2345689999999998764 8999999999999999999999997644322110       00111000 000 


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .......+.+.+++.+||+.||.+|||+.|++++
T Consensus       229 ----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          229 ----KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             ----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ----hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                0001235678899999999999999999999863

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.6e-38  Score=339.00  Aligned_cols=251  Identities=23%  Similarity=0.285  Sum_probs=181.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      ++||+|+||.||++...   .+++.||||++...   ....+.+|+.++.+++ ||||+++++++.++...++||||+++
T Consensus        17 ~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~   90 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHK---KSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG   90 (325)
T ss_dssp             CCSEEETTEEEEEEEET---TTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             CccccCCCeEEEEEEEC---CCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence            67999999999999874   35789999998643   3456788999999997 99999999999999999999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC---CEEEeeccCccccccCcccce
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY---NARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~---~~kl~DfGla~~~~~~~~~~~  680 (813)
                      |+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++   .+||+|||+++........  
T Consensus        91 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--  165 (325)
T 3kn6_A           91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--  165 (325)
T ss_dssp             CBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc--
Confidence            99999999888899999999999999999999964   999999999999998665   8999999999876543222  


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....................+...      .....
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~  239 (325)
T 3kn6_A          166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------FEGEA  239 (325)
T ss_dssp             ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC------CCSHH
T ss_pred             ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC------CCccc
Confidence            234568999999999999999999999999999999999999997543311100001111111111110      00000


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....++.+.+++.+||+.||.+|||+.|++++
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            11245778999999999999999999999865

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5.7e-38  Score=344.99  Aligned_cols=252  Identities=23%  Similarity=0.273  Sum_probs=194.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|.+.++||+|+||+||++...   ..++.||||+++... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDK---LTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEET---TTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEEC---CCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            4778899999999999999874   467799999997542 334678899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC--EEEeeccCccccccCcc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN--ARISDFGLAKLLTLNQS  677 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~--~kl~DfGla~~~~~~~~  677 (813)
                      |+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.  +||+|||+++.......
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence            999999999998888899999999999999999999964   9999999999999987765  99999999975432221


Q ss_pred             cceeecccccccccCcccccCCCCCCc-cchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k-~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                         .....||+.|+|||++.+..++.+ +||||||+++|||++|+.||.........  ........         ....
T Consensus       174 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~---------~~~~  239 (361)
T 3uc3_A          174 ---PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRIL---------SVKY  239 (361)
T ss_dssp             ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHH---------TTCC
T ss_pred             ---CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHh---------cCCC
Confidence               234569999999999988887665 89999999999999999999754332111  01111111         1111


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...........+.+|+.+||+.||.+|||+.|++++
T Consensus       240 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            111111235678899999999999999999999976

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-38  Score=342.34  Aligned_cols=261  Identities=24%  Similarity=0.427  Sum_probs=201.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccC-CcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.+.||+|+||.||+|...... ..+..||||.++.... ....++.+|+.++++++|+||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            34556789999999999999876432 2356799999875422 234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++++|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            99999999999999764 6789999999999999999999965   9999999999999999999999999999876543


Q ss_pred             cccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          676 QSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.   .    .......      
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~----~~~~~~~------  267 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---M----KAINDGF------  267 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H----HHHHTTC------
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH---H----HHHHCCC------
Confidence            2211 1223346788999999999899999999999999999999 9999975432211   1    1111110      


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         ........+..+.+++.+||+.||.+||++.+|+++|+.++.
T Consensus       268 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          268 ---RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             ---CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ---cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence               001112345778999999999999999999999999987653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=7e-38  Score=339.65  Aligned_cols=261  Identities=24%  Similarity=0.377  Sum_probs=200.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCc-ceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTS-TTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~-~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.++||+|+||.||+|....+... ...|++|.+... .....+++.+|+.++++++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            3467788999999999999987543221 234688887543 2334567899999999999999999999998754 889


Q ss_pred             EEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||+++|+|.+++.. ...+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            9999999999999976 45789999999999999999999965   9999999999999999999999999999887554


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..........+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+....       ....        
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-------~~~~--------  235 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-------LEKG--------  235 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-------HHTT--------
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-------HHcC--------
Confidence            43332344557889999999999999999999999999999999 9999976543321111       1110        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                       ............+.+++.+||+.||.+||++.|+++.|+.+...
T Consensus       236 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          236 -ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             -CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence             01111122356788999999999999999999999999987643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.5e-37  Score=329.05  Aligned_cols=259  Identities=22%  Similarity=0.308  Sum_probs=196.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+.++||+|+||+||+|...    .+..||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             chhhhhcccCCCEEEEEEEcC----CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            567789999999999999862    56789999986432  223456889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++ +|.+++... ..+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (288)
T 1ob3_A           80 EHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (288)
T ss_dssp             ECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             EecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence            99985 888888754 6789999999999999999999964   999999999999999999999999999987643222


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cccccc--
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDDL--  751 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~--  751 (813)
                      .  .....+|+.|+|||++.+. .++.++||||||+++|||++|+.||......+...   ........   ......  
T Consensus       156 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          156 K--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM---RIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCCTTTSTTGGG
T ss_pred             c--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHHCCCChhhchhhhc
Confidence            1  2345689999999999764 58999999999999999999999997654322111   11111110   000000  


Q ss_pred             ---cccccc-------ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 ---VEGDME-------ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ---~~~~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         .++...       ........+.+.+++.+||+.||++|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence               000000       00011235678899999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=342.52  Aligned_cols=247  Identities=25%  Similarity=0.325  Sum_probs=196.7

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCC
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      .+.||+|+||.||+|...   .++..||||+++.......+++.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~---~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  170 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEET---ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG  170 (373)
T ss_dssp             EEECC-----CEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceEEecCcCEEEEEEEEc---CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            467999999999999874   35788999999865445567899999999999999999999999999999999999999


Q ss_pred             Cchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE--cCCCCEEEeeccCccccccCcccce
Q 045343          604 GTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL--DDYYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       604 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll--~~~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      ++|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||+  +.++.+||+|||+++.......   
T Consensus       171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---  244 (373)
T 2x4f_A          171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---  244 (373)
T ss_dssp             CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---
Confidence            9999988654 5689999999999999999999964   99999999999999  5678999999999987754432   


Q ss_pred             eecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..  ... ...    .. ....     ..
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~i-~~~----~~-~~~~-----~~  311 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL--NNI-LAC----RW-DLED-----EE  311 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--HHH-HHT----CC-CSCS-----GG
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHH-Hhc----cC-CCCh-----hh
Confidence            23346999999999999889999999999999999999999999765432211  111 100    00 0000     00


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....+.+.+++.+||+.||.+|||+.|++++
T Consensus       312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          312 FQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            11235778999999999999999999999973

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.8e-37  Score=338.60  Aligned_cols=255  Identities=24%  Similarity=0.312  Sum_probs=202.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeecc-ccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~  595 (813)
                      .+++.+.||+|+||.||++...   .+++.||||+++....   ...+.+.+|..++.++ +||||+++++++.+.+..+
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             heEEEEEEEecCCeEEEEEEEC---CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            4667889999999999999874   4678999999975432   2234578899999887 8999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++++||+|||+++.....
T Consensus        87 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~  163 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  163 (345)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence            9999999999999998888899999999999999999999964   9999999999999999999999999999864332


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh--hhHHHHHHhhccCccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA--ILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........  .............       
T Consensus       164 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-------  234 (345)
T 3a8x_A          164 GDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------  234 (345)
T ss_dssp             TCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-------
T ss_pred             CCc--ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-------
Confidence            211  34567999999999999999999999999999999999999999753221100  0001111111111       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM------KKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~  792 (813)
                       ....  +......+.+++.+||+.||.+||++      .|++++
T Consensus       235 -~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          235 -QIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             -CCCC--CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             -CCCC--CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence             1111  11235678899999999999999995      677654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.1e-38  Score=342.48  Aligned_cols=248  Identities=27%  Similarity=0.333  Sum_probs=203.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  594 (813)
                      ..+.+.+.||+|+||.||+|...   .+++.||||+++...   ....+.+..|..++.++ +||||+++++++.+.+..
T Consensus        17 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           17 EDFILHKMLGKGSFGKVFLAEFK---KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            44667889999999999999874   467899999997532   23345677888888877 899999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++++||+|||+++....
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence            99999999999999998888899999999999999999999964   999999999999999999999999999986543


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..   ..+    ....      .
T Consensus       171 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~---~~i----~~~~------~  235 (345)
T 1xjd_A          171 GDAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF---HSI----RMDN------P  235 (345)
T ss_dssp             TTCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH----HHCC------C
T ss_pred             CCCc--ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH---HHH----HhCC------C
Confidence            2221  34567999999999999999999999999999999999999999754432211   111    1010      0


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMK-KVLQ  791 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~  791 (813)
                      ..    .......+.+++.+||+.||.+||++. ||++
T Consensus       236 ~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          236 FY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             CC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            00    112346788999999999999999997 7764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=7.5e-38  Score=333.27  Aligned_cols=267  Identities=27%  Similarity=0.419  Sum_probs=196.9

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEe
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFC  588 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~  588 (813)
                      +...|+....+.+.++||+|+||+||+|...      ..+|||+++...  ....+.+.+|+.++++++|+||+++++++
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS   89 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESS------SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEc------CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence            3344566667888899999999999999752      249999986432  22345689999999999999999999975


Q ss_pred             ecCCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                       .....++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        90 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg  165 (289)
T 3og7_A           90 -TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG  165 (289)
T ss_dssp             -CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             -cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccce
Confidence             45678999999999999999964 45789999999999999999999964   99999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      +++...............||+.|+|||.+.   +..++.++||||||+++|||++|+.||........  +.....    
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~----  239 (289)
T 3og7_A          166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVG----  239 (289)
T ss_dssp             ------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHH----
T ss_pred             eccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhc----
Confidence            998765432222234456999999999986   55678899999999999999999999975443221  111111    


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .......    .. .....+++.+.+++.+||+.||.+|||+.|+++.|+.+.+
T Consensus       240 ~~~~~~~----~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          240 RGSLSPD----LS-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HTSCCCC----TT-SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ccccCcc----hh-hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            1111110    00 0112345789999999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.4e-37  Score=340.09  Aligned_cols=249  Identities=24%  Similarity=0.289  Sum_probs=203.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeecc-ccCCcceEEeEeecCCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  594 (813)
                      ..+++.+.||+|+||.||+|...   .+++.||||+++...   ....+.+..|..++..+ +||||+++++++.+.+..
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERK---GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET---TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            44677899999999999999874   457899999997532   23345678899999887 899999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++++||+|||+++....
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            99999999999999998888899999999999999999999964   999999999999999999999999999986433


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..   ..+   . ..        
T Consensus       174 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~~i---~-~~--------  236 (353)
T 2i0e_A          174 DGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF---QSI---M-EH--------  236 (353)
T ss_dssp             TTCC--BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH---H-HC--------
T ss_pred             CCcc--cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH---HHH---H-hC--------
Confidence            2221  34567999999999999999999999999999999999999999754432211   111   1 11        


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      ....  .......+.+++.+||+.||.+||+     ++||+++
T Consensus       237 ~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          237 NVAY--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             CCCC--CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            1110  1123567889999999999999995     5777765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=8.1e-38  Score=334.38  Aligned_cols=260  Identities=26%  Similarity=0.491  Sum_probs=201.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEee-cCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCD-EGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~~lV~  598 (813)
                      +.+.+.||+|+||.||+|....+......+|||.++.... ...+++.+|+.++++++||||+++++++. .+...++||
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  106 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  106 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence            5667899999999999999865555566799999875332 23456889999999999999999999864 455789999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++... ..+++..++.++.|+++||.|||+.   +|+||||||+||+++.++.+||+|||+++.......
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY  183 (298)
T ss_dssp             ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred             eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence            999999999999764 5678999999999999999999964   999999999999999999999999999987654332


Q ss_pred             c--ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          678 K--AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       678 ~--~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .  .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+|+......+..   ....   . ..  ..   
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~---~~~~---~-~~--~~---  251 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT---VYLL---Q-GR--RL---  251 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH---HHHH---T-TC--CC---
T ss_pred             hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH---HHHh---c-CC--CC---
Confidence            1  11234557889999999999999999999999999999999 55555433322111   0000   0 00  00   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                          ......+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus       252 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          252 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                01112346789999999999999999999999999987754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.8e-38  Score=343.04  Aligned_cols=274  Identities=25%  Similarity=0.358  Sum_probs=208.6

Q ss_pred             hcccccceeeeeeEEEEEEec-cCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecC--CceEEE
Q 045343          522 NFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--QNRLLV  597 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--~~~~lV  597 (813)
                      .+.++||+|+||+||++.... ...+++.||||+++.... ...+.+.+|++++++++|+||+++++++.+.  ...++|
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            778999999999999986542 334678999999975432 2345689999999999999999999999774  567999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++... .+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       114 ~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             ECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence            9999999999999765 489999999999999999999965   999999999999999999999999999988764432


Q ss_pred             c-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 K-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      . .......++..|+|||.+.+..++.++||||||+++|||++|+.||.......... ..+.........+.+.+....
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL-IGIAQGQMTVLRLTELLERGE  268 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-HCSCCHHHHHHHHHHHHHTTC
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh-hcccccchhHHHHHHHHhccc
Confidence            1 11234557888999999998889999999999999999999999986432211000 000000000001111111111


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ........+..+.+++.+||+.||.+|||+.|+++.|+.+.+.-
T Consensus       269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            12222345678999999999999999999999999999876543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-37  Score=336.15  Aligned_cols=243  Identities=22%  Similarity=0.313  Sum_probs=203.3

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--------ccchhhhheeeeeeccccCCcceEEeEee
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--------DGEKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      ...|.+.+.||+|+||.||+|...   .++..||||+++....        ...+.+.+|+.++++++|+||+++++++.
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~   99 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDK---EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE   99 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEET---TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ccceEEEeEEEecCCEEEEEEEEC---CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            345777889999999999999874   4678999999975421        13346788999999999999999999999


Q ss_pred             cCCceEEEEeecCCC-chhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          590 EGQNRLLVYEFLNNG-TLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       590 ~~~~~~lV~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      +.+..++||||+.+| +|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A          100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence            999999999999877 9999999888899999999999999999999964   999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ++.......   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......                 
T Consensus       177 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------  236 (335)
T 3dls_A          177 AAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------  236 (335)
T ss_dssp             CEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------
T ss_pred             ceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------
Confidence            987654432   234569999999999988776 78999999999999999999999642110                 


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......      .....+.+.+++.+||+.||.+|||+.|++++
T Consensus       237 ~~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 VEAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TTTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HhhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000000      11134678899999999999999999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=8.7e-38  Score=330.81  Aligned_cols=255  Identities=32%  Similarity=0.464  Sum_probs=206.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+.+.+.||+|+||.||+|...    ++..||||+++... ...+.+.+|++++++++|+||+++++++. .+..++||
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HhhhheeeecCCCCeEEEEEEEc----CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence            45677899999999999999864    45689999987542 34567899999999999999999999986 45689999


Q ss_pred             eecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++++|.+++....  .+++..++.++.|+++||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence            9999999999997653  689999999999999999999964   99999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ... .....++..|+|||.+.+..++.++||||||++++||++ |+.||......+..   .    ......        
T Consensus       164 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~----~~~~~~--------  227 (279)
T 1qpc_A          164 YTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI---Q----NLERGY--------  227 (279)
T ss_dssp             EEC-CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH---H----HHHTTC--------
T ss_pred             ccc-ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH---H----HHhccc--------
Confidence            211 233456789999999988889999999999999999999 89998754332211   1    111110        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                       ........++.+.+++.+||+.||++|||+.++++.|+.+...
T Consensus       228 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          228 -RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence             0011123357889999999999999999999999999886543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.4e-37  Score=333.30  Aligned_cols=274  Identities=22%  Similarity=0.314  Sum_probs=201.8

Q ss_pred             HHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeee--eeccccCCcceEEeEeec
Q 045343          513 YKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVV--IGQTHHKNLVRLLGFCDE  590 (813)
Q Consensus       513 ~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~  590 (813)
                      ..+.....+.+.++||+|+||.||+|..     .+..||||++....   ...+..|.++  ...++|+||+++++++..
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~  102 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKW-----RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIK  102 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEE-----CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence            3445556788899999999999999987     47889999986432   2233344444  444599999999999987


Q ss_pred             C----CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCcEEEcCCCCE
Q 045343          591 G----QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-----SAQIIHCDIKPQNILLDDYYNA  661 (813)
Q Consensus       591 ~----~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~ivH~dlk~~NIll~~~~~~  661 (813)
                      .    ...++||||+++|+|.+++... .+++..++.++.|++.||+|||+..     ..+|+||||||+|||++.++.+
T Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  181 (337)
T 3mdy_A          103 GTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC  181 (337)
T ss_dssp             SCGGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred             CCCCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence            7    6789999999999999999654 6899999999999999999999431     2299999999999999999999


Q ss_pred             EEeeccCccccccCcccc--eeecccccccccCcccccCCCCCCc------cchhhHHHHHHHHHhC----------CcC
Q 045343          662 RISDFGLAKLLTLNQSKA--IRTAIRGTKGYVAPEWFRNSTITAK------VDVYSFGVLLLEIISC----------RKS  723 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~k------~DVwS~Gvvl~elltG----------~~p  723 (813)
                      ||+|||+++.........  ......||+.|+|||++.+.....+      +||||||+++|||++|          ..|
T Consensus       182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p  261 (337)
T 3mdy_A          182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP  261 (337)
T ss_dssp             EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred             EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence            999999998765433221  1124569999999999988766665      9999999999999999          555


Q ss_pred             CCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       724 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      |......... . ..................   .....++.+.+.+++.+||+.||.+|||+.||+++|+.+.+..
T Consensus       262 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          262 YHDLVPSDPS-Y-EDMREIVCIKKLRPSFPN---RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             TTTTSCSSCC-H-HHHHHHHTTSCCCCCCCG---GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HhhhcCCCCc-h-hhhHHHHhhhccCccccc---cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            5432211100 0 000111111111111110   1112367888999999999999999999999999999887654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.6e-37  Score=342.14  Aligned_cols=273  Identities=15%  Similarity=0.175  Sum_probs=204.8

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccccc-----------chhhhheeeeeeccccCCcce
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQDG-----------EKEFKNEVVVIGQTHHKNLVR  583 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~  583 (813)
                      ....|.+.++||+|+||.||+|.+..+.  ..++.||||++.......           ...+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            3346778899999999999999886432  135789999986532111           112334455667788999999


Q ss_pred             EEeEeecC----CceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--
Q 045343          584 LLGFCDEG----QNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--  656 (813)
Q Consensus       584 l~g~~~~~----~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--  656 (813)
                      +++++...    ...+|||||+ +++|.+++... ..+++..++.++.||+.||+|||+.   +|+||||||+|||++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence            99998765    3489999999 99999999765 6789999999999999999999964   999999999999999  


Q ss_pred             CCCCEEEeeccCccccccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      .++.+||+|||+++.+.......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence            88999999999998765432211     1133459999999999999999999999999999999999999998543321


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ...  ....... ...+..+++..+.   ....+..+.+++..||+.||.+||++.+|++.|+.+++.
T Consensus       269 ~~~--~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          269 KYV--RDSKIRY-RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             HHH--HHHHHHH-HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHH--HHHHHHh-hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            111  0011110 1112222222111   112357889999999999999999999999999876643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=9.1e-38  Score=328.21  Aligned_cols=254  Identities=27%  Similarity=0.439  Sum_probs=207.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+.+.||+|+||.||++...    ++..||||+++... ...+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~----~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             heeeeeEecCCCceeEEEEEec----CCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            4667789999999999999874    45689999997643 234678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++++|.+++... ..+++..++.++.|+++||.|||+.   +|+|+||||+||+++.++.+||+|||++.........
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence            99999999999765 5689999999999999999999964   9999999999999999999999999999876433211


Q ss_pred             ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                      . .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..   .    ...... . .      
T Consensus       161 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~----~i~~~~-~-~------  224 (267)
T 3t9t_A          161 S-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---E----DISTGF-R-L------  224 (267)
T ss_dssp             S-TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---H----HHHTTC-C-C------
T ss_pred             c-cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH---H----HHhcCC-c-C------
Confidence            1 223457788999999998889999999999999999999 89998754332211   1    111110 0 0      


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                       .........+.+++.+||+.||.+||++.|++++|+++.+
T Consensus       225 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          225 -YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence             0111235678899999999999999999999999998754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.7e-37  Score=339.34  Aligned_cols=245  Identities=24%  Similarity=0.218  Sum_probs=204.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+||.||++...   .++..||||+++...   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEEC---CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            4677889999999999999874   367899999986532   2334568889999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       119 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence            999999999999998888899999999999999999999964   9999999999999999999999999999876532 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..       .....+..        
T Consensus       195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-------~~i~~~~~--------  255 (350)
T 1rdq_E          195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY-------EKIVSGKV--------  255 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCCC--------
T ss_pred             ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH-------HHHHcCCC--------
Confidence                23456899999999999999999999999999999999999999755432111       11111111        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      ..  .......+.+++.+||+.||.+||+     ++||+++
T Consensus       256 ~~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          256 RF--PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CC--CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CC--CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            00  1123567889999999999999998     8888864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.3e-38  Score=342.45  Aligned_cols=251  Identities=21%  Similarity=0.300  Sum_probs=194.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeecccc--CCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~  595 (813)
                      .|.+.+.||+|+||.||++...    ++..||||++....  ....+.+.+|+.++.+++|  +||+++++++.++...+
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEECT----TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEEEecCCCeEEEEEEeC----CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            3667899999999999999763    57789999986432  2233578899999999976  99999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||| +.+++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++ ++.+||+|||+++.....
T Consensus        86 lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             EEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            9999 57889999999888899999999999999999999965   999999999999997 578999999999887654


Q ss_pred             cccceeecccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRN-----------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ..........||+.|+|||++.+           ..++.++||||||+++|||++|+.||......... +    ...  
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~----~~~--  233 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-L----HAI--  233 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-H----HHH--
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH-H----HHH--
Confidence            43333345679999999999864           66888999999999999999999999753321110 0    111  


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                             +++.............+.+++.+||+.||.+|||+.|++++-
T Consensus       234 -------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          234 -------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             -------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             -------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence                   111111111112245788999999999999999999999763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=3.7e-38  Score=364.34  Aligned_cols=260  Identities=28%  Similarity=0.423  Sum_probs=210.1

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      +....+.+.++||+|+||.||+|...    ....||||+++... ...++|.+|+++|++++|+||+++++++.+ +..+
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~  337 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  337 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET----TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cchhhhhhheecccCCCeEEEEEEEC----CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence            34455677889999999999999874    34679999997543 335679999999999999999999999876 6789


Q ss_pred             EEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          596 LVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||||+++|+|.+++...  ..+++..++.++.||++||+|||+.   +|+||||||+||||+.++.+||+|||+++...
T Consensus       338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE  414 (535)
T ss_dssp             EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred             EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence            999999999999999753  5689999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... .....++..|+|||++.+..++.++||||||++||||++ |+.||......+..   .    .+..+      
T Consensus       415 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~---~----~i~~~------  480 (535)
T 2h8h_A          415 DNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL---D----QVERG------  480 (535)
T ss_dssp             CHHHHT-TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH---H----HHHTT------
T ss_pred             CCceec-ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---H----HHHcC------
Confidence            332111 223456789999999998899999999999999999999 99999754332211   1    11111      


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                         ........+.+.+.+|+.+||+.||++|||+.+|+++|+.+.....
T Consensus       481 ---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          481 ---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred             ---CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence               0011122346788999999999999999999999999999876543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.3e-38  Score=343.08  Aligned_cols=265  Identities=26%  Similarity=0.400  Sum_probs=210.6

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeec
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE  590 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~  590 (813)
                      ++....+.+.+.||+|+||.||+|......  .....||||.++.... ...+.+.+|+.+++++ +||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            334455677889999999999999875432  1235799999875432 2345688999999999 89999999999999


Q ss_pred             CCceEEEEeecCCCchhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          591 GQNRLLVYEFLNNGTLASFLFGN--------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       591 ~~~~~lV~e~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      .+..++||||+++|+|.+++...              ..+++..++.++.||+.||.|||+.   +|+||||||+|||++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence            99999999999999999998643              3578999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAIL  735 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l  735 (813)
                      .++.+||+|||+++...............+|..|+|||.+.+..++.++||||||+++|||++ |..||.........  
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--  276 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF--  276 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH--
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH--
Confidence            999999999999987655443332334557889999999998899999999999999999999 99998754332211  


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ........             ........++.+.+++.+||+.||.+|||+.||+++|+.+.
T Consensus       277 ~~~~~~~~-------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          277 YKLVKDGY-------------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHTC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCC-------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            11111100             00011123567889999999999999999999999998754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=6.1e-38  Score=338.34  Aligned_cols=260  Identities=23%  Similarity=0.305  Sum_probs=197.3

Q ss_pred             hhcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |.+. +.||+|+||.||+|...   .+++.||||+++.......+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus        14 y~i~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCINL---ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEECS---SSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEecCceecCCceEEEEEEEEc---CCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            4553 67999999999999863   36789999999766555566789999999885 7999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~DfGla~~~~~~  675 (813)
                      ||+++++|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++.   +||+|||++......
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            9999999999998888899999999999999999999965   9999999999999998766   999999999866432


Q ss_pred             ccc-----ceeecccccccccCcccccC-----CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh--------hhHH
Q 045343          676 QSK-----AIRTAIRGTKGYVAPEWFRN-----STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA--------ILTD  737 (813)
Q Consensus       676 ~~~-----~~~~~~~gt~~y~aPE~l~~-----~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~--------~l~~  737 (813)
                      ...     .......||+.|+|||++..     ..++.++||||||+++|||++|+.||.........        ....
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  247 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN  247 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence            211     11223458999999999875     45789999999999999999999999764321100        0000


Q ss_pred             HHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ............ ...     .........+.+++.+||+.||.+|||+.|++++
T Consensus       248 ~~~~~i~~~~~~-~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          248 MLFESIQEGKYE-FPD-----KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHCCCC-CCH-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhccCcc-cCc-----hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            001111111000 000     0001235678999999999999999999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=331.45  Aligned_cols=264  Identities=25%  Similarity=0.316  Sum_probs=200.2

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-----ccchhhhheeeeeeccc---cCCcceEEeE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-----DGEKEFKNEVVVIGQTH---HKNLVRLLGF  587 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~g~  587 (813)
                      +....|++.++||+|+||+||+|...   .+++.||||+++....     .....+.+|+.++++++   ||||++++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDP---HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECT---TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            44556788899999999999999863   4678999999874321     12345777888887775   9999999999


Q ss_pred             eecCC-----ceEEEEeecCCCchhhhhhccCC--CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          588 CDEGQ-----NRLLVYEFLNNGTLASFLFGNLK--PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       588 ~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      +....     ..++||||+. ++|.+++.....  +++..++.++.||+.||+|||+.   +|+||||||+|||++.++.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~  158 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT  158 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred             eeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence            97655     4789999997 599999977643  89999999999999999999965   8999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  740 (813)
                      +||+|||+++.......   .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+...   ...
T Consensus       159 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~i~  232 (308)
T 3g33_A          159 VKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG---KIF  232 (308)
T ss_dssp             EEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH---HHH
T ss_pred             EEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHH
Confidence            99999999987653322   344678999999999999999999999999999999999999997654432211   111


Q ss_pred             Hhhc---cCcccccc---ccccc-------ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          741 DCYR---NEKLDDLV---EGDME-------ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       741 ~~~~---~~~~~~~~---~~~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....   ........   .....       .....+..+.+.+++.+||+.||.+|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            1111   11000000   00000       00011345778999999999999999999999875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1e-37  Score=366.83  Aligned_cols=252  Identities=28%  Similarity=0.394  Sum_probs=201.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      ++||+|+||.||+|.+... ..+..||||+++....  ...+++.+|+++|++++|+|||++++++.. +..++||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECS-SCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCC-CcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            4799999999999976533 3568899999976432  234679999999999999999999999964 56899999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc-cee
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK-AIR  681 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~  681 (813)
                      +|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++.+...... ...
T Consensus       453 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          453 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            999999998888899999999999999999999964   9999999999999999999999999999877544321 112


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....+|..|+|||++.+..++.++|||||||++|||++ |+.||......+..       ..+..+..         ...
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-------~~i~~~~~---------~~~  593 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-------AMLEKGER---------MGC  593 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-------HHHHTTCC---------CCC
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcCCC---------CCC
Confidence            33457789999999999999999999999999999998 99999765432211       11111111         111


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ...++..+.+++..||+.||++||++.+|++.|+.+.
T Consensus       594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            2234678999999999999999999999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.2e-37  Score=334.81  Aligned_cols=262  Identities=27%  Similarity=0.454  Sum_probs=209.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ...+.+.+.||+|+||.||+|....  ....+..||||.+..... ....++.+|+.++++++|+||+++++++.+.+..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            3456778999999999999998752  123567899999875322 2334688999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEe
Q 045343          595 LLVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~  664 (813)
                      ++||||+++|+|.+++...          ..+++..+++++.||+.||.|||+.   +|+||||||+||+++.++.+||+
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~  180 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG  180 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence            9999999999999998642          3568999999999999999999964   99999999999999999999999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhh
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      |||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........       ...
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-------~~~  253 (322)
T 1p4o_A          181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL-------RFV  253 (322)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH-------HHH
T ss_pred             cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH-------HHH
Confidence            9999987654432222233457889999999998899999999999999999999 88988754322111       111


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .......         .....+..+.+++.+||+.||.+|||+.|++++|+++.+
T Consensus       254 ~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          254 MEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            1111110         112345678899999999999999999999999988654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-37  Score=339.78  Aligned_cols=257  Identities=22%  Similarity=0.271  Sum_probs=206.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeecc-ccCCcceEEeEeecCCc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  593 (813)
                      ..|.+.+.||+|+||.||++....+...++.||||+++...    ....+.+.+|++++.++ +|+||+++++++.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            35777899999999999999886555578899999986532    22345678899999999 69999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            999999999999999998888899999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHHHHHHhhccCcccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~  750 (813)
                      ...... .....||+.|+|||++.+  ..++.++||||||+++|||++|+.||........ ..+..   .....     
T Consensus       211 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~-----  281 (355)
T 1vzo_A          211 ADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR---RILKS-----  281 (355)
T ss_dssp             GGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH---HHHHC-----
T ss_pred             cCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH---HHhcc-----
Confidence            433222 334579999999999985  3478899999999999999999999975432211 11111   11100     


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQML  793 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L  793 (813)
                        .+    .........+.+++.+||+.||.+||     +++|++++.
T Consensus       282 --~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          282 --EP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             --CC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             --CC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence              00    01123356788999999999999999     999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.8e-37  Score=326.21  Aligned_cols=254  Identities=28%  Similarity=0.409  Sum_probs=206.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||+|...   .+++.||||+++.... ...+.+.+|+.++++++|+||+++++++.+++..++|
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEEC---CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            45778899999999999999874   3567899999865332 3346788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      +||+++++|.+++.....+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++........
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence            99999999999998888899999999999999999999964   999999999999999999999999999987654332


Q ss_pred             cceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ........|+..|+|||.+.+..+ +.++||||||+++|||++|+.||......... ...+.     ....  ...   
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~-----~~~~--~~~---  229 (276)
T 2yex_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWK-----EKKT--YLN---  229 (276)
T ss_dssp             ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-HHHHH-----TTCT--TST---
T ss_pred             hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHhh-----hccc--ccC---
Confidence            222344678999999999987665 77899999999999999999999765432111 11110     0000  000   


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ........+.+++.+||+.||.+|||+.|++++
T Consensus       230 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          230 ---PWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             ---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence               011235678899999999999999999999875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6e-37  Score=331.48  Aligned_cols=253  Identities=26%  Similarity=0.333  Sum_probs=206.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ...|.+.+.||+|+||.||++...   .++..||||.++.....      ..+++.+|+.++++++||||+++++++.+.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREK---STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR   87 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hccEEEeeEeeecCCEEEEEEEEC---CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            456888999999999999999874   35788999998754322      245688999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----CEEEeecc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----NARISDFG  667 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----~~kl~DfG  667 (813)
                      ...++||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            99999999999999999998888899999999999999999999964   999999999999999887    79999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      +++.......   .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+...      .. ....
T Consensus       165 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~i-~~~~  234 (321)
T 2a2a_A          165 LAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------NI-TSVS  234 (321)
T ss_dssp             TCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------HH-HTTC
T ss_pred             cceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH------HH-Hhcc
Confidence            9987654322   234568999999999999999999999999999999999999997544322110      00 0000


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      . . .++.    .....++.+.+++.+||+.||.+|||+.|++++
T Consensus       235 ~-~-~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 Y-D-FDEE----FFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             C-C-CCHH----HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             c-c-cChh----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0 0 0000    001234678899999999999999999999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.2e-37  Score=339.64  Aligned_cols=244  Identities=26%  Similarity=0.288  Sum_probs=192.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeee-eeccccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVV-IGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+++.+.||+|+||.||++...   .++..||||+++....   ...+.+..|..+ ++.++||||+++++++.+.+..+
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHK---AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEET---TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEc---CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            4678899999999999999874   4678899999975432   223456667766 57789999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+++.....
T Consensus       116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            9999999999999998888899999999999999999999964   9999999999999999999999999999864332


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .   .... .        .
T Consensus       193 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~---~i~~-~--------~  255 (373)
T 2r5t_A          193 NST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY---D---NILN-K--------P  255 (373)
T ss_dssp             CCC--CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH---H---HHHH-S--------C
T ss_pred             CCc--cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH---H---HHHh-c--------c
Confidence            221  34567999999999999999999999999999999999999999754432211   1   1111 1        1


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK  788 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e  788 (813)
                      ...  .......+.+++.+||+.||.+||++.+
T Consensus       256 ~~~--~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          256 LQL--KPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CCC--CSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             cCC--CCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            110  1123467889999999999999999853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=332.92  Aligned_cols=265  Identities=23%  Similarity=0.309  Sum_probs=199.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.++||+|+||+||+|...   .+++.||||++......  ..+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNR---DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEeeEEeecCCeEEEEEEeC---CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            3567789999999999999874   35789999988653222  235678899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.|+++||.|||+.   +|+||||||+||+++.++.+||+|||++........
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  157 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD  157 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence            99999999999998888899999999999999999999964   999999999999999999999999999987653322


Q ss_pred             cceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH--------HhhccCc-
Q 045343          678 KAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF--------DCYRNEK-  747 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~~~~~~-  747 (813)
                      .  .....||..|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........        ..+.... 
T Consensus       158 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (311)
T 4agu_A          158 Y--YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY  235 (311)
T ss_dssp             ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred             c--cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence            1  234568999999999876 568999999999999999999999997655433221111100        0000000 


Q ss_pred             cc--cccccccc---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LD--DLVEGDME---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~--~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  .+.++...   .......+..+.+++.+||+.||.+|||++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00  00000000   00011345678899999999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.8e-37  Score=330.71  Aligned_cols=257  Identities=28%  Similarity=0.386  Sum_probs=205.1

Q ss_pred             Hhhccc-ccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKE-EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~-~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+ .||+|+||.||+|.... ...+..||||+++....  ...+++.+|+.++++++||||+++++++ +.+..++
T Consensus        17 ~y~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           17 LLTLEDKELGSGNFGTVKKGYYQM-KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEEC-SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhccCccccccCeeeEeeeecC-CCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            455666 89999999999997643 33578899999875422  2245789999999999999999999999 5677899


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++.......
T Consensus        95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence            999999999999998888899999999999999999999964   99999999999999999999999999998775443


Q ss_pred             ccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          677 SKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       677 ~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..       .........     
T Consensus       172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-------~~~~~~~~~-----  239 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-------AMLEKGERM-----  239 (291)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-------HHHHTTCCC-----
T ss_pred             CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-------HHHHcCCCC-----
Confidence            221 1122346789999999988888999999999999999999 99999754432211       111111100     


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                          ......+..+.+++.+||+.||.+||++.+|++.|+.+.
T Consensus       240 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          240 ----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                111234578899999999999999999999999998765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.2e-38  Score=340.60  Aligned_cols=277  Identities=23%  Similarity=0.374  Sum_probs=209.5

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec-cCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC--ce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT-TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--NR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~-~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~  594 (813)
                      ...+.+.+.||+|+||.||++.... ....+..||||++........+++.+|+.++++++|+||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            3446778999999999999998532 23467899999997655555667999999999999999999999986654  78


Q ss_pred             EEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      ++|+||+++++|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP  196 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence            9999999999999999765 4689999999999999999999964   99999999999999999999999999998876


Q ss_pred             cCcccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++|..|+.....+.................+.+.+
T Consensus       197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (326)
T 2w1i_A          197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  276 (326)
T ss_dssp             SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence            443221 1223457788999999998888999999999999999999999876331110000000000000000000111


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ............+..+.+++.+||+.||.+|||+.||++.|+.+.
T Consensus       277 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          277 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111111112234678999999999999999999999999998764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.2e-37  Score=345.87  Aligned_cols=249  Identities=20%  Similarity=0.293  Sum_probs=194.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccc--cCCcceEEeEeecCCceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTH--HKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~l  596 (813)
                      |.+.+.||+|+||.||++...    .+..||||++....  ....+++.+|+.++.+++  |+||+++++++..++..++
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             eEEEEEEccCCCeEEEEEEcC----CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            677889999999999999763    47789999986432  223467899999999996  5999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||| +.+++|.+++.....+++..+..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++.+....
T Consensus       134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            999 6788999999888889999999999999999999995   5999999999999995 5799999999998876544


Q ss_pred             ccceeecccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRN-----------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      .........||+.|+|||++.+           ..++.++|||||||++|||++|+.||........ .+    ....  
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-~~----~~~~--  281 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KL----HAII--  281 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HH----HHHH--
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-HH----HHHh--
Confidence            3322345679999999999865           3688899999999999999999999975432111 11    1111  


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                             ++.............+.+++.+||+.||.+|||+.||+++
T Consensus       282 -------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          282 -------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             -------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence                   1111111111124678899999999999999999999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=3.1e-37  Score=343.08  Aligned_cols=272  Identities=15%  Similarity=0.175  Sum_probs=203.6

Q ss_pred             HHhhccccccee--eeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          519 ATDNFKEEVGRG--SFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G--~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ..|++.++||+|  +||.||+|...   .+++.||||+++...  ....+.+.+|+.++++++|||||++++++.+++..
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  101 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYK---PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL  101 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEc---CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence            357788999999  99999999874   367899999997543  22335678899999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++||||+++|+|.+++...  ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||.+...
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999999765  6789999999999999999999964   9999999999999999999999999998765


Q ss_pred             ccCccc-----ceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh--hHHHHHHhh
Q 045343          673 TLNQSK-----AIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI--LTDWAFDCY  743 (813)
Q Consensus       673 ~~~~~~-----~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~--l~~~~~~~~  743 (813)
                      ......     .......||..|+|||++.+  ..++.++|||||||++|||++|+.||..........  +........
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            322111     11122468999999999987  578999999999999999999999997543322110  000000000


Q ss_pred             -----ccCc-------------ccccccc---------cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--Hh
Q 045343          744 -----RNEK-------------LDDLVEG---------DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LE  794 (813)
Q Consensus       744 -----~~~~-------------~~~~~~~---------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~  794 (813)
                           ..+.             .......         .............+.+|+.+||+.||.+|||+.|++++  ++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence                 0000             0000000         00000112235678999999999999999999999976  44


Q ss_pred             cC
Q 045343          795 GV  796 (813)
Q Consensus       795 ~~  796 (813)
                      ++
T Consensus       339 ~~  340 (389)
T 3gni_B          339 QI  340 (389)
T ss_dssp             GC
T ss_pred             HH
Confidence            44

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.3e-37  Score=335.76  Aligned_cols=250  Identities=22%  Similarity=0.327  Sum_probs=194.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCc----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN----  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  593 (813)
                      ..+++.+.||+|+||.||+|...   .+++.||||+++... ....+.+.+|+.++++++||||+++++++.+...    
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK---VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET---TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEc---CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence            45677899999999999999874   367899999997533 2334678999999999999999999999865432    


Q ss_pred             -----------------------------------------------------eEEEEeecCCCchhhhhhccC---CCC
Q 045343          594 -----------------------------------------------------RLLVYEFLNNGTLASFLFGNL---KPS  617 (813)
Q Consensus       594 -----------------------------------------------------~~lV~e~~~~gsL~~~l~~~~---~l~  617 (813)
                                                                           .++||||+++++|.+++....   ...
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence                                                                 799999999999999998653   345


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc----------ceeeccccc
Q 045343          618 WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK----------AIRTAIRGT  687 (813)
Q Consensus       618 ~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~gt  687 (813)
                      +..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........          .......||
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            667899999999999999964   9999999999999999999999999999887654221          112345699


Q ss_pred             ccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHH
Q 045343          688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEK  767 (813)
Q Consensus       688 ~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  767 (813)
                      +.|+|||++.+..++.++||||||+++|||++|..|+...     ...    ..........         .........
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~----~~~~~~~~~~---------~~~~~~~~~  301 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRI----ITDVRNLKFP---------LLFTQKYPQ  301 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHH----HHHHHTTCCC---------HHHHHHCHH
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHH----HHHhhccCCC---------cccccCChh
Confidence            9999999999999999999999999999999987654211     000    0000111000         011234466


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          768 LVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       768 l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +.+++.+||+.||.+|||+.|++++
T Consensus       302 ~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          302 EHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHccCCCCcCCCHHHHhhc
Confidence            7899999999999999999999874

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=342.54  Aligned_cols=253  Identities=20%  Similarity=0.202  Sum_probs=200.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+||.||++...   .+++.||||++++..   ....+.+.+|..++.+++|+||+++++++.+.+..++
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~---~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  138 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMK---QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL  138 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             hEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            3456688999999999999874   467899999997531   2234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++|+|.+++... ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++++||+|||+++.....
T Consensus       139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD  215 (412)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence            99999999999999764 4789999999999999999999964   9999999999999999999999999999876544


Q ss_pred             cccceeecccccccccCccccc-------CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFR-------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~-------~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      .... ....+||+.|+|||++.       ...++.++|||||||++|||++|+.||......+...   .+.....    
T Consensus       216 ~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~---~i~~~~~----  287 (412)
T 2vd5_A          216 GTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG---KIVHYKE----  287 (412)
T ss_dssp             SCEE-CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHTHHH----
T ss_pred             Cccc-cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH---HHHhccc----
Confidence            3211 23457999999999997       3568999999999999999999999997654322111   0000000    


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR---PTMKKVLQM  792 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~evl~~  792 (813)
                       .+..+..    ....+..+.+++.+||+ +|.+|   |+++||+++
T Consensus       288 -~~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          288 -HLSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             -HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             -CcCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence             0000000    11235678999999999 99998   699999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.6e-37  Score=333.55  Aligned_cols=259  Identities=24%  Similarity=0.293  Sum_probs=202.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee----cCCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD----EGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----~~~~~  594 (813)
                      ..|.+.+.||+|+||.||++...   .+++.||||++........+.+.+|+.++++++||||+++++++.    .....
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGL---HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEET---TTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEec---CCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            34677899999999999999874   367899999987655555677899999999999999999999986    34478


Q ss_pred             EEEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          595 LLVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ++|+||+++++|.+++..    ...+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~  182 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN  182 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence            999999999999999875    46789999999999999999999965   99999999999999999999999999987


Q ss_pred             ccccCcccc-------eeecccccccccCcccccCCC---CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH
Q 045343          671 LLTLNQSKA-------IRTAIRGTKGYVAPEWFRNST---ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       671 ~~~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~---~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~  740 (813)
                      .........       ......||+.|+|||++....   ++.++||||||+++|||++|+.||......... +.... 
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~-  260 (317)
T 2buj_A          183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALAV-  260 (317)
T ss_dssp             ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HHHHH-
T ss_pred             hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hhHHh-
Confidence            654221110       012245799999999987654   688999999999999999999999632111100 00000 


Q ss_pred             HhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                         ..         .............+.+++.+||+.||.+|||+.||+++|+.+.
T Consensus       261 ---~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          261 ---QN---------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             ---HC---------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             ---hc---------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence               00         0111111234567899999999999999999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=4.1e-37  Score=335.33  Aligned_cols=253  Identities=24%  Similarity=0.333  Sum_probs=201.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...|++.+.||+|+||.||++...   .+++.||||.++...    ....+|++++.++ +||||+++++++.+++..++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l   93 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHK---ATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV   93 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence            355788899999999999999874   467899999997532    3456788888887 79999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC----CCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY----YNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~----~~~kl~DfGla~~~  672 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||+.+.    +.+||+|||+++..
T Consensus        94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            999999999999998888899999999999999999999964   99999999999998543    35999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....||+.|+|||++.+..++.++||||||+++|||++|+.||..........+...    ...+...   
T Consensus       171 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~----i~~~~~~---  241 (342)
T 2qr7_A          171 RAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR----IGSGKFS---  241 (342)
T ss_dssp             BCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHH----HHHCCCC---
T ss_pred             cCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHH----HccCCcc---
Confidence            543322  3345789999999999888889999999999999999999999975432221111111    1111111   


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         .........++.+.+++.+||+.||.+||++.|++++
T Consensus       242 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          242 ---LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             ---CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ---cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence               0000111345778899999999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.6e-37  Score=329.30  Aligned_cols=261  Identities=20%  Similarity=0.232  Sum_probs=200.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc---chhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG---EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..|.+.+.||+|+||.||+|...   .+++.||||++.......   .+.+.+|+.++++++||||+++++++..++..+
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDT---VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEET---TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEc---CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            34677899999999999999874   357889999987543222   356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +|+||+++++|.+++.....+++..++.++.||++||.|||+.   +|+|+||||+|||++.++.+||+|||++......
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9999999999999998888899999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.......   +.    ...... ...   . 
T Consensus       188 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~----~~~~~~-~~~---~-  254 (309)
T 2h34_A          188 KLTQ-LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---MG----AHINQA-IPR---P-  254 (309)
T ss_dssp             ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---HH----HHHHSC-CCC---G-
T ss_pred             cccc-ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---HH----HHhccC-CCC---c-
Confidence            2221 234568999999999999899999999999999999999999997543221   10    111110 000   0 


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcCcCCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGVVEVS  800 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~~~~  800 (813)
                        .......+..+.+++.+||+.||.+|| +++++++.|+..+...
T Consensus       255 --~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          255 --STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             --GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             --cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence              001123356788999999999999999 9999999999876543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-36  Score=345.24  Aligned_cols=247  Identities=24%  Similarity=0.352  Sum_probs=204.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||+++...   ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHE---LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEET---TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4677899999999999999874   367899999997532   1234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        94 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           94 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence            99999999999999988889999999999999999999995   599999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.........   .    ....+.        
T Consensus       171 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~---~----~i~~~~--------  232 (476)
T 2y94_A          171 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF---K----KICDGI--------  232 (476)
T ss_dssp             C---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHH---H----HHHTTC--------
T ss_pred             c---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHH---H----HHhcCC--------
Confidence            2   334579999999999988765 68999999999999999999999754432111   1    111111        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...  .......+.+++.+||+.||.+|||+.|++++
T Consensus       233 ~~~--p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          233 FYT--PQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             CCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             cCC--CccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            000  11234678899999999999999999999974

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.9e-37  Score=360.91  Aligned_cols=251  Identities=28%  Similarity=0.409  Sum_probs=200.3

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      +||+|+||.||+|..... ..+..||||+++.... ...+++.+|+++|++++|+|||++++++.. +..++||||+++|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g  420 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG  420 (613)
T ss_dssp             EEEECSSSEEEEEEEECS-SCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred             EEecCCCcEEEEEEEecC-CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence            799999999999987543 2567899999976432 345679999999999999999999999976 5699999999999


Q ss_pred             chhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc-eee
Q 045343          605 TLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRT  682 (813)
Q Consensus       605 sL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~~  682 (813)
                      +|.+++... ..+++..++.++.||++||+|||+.   +|+||||||+||||+.++.+||+|||+++.+....... ...
T Consensus       421 ~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~  497 (613)
T 2ozo_A          421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  497 (613)
T ss_dssp             BHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred             cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence            999999754 5689999999999999999999964   99999999999999999999999999998775433221 112


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccccccccc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALND  761 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  761 (813)
                      ...++..|+|||++.+..++.++|||||||+||||++ |+.||......+..       ..+..+.         .....
T Consensus       498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-------~~i~~~~---------~~~~p  561 (613)
T 2ozo_A          498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-------AFIEQGK---------RMECP  561 (613)
T ss_dssp             ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH-------HHHHTTC---------CCCCC
T ss_pred             CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-------HHHHcCC---------CCCCC
Confidence            2345689999999999999999999999999999998 99999765443211       1111111         01112


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          762 IKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       762 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ..++..+.+++..||+.||.+||++.+|++.|+.+.
T Consensus       562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            235678999999999999999999999999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.8e-37  Score=325.22  Aligned_cols=247  Identities=26%  Similarity=0.358  Sum_probs=201.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||+|...   .++..||||++....   ....+.+.+|+.++++++||||+++++++.+....++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cEEEeeEEecCCCeEEEEEEEc---cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4667789999999999999874   456789999986432   2234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~  163 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  163 (279)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence            99999999999999888889999999999999999999995   599999999999999999999999999986554322


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+....   ...    ...        
T Consensus       164 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~----~~~--------  224 (279)
T 3fdn_A          164 ----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR---ISR----VEF--------  224 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH---HHH----TCC--------
T ss_pred             ----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH---HHh----CCC--------
Confidence                2345689999999999999999999999999999999999999975443221110   000    000        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                        .......+.+.+++.+||+.||.+|||+.||+++-
T Consensus       225 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~  259 (279)
T 3fdn_A          225 --TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP  259 (279)
T ss_dssp             --CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred             --CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence              00112346788999999999999999999999764

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=3.6e-37  Score=334.39  Aligned_cols=264  Identities=20%  Similarity=0.279  Sum_probs=194.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.++||+|+||+||+|...   .+++.||||+++....  ...+.+.+|+.++++++|+||+++++++.+++..++|
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDT---VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET---TTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hEEEEEEEEecCCeEEEEEEEC---CCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            4677899999999999999864   4678999999864322  2245678999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-----CCCCEEEeeccCcccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-----DYYNARISDFGLAKLL  672 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-----~~~~~kl~DfGla~~~  672 (813)
                      |||++ |+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++     .++.+||+|||+++..
T Consensus       112 ~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             EECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             EecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            99998 59999998888899999999999999999999964   999999999999994     4556999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc---
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL---  748 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---  748 (813)
                      ......  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.................   
T Consensus       188 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (329)
T 3gbz_A          188 GIPIRQ--FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV  265 (329)
T ss_dssp             C-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred             CCcccc--cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhh
Confidence            533221  2345689999999999875 4899999999999999999999999765432211110000000000000   


Q ss_pred             ----------cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 ----------DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ----------~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                .......+.........+.+.+|+.+||+.||.+|||+.|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence                      00000001100111234678899999999999999999999874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.1e-36  Score=323.15  Aligned_cols=251  Identities=23%  Similarity=0.315  Sum_probs=203.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.++||+|+||.||+|...   .++..||||++.....  ...+.+.+|+.++++++|+||+++++++.+....++|
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHK---TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhcCcCCeEEEEEEEc---CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            4667889999999999999874   3577899999865322  2335688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEeeccCcccccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTL  674 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~DfGla~~~~~  674 (813)
                      |||+++++|.+++.....+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.   +||+|||++.....
T Consensus        84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            99999999999998888899999999999999999999964   9999999999999986655   99999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ...   .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..........       ........ ... 
T Consensus       161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-------~~~~~~~~-~~~-  228 (284)
T 3kk8_A          161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA-------QIKAGAYD-YPS-  228 (284)
T ss_dssp             SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------HHHHTCCC-CCT-
T ss_pred             Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH-------HHHhcccc-CCc-
Confidence            322   234568999999999999999999999999999999999999997544322111       00111110 000 


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .........+.+++.+||+.||.+|||+.|++++
T Consensus       229 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          229 ----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             ----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                0011235678899999999999999999999974

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.6e-37  Score=334.45  Aligned_cols=271  Identities=25%  Similarity=0.340  Sum_probs=195.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee-----cCCce
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD-----EGQNR  594 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-----~~~~~  594 (813)
                      .+.+.+.||+|+||.||+|..     +++.||||+++..... ......|+..+..++|+||+++++.+.     .....
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~~~~-~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSL-----DERPVAVKVFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEE-----TTEEEEEEEEEGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             HhheeeecccCCCeEEEEEEE-----CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            466778999999999999976     5689999998753211 112234445566689999999998553     23356


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC------SAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~------~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      ++||||+++|+|.+++.... .++..++.++.||++||.|||+..      ..+|+||||||+|||++.++.+||+|||+
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence            89999999999999996554 489999999999999999999431      12999999999999999999999999999


Q ss_pred             ccccccCcc------cceeecccccccccCcccccC-------CCCCCccchhhHHHHHHHHHhCCcCCCcccc-hhhhh
Q 045343          669 AKLLTLNQS------KAIRTAIRGTKGYVAPEWFRN-------STITAKVDVYSFGVLLLEIISCRKSFDIEMG-EEYAI  734 (813)
Q Consensus       669 a~~~~~~~~------~~~~~~~~gt~~y~aPE~l~~-------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~-~~~~~  734 (813)
                      ++.+.....      ........||+.|+|||++.+       ..++.++||||||+++|||++|..|+..... .+...
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~  246 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM  246 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence            987654321      111224569999999999976       3556789999999999999999877643322 11000


Q ss_pred             hH----------HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          735 LT----------DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       735 l~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ..          ...............+...  .......+..+.+++.+||+.||++|||+.||++.|+++++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            00          0000011111111111110  111234677899999999999999999999999999987754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=6.2e-38  Score=340.14  Aligned_cols=265  Identities=28%  Similarity=0.397  Sum_probs=204.3

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ++....+.+.+.||+|+||.||+|....  ....+..||||++... ......++.+|+.++++++||||+++++++.+.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            3444567888999999999999998542  2346678999998643 223445788999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhcc-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCE
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN-------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNA  661 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~  661 (813)
                      ...++||||+++++|.+++...       ..+++..++.++.||++||.|||+.   +|+||||||+|||++.   +..+
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred             CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence            9999999999999999999754       3478999999999999999999964   9999999999999984   4569


Q ss_pred             EEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHH
Q 045343          662 RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~  740 (813)
                      ||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..   ... 
T Consensus       183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~~-  258 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---EFV-  258 (327)
T ss_dssp             EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHH-
T ss_pred             EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH---HHH-
Confidence            9999999986644332222334567899999999988899999999999999999998 99998754332211   111 


Q ss_pred             HhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         ......         .........+.+++.+||+.||.+||++.+|+++|+.+..
T Consensus       259 ---~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          259 ---TSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             ---HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---hcCCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence               111000         0112335678899999999999999999999999987654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=8.1e-37  Score=324.33  Aligned_cols=258  Identities=24%  Similarity=0.324  Sum_probs=208.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+.+.+.||+|+||.||+|...   .++..||||++....   ....+.+.+|++++++++|+||+++++++.+.+..+
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREK---QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY   90 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEc---CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence            34677899999999999999874   357789999986532   223456889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++++|.+++.....+++..++.++.||++||.|||+   .+|+|+||||+||+++.++.+||+|||++......
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            999999999999999888889999999999999999999995   59999999999999999999999999999765432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .    .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+...      .... ..        
T Consensus       168 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~-~~--------  228 (284)
T 2vgo_A          168 R----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVN-VD--------  228 (284)
T ss_dssp             C----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHT-TC--------
T ss_pred             c----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH------HHhc-cc--------
Confidence            2    234568999999999999899999999999999999999999997544322110      0000 00        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--HHhcCcCCCCCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ--MLEGVVEVSLPP  803 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~--~L~~~~~~~~p~  803 (813)
                      ..  ........+.+++.+||+.||.+||++.|+++  .+........||
T Consensus       229 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~  276 (284)
T 2vgo_A          229 LK--FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP  276 (284)
T ss_dssp             CC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCC
T ss_pred             cC--CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCC
Confidence            00  01123467889999999999999999999996  344433333344

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.1e-37  Score=331.95  Aligned_cols=260  Identities=22%  Similarity=0.346  Sum_probs=197.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||+|...   .++..||||+++...   ....+++.+|+.++++++|+||+++++++.+.+..++
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACL---LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEET---TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEc---CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            4778899999999999999874   357899999987422   2234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ||||+++++|.+++..    ...+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++...
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            9999999999999864    45689999999999999999999964   9999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ......  .....|+..|+|||.+.+..++.++||||||+++|||++|+.||...........     ........... 
T Consensus       187 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~-  258 (310)
T 2wqm_A          187 SSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-----KKIEQCDYPPL-  258 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH-----HHHHTTCSCCC-
T ss_pred             cCCCcc--ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH-----HHhhcccCCCC-
Confidence            543221  2345689999999999998999999999999999999999999975432211111     11111111111 


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                             ......+.+.+++.+||+.||.+|||+.+|+++|+++....
T Consensus       259 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          259 -------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             -------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence                   11123567889999999999999999999999999886553

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.3e-36  Score=324.47  Aligned_cols=263  Identities=18%  Similarity=0.209  Sum_probs=204.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEe-ecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFC-DEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lV~  598 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++...  ...+++.+|+.++++++|++++..+.++ .+....++||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEEESC--SSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             EEEEEEEEccCCCeEEEEEEEc---CCCcEEEEEEecCC--cchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            3567789999999999999863   36789999998653  2345789999999999998877666665 5566789999


Q ss_pred             eecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~~~~~  674 (813)
                      ||+ +++|.+++. ....+++..++.++.||+.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  160 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence            999 999999997 346789999999999999999999965   99999999999999   4888999999999987664


Q ss_pred             Ccccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          675 NQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       675 ~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      .....     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........................
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (296)
T 3uzp_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE  240 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred             cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH
Confidence            43211     1234569999999999999999999999999999999999999997643221111111111000000000


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      .         .....++.+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus       241 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          241 V---------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             H---------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             H---------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            0         01123567899999999999999999999999999876543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.7e-37  Score=333.95  Aligned_cols=256  Identities=26%  Similarity=0.298  Sum_probs=198.2

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-----ccccchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-----FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      ...|++.+.||+|+||.||+|...   .++..||||++...     .....+.+.+|+.++++++||||+++++++.+.+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIEN---QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhheeecceeeecCCeEEEEEEEC---CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            355778899999999999999874   46788999998653     2234467899999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhc----------------------------------------cCCCCHHHHHHHHHHHHHHH
Q 045343          593 NRLLVYEFLNNGTLASFLFG----------------------------------------NLKPSWNLRTNIAFQIARGL  632 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~----------------------------------------~~~l~~~~~~~i~~~ia~gl  632 (813)
                      ..++||||+++|+|.+++..                                        ...+++..++.++.||++||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            99999999999999999852                                        11235677888999999999


Q ss_pred             HHhhhcCCCCeeeCCCCCCcEEEcCCC--CEEEeeccCccccccCccc--ceeecccccccccCcccccC--CCCCCccc
Q 045343          633 LYLHEDCSAQIIHCDIKPQNILLDDYY--NARISDFGLAKLLTLNQSK--AIRTAIRGTKGYVAPEWFRN--STITAKVD  706 (813)
Q Consensus       633 ~yLH~~~~~~ivH~dlk~~NIll~~~~--~~kl~DfGla~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~--~~~~~k~D  706 (813)
                      +|||+.   +|+||||||+|||++.++  .+||+|||+++.+......  .......||+.|+|||.+.+  ..++.++|
T Consensus       182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D  258 (345)
T 3hko_A          182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD  258 (345)
T ss_dssp             HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred             HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence            999964   999999999999998766  8999999999876432221  11234569999999999975  67889999


Q ss_pred             hhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCH
Q 045343          707 VYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM  786 (813)
Q Consensus       707 VwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~  786 (813)
                      |||||+++|||++|+.||......+...      ...... . ..     ...........+.+++.+||+.||.+||++
T Consensus       259 iwslG~il~el~~g~~pf~~~~~~~~~~------~~~~~~-~-~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  325 (345)
T 3hko_A          259 AWSAGVLLHLLLMGAVPFPGVNDADTIS------QVLNKK-L-CF-----ENPNYNVLSPLARDLLSNLLNRNVDERFDA  325 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHHCC-C-CT-----TSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCChHHHHH------HHHhcc-c-cc-----CCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence            9999999999999999997554322111      111110 0 00     001111235678899999999999999999


Q ss_pred             HHHHHH
Q 045343          787 KKVLQM  792 (813)
Q Consensus       787 ~evl~~  792 (813)
                      .|++++
T Consensus       326 ~~~l~h  331 (345)
T 3hko_A          326 MRALQH  331 (345)
T ss_dssp             HHHHHS
T ss_pred             HHHhcC
Confidence            999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.5e-37  Score=340.03  Aligned_cols=265  Identities=23%  Similarity=0.275  Sum_probs=201.3

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-----cCCcceEEeEee
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-----HKNLVRLLGFCD  589 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~g~~~  589 (813)
                      ++....|.+.++||+|+||+||+|...   .+++.||||+++.. ....+.+..|+.++++++     |+||+++++++.
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~  106 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHI---DNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM  106 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEEC---CCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence            344556778899999999999999874   35788999998742 223445677888888886     999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC----------
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----------  657 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~----------  657 (813)
                      ..+..++||||+ +++|.+++....  .+++..++.++.||+.||+|||+.   +|+||||||+|||++.          
T Consensus       107 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~  182 (360)
T 3llt_A          107 YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITV  182 (360)
T ss_dssp             ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred             ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccch
Confidence            999999999999 999999997653  589999999999999999999954   9999999999999975          


Q ss_pred             ---------------CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCc
Q 045343          658 ---------------YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK  722 (813)
Q Consensus       658 ---------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~  722 (813)
                                     ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  257 (360)
T 3llt_A          183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL  257 (360)
T ss_dssp             ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             hcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCC
Confidence                           789999999999865432     234568999999999999999999999999999999999999


Q ss_pred             CCCcccchhhhhhHHHHHHhhc--------cCcccccccc-ccc-----cc---------------ccHHHHHHHHHHHH
Q 045343          723 SFDIEMGEEYAILTDWAFDCYR--------NEKLDDLVEG-DME-----AL---------------NDIKCVEKLVMVSI  773 (813)
Q Consensus       723 p~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~-~~~-----~~---------------~~~~~~~~l~~l~~  773 (813)
                      ||......+.............        ........+. ...     ..               ......+.+.+|+.
T Consensus       258 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  337 (360)
T 3llt_A          258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY  337 (360)
T ss_dssp             SCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence            9976543322111110000000        0000000000 000     00               00011266789999


Q ss_pred             HhcccCCCCCCCHHHHHHH
Q 045343          774 WCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       774 ~Cl~~dP~~RPt~~evl~~  792 (813)
                      +||+.||.+|||+.|++++
T Consensus       338 ~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          338 SILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHCCSSGGGSCCHHHHTTS
T ss_pred             HHhcCChhhCCCHHHHhcC
Confidence            9999999999999999864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=9.7e-37  Score=325.39  Aligned_cols=262  Identities=18%  Similarity=0.207  Sum_probs=203.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEe-ecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFC-DEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~-~~~~~~~lV  597 (813)
                      ..|.+.+.||+|+||.||+|...   ..++.||||++...  ....++.+|+.++++++|++++..+..+ .+.+..++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEc---CCCceEEEEeeccc--ccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            45778899999999999999864   36789999987543  2345788999999999988877777666 566678999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCccccc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLT  673 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~~~~  673 (813)
                      |||+ +++|.+++.. ...+++..++.++.||+.||.|||+.   +|+||||||+|||+   +.++.+||+|||+++...
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9999 9999999974 46789999999999999999999965   99999999999999   788999999999998775


Q ss_pred             cCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          674 LNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       674 ~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      ......     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence            443211     123457999999999999999999999999999999999999999764332211111111000000000


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ..         .....++.+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       240 ~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          240 EV---------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             HH---------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hh---------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            00         001235688999999999999999999999999988664

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.5e-37  Score=336.23  Aligned_cols=266  Identities=17%  Similarity=0.167  Sum_probs=205.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCC-----cceEEEEEEeeccccccchhhhheeeeeeccccCCcce----------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRT-----STTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVR----------  583 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~----------  583 (813)
                      ..|.+.+.||+|+||.||+|....+..     .+..||||.+...     +.+.+|++++++++|+||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            356778999999999999998864211     4678999998642     47889999999999999987          


Q ss_pred             -----EEeEeec-CCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE
Q 045343          584 -----LLGFCDE-GQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL  655 (813)
Q Consensus       584 -----l~g~~~~-~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll  655 (813)
                           +++++.. +...++||||+ +++|.+++...  ..+++..++.++.||+.||.|||+.   +|+||||||+|||+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~  192 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV  192 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence                 5677765 67889999999 99999999875  7899999999999999999999965   99999999999999


Q ss_pred             cCCC--CEEEeeccCccccccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCccc
Q 045343          656 DDYY--NARISDFGLAKLLTLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEM  728 (813)
Q Consensus       656 ~~~~--~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~  728 (813)
                      +.++  .+||+|||+++.+.......     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            9998  99999999998765432211     1233579999999999999999999999999999999999999998654


Q ss_pred             chhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          729 GEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       729 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ..... +....... . .....+.+....   ....++.+.+++.+||+.||.+|||+++|++.|+++.+-
T Consensus       273 ~~~~~-~~~~~~~~-~-~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          273 PNTED-IMKQKQKF-V-DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             TCHHH-HHHHHHHH-H-HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCHHH-HHHHHHhc-c-CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            22111 11111110 0 011111111100   012357789999999999999999999999999887643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.6e-37  Score=340.58  Aligned_cols=271  Identities=20%  Similarity=0.247  Sum_probs=209.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCC--ceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ--NRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~~l  596 (813)
                      .|.+.+.||+|+||+||+|...   .+++.||||+++.... ...+.+.+|++++++++|+||+++++++.+..  ..++
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHK---KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             ceEEEEEEEcCCCeEEEEEEEC---CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            4667889999999999999874   3578999999975432 33456789999999999999999999997655  6799


Q ss_pred             EEeecCCCchhhhhhccCC---CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE----cCCCCEEEeeccCc
Q 045343          597 VYEFLNNGTLASFLFGNLK---PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARISDFGLA  669 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~---l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll----~~~~~~kl~DfGla  669 (813)
                      ||||+++|+|.+++.....   +++..++.++.||+.||+|||+.   +|+||||||+|||+    +.++.+||+|||++
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            9999999999999976533   89999999999999999999964   99999999999999    77888999999999


Q ss_pred             cccccCcccceeecccccccccCcccccC--------CCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hhhhHHHHH
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRN--------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF  740 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~~l~~~~~  740 (813)
                      +.......   .....||+.|+|||++.+        ..++.++||||||+++|||++|+.||....... .........
T Consensus       164 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~  240 (396)
T 4eut_A          164 RELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII  240 (396)
T ss_dssp             EECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred             eEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence            87654332   234569999999999865        456789999999999999999999997543211 111111111


Q ss_pred             HhhccCccccc---ccc------c--ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          741 DCYRNEKLDDL---VEG------D--MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       741 ~~~~~~~~~~~---~~~------~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ..........+   ...      .  ............+.+++.+||+.||++||+++|+++.++.+++.
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            11111111100   000      0  11112346778889999999999999999999999999887654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.5e-37  Score=341.85  Aligned_cols=265  Identities=20%  Similarity=0.312  Sum_probs=204.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.++||+|+||.||++...   .++..||+|+++... ....+.+.+|+.++++++|+||+++++++.+++..++|
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceeeeeecCCCCeEEEEEEEC---CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            34667789999999999999874   357889999987542 22345789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.|++.||.|||+.  .+|+||||||+|||++.++.+||+|||++....... 
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  186 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-  186 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-
Confidence            99999999999998888899999999999999999999952  279999999999999999999999999997654322 


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH------------------
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA------------------  739 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~------------------  739 (813)
                         .....||+.|+|||++.+..++.++||||||+++|||++|+.||...............                  
T Consensus       187 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (360)
T 3eqc_A          187 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  263 (360)
T ss_dssp             -------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred             ---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence               23456899999999999999999999999999999999999999765432211100000                  


Q ss_pred             -----HHhhccCcc----cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          740 -----FDCYRNEKL----DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       740 -----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .........    ..+................+.+++.+||+.||.+|||+.|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                 000000000    00000101111112235678999999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1e-36  Score=323.20  Aligned_cols=253  Identities=26%  Similarity=0.342  Sum_probs=202.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      ...|.+.+.||+|+||.||++...   .+++.||||.++.....      ..+++.+|+.++++++||||+++++++.+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   80 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQK---GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK   80 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhHHhhcccCceEEEEEEEc---CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC
Confidence            456788899999999999999874   35778999998753221      245689999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----CEEEeecc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----NARISDFG  667 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----~~kl~DfG  667 (813)
                      ...++||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+|+||||+||+++.++    .+||+|||
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           81 TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             CeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            99999999999999999998888899999999999999999999964   999999999999998877    89999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      ++........   .....|++.|+|||++.+..++.++||||||+++|||++|+.||......+...       ......
T Consensus       158 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~~  227 (283)
T 3bhy_A          158 IAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT-------NISAVN  227 (283)
T ss_dssp             TCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------HHHTTC
T ss_pred             cceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHH-------HhHhcc
Confidence            9987654322   234568999999999999899999999999999999999999997654322110       000000


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  ...    .......+.+.+++.+||+.||.+||++.|++++
T Consensus       228 ~~--~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          228 YD--FDE----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             CC--CCH----HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             cC--Ccc----hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            00  000    0011234678899999999999999999999973

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.9e-37  Score=333.08  Aligned_cols=259  Identities=29%  Similarity=0.451  Sum_probs=203.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+.+.+.||+|+||.||+|....+. ....++||.++... ....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETT-EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCC-cccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            35678899999999999999875321 22246999887532 33456789999999999 89999999999999999999


Q ss_pred             EEeecCCCchhhhhhccC----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC
Q 045343          597 VYEFLNNGTLASFLFGNL----------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN  660 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~  660 (813)
                      ||||+++++|.+++....                .+++..++.++.||++||.|||+.   +|+||||||+|||++.++.
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~  180 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV  180 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence            999999999999997653                689999999999999999999964   9999999999999999999


Q ss_pred             EEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHH
Q 045343          661 ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA  739 (813)
Q Consensus       661 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~  739 (813)
                      +||+|||+++.......   .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.       
T Consensus       181 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-------  250 (327)
T 1fvr_A          181 AKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------  250 (327)
T ss_dssp             EEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-------
T ss_pred             EEEcccCcCcccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH-------
Confidence            99999999975432211   223457889999999988889999999999999999998 9999975433211       


Q ss_pred             HHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ........         ...........+.+++.+||+.||.+|||+.|++++|+.+.+-.
T Consensus       251 ~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          251 YEKLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHGGGTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHhhcCC---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            11111110         00111233567899999999999999999999999998876543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.3e-36  Score=323.10  Aligned_cols=250  Identities=26%  Similarity=0.365  Sum_probs=196.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.++||+|+||.||++...   .++..+|||++..... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER---SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEc---cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            56788899999999999999874   3577899999876432 2346789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCcc
Q 045343          598 YEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAK  670 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~  670 (813)
                      |||+++++|.+++...    ..+++..++.++.||++||.|||+.   +|+||||||+|||+   +.++.+||+|||+++
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~  175 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE  175 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence            9999999999998543    6789999999999999999999964   99999999999999   456789999999998


Q ss_pred             ccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      .......   .....||+.|+|||.+. ..++.++||||||+++|||++|+.||......+....   ..  ....... 
T Consensus       176 ~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~---~~--~~~~~~~-  245 (285)
T 3is5_A          176 LFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK---AT--YKEPNYA-  245 (285)
T ss_dssp             C-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HH--HCCCCCC-
T ss_pred             ecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh---hc--cCCcccc-
Confidence            7654322   23456899999999886 4688999999999999999999999976543221110   00  0000000 


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ..       .....+.+.+++.+||+.||.+|||+.||+++
T Consensus       246 -~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          246 -VE-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             -C---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             -cc-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00       00124678899999999999999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2e-37  Score=329.89  Aligned_cols=261  Identities=25%  Similarity=0.351  Sum_probs=200.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+++.+.||+|+||.||+|...........||||+++...   ....+++.+|++++++++|+||+++++++.+.. .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            45677899999999999999876554455679999986532   233467889999999999999999999997754 89


Q ss_pred             EEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|+||+++++|.+++... ..+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++.....
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            999999999999999764 5689999999999999999999965   999999999999999999999999999987754


Q ss_pred             Ccccc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          675 NQSKA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       675 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..      ........     
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------~~~~~~~~-----  242 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL------HKIDKEGE-----  242 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------HHHHTSCC-----
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH------HHHHccCC-----
Confidence            43221 1223457889999999988888999999999999999999 99999755432211      11111100     


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                          ........+..+.+++.+||+.||.+|||+.+++++|+++..
T Consensus       243 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          243 ----RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ----CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence                001112345788999999999999999999999999988654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.1e-37  Score=322.78  Aligned_cols=248  Identities=27%  Similarity=0.398  Sum_probs=181.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||.+....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESI---HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEc---cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            3567789999999999999874   367889999986532   1223568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |+||+++++|.+++... ..+++..++.++.|+++||.|||+.   +|+|+||||+||+++.++.+||+|||++......
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP  165 (278)
T ss_dssp             EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence            99999999999999865 6789999999999999999999965   9999999999999999999999999999876533


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........               ..+....
T Consensus       166 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~~~  228 (278)
T 3cok_A          166 HEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVLAD  228 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSC
T ss_pred             CCc--ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhhcc
Confidence            221  22356899999999999888999999999999999999999999754322110               0011111


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  ........+.+++.+||+.||.+|||+.+++++
T Consensus       229 ~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          229 YE--MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             CC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cC--CccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            11  111235678899999999999999999999874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.4e-37  Score=326.15  Aligned_cols=249  Identities=26%  Similarity=0.379  Sum_probs=196.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC-CceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-QNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||++..     .+..||||.++..  ...+.+.+|+.++++++|+||+++++++.+. ...++|
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv   93 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   93 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             hhceEEeEEecCCCceEEEEEE-----cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence            4567789999999999999976     4678999998753  3456789999999999999999999997554 478999


Q ss_pred             EeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          598 YEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||+++++|.+++....  .+++..++.++.|+++||.|||+.   +|+|+||||+||+++.++.+||+|||++......
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  170 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  170 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence            99999999999997653  378999999999999999999964   9999999999999999999999999999865432


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      .     ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..       .......       
T Consensus       171 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~-------~~~~~~~-------  231 (278)
T 1byg_A          171 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-------PRVEKGY-------  231 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-------HHHTTTC-------
T ss_pred             c-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHhcCC-------
Confidence            1     22357889999999998899999999999999999998 99999754332211       0111110       


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                        ........+..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus       232 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          232 --KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence              011112345788999999999999999999999999988653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-37  Score=327.67  Aligned_cols=257  Identities=28%  Similarity=0.390  Sum_probs=205.0

Q ss_pred             hhccc-ccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKE-EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~-~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+ .||+|+||.||+|..... ..+..||||+++... ....+++.+|++++++++||||+++++++ +.+..++||
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   88 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM   88 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             hhhhhccccccCceeEEEeEeccC-CCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence            34445 899999999999986432 256789999997642 23356789999999999999999999999 556799999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+||+++.++.+||+|||+++.......
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            999999999999654 5689999999999999999999964   999999999999999999999999999987754332


Q ss_pred             cc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          678 KA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       678 ~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .. ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+..   .    ........      
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~----~i~~~~~~------  232 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM---A----FIEQGKRM------  232 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH---H----HHHTTCCC------
T ss_pred             eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH---H----HHhcCCcC------
Confidence            21 1223456889999999988889999999999999999999 99999755432211   1    11111100      


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         ......+..+.+++..||+.||.+||++.+++++|+.+..
T Consensus       233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence               1112345788999999999999999999999999988653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.7e-36  Score=330.83  Aligned_cols=274  Identities=21%  Similarity=0.304  Sum_probs=209.2

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeec--cccCCcceEEeEe
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ--THHKNLVRLLGFC  588 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~  588 (813)
                      +...+.....+.+.+.||+|+||.||+|..     .++.||||++...   ..+.+..|.+++..  ++||||+++++++
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~  105 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD  105 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-----TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEE-----cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence            344556667888999999999999999987     4788999998643   34567778888877  7899999999999


Q ss_pred             ecCC----ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeCCCCCCcEEEcCCC
Q 045343          589 DEGQ----NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-----SAQIIHCDIKPQNILLDDYY  659 (813)
Q Consensus       589 ~~~~----~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-----~~~ivH~dlk~~NIll~~~~  659 (813)
                      ....    ..++||||+++|+|.+++... .+++..++.++.||+.||.|||...     ..+|+||||||+|||++.++
T Consensus       106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             ECCCSSCCCEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred             cccCCccceeEEEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence            8776    789999999999999999654 6899999999999999999999321     34999999999999999999


Q ss_pred             CEEEeeccCccccccCcccc--eeecccccccccCcccccCCC------CCCccchhhHHHHHHHHHhC----------C
Q 045343          660 NARISDFGLAKLLTLNQSKA--IRTAIRGTKGYVAPEWFRNST------ITAKVDVYSFGVLLLEIISC----------R  721 (813)
Q Consensus       660 ~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~------~~~k~DVwS~Gvvl~elltG----------~  721 (813)
                      .+||+|||+++.........  ......||+.|+|||++.+..      ++.++||||||+++|||++|          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            99999999998765443211  123456999999999997653      33689999999999999999          6


Q ss_pred             cCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          722 KSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       722 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .||........ ....+ ............+..   .....+..+.+.+++.+||+.||.+|||+.||+++|+.+.+
T Consensus       265 ~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          265 LPYYDLVPSDP-SVEEM-RKVVCEQKLRPNIPN---RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CTTTTTSCSSC-CHHHH-HHHHTTSCCCCCCCG---GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccccCcCcc-cHHHH-HHHHHHHHhCCCCcc---cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            67754322110 00011 111111111111111   01123567889999999999999999999999999998754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.8e-37  Score=336.54  Aligned_cols=247  Identities=25%  Similarity=0.317  Sum_probs=198.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+...+.||+|+||.||+|...   .++..||||++.....   ...+++.+|++++++++||||+++++++.+++..+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  130 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW  130 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEc---cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEE
Confidence            44667789999999999999864   3678999999864322   22356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+. |+|.+++. ....+++..+..++.|+++||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       131 lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          131 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            9999997 67877775 456789999999999999999999965   999999999999999999999999999987643


Q ss_pred             CcccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .      ....||+.|+|||++.   ...++.++||||||+++|||++|+.||.........      ...... .... 
T Consensus       207 ~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~------~~~~~~-~~~~-  272 (348)
T 1u5q_A          207 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQN-ESPA-  272 (348)
T ss_dssp             B------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHS-CCCC-
T ss_pred             C------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhc-CCCC-
Confidence            2      2356899999999984   567899999999999999999999999754322111      111111 0000 


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                             .......+.+.+++.+||+.||.+|||+.+++++.
T Consensus       273 -------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          273 -------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             -------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence                   11112356788999999999999999999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4.1e-37  Score=326.24  Aligned_cols=253  Identities=25%  Similarity=0.338  Sum_probs=205.0

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec----
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----  590 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----  590 (813)
                      +.....+.+.+.||+|+||.||+|...   .+++.||||+++..    .+.+.+|++++++++||||+++++++..    
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHR---IDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYD   79 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEET---TTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC
T ss_pred             chhccccceeeeeccCCceEEEEEEEc---CCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccC
Confidence            445567788899999999999999874   35789999998653    3467899999999999999999998854    


Q ss_pred             ------------CCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          591 ------------GQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       591 ------------~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                                  ....++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.   +|+|+||||+|||++
T Consensus        80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  156 (284)
T 2a19_B           80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV  156 (284)
T ss_dssp             ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence                        34579999999999999999654  5789999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhH
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT  736 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~  736 (813)
                      .++.+||+|||++........   .....|++.|+|||.+.+..++.++||||||+++|||++|..|+....     .  
T Consensus       157 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~--  226 (284)
T 2a19_B          157 DTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----K--  226 (284)
T ss_dssp             ETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----H--
T ss_pred             CCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----H--
Confidence            999999999999987654332   234568999999999999999999999999999999999998864211     0  


Q ss_pred             HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCC
Q 045343          737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSL  801 (813)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~  801 (813)
                        .........+.            ......+.+++.+||+.||.+|||+.|++++|+.+...+.
T Consensus       227 --~~~~~~~~~~~------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          227 --FFTDLRDGIIS------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             --HHHHHHTTCCC------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             --HHHHhhccccc------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence              01111111111            1124567899999999999999999999999988765443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.3e-36  Score=323.78  Aligned_cols=249  Identities=27%  Similarity=0.404  Sum_probs=197.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec----CCce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----GQNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~  594 (813)
                      +.+.++||+|+||.||+|...   ..+..||+|.+....  ....+.+.+|+.++++++||||+++++++..    ....
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~---~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             EEeeeeccCCCCeEEEEeEec---CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            456678999999999999874   467789999987532  2234568899999999999999999998865    3458


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLT  673 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~  673 (813)
                      ++||||+++++|.+++.....+++..++.++.||+.||.|||+. ..+|+|+||||+|||++ .++.+||+|||++....
T Consensus       105 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            99999999999999998888899999999999999999999964 12399999999999998 78999999999997654


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...    .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||.........      ............  
T Consensus       184 ~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~------~~~~~~~~~~~~--  250 (290)
T 1t4h_A          184 ASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI------YRRVTSGVKPAS--  250 (290)
T ss_dssp             TTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH------HHHHTTTCCCGG--
T ss_pred             ccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH------HHHHhccCCccc--
Confidence            332    234568999999998874 5899999999999999999999999754332111      111111111100  


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ........+.+++.+||+.||.+|||+.|++++
T Consensus       251 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 ------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                  111223578899999999999999999999874

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=335.36  Aligned_cols=255  Identities=18%  Similarity=0.188  Sum_probs=202.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccccchhhhheeeeeeccc---cCCcceEEeEeecCC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQ  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~  592 (813)
                      ...+.+.++||+|+||+||+|....  ....++.||||+++..   ...++..|++++.+++   |+||+++++++...+
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            3456677899999999999995322  1246788999998653   3456677777777765   999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC----------
Q 045343          593 NRLLVYEFLNNGTLASFLFG-----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD----------  657 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~----------  657 (813)
                      ..++||||+++|+|.+++..     ...+++..++.++.||++||+|||+   .+|+||||||+||||+.          
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred             CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence            99999999999999999973     4678999999999999999999995   59999999999999998          


Q ss_pred             -CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhH
Q 045343          658 -YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT  736 (813)
Q Consensus       658 -~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~  736 (813)
                       ++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||........    
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----  293 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----  293 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE----
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce----
Confidence             899999999999876533333334556799999999999999999999999999999999999999864322110    


Q ss_pred             HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHhcCcCC
Q 045343          737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR-PTMKKVLQMLEGVVEV  799 (813)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Pt~~evl~~L~~~~~~  799 (813)
                                .+.....    ..   ...+.+.+++..|++.+|.+| |+++++.+.|+++++-
T Consensus       294 ----------~~~~~~~----~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          294 ----------KPEGLFR----RL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             ----------EECSCCT----TC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------eechhcc----cc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                      0111111    00   124567788999999999998 6888888888876543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.4e-36  Score=325.98  Aligned_cols=252  Identities=24%  Similarity=0.322  Sum_probs=203.9

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ...+.+.+.||+|+||.||++...   .+++.||||.++.......+.+.+|+.++++++||||+++++++.+....++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQR---LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV   84 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hccceeeeeccCCCCceEEEEEEC---CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence            456788899999999999999874   36788999999865444556789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCcccccc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~~~~~  674 (813)
                      |||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+||++   +.++.+||+|||+++....
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            99999999999998888899999999999999999999964   99999999999999   7889999999999976543


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..    .....|++.|+|||.+.+..++.++||||||+++|||++|+.||........   ....    ...... .   
T Consensus       162 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i----~~~~~~-~---  226 (304)
T 2jam_A          162 GI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL---FEKI----KEGYYE-F---  226 (304)
T ss_dssp             BT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHH----HHCCCC-C---
T ss_pred             Cc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHH----HcCCCC-C---
Confidence            21    2334689999999999999999999999999999999999999975433211   1111    111000 0   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ........+..+.+++.+||+.||.+|||+.|++++
T Consensus       227 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          227 --ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             --CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             --CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              001111335678999999999999999999999974

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-37  Score=341.42  Aligned_cols=264  Identities=22%  Similarity=0.359  Sum_probs=190.3

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccc-cCCcceEEeEeecCC--
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQ--  592 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~--  592 (813)
                      ...|.+.+.||+|+||.||+|...   .+++.||||++....  ....+.+.+|+.++.++. |+||+++++++...+  
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDR---RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEET---TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             cCceEEEEEeeeCCCeEEEEEEEC---CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            345778899999999999999874   467899999986432  223456788999999997 999999999997544  


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++||||++ ++|.+++.. ..+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.+
T Consensus        85 ~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           85 DVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             CEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            6899999998 689888865 4688999999999999999999964   9999999999999999999999999999875


Q ss_pred             ccCc-------------------ccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhh
Q 045343          673 TLNQ-------------------SKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY  732 (813)
Q Consensus       673 ~~~~-------------------~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~  732 (813)
                      ....                   .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            4311                   1111344679999999999976 5789999999999999999999999976543222


Q ss_pred             hhhHHHHHHhhccCc---cccccc------------------cccc------------ccccHHHHHHHHHHHHHhcccC
Q 045343          733 AILTDWAFDCYRNEK---LDDLVE------------------GDME------------ALNDIKCVEKLVMVSIWCIQED  779 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~---~~~~~~------------------~~~~------------~~~~~~~~~~l~~l~~~Cl~~d  779 (813)
                      ...   +........   +..+..                  ....            ........+.+.+|+.+||+.|
T Consensus       240 ~~~---i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d  316 (388)
T 3oz6_A          240 LER---IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN  316 (388)
T ss_dssp             HHH---HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred             HHH---HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence            111   111110000   000000                  0000            0000123467899999999999


Q ss_pred             CCCCCCHHHHHHH
Q 045343          780 PSLRPTMKKVLQM  792 (813)
Q Consensus       780 P~~RPt~~evl~~  792 (813)
                      |.+|||+.|++++
T Consensus       317 P~~R~t~~e~l~H  329 (388)
T 3oz6_A          317 PNKRISANDALKH  329 (388)
T ss_dssp             GGGSCCHHHHTTS
T ss_pred             cccCCCHHHHhCC
Confidence            9999999999987

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.5e-37  Score=331.17  Aligned_cols=263  Identities=20%  Similarity=0.286  Sum_probs=194.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      |.+.++||+|+||+||+|...   .++..||||+++.... .....+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSK---LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             eEEEEEEcCCCCEEEEEEEEC---CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            567789999999999999874   3567899999865332 223357789999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |++ |+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence            998 5888888654 4689999999999999999999964   9999999999999999999999999999865433221


Q ss_pred             ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc---
Q 045343          679 AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG---  754 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---  754 (813)
                        .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.......................   
T Consensus       157 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (324)
T 3mtl_A          157 --YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF  234 (324)
T ss_dssp             --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred             --cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence              234568999999999876 56899999999999999999999999865543322111111000011111111100   


Q ss_pred             ------ccc----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 ------DME----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ------~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ...    ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                  000    00011235678899999999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=5e-37  Score=333.58  Aligned_cols=265  Identities=26%  Similarity=0.354  Sum_probs=200.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++......  ..+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNK---DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEET---TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hheeeeEEeecCCEEEEEEEEC---CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            4677789999999999999874   35788999998653222  234578899999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            99999999999988888899999999999999999999965   999999999999999999999999999987654322


Q ss_pred             cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHhh-----
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDCY-----  743 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~-----  743 (813)
                      .  .....||..|+|||.+.+. .++.++||||||+++|||++|+.||......+........        ...+     
T Consensus       180 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          180 V--YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             c--cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence            1  2345689999999999875 6899999999999999999999999765443211100000        0000     


Q ss_pred             -ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 -RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .......+.............++.+.+++.+||+.||.+|||+.|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence             0001111111100000112346789999999999999999999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.5e-36  Score=348.74  Aligned_cols=250  Identities=26%  Similarity=0.295  Sum_probs=204.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||++....   ......+.+|+.++++++||||+++++++.+.+..++
T Consensus       185 ~f~~~~~LG~G~fG~Vy~a~~~---~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          185 TFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEEEEEeeCCCEEEEEEEEC---CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3566789999999999999874   367899999996532   2334568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          597 VYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||||+++|+|.+++....  .+++..++.++.||+.||.|||+.   +|+||||||+||||+.++++||+|||+++....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            999999999999997654  489999999999999999999965   999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh-hhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...   .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.....    ....     
T Consensus       339 ~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~----~~~~-----  406 (576)
T 2acx_A          339 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK----EVPE-----  406 (576)
T ss_dssp             TCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH----HCCC-----
T ss_pred             Ccc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh----cccc-----
Confidence            322   3345799999999999998999999999999999999999999986533211 11111111    0000     


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                           .........+.+++.+||+.||.+||     +++||+++
T Consensus       407 -----~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          407 -----EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             -----cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                 01112357789999999999999999     78999865

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=9.5e-37  Score=342.10  Aligned_cols=255  Identities=24%  Similarity=0.334  Sum_probs=193.7

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--------cccchhhhheeeeeeccccCCcceEEeE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--------QDGEKEFKNEVVVIGQTHHKNLVRLLGF  587 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~  587 (813)
                      .....|.+.+.||+|+||+||+|...   .+++.||||++....        ......+.+|+.++++++||||++++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~  208 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFER---KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF  208 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEEC---CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            34456788899999999999999874   456899999986532        1123358899999999999999999999


Q ss_pred             eecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC---CCEEEe
Q 045343          588 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY---YNARIS  664 (813)
Q Consensus       588 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~---~~~kl~  664 (813)
                      +.. +..++||||+++|+|.+++.....+++..+..++.||++||+|||+.   +|+||||||+|||++.+   ..+||+
T Consensus       209 ~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          209 FDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             EES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             Eec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence            854 55899999999999999999888999999999999999999999964   99999999999999754   459999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |||+++.......   .....||+.|+|||++.+   ..++.++||||||+++|||++|+.||........  +...   
T Consensus       285 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~---  356 (419)
T 3i6u_A          285 DFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQ---  356 (419)
T ss_dssp             CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHH---
T ss_pred             ecccceecCCCcc---ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHH---
Confidence            9999987654321   334679999999999863   5678899999999999999999999975432211  1000   


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......... .     .......+.+.+++.+||+.||.+|||+.|++++
T Consensus       357 -i~~~~~~~~-~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          357 -ITSGKYNFI-P-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             -HHTTCCCCC-H-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -HhcCCCCCC-c-----hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence             011110000 0     0011235678999999999999999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.6e-37  Score=347.33  Aligned_cols=258  Identities=24%  Similarity=0.289  Sum_probs=192.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecC------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------  591 (813)
                      .|++.++||+|+||+||+|...   ..++.||||++....  ....+++.+|+.++++++||||+++++++...      
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             CeEEEEEeecCCCeEEEEEEEC---CCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            4667889999999999999874   357889999997542  23345688999999999999999999999654      


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .+.++||||++++ |.+.+..  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART  213 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred             CeEEEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence            3569999999865 5555543  488999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc------
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN------  745 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~------  745 (813)
                      ......   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...   .+......      
T Consensus       214 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~---~i~~~lg~p~~~~~  287 (464)
T 3ttj_A          214 AGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN---KVIEQLGTPCPEFM  287 (464)
T ss_dssp             ---CCC---C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCSCCHHHH
T ss_pred             cCCCcc---cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCCHHHH
Confidence            654321   345679999999999999999999999999999999999999997654322111   01110000      


Q ss_pred             -------------C-c-----cccccccccc---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 -------------E-K-----LDDLVEGDME---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 -------------~-~-----~~~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                   . .     ..........   ..........+.+|+.+||+.||.+|||++|++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                         0 0     0000000000   00011235678999999999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.2e-37  Score=333.79  Aligned_cols=255  Identities=22%  Similarity=0.294  Sum_probs=186.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEee--------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCD--------  589 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~--------  589 (813)
                      ..+++.++||+|+||.||+|...   ..++.||||++........+.+.+|+.++.++. |+||+++++++.        
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDV---GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEET---TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ceEEEEEEEccCCceEEEEEEEC---CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            35677899999999999999874   367789999986655555667899999999996 999999999983        


Q ss_pred             cCCceEEEEeecCCCchhhhhhc---cCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeCCCCCCcEEEcCCCCEEEe
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFG---NLKPSWNLRTNIAFQIARGLLYLHEDCSAQ--IIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~--ivH~dlk~~NIll~~~~~~kl~  664 (813)
                      .....++|+||+. |+|.+++..   ...+++..++.++.||+.||.|||+.   +  |+||||||+|||++.++.+||+
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence            3335799999996 799888864   45689999999999999999999954   6  9999999999999999999999


Q ss_pred             eccCccccccCcccc----------eeecccccccccCcccc---cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          665 DFGLAKLLTLNQSKA----------IRTAIRGTKGYVAPEWF---RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       665 DfGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~l---~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      |||+++.........          ......||+.|+|||++   .+..++.++||||||+++|||++|+.||.......
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~  260 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR  260 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence            999998765432211          01134589999999998   56678899999999999999999999996432211


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                                         +................+.+++.+||+.||.+|||+.|++++|+.+...
T Consensus       261 -------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          261 -------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                               0000000011111234577899999999999999999999999887643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.6e-36  Score=327.34  Aligned_cols=260  Identities=24%  Similarity=0.337  Sum_probs=204.7

Q ss_pred             CCHHHHHHHHhhcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc-ccCCcceEEe
Q 045343          511 FSYKELEEATDNFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT-HHKNLVRLLG  586 (813)
Q Consensus       511 ~~~~el~~~~~~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g  586 (813)
                      |...+.....|.+. ++||+|+||.||+|...   .+++.||||+++....  ....++.+|+.++.++ +|+||+++++
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISK---STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            44455555666666 88999999999999874   3578999999875432  2345788999999998 4699999999


Q ss_pred             EeecCCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCE
Q 045343          587 FCDEGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNA  661 (813)
Q Consensus       587 ~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~  661 (813)
                      ++.+....++||||+++|+|.+++...  ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.   ++.+
T Consensus        97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~  173 (327)
T 3lm5_A           97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI  173 (327)
T ss_dssp             EEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred             EEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence            999999999999999999999998654  6789999999999999999999964   9999999999999987   7899


Q ss_pred             EEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          662 RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      ||+|||+++.......   .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+....   ...
T Consensus       174 kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---i~~  247 (327)
T 3lm5_A          174 KIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN---ISQ  247 (327)
T ss_dssp             EECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHH
T ss_pred             EEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH---HHh
Confidence            9999999987654322   2345699999999999999999999999999999999999999976543221110   000


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .    ..      ...........+.+.+++.+||+.||.+|||++|++++
T Consensus       248 ~----~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          248 V----NV------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             T----CC------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             c----cc------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            0    00      00001112345678899999999999999999999976

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.4e-36  Score=336.54  Aligned_cols=245  Identities=23%  Similarity=0.284  Sum_probs=188.0

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeec-cccCCcceEEeEeec----CCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLVRLLGFCDE----GQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~----~~~~~lV~e  599 (813)
                      +.||+|+||+||++...   .++..||||+++.     ...+.+|+.++.+ .+|+||+++++++..    ....++|||
T Consensus        68 ~~LG~G~~g~V~~~~~~---~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNK---RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             EEEEEETTEEEEEEEET---TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ceeeeccCeEEEEEEEC---CCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            68999999999999874   4678999999863     2456778877744 489999999998865    567899999


Q ss_pred             ecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCcccccc
Q 045343          600 FLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKLLTL  674 (813)
Q Consensus       600 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla~~~~~  674 (813)
                      |+++|+|.+++...  ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||+++....
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence            99999999999865  3589999999999999999999964   9999999999999997   78999999999987653


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh-hhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA-ILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ...   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+    ..+... .  
T Consensus       217 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~~~~-~--  286 (400)
T 1nxk_A          217 HNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYE-F--  286 (400)
T ss_dssp             -------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHTCCC-C--
T ss_pred             CCc---cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcCccc-C--
Confidence            321   23457899999999999999999999999999999999999999754432110 000000    000000 0  


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                         ...........+.+|+.+||+.||.+|||+.|++++-
T Consensus       287 ---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          287 ---PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             ---CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             ---CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence               0000113457789999999999999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4e-36  Score=344.65  Aligned_cols=253  Identities=24%  Similarity=0.321  Sum_probs=201.0

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ....|.+.++||+|+||+||+|...   ..+..+|||++....  ......+.+|+.++++++||||+++++++.+....
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  111 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDK---VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY  111 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEET---TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEEC---CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3456888999999999999999874   357789999987542  23356789999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLAKL  671 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla~~  671 (813)
                      ++||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||+++.
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            99999999999999998888899999999999999999999964   9999999999999976   45599999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ......   .....||+.|+|||++. ..++.++|||||||++|+|++|+.||......+...       ........ .
T Consensus       189 ~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------~i~~~~~~-~  256 (494)
T 3lij_A          189 FENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR-------KVEKGKYT-F  256 (494)
T ss_dssp             CBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------HHHHTCCC-C
T ss_pred             CCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHhCCCC-C
Confidence            654322   33457999999999986 468999999999999999999999997654322111       11111100 0


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+     .....+..+.+++.+||+.||.+|||+.|++++
T Consensus       257 ~~~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          257 DSP-----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             CSG-----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             Cch-----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            000     011235678899999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.5e-36  Score=324.02  Aligned_cols=248  Identities=21%  Similarity=0.334  Sum_probs=204.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||++...   ..++.+|+|.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDA---DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEEC---CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            4667789999999999999874   356789999986542   1234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++.......
T Consensus        93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence            999999999999998888899999999999999999999964   99999999999999999999999999998765332


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+...      .. .....      ..
T Consensus       170 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~~-~~~~~------~~  234 (294)
T 2rku_A          170 ER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------RI-KKNEY------SI  234 (294)
T ss_dssp             CC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HH-HTTCC------CC
T ss_pred             cc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HH-hhccC------CC
Confidence            22  234568999999999998889999999999999999999999997554322110      00 11100      00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .......+.+++.+||+.||.+|||+.|++++
T Consensus       235 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          235 ----PKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             ----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ----ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                11234678899999999999999999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3e-37  Score=341.63  Aligned_cols=237  Identities=14%  Similarity=0.126  Sum_probs=185.6

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhhee---eeeeccccCCcceEE-------eE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEV---VVIGQTHHKNLVRLL-------GF  587 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------g~  587 (813)
                      +.+.+.||+|+||.||+|...   .+++.||||++...   .....+.+.+|+   +++++++|||||+++       ++
T Consensus        75 y~~~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           75 LVRGTVLGQEDPYAYLEATDQ---ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEC----CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             EEEcceeecCCCEEEEEEEEC---CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            456789999999999999864   35789999999743   223346788999   667777899999998       65


Q ss_pred             eecCC-----------------ceEEEEeecCCCchhhhhhccCCCC-------HHHHHHHHHHHHHHHHHhhhcCCCCe
Q 045343          588 CDEGQ-----------------NRLLVYEFLNNGTLASFLFGNLKPS-------WNLRTNIAFQIARGLLYLHEDCSAQI  643 (813)
Q Consensus       588 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~l~-------~~~~~~i~~~ia~gl~yLH~~~~~~i  643 (813)
                      +.+.+                 ..++||||+ +|+|.+++.....++       +..++.++.||++||+|||+.   +|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            55443                 278999999 689999997654343       488889999999999999965   99


Q ss_pred             eeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCC-----------CCCCccchhhHHH
Q 045343          644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-----------TITAKVDVYSFGV  712 (813)
Q Consensus       644 vH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~~~k~DVwS~Gv  712 (813)
                      +||||||+|||++.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++|||||||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999986432     1344567 999999999887           8999999999999


Q ss_pred             HHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          713 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       713 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ++|||++|+.||........               ...+...      ....++.+.+++.+||+.||.+|||+.|+++
T Consensus       302 il~elltg~~Pf~~~~~~~~---------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGG---------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHSSCCC------CC---------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHCCCCCcccccccc---------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999999999964332110               1111110      0123467889999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.4e-36  Score=330.71  Aligned_cols=248  Identities=21%  Similarity=0.334  Sum_probs=204.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||++...   ..++.+|+|.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDA---DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4667789999999999999874   356789999986542   1234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            999999999999998888899999999999999999999964   99999999999999999999999999998765332


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  .....|+..|+|||++.+..++.++||||||+++|||++|+.||......+...      .. .....      ..
T Consensus       196 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~-~~~~~------~~  260 (335)
T 2owb_A          196 ER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------RI-KKNEY------SI  260 (335)
T ss_dssp             CC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HH-HHTCC------CC
T ss_pred             cc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HH-hcCCC------CC
Confidence            22  234568999999999999889999999999999999999999997544322110      00 00000      00


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .......+.+++.+||+.||.+|||+.|++++
T Consensus       261 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          261 ----PKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             ----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                11234578899999999999999999999974

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4.5e-36  Score=340.75  Aligned_cols=260  Identities=18%  Similarity=0.223  Sum_probs=204.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc-CCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.++||+|+||.||+|...   ..+..||||++...  ....++..|++++..++| +++..+..++.+.+..+|||
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~--~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNI---QTNEEVAIKLENVK--TKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEET---TTCCEEEEEEEETT--CSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEeeCCCEEEEEEEEC---CCCcEEEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            4667899999999999999874   35789999987653  234568899999999987 55666666677788889999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCcccccc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla~~~~~  674 (813)
                      ||+ +++|.+++.. ...+++..++.|+.||+.||.|||+.   +|+||||||+||||   +.++.+||+|||+++.+..
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~  158 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD  158 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence            999 9999999974 56789999999999999999999964   99999999999999   6889999999999987764


Q ss_pred             Ccccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          675 NQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       675 ~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      .....     ......||..|+|||.+.+..++.++||||||++||||++|+.||.......................+.
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  238 (483)
T 3sv0_A          159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE  238 (483)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence            43211     1225679999999999999999999999999999999999999998654322211111111111111111


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      .+.         ...++++.+++..||+.+|++||++.+|+++|+.+.
T Consensus       239 ~l~---------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          239 ALC---------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             HHH---------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHh---------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            110         123568899999999999999999999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3e-36  Score=342.49  Aligned_cols=265  Identities=20%  Similarity=0.288  Sum_probs=185.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec-----CC
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-----GQ  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~  592 (813)
                      .|.+.+.||+|+||+||+|...   .+++.||||++.....  ...+++.+|+.++++++|+||+++++++..     ..
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDK---LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             TEEECCC-------CEEEEEEC---C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CeEEeeEeeecCCeEEEEEEEC---CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            4678899999999999999874   3678999999865322  234568899999999999999999999843     35


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++||||+ +++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+||||+.++.+||+|||+++..
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          131 ELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             CEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             eEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence            689999987 579999998888899999999999999999999964   9999999999999999999999999999876


Q ss_pred             ccCccc-------------------------ceeecccccccccCcccc-cCCCCCCccchhhHHHHHHHHHh-------
Q 045343          673 TLNQSK-------------------------AIRTAIRGTKGYVAPEWF-RNSTITAKVDVYSFGVLLLEIIS-------  719 (813)
Q Consensus       673 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~l-~~~~~~~k~DVwS~Gvvl~ellt-------  719 (813)
                      ......                         ......+||+.|+|||++ ....++.++|||||||+||||++       
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~  286 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA  286 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence            532211                         113445789999999976 55679999999999999999999       


Q ss_pred             ----CCcCCCcccch-----------------hhhhhHHHHHHhhccCc---ccc--------c---c----cccccccc
Q 045343          720 ----CRKSFDIEMGE-----------------EYAILTDWAFDCYRNEK---LDD--------L---V----EGDMEALN  760 (813)
Q Consensus       720 ----G~~p~~~~~~~-----------------~~~~l~~~~~~~~~~~~---~~~--------~---~----~~~~~~~~  760 (813)
                          |+++|.+....                 ........+...+....   +..        .   .    ...+. ..
T Consensus       287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  365 (458)
T 3rp9_A          287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA-ER  365 (458)
T ss_dssp             SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG-GG
T ss_pred             ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH-HH
Confidence                55555432210                 00000011111111000   000        0   0    00000 00


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......+.+|+.+||+.||.+|||++|++++
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            11235678899999999999999999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.8e-36  Score=329.39  Aligned_cols=267  Identities=20%  Similarity=0.257  Sum_probs=198.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE------  590 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------  590 (813)
                      ..|.+.++||+|+||.||+|...   .+++.||||++.....  .....+.+|+.++++++|+||+++++++..      
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHR---KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEET---TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred             cceeEEEEEecCCCcEEEEEEEC---CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence            35778899999999999999874   3678999999864322  224467899999999999999999999876      


Q ss_pred             --CCceEEEEeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          591 --GQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       591 --~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                        ....++||||+++ +|.+.+.. ...+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        94 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           94 RCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             ---CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             cCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence              3468999999986 66666654 46789999999999999999999964   99999999999999999999999999


Q ss_pred             CccccccCccc--ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          668 LAKLLTLNQSK--AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       668 la~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      +++.+......  .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....................
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  249 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            99876532221  11234568999999999876 4579999999999999999999999986554332221111111111


Q ss_pred             cCccccccccc----c----ccccc-H------HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NEKLDDLVEGD----M----EALND-I------KCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~~~~~~~~~~----~----~~~~~-~------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...........    .    ..... .      .....+.+|+.+||+.||.+|||++|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            11111100000    0    00000 0      113568899999999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=4.9e-36  Score=343.23  Aligned_cols=253  Identities=26%  Similarity=0.323  Sum_probs=204.9

Q ss_pred             HHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       517 ~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      ....|++.++||+|+||+||++...   .++..||||++....  ......+.+|+.++++++||||+++++++.+....
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   96 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF   96 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEET---TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEEC---CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEE
Confidence            4567889999999999999999874   357889999986532  23456789999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKL  671 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~  671 (813)
                      ++|+||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++   .++.+||+|||+++.
T Consensus        97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A           97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            99999999999999998888899999999999999999999964   999999999999995   556799999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ......   .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+..   ..+    ....... 
T Consensus       174 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i----~~~~~~~-  241 (486)
T 3mwu_A          174 FQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---KRV----ETGKYAF-  241 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH----HHTCCCS-
T ss_pred             CCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHH----HhCCCCC-
Confidence            654322   334569999999999876 5899999999999999999999999765432211   111    1111100 


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           ........+..+.+++.+||+.||.+|||+.|++++
T Consensus       242 -----~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          242 -----DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -----CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -----CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                 000112335678899999999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-36  Score=330.60  Aligned_cols=262  Identities=26%  Similarity=0.317  Sum_probs=195.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCC-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  592 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++.....  ...+++.+|+.++++++|+||+++++++....     
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDG---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             SEEEEEEC------CEEEEEET---TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             eEEEeEEeeecCCeEEEEEEEC---CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            4667789999999999999874   4678999999864322  22456889999999999999999999997653     


Q ss_pred             -ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          593 -NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                       ..++||||+ +++|.+++.. ..+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence             469999999 8899999876 5688999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc-----
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-----  745 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-----  745 (813)
                      ....     .....+|+.|+|||++.+ ..++.++|||||||+++||++|+.||...........   +......     
T Consensus       178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~---i~~~~g~~~~~~  249 (367)
T 1cm8_A          178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE---IMKVTGTPPAEF  249 (367)
T ss_dssp             CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHHHCCCCHHH
T ss_pred             cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhcCCCCHHH
Confidence            6532     334578999999999877 6789999999999999999999999976543221110   1110000     


Q ss_pred             ------Cc-------ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcC
Q 045343          746 ------EK-------LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVE  798 (813)
Q Consensus       746 ------~~-------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~  798 (813)
                            ..       +.......... ........+.+|+.+||+.||.+|||+.|++++  ++.+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCHHH-HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence                  00       00000000000 011235678899999999999999999999985  555443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2e-36  Score=324.10  Aligned_cols=261  Identities=24%  Similarity=0.339  Sum_probs=184.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+.+.+.||+|+||.||+|...   .++..||||++.... ....+++.+|+.++++++||||+++++++...+..++|
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCA---PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             hhhhhhheeccccceEEEEEEEC---CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34667899999999999999764   356789999986432 23456788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          598 YEFLNNGTLASFLFG--------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~--------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      |||+++++|.+++..        ...+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999863        35689999999999999999999964   9999999999999999999999999999


Q ss_pred             cccccCccc---ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          670 KLLTLNQSK---AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       670 ~~~~~~~~~---~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      .........   .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||..........      .....
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~~  242 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM------LTLQN  242 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH------HHHTS
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH------HHhcc
Confidence            876533211   11234568999999999876 568999999999999999999999997654322111      00000


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .....................+.+++.+||+.||.+||++.|++++
T Consensus       243 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          243 -DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             -SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             -CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence             0000000000000111234678899999999999999999999874

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.5e-36  Score=357.36  Aligned_cols=249  Identities=24%  Similarity=0.287  Sum_probs=205.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeecc-ccCCcceEEeEeecCCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  594 (813)
                      ..+++.+.||+|+||.||+|...   .+++.||||+++..   .....+.+..|..++..+ +|+||+++++++.+.+..
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~---~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERK---GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEES---SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             cceEEEEEEccCCCEEEEEEEEC---CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            44677889999999999999874   46778999999753   233445678888888887 799999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +|||||+++|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+||||+.++++||+|||+++....
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence            99999999999999999888899999999999999999999964   999999999999999999999999999986443


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....  .....||+.|+|||++.+..++.++||||||++||||++|+.||......+..       ..+..        .
T Consensus       495 ~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~-------~~i~~--------~  557 (674)
T 3pfq_A          495 DGVT--TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF-------QSIME--------H  557 (674)
T ss_dssp             TTCC--BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHS--------S
T ss_pred             CCcc--cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHH-------HHHHh--------C
Confidence            3221  34567999999999999999999999999999999999999999865432211       11111        1


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM-----KKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~~  792 (813)
                      ....  .......+.+|+..||+.||.+||++     +||+++
T Consensus       558 ~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          558 NVAY--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             CCCC--CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             CCCC--CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            1111  11235778999999999999999997     777653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=7.6e-36  Score=320.09  Aligned_cols=249  Identities=24%  Similarity=0.304  Sum_probs=196.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeeccccCCcceEEeEe--ecCCc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHHKNLVRLLGFC--DEGQN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~--~~~~~  593 (813)
                      .|.+.+.||+|+||.||++...   .++..||||.++...    ....+.+.+|+.++++++|+||+++++++  .+...
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDS---ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBT---TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             ceeEeeEEecCCCeEEEEEEEC---CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            4677899999999999999863   467889999987532    23346789999999999999999999998  45568


Q ss_pred             eEEEEeecCCCchhhhhhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 RLLVYEFLNNGTLASFLFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      .++||||++++ |.+++..  ...+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||++..
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence            89999999887 6666654  45689999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ..............|+..|+|||++.+..  .+.++||||||+++|||++|+.||.........       ........ 
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~i~~~~~-  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF-------ENIGKGSY-  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-------HHHHHCCC-
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-------HHHhcCCC-
Confidence            65433333234566999999999997654  377999999999999999999999754322111       11111110 


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                             .  ........+.+++.+||+.||.+|||+.|++++
T Consensus       231 -------~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 -------A--IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -------C--CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -------C--CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                   0  011235678899999999999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.4e-36  Score=321.69  Aligned_cols=253  Identities=24%  Similarity=0.332  Sum_probs=200.0

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .....+.+.+.||+|+||.||+|...   .++..||||.+...  ...+++.+|+.++.+++|+||+++++++.+....+
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK---ETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET---TTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC---CCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            33455677889999999999999874   35789999998753  34567899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+++++|.+++. ....+++..++.++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||++.....
T Consensus       101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            9999999999999997 356789999999999999999999964   999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ....  .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..........      .. ........   
T Consensus       178 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~-~~~~~~~~---  245 (314)
T 3com_A          178 TMAK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF------MI-PTNPPPTF---  245 (314)
T ss_dssp             TBSC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HH-HHSCCCCC---
T ss_pred             hccc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH------HH-hcCCCccc---
Confidence            3221  234568999999999999899999999999999999999999997543221110      00 00000000   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          .........+.+++.+||+.||.+|||+.+++++
T Consensus       246 ----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          246 ----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             ----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                0111235678899999999999999999999863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.3e-36  Score=344.65  Aligned_cols=254  Identities=26%  Similarity=0.313  Sum_probs=207.2

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +....|.+.+.||+|+||.||++...   ..+..||||++....   ....+.+.+|+.++++++||||+++++++.+..
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   99 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDK---ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG   99 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cccCceEEeeEEecCCCEEEEEEEEC---CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            34567888999999999999999874   467899999986532   233456899999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE---cCCCCEEEeeccCc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLA  669 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll---~~~~~~kl~DfGla  669 (813)
                      ..++|+||+.+|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||+   +.++.+||+|||++
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            9999999999999999999888999999999999999999999965   99999999999999   56789999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +.......   .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+..   .    ........
T Consensus       177 ~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~----~i~~~~~~  245 (484)
T 3nyv_A          177 THFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL---K----KVEKGKYT  245 (484)
T ss_dssp             HHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H----HHHHCCCC
T ss_pred             EEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH---H----HHHcCCCC
Confidence            87654322   234569999999999876 6899999999999999999999999765432211   1    11111110


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .      ........++.+.+++.+||+.||.+|||+.|++++
T Consensus       246 ~------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          246 F------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             C------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             C------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            0      001112345778899999999999999999999964

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-36  Score=327.69  Aligned_cols=263  Identities=24%  Similarity=0.295  Sum_probs=198.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-----ccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-----DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ..|.+.+.||+|+||.||+|...   .+++.||||+++....     ...+.+.+|+.++++++|+||+++++++.+...
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDK---NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECS---SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             cccEEEeEEeecCCEEEEEEEEC---CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            45778899999999999999864   3578899999864321     123467899999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .++||||+++ +|.+++... ..+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            9999999986 888888654 4688999999999999999999965   9999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKL  748 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~  748 (813)
                      ......  .....||+.|+|||.+.+. .++.++||||||+++|||++|..||......+..   .........   ...
T Consensus       163 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~---~~i~~~~~~~~~~~~  237 (346)
T 1ua2_A          163 GSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL---TRIFETLGTPTEEQW  237 (346)
T ss_dssp             TSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCTTTS
T ss_pred             cCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHHHcCCCChhhh
Confidence            533221  3345689999999999764 5789999999999999999999998765432211   111111110   111


Q ss_pred             ccc---cc---cc-ccc----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          749 DDL---VE---GD-MEA----LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       749 ~~~---~~---~~-~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ...   .+   .. ...    .........+.+++.+||+.||.+|||+.|++++-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            000   00   00 000    00012347889999999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.8e-36  Score=329.57  Aligned_cols=253  Identities=23%  Similarity=0.347  Sum_probs=202.6

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--------cchhhhheeeeeecc-ccCCcceEEeEe
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--------GEKEFKNEVVVIGQT-HHKNLVRLLGFC  588 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~g~~  588 (813)
                      ...|.+.+.||+|+||.||+|...   .++..||||+++.....        ..+.+.+|+.++.++ +||||+++++++
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHR---ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhcccceEEecCCCEEEEEEEEC---CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            345667789999999999999874   35789999998653211        134578899999999 799999999999


Q ss_pred             ecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          589 DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       589 ~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                      ......++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||+
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence            99999999999999999999998888899999999999999999999964   999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccC------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRN------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +..+.....   .....||+.|+|||++.+      ..++.++||||||+++|||++|+.||.........   ...   
T Consensus       247 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~---~~i---  317 (365)
T 2y7j_A          247 SCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML---RMI---  317 (365)
T ss_dssp             CEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH---
T ss_pred             ccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH---HHH---
Confidence            987664332   234679999999999863      35788999999999999999999999754322111   111   


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ...... ...+.     ....+..+.+++.+||+.||.+|||+.|++++
T Consensus       318 -~~~~~~-~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          318 -MEGQYQ-FSSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             -HHTCCC-CCHHH-----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -HhCCCC-CCCcc-----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             011000 00000     01234678899999999999999999999874

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.5e-36  Score=318.94  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=195.2

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecCCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNG  604 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~~g  604 (813)
                      ..||+|+||.||+|...   .++..||||.+........+.+.+|+.++++++|+||+++++++.+.+..++||||++++
T Consensus        28 ~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDL---SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             CEEEECSSSEEEEEEET---TTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEeecCcEEEEEEEEC---CCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            47999999999999874   356789999997655555677999999999999999999999999999999999999999


Q ss_pred             chhhhhhcc---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCccccccCcccce
Q 045343          605 TLASFLFGN---LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLNQSKAI  680 (813)
Q Consensus       605 sL~~~l~~~---~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~  680 (813)
                      +|.+++...   ..+++..+..++.||++||.|||+.   +|+|+||||+||+++. ++.+||+|||++.........  
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--  179 (295)
T 2clq_A          105 SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--  179 (295)
T ss_dssp             EHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------
T ss_pred             CHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc--
Confidence            999999754   3457888999999999999999964   9999999999999987 899999999999876532211  


Q ss_pred             eecccccccccCcccccCCC--CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          681 RTAIRGTKGYVAPEWFRNST--ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       681 ~~~~~gt~~y~aPE~l~~~~--~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .....|++.|+|||++.+..  ++.++||||||+++|||++|+.||........... ..  ...  .     ..+.   
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~--~~~--~-----~~~~---  246 (295)
T 2clq_A          180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KV--GMF--K-----VHPE---  246 (295)
T ss_dssp             -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HH--HHH--C-----CCCC---
T ss_pred             ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hh--ccc--c-----cccc---
Confidence            23456899999999997643  78999999999999999999999975432221110 00  000  0     0001   


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ........+.+++.+||+.||++||++.|++++
T Consensus       247 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          247 -IPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             -CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             -ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             111335678899999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.2e-36  Score=321.93  Aligned_cols=248  Identities=27%  Similarity=0.393  Sum_probs=203.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +.+.+.||+|+||.||+|...   .+++.||||.+.... ....+.+.+|+.++++++|+||+++++++.+....++|||
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDN---RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHhhhhcccCCeEEEEEEEC---CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            567789999999999999864   367899999987543 2334678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++++|.+++.. ..+++..++.++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||++......... 
T Consensus       101 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-  175 (303)
T 3a7i_A          101 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-  175 (303)
T ss_dssp             CCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC-
T ss_pred             eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc-
Confidence            9999999999865 4689999999999999999999964   9999999999999999999999999999876543322 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..........   .    .......     ..   
T Consensus       176 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~----~~~~~~~-----~~---  239 (303)
T 3a7i_A          176 -RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF---L----IPKNNPP-----TL---  239 (303)
T ss_dssp             -BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---H----HHHSCCC-----CC---
T ss_pred             -cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH---H----hhcCCCC-----CC---
Confidence             234568999999999999899999999999999999999999997543322111   0    0001000     01   


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                       .......+.+++..||+.||.+|||+.|++++.
T Consensus       240 -~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          240 -EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             -CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             -ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence             112346788999999999999999999998753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=5.2e-37  Score=324.75  Aligned_cols=255  Identities=23%  Similarity=0.315  Sum_probs=199.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEee--cCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCD--EGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~  595 (813)
                      .|++.+.||+|+||.||++...   .+++.||+|.+....  ....+.+.+|+.++++++||||+++++++.  .....+
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRK---SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             heeeehhccCCCCcEEEEEEEC---CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            4667789999999999999874   367899999987532  223456889999999999999999999874  466789


Q ss_pred             EEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          596 LVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDC--SAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +||||+++++|.+++...    ..+++..++.++.||+.||.|||+..  ..+|+|+||||+||+++.++.+||+|||++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            999999999999999653    34899999999999999999999751  112999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +........  .....|+..|+|||.+.+..++.++||||||+++|||++|+.||......+.   ..    ....+...
T Consensus       164 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~----~i~~~~~~  234 (279)
T 2w5a_A          164 RILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---AG----KIREGKFR  234 (279)
T ss_dssp             HHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH----HHHHTCCC
T ss_pred             eeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH---HH----HHhhcccc
Confidence            876543211  2234689999999999998999999999999999999999999975532211   11    11111111


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      .+         ....+..+.+++.+||+.||.+||++.||++++..
T Consensus       235 ~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          235 RI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             CC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cC---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            11         11335778999999999999999999999998754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.8e-36  Score=334.60  Aligned_cols=251  Identities=11%  Similarity=0.052  Sum_probs=180.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeecc--ccCCcceEE-------eEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQT--HHKNLVRLL-------GFC  588 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------g~~  588 (813)
                      +.+.++||+|+||.||+|...   .+++.||||+++....   ...+.+.+|+.+++.+  +||||++++       +++
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDV---ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             eeeeeeccCCCCEEEEEEEEC---CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            567789999999999999874   3678999999976432   2234577785544444  699988755       333


Q ss_pred             ecC-----------------CceEEEEeecCCCchhhhhhcc-CCCCHHHH------HHHHHHHHHHHHHhhhcCCCCee
Q 045343          589 DEG-----------------QNRLLVYEFLNNGTLASFLFGN-LKPSWNLR------TNIAFQIARGLLYLHEDCSAQII  644 (813)
Q Consensus       589 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~------~~i~~~ia~gl~yLH~~~~~~iv  644 (813)
                      ...                 ...++||||++ |+|.+++... ..+.+..+      +.++.||++||+|||+.   +|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv  216 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV  216 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence            322                 23799999999 8999999763 34566666      78889999999999964   999


Q ss_pred             eCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCc
Q 045343          645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRK  722 (813)
Q Consensus       645 H~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~  722 (813)
                      ||||||+|||++.++.+||+|||+++.....     .....+|+.|+|||++.+  ..++.++|||||||++|||++|+.
T Consensus       217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~  291 (371)
T 3q60_A          217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL  291 (371)
T ss_dssp             ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999876432     224457799999999987  679999999999999999999999


Q ss_pred             CCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       723 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ||..........        +.....................++.+.+++.+||+.||++|||+.|+++
T Consensus       292 Pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          292 PFGLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             STTBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            997653321110        0000001111111111111234678899999999999999999999975

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=3.3e-36  Score=319.69  Aligned_cols=244  Identities=22%  Similarity=0.315  Sum_probs=197.1

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeecc-ccCCcceEEeEeecCCce
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  594 (813)
                      ...+.+.+.||+|+||.||+|...   .+++.||||+++...  .....++.+|+..+.++ +||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~   86 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKR---LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM   86 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEc---CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence            456778899999999999999874   357899999987532  22345688899999998 999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-------------
Q 045343          595 LLVYEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-------------  657 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-------------  657 (813)
                      ++||||+++++|.+++...    ..+++..++.++.||++||.|||+.   +|+||||||+|||++.             
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred             EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence            9999999999999999764    5689999999999999999999964   9999999999999984             


Q ss_pred             ------CCCEEEeeccCccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          658 ------YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       658 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                            ...+||+|||++.......      ...||+.|+|||.+.+. .++.++||||||++++||++|.+++..... 
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-  236 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ-  236 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-
T ss_pred             ccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-
Confidence                  4479999999998765432      23489999999999776 566899999999999999999887643211 


Q ss_pred             hhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          731 EYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                               ...........+         .......+.+++.+||+.||.+|||+.|++++
T Consensus       237 ---------~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          237 ---------WHEIRQGRLPRI---------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             ---------HHHHHTTCCCCC---------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ---------HHHHHcCCCCCC---------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence                     011111111111         11235678899999999999999999999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=4.4e-36  Score=317.10  Aligned_cols=247  Identities=25%  Similarity=0.349  Sum_probs=195.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQ---LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEEC---CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4667789999999999999874   357789999986532   2234568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++++|.+++.....+++..+..++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||++.......
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  165 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  165 (276)
T ss_dssp             EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred             EEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence            999999999999998888899999999999999999999965   99999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      .   .....+++.|+|||.+.+... +.++||||||+++|||++|+.||........   ..    ....... .     
T Consensus       166 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~----~~~~~~~-~-----  229 (276)
T 2h6d_A          166 F---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---FK----KIRGGVF-Y-----  229 (276)
T ss_dssp             --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH----HHHHCCC-C-----
T ss_pred             c---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HH----HhhcCcc-c-----
Confidence            2   233468999999999988765 6899999999999999999999975432211   11    1111100 0     


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          ........+.+++.+||+.||.+|||+.|++++
T Consensus       230 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          230 ----IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ----CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                011234678899999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.2e-36  Score=358.92  Aligned_cols=262  Identities=23%  Similarity=0.354  Sum_probs=207.9

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ++....+.+.+.||+|+||.||+|........+..||||+++.... ...+.+.+|+.++++++||||+++++++. ++.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence            3444567788999999999999999876555678899999875322 23467899999999999999999999985 456


Q ss_pred             eEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 RLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .++||||+++|+|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            89999999999999999755 4689999999999999999999964   9999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ....... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+..   ..+.    .....  
T Consensus       542 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~---~~i~----~~~~~--  611 (656)
T 2j0j_A          542 EDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---GRIE----NGERL--  611 (656)
T ss_dssp             CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHHH----HTCCC--
T ss_pred             CCCccee-ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHH----cCCCC--
Confidence            5432221 233457789999999998899999999999999999997 99999754332211   1111    11000  


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                             ......+..+.+++.+||+.||.+|||+.||++.|+.++
T Consensus       612 -------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          612 -------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                   011234578899999999999999999999999998765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=7.5e-36  Score=343.21  Aligned_cols=251  Identities=24%  Similarity=0.319  Sum_probs=200.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-------------ccchhhhheeeeeeccccCCcceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-------------DGEKEFKNEVVVIGQTHHKNLVRLL  585 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~  585 (813)
                      ..|.+.++||+|+||+||+|...   ..+..||||++.....             ...+++.+|+.++++++||||++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEK---NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEET---TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cceEEEeEecccCCeEEEEEEEC---CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            34677899999999999999874   3567899999875321             2245688999999999999999999


Q ss_pred             eEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC---CEE
Q 045343          586 GFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY---NAR  662 (813)
Q Consensus       586 g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~---~~k  662 (813)
                      +++.+....++||||+++|+|.+++.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++   .+|
T Consensus       113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          113 DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence            99999999999999999999999998888899999999999999999999964   999999999999998765   699


Q ss_pred             EeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       663 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      |+|||+++.......   .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||......+...       .
T Consensus       190 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------~  258 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK-------K  258 (504)
T ss_dssp             ECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------H
T ss_pred             EEECCCCEEcCCCCc---cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------H
Confidence            999999987654322   334569999999999874 68999999999999999999999998654322111       1


Q ss_pred             hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........  +    .......+..+.+++.+||+.||.+|||+.|++++
T Consensus       259 i~~~~~~~--~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          259 VEKGKYYF--D----FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHCCCCC--C----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHcCCCCC--C----ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11111000  0    00001235678999999999999999999999865

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.3e-36  Score=338.23  Aligned_cols=198  Identities=26%  Similarity=0.418  Sum_probs=165.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecC-----C
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----Q  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~  592 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||+++....  ...+.+.+|+.++++++|+||+++++++...     .
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDK---NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CEEEEEEEeecCCEEEEEEEEC---CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            4777899999999999999874   4678999999975322  2345788999999999999999999999766     5


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++||||+. ++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            7899999986 59999999888899999999999999999999964   9999999999999999999999999999876


Q ss_pred             ccCccc--------------------ceeecccccccccCcccc-cCCCCCCccchhhHHHHHHHHHhCCcCC
Q 045343          673 TLNQSK--------------------AIRTAIRGTKGYVAPEWF-RNSTITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       673 ~~~~~~--------------------~~~~~~~gt~~y~aPE~l-~~~~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      ......                    .......||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            543211                    113456799999999986 5567999999999999999999865554

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=3.1e-36  Score=322.63  Aligned_cols=252  Identities=22%  Similarity=0.337  Sum_probs=197.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+++.+.||+|+||.||+|...   .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++||
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNK---ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEET---TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEc---CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            34677889999999999999874   357789999997665556678899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++++|.+++.. ...+++..++.++.||++||.|||+.   +++|+||||+||+++.++.+||+|||++........
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ  172 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence            99999999999875 46689999999999999999999964   999999999999999999999999999765332111


Q ss_pred             cceeecccccccccCcccc-----cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWF-----RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l-----~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      .  .....|+..|+|||++     ....++.++||||||+++|||++|+.||........  +    ...... ..... 
T Consensus       173 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~-~~~~~-  242 (302)
T 2j7t_A          173 K--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--L----LKIAKS-DPPTL-  242 (302)
T ss_dssp             C-------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--H----HHHHHS-CCCCC-
T ss_pred             c--cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--H----HHHhcc-CCccc-
Confidence            1  2335689999999998     466788999999999999999999999975433211  0    111111 00000 


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ......+..+.+++.+||+.||.+|||+.+++++
T Consensus       243 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          243 ------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             ------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             ------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                  1112335678899999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.9e-36  Score=331.95  Aligned_cols=256  Identities=22%  Similarity=0.304  Sum_probs=193.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC--------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG--------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~--------  591 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++...    .....+|++++++++|+||+++++++...        
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~---~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDI---ESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEET---TTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             eEEEEEEEEeccCEEEEEEEEC---CCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            4677899999999999999874   46789999998643    23446799999999999999999998432        


Q ss_pred             ------------------------------CceEEEEeecCCCchhhhhh----ccCCCCHHHHHHHHHHHHHHHHHhhh
Q 045343          592 ------------------------------QNRLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHE  637 (813)
Q Consensus       592 ------------------------------~~~~lV~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gl~yLH~  637 (813)
                                                    ...++||||++ ++|.+.+.    ....+++..+..++.||++||+|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                          23789999998 47766664    45678999999999999999999994


Q ss_pred             cCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHH
Q 045343          638 DCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLL  715 (813)
Q Consensus       638 ~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~  715 (813)
                         .+|+||||||+|||++ .++.+||+|||+++.+.....   .....+|+.|+|||.+.+. .++.++|||||||++|
T Consensus       160 ---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          160 ---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             ---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             ---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence               5999999999999998 688999999999987654332   2345689999999998775 4899999999999999


Q ss_pred             HHHhCCcCCCcccchhhhhhHHHHHHhhcc---------------CcccccccccccccccHHHHHHHHHHHHHhcccCC
Q 045343          716 EIISCRKSFDIEMGEEYAILTDWAFDCYRN---------------EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDP  780 (813)
Q Consensus       716 elltG~~p~~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP  780 (813)
                      ||++|+.||......+...  . .......               .....+.............+..+.+|+.+||+.||
T Consensus       234 ell~g~~pf~~~~~~~~~~--~-i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLV--R-IIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHH--H-HHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHhCCCCCCCCChHHHHH--H-HHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            9999999998654432211  1 1111000               00011111111111122345678999999999999


Q ss_pred             CCCCCHHHHHHH
Q 045343          781 SLRPTMKKVLQM  792 (813)
Q Consensus       781 ~~RPt~~evl~~  792 (813)
                      .+|||+.|++++
T Consensus       311 ~~R~t~~e~l~h  322 (383)
T 3eb0_A          311 DLRINPYEAMAH  322 (383)
T ss_dssp             GGSCCHHHHHTS
T ss_pred             hhCCCHHHHhcC
Confidence            999999999853

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=8.7e-36  Score=322.50  Aligned_cols=254  Identities=24%  Similarity=0.331  Sum_probs=198.1

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--------cccchhhhheeeeeeccccCCcceEEeE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--------QDGEKEFKNEVVVIGQTHHKNLVRLLGF  587 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~g~  587 (813)
                      .....|.+.+.||+|+||.||+|...   .+++.||||.+....        ......+.+|+.++++++|+||++++++
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   83 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFER---KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF   83 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEc---CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence            34567888999999999999999874   367899999986431        1123458899999999999999999999


Q ss_pred             eecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEe
Q 045343          588 CDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARIS  664 (813)
Q Consensus       588 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~  664 (813)
                      +..+. .++||||+++++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||++.++.   +||+
T Consensus        84 ~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~  159 (322)
T 2ycf_A           84 FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT  159 (322)
T ss_dssp             EESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred             EcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence            87654 899999999999999998888899999999999999999999964   9999999999999987654   9999


Q ss_pred             eccCccccccCcccceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHH
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD  741 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~  741 (813)
                      |||+++.......   .....||+.|+|||++.   ...++.++||||||+++|||++|+.||........  +..... 
T Consensus       160 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~-  233 (322)
T 2ycf_A          160 DFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT-  233 (322)
T ss_dssp             CCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH-
T ss_pred             cCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH-
Confidence            9999987653221   23356899999999974   56788999999999999999999999975433211  111110 


Q ss_pred             hhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                         ......  .+.    ......+.+.+++.+||+.||.+||++.|+++
T Consensus       234 ---~~~~~~--~~~----~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          234 ---SGKYNF--IPE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             ---HTCCCC--CHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---hCcccc--Cch----hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence               011000  000    00123567899999999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.2e-35  Score=340.35  Aligned_cols=249  Identities=27%  Similarity=0.316  Sum_probs=201.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      +.+.+.||+|+||.||++...   .+++.||||++....   ......+.+|+.++++++||||+++++++.+....++|
T Consensus       187 f~~~~~LG~G~fG~Vy~a~~~---~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          187 FLDFRVLGRGGFGEVFACQMK---ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             EEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            455678999999999999874   367899999997532   22345688999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhcc----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          598 YEFLNNGTLASFLFGN----LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||+++|+|.+++...    ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++++||+|||+++.+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            9999999999998753    4689999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh-hhhhHHHHHHhhccCcccccc
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      .....  .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+...+   . .       
T Consensus       341 ~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i---~-~-------  407 (543)
T 3c4z_A          341 AGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV---L-E-------  407 (543)
T ss_dssp             TTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH---H-H-------
T ss_pred             CCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH---h-h-------
Confidence            44322  234579999999999999999999999999999999999999997643211 11111111   1 0       


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM-----KKVLQ  791 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~  791 (813)
                       ....  .....+..+.+++.+||+.||.+||++     ++|++
T Consensus       408 -~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          408 -QAVT--YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -CCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -cccC--CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence             0000  112335778899999999999999975     66664

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.5e-35  Score=319.91  Aligned_cols=258  Identities=20%  Similarity=0.295  Sum_probs=198.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeec--CCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDE--GQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~--~~~~~  595 (813)
                      ..|.+.++||+|+||+||+|...   .+++.||||+++.   ...+.+.+|+.++++++ |+||+++++++.+  ....+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINI---TNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             CceEEEEEecccCCeEEEEEEEC---CCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            34677899999999999999874   3678999999864   23567899999999997 9999999999987  56789


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~~  674 (813)
                      +||||+++++|.+++.   .+++..++.++.||++||+|||+.   +|+||||||+|||++.++ .+||+|||+++....
T Consensus       110 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             EEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             EEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999999885   378899999999999999999964   999999999999999776 899999999987654


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH--------HHhhcc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA--------FDCYRN  745 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~  745 (813)
                      ...   .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... ....        ......
T Consensus       184 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~  259 (330)
T 3nsz_A          184 GQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL-VRIAKVLGTEDLYDYIDK  259 (330)
T ss_dssp             TCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHH-HHHHHHHCHHHHHHHHHH
T ss_pred             CCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHH-HHHHHhcCCchhhhHHHH
Confidence            432   234568999999999877 678999999999999999999999996443321110 0000        000000


Q ss_pred             Cc------c--------cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EK------L--------DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~------~--------~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..      .        ...................+.+++.+||+.||.+|||++|++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00      0        00000000111112246788999999999999999999999975

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=6.6e-36  Score=336.18  Aligned_cols=198  Identities=24%  Similarity=0.319  Sum_probs=169.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc------ccCCcceEEeEeecCC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT------HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~  592 (813)
                      ..|++.++||+|+||+||+|...   ..++.||||+++.. ....+++.+|+.+++.+      +|+||+++++++....
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~---~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDH---KVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEET---TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             CcEEEEEEcccCccEEEEEEEEC---CCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            34777899999999999999874   35789999999753 22335677788877776      5779999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC--EEEeeccC
Q 045343          593 NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN--ARISDFGL  668 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~--~kl~DfGl  668 (813)
                      ..++||||+. ++|.+++...  ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.  +||+|||+
T Consensus       173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence            9999999996 6898888765  3589999999999999999999965   9999999999999999887  99999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG  729 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~  729 (813)
                      +......     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            9765432     2345789999999999999999999999999999999999999976544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.2e-35  Score=323.08  Aligned_cols=262  Identities=22%  Similarity=0.305  Sum_probs=202.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC------cceEEeEeecCC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN------LVRLLGFCDEGQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~  592 (813)
                      ..|.+.+.||+|+||.||+|...  ...+..||||+++.. ....+.+.+|+.++++++|++      ++++++++.+.+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDH--KAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET--TTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             CceEEEEEEecCCCeEEEEEEec--CCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            45778899999999999999863  235789999998753 233456888999999987765      999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-------------
Q 045343          593 NRLLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-------------  657 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-------------  657 (813)
                      ..++||||+ +++|.+++....  .+++..++.++.||++||+|||+.   +|+||||||+|||++.             
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence            999999999 889999997654  678999999999999999999964   9999999999999987             


Q ss_pred             ------CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          658 ------YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       658 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                            ++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  678999999999875432     234568999999999999999999999999999999999999997654433


Q ss_pred             hhhhHHHHHHhhccC-----ccccc---------------------ccccc-cccccHHHHHHHHHHHHHhcccCCCCCC
Q 045343          732 YAILTDWAFDCYRNE-----KLDDL---------------------VEGDM-EALNDIKCVEKLVMVSIWCIQEDPSLRP  784 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~-----~~~~~---------------------~~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  784 (813)
                      ...............     .....                     ..+.. .........+.+.+++.+||+.||.+||
T Consensus       242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  321 (339)
T 1z57_A          242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI  321 (339)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence            221111110000000     00000                     00000 0011234578899999999999999999


Q ss_pred             CHHHHHHH
Q 045343          785 TMKKVLQM  792 (813)
Q Consensus       785 t~~evl~~  792 (813)
                      |+.|++++
T Consensus       322 t~~ell~h  329 (339)
T 1z57_A          322 TLREALKH  329 (339)
T ss_dssp             CHHHHTTS
T ss_pred             CHHHHhcC
Confidence            99999865

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.3e-36  Score=323.62  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=183.6

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ..+++.++||+|+||+||++...   .+++.||||+++.....  ..+.+.++...++.++||||+++++++.+++..++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHV---PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEec---CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            45677899999999999999874   36789999998653221  12234455555788899999999999999999999


Q ss_pred             EEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          597 VYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ||||++ |+|.+++..    ...+++..++.++.||+.||.|||+.  .+|+||||||+||+++.++.+||+|||+++..
T Consensus        84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            999997 588777653    46789999999999999999999952  38999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWF----RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l----~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      .....   .....||+.|+|||++    .+..++.++||||||+++|||++|+.||......... +.    ...... .
T Consensus       161 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~----~~~~~~-~  231 (290)
T 3fme_A          161 VDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LK----QVVEEP-S  231 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HH----HHHHSC-C
T ss_pred             ccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH-HH----HHhccC-C
Confidence            54322   2334689999999996    5567889999999999999999999999753322111 11    111110 0


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ..        ......+..+.+++.+||+.||.+|||+.|+++
T Consensus       232 ~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 PQ--------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CC--------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC--------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            00        111123567899999999999999999999987

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.7e-35  Score=316.34  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=202.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---------ccchhhhheeeeeeccc-cCCcceEEeEee
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---------DGEKEFKNEVVVIGQTH-HKNLVRLLGFCD  589 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~  589 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||.++....         ...+.+.+|+.++++++ ||||+++++++.
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHK---PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             ccceeeeecCCCceEEEEEEEc---CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            4667789999999999999874   4678999999865321         12345788999999995 999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +....++||||+++++|.+++.....+++..++.++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence            9999999999999999999998888899999999999999999999964   9999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCccccc------CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhh
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFR------NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      ........   .....+++.|+|||++.      ...++.++||||||+++|||++|+.||.........   ...    
T Consensus       172 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~----  241 (298)
T 1phk_A          172 CQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML---RMI----  241 (298)
T ss_dssp             EECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH----
T ss_pred             hhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH---HHH----
Confidence            87654322   23456899999999885      456788999999999999999999999754332111   100    


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...... .     ........+..+.+++.+||+.||.+|||+.|++++
T Consensus       242 ~~~~~~-~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          242 MSGNYQ-F-----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             HHTCCC-C-----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             hcCCcc-c-----CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            011100 0     001112345778999999999999999999999863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=9.1e-36  Score=334.21  Aligned_cols=256  Identities=23%  Similarity=0.308  Sum_probs=191.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC----C--c
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG----Q--N  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~----~--~  593 (813)
                      .|.+.+.||+|+||.||+|...   ..++.||||++...    .+.+.+|++++++++|+|||++++++...    +  .
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~---~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEEC---CCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            3667789999999999999884   35789999998643    23456799999999999999999988432    1  2


Q ss_pred             eEEEEeecCCCchhhhhh----ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-CCEEEeeccC
Q 045343          594 RLLVYEFLNNGTLASFLF----GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-YNARISDFGL  668 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-~~~kl~DfGl  668 (813)
                      .++||||+++ +|.+.+.    ....+++..++.++.||++||+|||+   .+|+||||||+||||+.+ +.+||+|||+
T Consensus       128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchh
Confidence            6799999986 5555543    35678999999999999999999995   599999999999999955 6789999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc--
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN--  745 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--  745 (813)
                      ++.+.....   .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+..  .... ..+..  
T Consensus       204 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l--~~i~-~~lg~p~  277 (420)
T 1j1b_A          204 AKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL--VEII-KVLGTPT  277 (420)
T ss_dssp             CEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHH-HHHCSCC
T ss_pred             hhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH-HHhCCCC
Confidence            987654322   2345789999999998765 7899999999999999999999999865432211  1111 11000  


Q ss_pred             --------Cccccccccccc-----ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 --------EKLDDLVEGDME-----ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 --------~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                              ....+...+.+.     ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       278 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                    000111011110     00111235788999999999999999999999965

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=321.11  Aligned_cols=255  Identities=27%  Similarity=0.393  Sum_probs=196.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.+.||+|+||.||+|...      ..+|||+++...  ....+.+.+|+.++++++|+||+++++++.+....++|
T Consensus        34 ~~~~~~~lg~G~~g~V~~~~~~------~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           34 QLEIGELIGKGRFGQVYHGRWH------GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             CEECCCBCCCSSSSEEEEEEES------SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             HeEEeeEeccCCceEEEEEEEc------CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            4567799999999999999863      248999886432  23346788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      +||+++++|.+++.... .+++..++.++.||++||+|||+.   +|+||||||+|||++ ++.+||+|||+++......
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence            99999999999998754 689999999999999999999965   999999999999998 6799999999987653221


Q ss_pred             c---cceeecccccccccCcccccC---------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          677 S---KAIRTAIRGTKGYVAPEWFRN---------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       677 ~---~~~~~~~~gt~~y~aPE~l~~---------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      .   ........|++.|+|||.+..         ..++.++||||||+++|||++|+.||.....+...      .. ..
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~-~~  256 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII------WQ-MG  256 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH------HH-HH
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HH-hc
Confidence            1   111233458999999999864         34788999999999999999999999755432211      01 11


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      ........        ....+..+.+++.+||+.||.+|||+.+++++|+.+.+.
T Consensus       257 ~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          257 TGMKPNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             TTCCCCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             cCCCCCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            11111111        112245688999999999999999999999999988755

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=5.7e-36  Score=329.60  Aligned_cols=257  Identities=26%  Similarity=0.333  Sum_probs=180.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecC------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------  591 (813)
                      .|.+.+.||+|+||.||+|...   .++..||||++.....  ...+.+.+|+.++++++|+||+++++++...      
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             TEEEEEECC----CCEEEEEET---TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             ceEEeeEEeecCCeEEEEEEEC---CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            4667789999999999999864   4678999999865322  2345688999999999999999999998654      


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ...++|+|++ +++|.+++.. ..+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~  181 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH  181 (367)
T ss_dssp             CCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred             CeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence            5679999998 7899998865 5689999999999999999999954   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EK  747 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~  747 (813)
                      ....     .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||...........   +......   +.
T Consensus       182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~---i~~~~g~p~~~~  253 (367)
T 2fst_X          182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL---ILRLVGTPGAEL  253 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCSCCHHH
T ss_pred             cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCCHHH
Confidence            5432     234578999999999877 6789999999999999999999999976543221111   1111100   00


Q ss_pred             cccc--------ccc--ccccc----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDDL--------VEG--DMEAL----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~~--------~~~--~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      +..+        +..  .....    ........+.+|+.+||+.||.+|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            0000        000  00000    001224678899999999999999999999976

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.3e-35  Score=326.91  Aligned_cols=263  Identities=23%  Similarity=0.312  Sum_probs=194.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCc------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN------  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~------  593 (813)
                      .|.+.+.||+|+||+||+|...    ....+|+|++...    .....+|++++++++|+||+++++++.....      
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~----~~~~~aikk~~~~----~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLV----ESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET----TTEEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEEC----CCCeEEEEEEecC----cchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            4677899999999999999874    3345899987542    2234579999999999999999999854433      


Q ss_pred             eEEEEeecCCCchhhhh---hccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l---~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla  669 (813)
                      .++||||++++.+....   .....+++..++.++.||++||+|||+.   +|+||||||+|||++ .++.+||+|||++
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            78999999886554433   2356789999999999999999999964   999999999999999 7999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH--------
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF--------  740 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------  740 (813)
                      +.......   .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+.........        
T Consensus       190 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          190 KILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI  266 (394)
T ss_dssp             EECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             ccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            87654332   2345689999999998765 58999999999999999999999998655432211100000        


Q ss_pred             Hh----hccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcC
Q 045343          741 DC----YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGV  796 (813)
Q Consensus       741 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~  796 (813)
                      ..    ........+................+.+|+.+||+.||.+|||+.|++++  ++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            00    00001111111111111112245688999999999999999999999976  4444

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.4e-35  Score=324.45  Aligned_cols=257  Identities=20%  Similarity=0.333  Sum_probs=202.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccc-----------------hhhhheeeeeeccccCCc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-----------------KEFKNEVVVIGQTHHKNL  581 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~-----------------~~~~~E~~~l~~l~h~ni  581 (813)
                      ..|.+.+.||+|+||.||+|..     ++..||||++........                 +.+.+|+.++++++||||
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            3467789999999999999987     678999999975422211                 678999999999999999


Q ss_pred             ceEEeEeecCCceEEEEeecCCCchhhh------hhc--cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          582 VRLLGFCDEGQNRLLVYEFLNNGTLASF------LFG--NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       582 v~l~g~~~~~~~~~lV~e~~~~gsL~~~------l~~--~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      +++++++.+.+..++||||+++++|.++      +..  ...+++..++.++.||+.||.|||+  ..+|+|+||||+||
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNI  183 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGE
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhE
Confidence            9999999999999999999999999999      665  5678999999999999999999996  15999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCC-CCCC-ccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITA-KVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~-k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      +++.++.+||+|||++......    ......|+..|+|||.+.+. .++. ++||||||+++|||++|+.||.......
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  259 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV  259 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred             EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            9999999999999999876543    13446689999999999877 5666 9999999999999999999997654311


Q ss_pred             hhhhHHHHHHhhccCccccc------ccc---cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          732 YAILTDWAFDCYRNEKLDDL------VEG---DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .  +.    ...........      ..+   .............+.+++.+||+.||.+|||+.|++++
T Consensus       260 ~--~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          260 E--LF----NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             H--HH----HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             H--HH----HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1  11    11111111000      000   00000012345788999999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.7e-35  Score=329.48  Aligned_cols=269  Identities=21%  Similarity=0.261  Sum_probs=201.6

Q ss_pred             CHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc--------cCCcce
Q 045343          512 SYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH--------HKNLVR  583 (813)
Q Consensus       512 ~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~  583 (813)
                      ...++....|.+.++||+|+||+||+|...   .+++.||||+++.. ....+.+.+|+.++++++        |+||++
T Consensus        30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDI---QGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             ehhhhcCCeEEEEEEeeecCCeeEEEEEec---CCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            333444566888899999999999999874   36789999999743 233457889999999986        788999


Q ss_pred             EEeEee----cCCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          584 LLGFCD----EGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       584 l~g~~~----~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                      +++++.    +....++||||+ +++|.+++...  ..+++..++.++.||+.||.|||+.  .+|+||||||+|||++.
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~givHrDikp~NIll~~  182 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSV  182 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECCCCSGGGEEECC
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHeeEec
Confidence            999987    566889999999 45555555433  5689999999999999999999952  28999999999999987


Q ss_pred             CC-------------------------------------------------CEEEeeccCccccccCcccceeecccccc
Q 045343          658 YY-------------------------------------------------NARISDFGLAKLLTLNQSKAIRTAIRGTK  688 (813)
Q Consensus       658 ~~-------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~  688 (813)
                      ++                                                 .+||+|||++......     .....||+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~  257 (397)
T 1wak_A          183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTR  257 (397)
T ss_dssp             CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCG
T ss_pred             cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCC
Confidence            75                                                 7999999999876543     23346899


Q ss_pred             cccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh---hhHHHHHHhhcc-------------------C
Q 045343          689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA---ILTDWAFDCYRN-------------------E  746 (813)
Q Consensus       689 ~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~---~l~~~~~~~~~~-------------------~  746 (813)
                      .|+|||++.+..++.++|||||||++|||++|+.||......+..   ............                   .
T Consensus       258 ~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  337 (397)
T 1wak_A          258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKG  337 (397)
T ss_dssp             GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTS
T ss_pred             cccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcc
Confidence            999999999999999999999999999999999999765432211   001111111100                   0


Q ss_pred             ccccccccc---------ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVEGD---------MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+..+.+..         .......+....+.+|+.+||+.||.+|||+.||+++
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          338 DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             SBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             ccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            000000000         0011234567889999999999999999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=320.82  Aligned_cols=249  Identities=26%  Similarity=0.386  Sum_probs=192.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeec------CC
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE------GQ  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~------~~  592 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||++... ....+++.+|+.++.++ +|+||+++++++..      ..
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHV---KTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             cEEEEEEeccCCCEEEEEEEEC---CCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            3567789999999999999874   35678999998753 33456789999999999 79999999999976      45


Q ss_pred             ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ..++||||+++++|.+++...  ..+++..++.++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence            789999999999999999754  5688999999999999999999964   99999999999999999999999999998


Q ss_pred             ccccCcccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          671 LLTLNQSKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       671 ~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ........  .....|++.|+|||++.     +..++.++||||||+++|||++|+.||..........      .. ..
T Consensus       178 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~-~~  248 (326)
T 2x7f_A          178 QLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF------LI-PR  248 (326)
T ss_dssp             ---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HH-HH
T ss_pred             ecCcCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH------Hh-hc
Confidence            76533211  23456899999999987     5568899999999999999999999997543221110      00 00


Q ss_pred             CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ......        ........+.+++.+||+.||.+||++.+++++
T Consensus       249 ~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          249 NPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             SCCCCC--------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CccccC--------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            111111        111235678899999999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=9.2e-36  Score=328.86  Aligned_cols=258  Identities=24%  Similarity=0.291  Sum_probs=189.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  592 (813)
                      .|.+.+.||+|+||.||+|...   ..+..||||++....  ....+.+.+|+.++++++||||+++++++....     
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDA---ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             heeEeeeeEecCCEEEEEEEEC---CCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            4667789999999999999874   367889999987532  223456889999999999999999999997654     


Q ss_pred             -ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          593 -NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                       ..++||||+++ +|.+++.  ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             cceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence             67999999975 7877775  3578999999999999999999964   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc-------
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR-------  744 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-------  744 (813)
                      ......   .....||+.|+|||++.+..++.++||||||+++|||++|+.||..........   .+.....       
T Consensus       177 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~  250 (371)
T 2xrw_A          177 AGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN---KVIEQLGTPCPEFM  250 (371)
T ss_dssp             ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHC-CCCCCHHHH
T ss_pred             cccccc---cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCCHHHH
Confidence            653321   234578999999999999999999999999999999999999997654321110   0000000       


Q ss_pred             ------------c-C-----cccccccccc---cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 ------------N-E-----KLDDLVEGDM---EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ------------~-~-----~~~~~~~~~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                                  . .     ..........   ...........+.+|+.+||+.||.+|||++|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                        0 0     0000000000   000012336788999999999999999999999975

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.5e-35  Score=325.66  Aligned_cols=266  Identities=21%  Similarity=0.232  Sum_probs=186.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCc-----
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN-----  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----  593 (813)
                      ..+.+.+.||+|+||.||+|...   .++..||||++... ......+.+|++.+..++|+||+++++++.....     
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEK---STGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             TTEEEC----------CEEEEET---TTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             cceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            44667789999999999999874   35789999998653 2334456777888888999999999999865433     


Q ss_pred             --eEEEEeecCCCchh---hhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeecc
Q 045343          594 --RLLVYEFLNNGTLA---SFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFG  667 (813)
Q Consensus       594 --~~lV~e~~~~gsL~---~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfG  667 (813)
                        .++||||++++.+.   .++.....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++. ++.+||+|||
T Consensus        99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A           99 IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             eeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence              78999999875333   2334556788999999999999999999943 459999999999999996 8999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH-------
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA-------  739 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-------  739 (813)
                      +++.......   .....||+.|+|||++.+. .++.++||||||+++|||++|+.||...............       
T Consensus       178 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          178 SAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             TCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            9987664332   2345689999999998665 4899999999999999999999999865432211110000       


Q ss_pred             -HHhhccCcc-ccccc-c-----cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          740 -FDCYRNEKL-DDLVE-G-----DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       740 -~~~~~~~~~-~~~~~-~-----~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......... ....+ .     .............+.+|+.+||+.||.+|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence             000000000 00000 0     00001112346789999999999999999999999976

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.4e-36  Score=321.64  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=193.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccc--cCCcceEEeEeecCCce
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTH--HKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~  594 (813)
                      ..|.+.+.||+|+||.||++...    ++..||||++....  ....+.+.+|+.++.+++  |+||+++++++.+++..
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT----TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC----CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            34677889999999999999763    47789999986432  223467899999999997  59999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||| +.+++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+|||+++ +.+||+|||+++....
T Consensus       104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP  178 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred             EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence            99999 67889999999888899999999999999999999964   9999999999999975 7999999999987765


Q ss_pred             CcccceeecccccccccCcccccC-----------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhh
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-----------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      ...........|++.|+|||.+.+           ..++.++||||||+++|||++|+.||......... +    ....
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~----~~~~  253 (313)
T 3cek_A          179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-L----HAII  253 (313)
T ss_dssp             -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-H----HHHH
T ss_pred             ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH-H----HHHH
Confidence            433322344568999999999875           46788999999999999999999999754322111 0    1111


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQML  793 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L  793 (813)
                      ..         ...........+.+.+++.+||+.||.+||++.|++++-
T Consensus       254 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          254 DP---------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             CT---------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             hc---------ccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            11         111011111246788999999999999999999999753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1e-35  Score=332.56  Aligned_cols=266  Identities=21%  Similarity=0.318  Sum_probs=182.6

Q ss_pred             hhc-ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee--cCCceEEE
Q 045343          521 DNF-KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD--EGQNRLLV  597 (813)
Q Consensus       521 ~~~-~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~~lV  597 (813)
                      +++ .++||+|+||+||+|..... ..+..||||+++..  .....+.+|+.++++++||||+++++++.  .....++|
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~-~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDG-KDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSS-SCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccC-CCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            444 45899999999999987432 35678999998643  33457889999999999999999999994  46688999


Q ss_pred             EeecCCCchhhhhhcc---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE----cCCCCEEEe
Q 045343          598 YEFLNNGTLASFLFGN---------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL----DDYYNARIS  664 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll----~~~~~~kl~  664 (813)
                      |||+.+ +|.+++...         ..+++..++.++.||+.||.|||+.   +|+||||||+||||    +.++.+||+
T Consensus        99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A           99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            999874 777777422         2488999999999999999999964   99999999999999    678899999


Q ss_pred             eccCccccccCccc-ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchh------hhhhH
Q 045343          665 DFGLAKLLTLNQSK-AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE------YAILT  736 (813)
Q Consensus       665 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~------~~~l~  736 (813)
                      |||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......      .....
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l  254 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL  254 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence            99999876543221 113346789999999999874 58999999999999999999999997543311      00011


Q ss_pred             HHHHHhhcc---Ccccccc-------------cccccc--------cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          737 DWAFDCYRN---EKLDDLV-------------EGDMEA--------LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       737 ~~~~~~~~~---~~~~~~~-------------~~~~~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+...+..   .....+.             ......        .........+.+|+.+||+.||.+|||+.|++++
T Consensus       255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            111111110   0000000             000000        0000114567899999999999999999999986


Q ss_pred             H
Q 045343          793 L  793 (813)
Q Consensus       793 L  793 (813)
                      =
T Consensus       335 p  335 (405)
T 3rgf_A          335 P  335 (405)
T ss_dssp             G
T ss_pred             h
Confidence            3

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=5.1e-35  Score=316.83  Aligned_cols=261  Identities=25%  Similarity=0.338  Sum_probs=199.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc---ccCCcceEEeEee-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT---HHKNLVRLLGFCD-----  589 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~-----  589 (813)
                      .|.+.+.||+|+||.||+|....  .+++.||||+++....  .....+.+|+.+++++   +||||+++++++.     
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLK--NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             ceeeeeeecccccEEEEEEEecC--CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            46678899999999999998732  3568899999865332  2234677888888777   8999999999986     


Q ss_pred             cCCceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      .....++||||+. |+|.+++...  ..+++..++.++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg  165 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG  165 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCc
Confidence            5567899999998 6999998764  3489999999999999999999964   99999999999999999999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc--
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN--  745 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--  745 (813)
                      +++.......   .....||..|+|||.+.+..++.++||||||+++|||++|+.||.........   .........  
T Consensus       166 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~  239 (326)
T 1blx_A          166 LARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL---GKILDVIGLPG  239 (326)
T ss_dssp             SCCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCC
T ss_pred             ccccccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHcCCCC
Confidence            9987653321   23456899999999999989999999999999999999999999765432211   111111100  


Q ss_pred             -Ccccc-------ccc---ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 -EKLDD-------LVE---GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 -~~~~~-------~~~---~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       .....       ...   ..............+.+++.+||+.||.+|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence             00000       000   000000112345778899999999999999999999964

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.9e-35  Score=325.63  Aligned_cols=262  Identities=21%  Similarity=0.289  Sum_probs=198.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecC-----Cc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----QN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  593 (813)
                      .|.+.+.||+|+||.||+|...   .++..||||++..... ...+.+.+|++++.+++|+||+++++++...     ..
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDN---LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             cEEEEEEeecCCCeEEEEEEEC---CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            4677899999999999999874   4678899999874322 2235688999999999999999999998654     36


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+. ++|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       105 ~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            899999997 589988865 4589999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccc-eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC---cc
Q 045343          674 LNQSKA-IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE---KL  748 (813)
Q Consensus       674 ~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~~  748 (813)
                      ...... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....   ........   .+
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~~  256 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH---ILGILGSPSQEDL  256 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHH---HHHHHCSCCHHHH
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHH---HHHHhCCCCHHHH
Confidence            443221 1234579999999998754 4589999999999999999999999976543322111   11100000   00


Q ss_pred             ccc------------cccc-cc-ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDL------------VEGD-ME-ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~------------~~~~-~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+            .... .. ..........+.+++.+||+.||.+|||+.|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000            0000 00 00001234678899999999999999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.1e-35  Score=326.07  Aligned_cols=256  Identities=23%  Similarity=0.291  Sum_probs=193.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCce---
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR---  594 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~---  594 (813)
                      .|.+.+.||+|+||.||+|...   .+++.||||++.....  ...+++.+|+.++++++|+||+++++++...+..   
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDK---RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             cEEEEeEEecCCCeEEEEEEEC---CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            4567789999999999999874   4678999999975322  2245688999999999999999999999877655   


Q ss_pred             ---EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          595 ---LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       595 ---~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                         ++||||+. ++|.+++..  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH  193 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred             eeEEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence               99999997 688887743  489999999999999999999965   999999999999999999999999999986


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cc
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EK  747 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~  747 (813)
                      ....     .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....   .......   +.
T Consensus       194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---i~~~~~~~~~~~  265 (371)
T 4exu_A          194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ---ILKVTGVPGTEF  265 (371)
T ss_dssp             -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCHHH
T ss_pred             cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCCCcHHH
Confidence            5432     234568999999999987 6789999999999999999999999976543221110   0000000   00


Q ss_pred             ccc------------ccccccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          748 LDD------------LVEGDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       748 ~~~------------~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...            +......  ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            000            0000000  00011235788999999999999999999999976

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=5.3e-35  Score=310.87  Aligned_cols=256  Identities=25%  Similarity=0.316  Sum_probs=204.6

Q ss_pred             HHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecC
Q 045343          514 KELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG  591 (813)
Q Consensus       514 ~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~  591 (813)
                      .+.....|.+.+.||+|+||.||+|...   .+++.||||++.....  ...+.+.+|++++++++||||+++++++.+.
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~---~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDR---ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS   93 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEc---CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC
Confidence            3445567888999999999999999874   3567899999865432  3345788999999999999999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC---CCEEEeeccC
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY---YNARISDFGL  668 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~---~~~kl~DfGl  668 (813)
                      ...++|+||+++++|.+++.....+++..++.++.||+.||.|||+.   +|+|+||||+||+++.+   +.+||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~  170 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL  170 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred             CeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence            99999999999999999998888899999999999999999999964   99999999999999754   4799999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      +........   .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.........   .    ....+..
T Consensus       171 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~----~~~~~~~  239 (287)
T 2wei_A          171 STCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---K----RVETGKY  239 (287)
T ss_dssp             GGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H----HHHHCCC
T ss_pred             ceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH---H----HHHcCCC
Confidence            987654322   223458899999999876 4889999999999999999999999754332111   1    1111111


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..      ........+..+.+++.+||+.||.+|||+.|++++
T Consensus       240 ~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          240 AF------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CC------CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CC------CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            00      000011235678899999999999999999999973

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.5e-35  Score=323.43  Aligned_cols=200  Identities=27%  Similarity=0.336  Sum_probs=169.1

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cC-----CcceEEeEeecCC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HK-----NLVRLLGFCDEGQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~  592 (813)
                      ..|.+.+.||+|+||+||+|...   .+++.||||+++.. .....++..|+.+++.++ |+     +|+++++++...+
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDR---VEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeEEEEEEEeecCCEEEEEEEEc---CCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            45677889999999999999874   36788999999743 223456777888888775 44     4999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--CCCCEEEeeccC
Q 045343          593 NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--DYYNARISDFGL  668 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--~~~~~kl~DfGl  668 (813)
                      ..++||||+. ++|.+++...  ..+++..++.++.||+.||.|||.+ ..+|+||||||+|||++  .++.+||+|||+
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            9999999996 5999998765  4689999999999999999999953 46899999999999994  578899999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMG  729 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~  729 (813)
                      ++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  263 (382)
T 2vx3_A          208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE  263 (382)
T ss_dssp             CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9876432     2345689999999999999999999999999999999999999986543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.6e-35  Score=325.83  Aligned_cols=257  Identities=23%  Similarity=0.278  Sum_probs=188.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccccc-----------chhhhheeeeeeccccCCcceEEeEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-----------EKEFKNEVVVIGQTHHKNLVRLLGFCD  589 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~g~~~  589 (813)
                      |.+.+.||+|+||.||+|...    .+..||||++.......           .+.+.+|+.++++++||||+++++++.
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           24 YTVQRFISSGSYGAVCAGVDS----EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             CEEEEEEEEETTEEEEEEECT----TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             eEEeEEeccCCCEEEEEEECC----CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            556789999999999999763    47889999986532221           256889999999999999999999984


Q ss_pred             c-----CCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          590 E-----GQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       590 ~-----~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      .     ....++||||+. |+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||
T Consensus       100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl  175 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITI  175 (362)
T ss_dssp             ECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred             eccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEE
Confidence            3     335799999998 5777777654 4789999999999999999999965   9999999999999999999999


Q ss_pred             eeccCccccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      +|||+++.......   .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+...   .....
T Consensus       176 ~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~i~~~  249 (362)
T 3pg1_A          176 CDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN---KIVEV  249 (362)
T ss_dssp             CCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHH
T ss_pred             EecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHH
Confidence            99999986543322   234568999999999877 678999999999999999999999997654322111   01111


Q ss_pred             hcc-------------------CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRN-------------------EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...                   ........... ..........+.+++.+||+.||.+|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW-TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCH-HHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cCCCChHHhhhccchhhhHHHHhhcccCChhhH-HhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            000                   00000000000 00111235678899999999999999999999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=320.39  Aligned_cols=262  Identities=22%  Similarity=0.279  Sum_probs=191.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEee----------
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCD----------  589 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~----------  589 (813)
                      .|.+.+.||+|+||.||+|...   ..++.||||++........+++.+|+.++++++||||+++++++.          
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDN---DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TEEEEEECC-----CEEEEEET---TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             ceeEEEEeccCCCeEEEEEEEC---CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            4567789999999999999874   357899999987655555677899999999999999999999873          


Q ss_pred             ----cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEe
Q 045343          590 ----EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARIS  664 (813)
Q Consensus       590 ----~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~  664 (813)
                          +....++||||++ |+|.+++.. ..+++..++.++.||++||+|||+.   +|+||||||+|||++ +++.+||+
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~  163 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG  163 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence                3457899999998 699998864 4688999999999999999999964   999999999999997 56799999


Q ss_pred             eccCccccccCccc-ceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHh
Q 045343          665 DFGLAKLLTLNQSK-AIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC  742 (813)
Q Consensus       665 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~  742 (813)
                      |||+++........ .......++..|+|||.+.. ..++.++||||||+++|||++|+.||......+....   ....
T Consensus       164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---~~~~  240 (320)
T 2i6l_A          164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL---ILES  240 (320)
T ss_dssp             CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHH
T ss_pred             cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHh
Confidence            99999876533221 11233457899999998865 6789999999999999999999999986543221110   0000


Q ss_pred             hcc---C-------ccccccccccc------ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          743 YRN---E-------KLDDLVEGDME------ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       743 ~~~---~-------~~~~~~~~~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ...   +       .+.........      ..........+.+++.+||+.||.+|||+.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            000   0       00000000000      00011235778999999999999999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-35  Score=317.70  Aligned_cols=249  Identities=25%  Similarity=0.370  Sum_probs=192.9

Q ss_pred             CCHHHHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc------ccchhhhheeeeeecc----ccCC
Q 045343          511 FSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ------DGEKEFKNEVVVIGQT----HHKN  580 (813)
Q Consensus       511 ~~~~el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l----~h~n  580 (813)
                      ....+.....|.+.+.||+|+||.||+|...   .+++.||||+++....      .....+.+|+.++.++    +|+|
T Consensus        23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~   99 (312)
T 2iwi_A           23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRL---TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPG   99 (312)
T ss_dssp             ----------CEEEEEEEEETTEEEEEEECT---TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSS
T ss_pred             ccchhhhhhceEEeeEEEcCCCEEEEEEEEc---cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCC
Confidence            3344566677889999999999999999763   3677999999865322      1234567788888888    8999


Q ss_pred             cceEEeEeecCCceEEEEee-cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CC
Q 045343          581 LVRLLGFCDEGQNRLLVYEF-LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DY  658 (813)
Q Consensus       581 iv~l~g~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~  658 (813)
                      |+++++++.+.+..++|+|+ +.+++|.+++.....+++..++.++.||++||.|||+.   +|+||||||+||+++ .+
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~  176 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR  176 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence            99999999999999999999 78999999998888899999999999999999999965   999999999999999 88


Q ss_pred             CCEEEeeccCccccccCcccceeecccccccccCcccccCCCCC-CccchhhHHHHHHHHHhCCcCCCcccchhhhhhHH
Q 045343          659 YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT-AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD  737 (813)
Q Consensus       659 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~  737 (813)
                      +.+||+|||+++......    .....|+..|+|||++.+..+. .++||||||+++|||++|+.||.....     .  
T Consensus       177 ~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~--  245 (312)
T 2iwi_A          177 GCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I--  245 (312)
T ss_dssp             TEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H--
T ss_pred             CeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H--
Confidence            999999999998765432    2345689999999998776654 589999999999999999999964211     0  


Q ss_pred             HHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          738 WAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ..    ...        .  ........+.+++.+||+.||++|||+.|++++
T Consensus       246 --~~----~~~--------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 --LE----AEL--------H--FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             --HH----TCC--------C--CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             --hh----hcc--------C--CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              00    000        0  011234678899999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8e-35  Score=318.89  Aligned_cols=263  Identities=23%  Similarity=0.310  Sum_probs=199.3

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC------cceEEeEeecC
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN------LVRLLGFCDEG  591 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~  591 (813)
                      ...|.+.+.||+|+||.||+|.....  .+..||||+++.. ....+.+.+|+.++++++|++      ++.+.+++...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~--~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHAR--GKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT--TTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCC--CceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            34677889999999999999987422  3478999998753 233456888999999998766      89999999999


Q ss_pred             CceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE--------------
Q 045343          592 QNRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL--------------  655 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll--------------  655 (813)
                      ...++||||+ +++|.+++...  ..+++..++.++.||+.||+|||+   .+|+||||||+|||+              
T Consensus        95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccc
Confidence            9999999999 55666666543  468999999999999999999995   599999999999999              


Q ss_pred             -----cCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccch
Q 045343          656 -----DDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGE  730 (813)
Q Consensus       656 -----~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~  730 (813)
                           +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  245 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR  245 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence                 66889999999999865432     23456899999999999999999999999999999999999999865443


Q ss_pred             hhhhhHHHHHHhhcc-----Ccccc-ccccc---------------------ccccccHHHHHHHHHHHHHhcccCCCCC
Q 045343          731 EYAILTDWAFDCYRN-----EKLDD-LVEGD---------------------MEALNDIKCVEKLVMVSIWCIQEDPSLR  783 (813)
Q Consensus       731 ~~~~l~~~~~~~~~~-----~~~~~-~~~~~---------------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~R  783 (813)
                      +..............     ..... .....                     ............+.+|+.+||+.||.+|
T Consensus       246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence            221111111000000     00000 00000                     0001122446789999999999999999


Q ss_pred             CCHHHHHHH
Q 045343          784 PTMKKVLQM  792 (813)
Q Consensus       784 Pt~~evl~~  792 (813)
                      ||+.|++++
T Consensus       326 pt~~e~l~h  334 (355)
T 2eu9_A          326 ITLAEALLH  334 (355)
T ss_dssp             CCHHHHTTS
T ss_pred             cCHHHHhcC
Confidence            999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.9e-35  Score=318.13  Aligned_cols=242  Identities=24%  Similarity=0.423  Sum_probs=199.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccc--cCCcceEEeEee
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTH--HKNLVRLLGFCD  589 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~  589 (813)
                      ...|.+.+.||+|+||.||+|...   .+++.||||+++.....      ..+.+.+|+.++++++  |+||+++++++.
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRV---SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEET---TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             cCceEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            345778899999999999999874   46789999999754322      2356788999999996  599999999999


Q ss_pred             cCCceEEEEeecCC-CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeecc
Q 045343          590 EGQNRLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFG  667 (813)
Q Consensus       590 ~~~~~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfG  667 (813)
                      +.+..++|+|++.+ ++|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++ +++.+||+|||
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg  195 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG  195 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence            99999999999986 89999998888899999999999999999999964   999999999999999 78999999999


Q ss_pred             CccccccCcccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccC
Q 045343          668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNE  746 (813)
Q Consensus       668 la~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  746 (813)
                      +++......    .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......            ... 
T Consensus       196 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------------~~~-  258 (320)
T 3a99_A          196 SGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------------IRG-  258 (320)
T ss_dssp             TCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------HHC-
T ss_pred             ccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------------hcc-
Confidence            998765432    234568999999999987665 67899999999999999999999643110            000 


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..  ..        .....+.+.+++.+||+.||.+|||+.||+++
T Consensus       259 ~~--~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          259 QV--FF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             CC--CC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cc--cc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00  00        11234678899999999999999999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6.7e-35  Score=319.80  Aligned_cols=255  Identities=24%  Similarity=0.293  Sum_probs=193.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCc----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN----  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~----  593 (813)
                      .|.+.+.||+|+||.||+|...   .++..||||++.....  ...+++.+|+.++++++||||+++++++.....    
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDK---RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             eEEEeeeEecCCCeEEEEEEEC---CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            3567789999999999999874   4678999999865322  224568899999999999999999999977654    


Q ss_pred             --eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          594 --RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       594 --~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                        .++||||+. ++|.+++..  .+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH  175 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred             eeEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence              499999997 688888754  488999999999999999999965   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc-----
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-----  745 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-----  745 (813)
                      ....     .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+...   ........     
T Consensus       176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~  247 (353)
T 3coi_A          176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT---QILKVTGVPGTEF  247 (353)
T ss_dssp             -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHH---HHHHHHCBCCHHH
T ss_pred             CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCCHHH
Confidence            5432     234568999999999877 678999999999999999999999997654322111   00000000     


Q ss_pred             ------C-------cccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 ------E-------KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ------~-------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .       .+......... .........+.+++.+||+.||.+|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          248 VQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HTTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                  0       00000000000 0112346788999999999999999999999975

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=5.6e-35  Score=320.23  Aligned_cols=261  Identities=21%  Similarity=0.290  Sum_probs=196.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecC-----Cc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-----QN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-----~~  593 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||+++.... ....++.+|+.++++++|+||+++++++...     ..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHK---PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             ceEEeeEEcCCCCeEEEEEEEC---CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            4667789999999999999874   3578999999864322 2245678999999999999999999988654     67


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .++|+||+. ++|.+++.. ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        89 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            899999997 689988865 4689999999999999999999964   99999999999999999999999999998765


Q ss_pred             cCcccc--------eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhc
Q 045343          674 LNQSKA--------IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       674 ~~~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ......        ......||+.|+|||++.. ..++.++||||||+++|||++|+.||...........   ......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~  240 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL---IFGIIG  240 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH---HHHHhC
Confidence            332111        0123468999999998764 6789999999999999999999999976543221111   111110


Q ss_pred             cC----cccccc---------------cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NE----KLDDLV---------------EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~----~~~~~~---------------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..    ....+.               ...+. .........+.+++.+||+.||.+|||+.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLE-KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHH-HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchh-hhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00    000000               00000 0011345678899999999999999999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=7.6e-35  Score=311.53  Aligned_cols=252  Identities=27%  Similarity=0.377  Sum_probs=190.4

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec--------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--------  590 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--------  590 (813)
                      ..+++.+.||+|+||.||+|...   .+++.||||++... ....+.+.+|+.++++++||||+++++++.+        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNA---LDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred             ccchhhheeccCCcEEEEEEEEc---CCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence            45677899999999999999874   36789999998653 3345678899999999999999999998854        


Q ss_pred             -----CCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEe
Q 045343          591 -----GQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       591 -----~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~  664 (813)
                           ....++||||+++++|.+++... ..+++..++.++.||++||+|||+.   +|+|+||||+|||++.++.+||+
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence                 34679999999999999999754 4678899999999999999999965   99999999999999999999999


Q ss_pred             eccCccccccCcc------------cceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchh
Q 045343          665 DFGLAKLLTLNQS------------KAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE  731 (813)
Q Consensus       665 DfGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~  731 (813)
                      |||++........            ........|++.|+|||.+.+. .++.++||||||+++|||++   |+...... 
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-  234 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-  234 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH-
Confidence            9999987643210            1112345689999999999765 68999999999999999998   44322111 


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ....    .......      ..............+.+++.+||+.||.+|||+.|++++
T Consensus       235 -~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          235 -VNIL----KKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             -HHHH----HHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -HHHH----Hhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence             1111    1111100      011111122345678899999999999999999999975

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=5.8e-35  Score=316.72  Aligned_cols=249  Identities=24%  Similarity=0.357  Sum_probs=174.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheee-eeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVV-VIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||+++.... ....++..|+. +++.++||||+++++++.+.+..++|
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHK---PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEET---TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhehheeccCCCEEEEEEEEc---CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            3456788999999999999874   3578999999975422 22334555555 77788999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          598 YEFLNNGTLASFLFG-----NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      |||+++ +|.+++..     ...+++..+..++.|+++||.|||+.  .+|+||||||+|||++.++.+||+|||+++..
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            999985 78777753     56789999999999999999999952  38999999999999999999999999999876


Q ss_pred             ccCcccceeecccccccccCcccc----cCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWF----RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l----~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      .....   .....||+.|+|||++    .+..++.++||||||+++|||++|+.||........              .+
T Consensus       177 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------------~~  239 (327)
T 3aln_A          177 VDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--------------QL  239 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------------
T ss_pred             ccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--------------HH
Confidence            54322   2234689999999998    456789999999999999999999999974322100              00


Q ss_pred             ccccc---ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          749 DDLVE---GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       749 ~~~~~---~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ..+..   +.+...........+.+++.+||+.||.+|||+.||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            11111   11111111234578899999999999999999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=9.4e-35  Score=320.94  Aligned_cols=271  Identities=20%  Similarity=0.294  Sum_probs=201.0

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-----------cCCcceE
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-----------HKNLVRL  584 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l  584 (813)
                      +....|.+.+.||+|+||.||+|...   .+++.||||++... ....+.+.+|+.++++++           |+||+++
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~   91 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDM---VNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   91 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEec---CCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence            34456788899999999999999874   46789999998743 223456788998888886           8999999


Q ss_pred             EeEeecCC----ceEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--
Q 045343          585 LGFCDEGQ----NRLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--  656 (813)
Q Consensus       585 ~g~~~~~~----~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--  656 (813)
                      ++++....    ..++||||+ +++|.+++...  ..+++..++.++.||+.||+|||+.  .+|+||||||+|||++  
T Consensus        92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~  168 (373)
T 1q8y_A           92 LDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIV  168 (373)
T ss_dssp             CEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEE
T ss_pred             HHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEecc
Confidence            99987544    689999999 89999999753  4589999999999999999999952  2899999999999994  


Q ss_pred             ----CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh
Q 045343          657 ----DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY  732 (813)
Q Consensus       657 ----~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~  732 (813)
                          ..+.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus       169 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  243 (373)
T 1q8y_A          169 DSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY  243 (373)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence                4457999999999876533     2334689999999999999999999999999999999999999975542111


Q ss_pred             ----hhhHHHHHHhhcc-------------------Cccccccccc---------ccccccHHHHHHHHHHHHHhcccCC
Q 045343          733 ----AILTDWAFDCYRN-------------------EKLDDLVEGD---------MEALNDIKCVEKLVMVSIWCIQEDP  780 (813)
Q Consensus       733 ----~~l~~~~~~~~~~-------------------~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~Cl~~dP  780 (813)
                          ..+.. .......                   +....+....         ..........+.+.+|+.+||+.||
T Consensus       244 ~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  322 (373)
T 1q8y_A          244 TKDDDHIAQ-IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP  322 (373)
T ss_dssp             -CHHHHHHH-HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred             CChHHHHHH-HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCc
Confidence                11111 1110000                   0000000000         0011234567889999999999999


Q ss_pred             CCCCCHHHHHHH--HhcCcCC
Q 045343          781 SLRPTMKKVLQM--LEGVVEV  799 (813)
Q Consensus       781 ~~RPt~~evl~~--L~~~~~~  799 (813)
                      .+|||+.||+++  +.+....
T Consensus       323 ~~Rpt~~ell~hp~f~~~~~~  343 (373)
T 1q8y_A          323 RKRADAGGLVNHPWLKDTLGM  343 (373)
T ss_dssp             TTCBCHHHHHTCGGGTTCTTC
T ss_pred             cccCCHHHHhhChhhhcccCc
Confidence            999999999984  4544433

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=3.4e-34  Score=293.93  Aligned_cols=211  Identities=21%  Similarity=0.255  Sum_probs=159.6

Q ss_pred             ccCCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEE
Q 045343           25 QNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKL  104 (813)
Q Consensus        25 ~~~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~  104 (813)
                      ++.|+|.+|++|++++   +|  ++|.|+|||+.++    .     +.+ |..   +|+||+|||+.   |  .++.|+|
T Consensus         6 ~~~~~i~~g~~L~~g~---~l--~~g~f~l~f~~~g----n-----l~l-y~~---~~~vW~an~~~---~--~~~~l~l   62 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQ---SL--ELSSFRFTMQSDC----N-----LVL-FDS---DVRVWASNTAG---A--TGCRAVL   62 (236)
T ss_dssp             CSSSSSCSCSCCCTTC---EE--CSTTEEEEECTTS----C-----EEE-EES---SSEEECCCCCS---C--SCCBCCB
T ss_pred             eccceeCCCCEECCCC---EE--EcCCEEEEECCCC----c-----EEE-EEC---CEEEEECCCCC---C--CCeEEEE
Confidence            4569999999999998   78  4999999998654    1     223 443   79999999983   3  5778999


Q ss_pred             eeCccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccccccCcCcc----------cCCCccccc-c
Q 045343          105 TADHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTL----------LPGQTMETK-Q  172 (813)
Q Consensus       105 ~~~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTl----------Lpg~~l~~~-~  172 (813)
                      +.||||||+|++|++||+|++... +..+|+|+|+|||||++.   ++||||||||||+          +||||++.+ +
T Consensus        63 ~~dGnLvl~d~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~  139 (236)
T 1dlp_A           63 QSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQ  139 (236)
T ss_dssp             CSSSCBCCBCTTTCCSCCCCCCCCSSCCEEEECSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCC
T ss_pred             cCCCcEEEEcCCCcEEEeCCccccCCcEEEEEeCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccc
Confidence            999999999999999999998643 345899999999999954   8999999998665          677766543 4


Q ss_pred             ceeecCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccCCCCCCCCceEEEeccCccEEEEecCCceeEe
Q 045343          173 GLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDL  252 (813)
Q Consensus       173 ~L~S~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (813)
                      +|+|   .+||++|.|++.++++|++.++  +..     ..||++++|...    ......++.++.++++..++..+..
T Consensus       140 ~L~s---~~d~s~G~~~l~l~~dG~LvL~--~~~-----~~~W~s~~~~~~----~~~~~~L~~~Gnl~ly~~~~~~vw~  205 (236)
T 1dlp_A          140 TLHA---TQSLQLSPYRLSMETDCNLVLF--DRD-----DRVWSTNTAGKG----TGCRAVLQPNGRMDVLTNQNIAVWT  205 (236)
T ss_dssp             EECS---SCCCBCSSCEEEEETTTEEEEE--BTT-----BCCSCCCCCSSC----SSCEEEEETTTEEEEEETTTEEEEE
T ss_pred             eEEc---CcEeecCcEEEEECCCCcEEEE--cCC-----EeEEeCCCcCCC----CceEEEECCCCcEEEEeCCCcEEEE
Confidence            6774   7899999999999999976554  322     479999988532    2234456677777777655554444


Q ss_pred             ecccccCCcceEEEEEEeeCceeEEE
Q 045343          253 TTESVVPAADFYYRATLNFDGVFAQY  278 (813)
Q Consensus       253 ~~~~~~~~~~~~~r~~L~~dG~l~~y  278 (813)
                      +....  . ...+|++|+.||++++|
T Consensus       206 s~~~~--~-~~~~rl~Ld~dG~l~ly  228 (236)
T 1dlp_A          206 SGNSR--S-AGRYVFVLQPDRNLAIY  228 (236)
T ss_dssp             CCCCC--S-SSCCEEEECSSSCEEEE
T ss_pred             eCCCC--C-CCCEEEEEcCCCcEEEe
Confidence            43221  1 23579999999999998

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.8e-34  Score=325.01  Aligned_cols=246  Identities=28%  Similarity=0.332  Sum_probs=183.7

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEeec
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      ..+.||+|+||+||.+..    .+++.||||++...   ..+.+.+|+.++.++ +||||+++++++.+++..++||||+
T Consensus        19 ~~~~LG~G~~g~V~~~~~----~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGS----FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             EEEEEEECSTTCEEEEEE----SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCeEeeCCCeEEEEEEE----ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            357899999999986543    26789999998643   234678899999876 8999999999999999999999999


Q ss_pred             CCCchhhhhhccCCC-------CHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCC-------------CCE
Q 045343          602 NNGTLASFLFGNLKP-------SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDY-------------YNA  661 (813)
Q Consensus       602 ~~gsL~~~l~~~~~l-------~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~-------------~~~  661 (813)
                      . |+|.+++......       ++..++.++.||+.||+|||+.   +|+||||||+|||++.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence            5 6999999765322       3345678999999999999964   99999999999999754             489


Q ss_pred             EEeeccCccccccCcccc--eeecccccccccCcccccC-------CCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          662 RISDFGLAKLLTLNQSKA--IRTAIRGTKGYVAPEWFRN-------STITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~-------~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      ||+|||+++.........  ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            999999999876543221  1234579999999999975       568899999999999999999 999997543322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      ...    ......   .     +.............+.+++.+||+.||.+|||+.||++
T Consensus       248 ~~i----~~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 SNI----IRGIFS---L-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHH----HHTCCC---C-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH----hcCCCC---c-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            111    111101   0     11111223456788999999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.7e-34  Score=314.25  Aligned_cols=250  Identities=20%  Similarity=0.216  Sum_probs=169.6

Q ss_pred             Hhhcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec----CCce
Q 045343          520 TDNFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----GQNR  594 (813)
Q Consensus       520 ~~~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~  594 (813)
                      .|.+. +.||+|+||.||+|...   .+++.||||++....    +...+....+..++|+||+++++++..    +...
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHR---RTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEEC---CCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            35564 46999999999999874   357899999986521    112222233556789999999999865    4458


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLA  669 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla  669 (813)
                      ++||||+++|+|.+++...  ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            9999999999999999765  3689999999999999999999965   9999999999999976   455999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +......    .....+|+.|+|||++.+..++.++||||||+++|||++|+.||...........   ........   
T Consensus       179 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~---  248 (336)
T 3fhr_A          179 KETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG---MKRRIRLG---  248 (336)
T ss_dssp             EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred             eeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh---HHHhhhcc---
Confidence            8655322    2345689999999999888899999999999999999999999975433211000   00000000   


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                         ............+..+.+++.+||+.||.+|||+.|++++
T Consensus       249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence               0000111112345778999999999999999999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=5.3e-34  Score=307.58  Aligned_cols=251  Identities=21%  Similarity=0.321  Sum_probs=176.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-c-chhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-G-EKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.+.||+|+||.||+|...   .+++.||||++...... . .+.+.++..+++.++|+||+++++++.+.+..++|
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFR---KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             GEEEEEEC------CEEEEEET---TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cccccceeeecCCeeEEEEEEe---cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            4566789999999999999874   35779999999754221 1 22344455567788999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+ ++.+..+... ...+++..++.++.||++||.|||+.  .+|+|+||||+||+++.++.+||+|||++.......
T Consensus       103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence            9999 4555555443 46789999999999999999999951  289999999999999999999999999997765432


Q ss_pred             ccceeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      .   .....+++.|+|||++.     ...++.++||||||+++|||++|+.||........ .+    ...... ....+
T Consensus       180 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~----~~~~~~-~~~~~  250 (318)
T 2dyl_A          180 A---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VL----TKVLQE-EPPLL  250 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HH----HHHHHS-CCCCC
T ss_pred             c---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-HH----HHHhcc-CCCCC
Confidence            2   23456899999999994     45688899999999999999999999975332211 11    011111 00000


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                           .  ........+.+++.+||+.||.+||++.|++++
T Consensus       251 -----~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          251 -----P--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             -----C--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -----C--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                 0  011235678899999999999999999999863

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.9e-34  Score=318.26  Aligned_cols=246  Identities=26%  Similarity=0.323  Sum_probs=183.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +.+.+.||+|+||+|+....    .+++.||||++...   ....+.+|+.+++++ +|||||++++++.+....++|||
T Consensus        26 y~~~~~LG~G~~G~V~~~~~----~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           26 FCPKDVLGHGAEGTIVYRGM----FDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEECGGGCEEEEEE----SSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EecCCeeecCcCEEEEEEEE----eCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            45568899999999654332    26788999998642   234577899999998 79999999999999999999999


Q ss_pred             ecCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-----CCCEEEeeccCccccc
Q 045343          600 FLNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-----YYNARISDFGLAKLLT  673 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~DfGla~~~~  673 (813)
                      |+. |+|.+++.... ...+..++.++.||++||.|||+.   +|+||||||+|||++.     ...+||+|||+++...
T Consensus        99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            996 69999997653 455667789999999999999964   9999999999999953     3468899999998775


Q ss_pred             cCccc-ceeecccccccccCccccc---CCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          674 LNQSK-AIRTAIRGTKGYVAPEWFR---NSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       674 ~~~~~-~~~~~~~gt~~y~aPE~l~---~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      ..... .......||+.|+|||++.   ...++.++|||||||++|||++ |..||..........       .......
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-------~~~~~~~  247 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-------LLGACSL  247 (432)
T ss_dssp             -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-------HTTCCCC
T ss_pred             CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-------HhccCCc
Confidence            43221 1134467999999999997   4567889999999999999999 999986433221110       1111111


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      .. ..      ........+.+++.+||+.||.+|||+.||++
T Consensus       248 ~~-~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          248 DC-LH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TT-SC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cc-cC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            10 00      11234566889999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.7e-34  Score=337.64  Aligned_cols=244  Identities=21%  Similarity=0.284  Sum_probs=192.9

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      ++....|.+.+.||+|+||.||+|.....  +++.||||++.... ......+.+|+.++.+++||||+++++++.+.+.
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  153 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNV--NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR  153 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGG--TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCC--CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC
Confidence            33445678889999999999999987521  46889999986432 2234568899999999999999999999987665


Q ss_pred             -----eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          594 -----RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       594 -----~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                           .+|||||+++++|.+++..  .+++..++.++.||++||.|||+.   +|+||||||+|||++.+ .+||+|||+
T Consensus       154 ~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          154 HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence                 6999999999999998765  689999999999999999999964   99999999999999986 999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      ++.....      ....||++|+|||++.+.. +.++||||||++++||++|..|+......                  
T Consensus       228 a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------------  282 (681)
T 2pzi_A          228 VSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------------  282 (681)
T ss_dssp             CEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------------
T ss_pred             chhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------------
Confidence            9876532      3356999999999987654 88999999999999999998887532110                  


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcC
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGV  796 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~  796 (813)
                       .+..    ..........+.+++.+||+.||.+|| +++++.+.|.++
T Consensus       283 -~~~~----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          283 -GLPE----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             -SCCT----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             -cccc----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence             0000    001122346788999999999999999 566666666654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=4.9e-34  Score=330.92  Aligned_cols=272  Identities=24%  Similarity=0.278  Sum_probs=200.7

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeec------C
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE------G  591 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~  591 (813)
                      ..|.+.++||+|+||.||+|...   .++..||||+++.. .....+.+.+|+.++++++||||+++++++..      +
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~---~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~   90 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQ---DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN   90 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCT---TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred             CCeEEEEEEeeCCCeEEEEEEEC---CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence            56888899999999999998763   46788999998653 22334568899999999999999999999765      6


Q ss_pred             CceEEEEeecCCCchhhhhhccC---CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCC---EEEee
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNL---KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYN---ARISD  665 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~---~kl~D  665 (813)
                      +..++||||+++|+|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||+++.++.   +||+|
T Consensus        91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D  167 (676)
T 3qa8_A           91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID  167 (676)
T ss_dssp             SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred             CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence            67899999999999999997643   588999999999999999999964   9999999999999997665   99999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhh--hhH-HHHHHh
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA--ILT-DWAFDC  742 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~--~l~-~~~~~~  742 (813)
                      ||++........   .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  .+. ......
T Consensus       168 FG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~  244 (676)
T 3qa8_A          168 LGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHI  244 (676)
T ss_dssp             CCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------C
T ss_pred             cccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhh
Confidence            999987654332   23457999999999999999999999999999999999999999754221100  000 000000


Q ss_pred             hccCccccc--ccccc--cccccHHHHHHHHHHHHHhcccCCCCCCCHHH-----HHHHHhcCcCC
Q 045343          743 YRNEKLDDL--VEGDM--EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK-----VLQMLEGVVEV  799 (813)
Q Consensus       743 ~~~~~~~~~--~~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e-----vl~~L~~~~~~  799 (813)
                      .........  .....  ........+..+.+++.+||+.||.+|||+.|     ..+.++.+++.
T Consensus       245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~  310 (676)
T 3qa8_A          245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL  310 (676)
T ss_dssp             CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred             hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence            000000000  00000  11123346788999999999999999999977     44555554443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3e-33  Score=297.09  Aligned_cols=234  Identities=13%  Similarity=0.061  Sum_probs=183.3

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~  592 (813)
                      +....|.+.+.||+|+||.||+|...   ..++.||||++......   ..+++.+|+.++.+++|+||+++++++.+.+
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  104 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDT---ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA  104 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEET---TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEec---CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence            33445788899999999999999874   35789999999754322   2367899999999999999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++||||+++++|.+++...  .......+++.||++||.|||+.   +|+||||||+|||++.++.+||++++     
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-----  174 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-----  174 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred             cEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----
Confidence            999999999999999999653  35557888999999999999965   99999999999999999999997443     


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                                       |++       .++.++||||||+++|||++|+.||..........            ......
T Consensus       175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~  218 (286)
T 3uqc_A          175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------------PAERDT  218 (286)
T ss_dssp             -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------------ECCBCT
T ss_pred             -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------------HHHHHh
Confidence                             333       36889999999999999999999997654321000            000000


Q ss_pred             ccccc--ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          753 EGDME--ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       753 ~~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      .....  .......++.+.+++.+||+.||.+| |+.|+++.|+++...
T Consensus       219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            00000  00112345678999999999999999 999999999886654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=3.9e-32  Score=290.57  Aligned_cols=232  Identities=21%  Similarity=0.276  Sum_probs=177.8

Q ss_pred             hhcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeee-eccccCCcceEEeEeec----CCce
Q 045343          521 DNFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVI-GQTHHKNLVRLLGFCDE----GQNR  594 (813)
Q Consensus       521 ~~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~----~~~~  594 (813)
                      |.+. +.||+|+||.||++...   .+++.||||+++.     ...+.+|+.++ +..+|+||+++++++..    ....
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNK---RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             hhhcCcccccCCCeEEEEEEEc---CCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            4444 67999999999999874   3578999999864     34567788887 55689999999999876    6678


Q ss_pred             EEEEeecCCCchhhhhhccC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccCc
Q 045343          595 LLVYEFLNNGTLASFLFGNL--KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGLA  669 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGla  669 (813)
                      ++||||+++|+|.+++....  .+++..++.++.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            99999999999999997653  689999999999999999999964   9999999999999998   789999999998


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      ....                        +..++.++||||||+++|||++|+.||.........           .....
T Consensus       168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~~  212 (299)
T 3m2w_A          168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMKT  212 (299)
T ss_dssp             EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCC
T ss_pred             cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHHH
Confidence            6533                        134577899999999999999999999754321100           00001


Q ss_pred             cccccccccc--ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcC
Q 045343          750 DLVEGDMEAL--NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVE  798 (813)
Q Consensus       750 ~~~~~~~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~  798 (813)
                      .+........  ........+.+++.+||+.||.+|||+.|++++  +.+...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            1111111100  012345788999999999999999999999974  444433

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=5.5e-33  Score=302.40  Aligned_cols=246  Identities=16%  Similarity=0.149  Sum_probs=184.1

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--------ccchhhhheeeeeeccc---------c
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--------DGEKEFKNEVVVIGQTH---------H  578 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---------h  578 (813)
                      +....|.+.++||+|+||+||+|..     +++.||||+++....        ...+.+.+|+.++++++         |
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h   91 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA-----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRT   91 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE-----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBC
T ss_pred             cccccchheeeecccCceEEEEEEe-----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccC
Confidence            3456788899999999999999986     468999999975422        12266888999988886         7


Q ss_pred             CCcceEEeEe-----------------e-------------cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHH
Q 045343          579 KNLVRLLGFC-----------------D-------------EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI  628 (813)
Q Consensus       579 ~niv~l~g~~-----------------~-------------~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i  628 (813)
                      +|||++.+.+                 .             +....++||||+++|++.+.+.. ..+++..++.++.||
T Consensus        92 ~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           92 EGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQL  170 (336)
T ss_dssp             CCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHH
T ss_pred             CchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHH
Confidence            7777776653                 2             26789999999999977666644 567999999999999


Q ss_pred             HHHHHHhh-hcCCCCeeeCCCCCCcEEEcCCC--------------------CEEEeeccCccccccCcccceeeccccc
Q 045343          629 ARGLLYLH-EDCSAQIIHCDIKPQNILLDDYY--------------------NARISDFGLAKLLTLNQSKAIRTAIRGT  687 (813)
Q Consensus       629 a~gl~yLH-~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt  687 (813)
                      +.||+||| +.   +|+||||||+|||++.++                    .+||+|||+|+.....       ...||
T Consensus       171 ~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt  240 (336)
T 2vuw_A          171 TASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFC  240 (336)
T ss_dssp             HHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECC
T ss_pred             HHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEe
Confidence            99999999 65   999999999999999887                    8999999999876532       24689


Q ss_pred             ccccCcccccCCCCCCccchhhHHHH-HHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHH
Q 045343          688 KGYVAPEWFRNSTITAKVDVYSFGVL-LLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVE  766 (813)
Q Consensus       688 ~~y~aPE~l~~~~~~~k~DVwS~Gvv-l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  766 (813)
                      +.|+|||++.+.. +.++|||||+++ .+++++|..||......  ..+..   .........    ...........++
T Consensus       241 ~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~--~~~~~---~~~~~~~~~----~~~~~~~~~~~s~  310 (336)
T 2vuw_A          241 DVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL--HYLTD---KMLKQMTFK----TKCNTPAMKQIKR  310 (336)
T ss_dssp             CCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH--HHHHH---HHHHTCCCS----SCCCSHHHHHHHH
T ss_pred             ecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh--hHHHH---hhhhhhccC----cccchhhhhhcCH
Confidence            9999999998776 889999998777 77788899887421000  00000   111000000    0011111235678


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHH-HH
Q 045343          767 KLVMVSIWCIQEDPSLRPTMKKVL-QM  792 (813)
Q Consensus       767 ~l~~l~~~Cl~~dP~~RPt~~evl-~~  792 (813)
                      .+.+|+.+||+.|     |+.|++ ++
T Consensus       311 ~~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          311 KIQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             HHHHHHHHHhccC-----CHHHHHhcC
Confidence            8999999999976     999988 53

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=4.4e-32  Score=303.54  Aligned_cols=235  Identities=14%  Similarity=0.097  Sum_probs=173.2

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeecccc-CCcc---------e-----
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHH-KNLV---------R-----  583 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h-~niv---------~-----  583 (813)
                      .+.+.||+|+||.||+|...   .+++.||||+++....   ...+.+.+|+.+++.++| +|..         .     
T Consensus        81 ~~~~~LG~G~fG~Vy~a~~~---~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           81 VRGTVLGQEDPYAYLEATDQ---ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEETTEEEEEEEET---TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             EEecccccCCCEEEEEEEec---CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            34578999999999999874   3577999999873322   235678899999999877 2211         1     


Q ss_pred             -------EEeEeec-----CCceEEEEeecCCCchhhhhhc-------cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 045343          584 -------LLGFCDE-----GQNRLLVYEFLNNGTLASFLFG-------NLKPSWNLRTNIAFQIARGLLYLHEDCSAQII  644 (813)
Q Consensus       584 -------l~g~~~~-----~~~~~lV~e~~~~gsL~~~l~~-------~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~iv  644 (813)
                             +..++..     ....+++|++ .+++|.+++..       ...+++..++.++.||++||+|||+.   +|+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii  233 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV  233 (413)
T ss_dssp             ECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             ccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence                   1111111     1234566665 46899988841       23467889999999999999999954   999


Q ss_pred             eCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccc----------cCCCCCCccchhhHHHHH
Q 045343          645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF----------RNSTITAKVDVYSFGVLL  714 (813)
Q Consensus       645 H~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l----------~~~~~~~k~DVwS~Gvvl  714 (813)
                      ||||||+||||+.++.+||+|||+++.....     .....| +.|+|||++          ....++.++|||||||++
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            9999999999999999999999999875432     234567 999999999          555688899999999999


Q ss_pred             HHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          715 LEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       715 ~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                      |||++|+.||........               ...++...      ...++.+.+++.+||+.||.+||++.+++
T Consensus       308 ~elltg~~Pf~~~~~~~~---------------~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGG---------------SEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSC---------------SGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHHHCCCCCCCcchhhh---------------HHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999999999975432111               11111110      12246789999999999999999976664

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=5.3e-27  Score=271.65  Aligned_cols=185  Identities=19%  Similarity=0.105  Sum_probs=129.8

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----------cccchhhhheeeeeecc-ccCCcceEEeEeecCCce
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----------QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~  594 (813)
                      .++.|++|.+.++...   -.+..++||.+....          +...++|.+|+++|+++ +|+||++++++++++...
T Consensus       241 ~~~~~~~~~h~~~rr~---~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~  317 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRY---FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG  317 (569)
T ss_dssp             C-C--------CCEEE---EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred             ccccCCcccccccccc---cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence            4566666655544322   246678999986431          12235699999999999 799999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ||||||++|++|.++|.....++..   +|+.||+.||+|||+.   +||||||||+||||+.++.+||+|||+|+....
T Consensus       318 yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          318 WLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            9999999999999999988877654   5889999999999965   999999999999999999999999999987754


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK  722 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~  722 (813)
                      +...  ....+||++|+|||++.+. ...++|+|++|++++++.++..
T Consensus       392 ~~~~--~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          392 DCSW--PTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             --CC--SHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             CCcc--ccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence            4332  3456799999999999764 5678999999999988766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=7.2e-24  Score=244.03  Aligned_cols=183  Identities=18%  Similarity=0.256  Sum_probs=143.9

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc--------cchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--------GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .+.||+|+||.||+|..     .+..+++|+.......        ..+++.+|++++++++|+||+++..++...+..+
T Consensus       341 ~~~LG~G~fg~Vy~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             -------CCEEEEEEEC-----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred             CCEEeeCCCEEEEEEEE-----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence            46899999999999954     4567888876432111        1244789999999999999997766666778889


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      |||||+++++|.+++..        +..++.||++||.|||+.   +|+||||||+|||++.  .+||+|||+++.....
T Consensus       416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            99999999999999876        568999999999999964   9999999999999999  9999999999987653


Q ss_pred             cccc-----eeecccccccccCcccccC--CCCCCccchhhHHHHHHHHHhCCcCC
Q 045343          676 QSKA-----IRTAIRGTKGYVAPEWFRN--STITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       676 ~~~~-----~~~~~~gt~~y~aPE~l~~--~~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      ....     ......||+.|+|||++..  ..|+...|+|+..+-.++.+.++.++
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            3211     1235679999999999976  56788899999998888888776655

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.82  E-value=5.4e-20  Score=161.99  Aligned_cols=103  Identities=20%  Similarity=0.382  Sum_probs=87.5

Q ss_pred             CCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeC
Q 045343           28 GTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTAD  107 (813)
Q Consensus        28 ~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~  107 (813)
                      |+|.+||.|.+|+   +|+|  |.|.|.|...|         .|.|+.    ..++||+|||+   .|...++.|+|+.|
T Consensus         2 n~L~~g~~L~~g~---~L~s--g~y~l~~q~Dg---------NLvly~----~~~~vW~ant~---~~~~~~~~L~l~~d   60 (105)
T 4h3o_A            2 NILDNNEGLYAGQ---SLDV--EPYHFIMQDDC---------NLVLYD----HSTSTWASNTE---IGGKSGCSAVLQSD   60 (105)
T ss_dssp             CEECTTEEECTTC---EEEE--TTEEEEECTTS---------CEEEEE----TTEEEEECCCC---CTTCCSCEEEECTT
T ss_pred             CCcCCCCEEcCCC---EEEE--CCEEEEECCCC---------eEEEEE----CCEEEEEecCC---CCCCccEEEEEeCC
Confidence            6899999999999   8988  88999998765         366654    35899999998   44556789999999


Q ss_pred             ccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccc
Q 045343          108 HGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus       108 g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      |||||+|++|++||+|++... +..+|+|+|+|||||++.   .||||
T Consensus        61 GnLvL~d~~~~~vWss~t~~~~~~~~l~L~ddGNlVly~~---~~W~S  105 (105)
T 4h3o_A           61 GNFVVYDSSGRSLWASHSTRGSGNYILILQDDGNVIIYGS---DIWST  105 (105)
T ss_dssp             SCEEEECTTCCEEEECCCCCCSSCEEEEECTTSCEEEEES---EEEEC
T ss_pred             ccEEEECCCcEEEEEecCCCCCCCEEEEEeCCCeEEEECC---cEecC
Confidence            999999999999999998754 346899999999999964   69998

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.82  E-value=8.5e-20  Score=164.65  Aligned_cols=108  Identities=19%  Similarity=0.249  Sum_probs=91.4

Q ss_pred             ccCCCcCCCceeeecCCCceee--cCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEE
Q 045343           25 QNNGTVPVGATLTAGTNSSTWL--SPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQV  102 (813)
Q Consensus        25 ~~~~~~~~~~~l~~~~~~~~lv--S~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l  102 (813)
                      ++.|+|.+|++|.+|+   +|+  |++|.|+|+|+.+|.       .   +||++   +++||+||++.   + +.++.|
T Consensus         6 ~~~~~l~~g~~L~~g~---~l~~~S~~g~~~L~~~~dgn-------l---vly~~---~~~vW~sn~~~---~-~~~~~l   65 (119)
T 1b2p_A            6 SKQPDDNHPQILHATE---SLEILFGTHVYRFIMQTDCN-------L---VLYDN---NNPIWATNTGG---L-GNGCRA   65 (119)
T ss_dssp             CSCSSSCCCCEEETTC---EEEEEETTEEEEEEECTTSC-------E---EEEET---TEEEEECCCTT---S-CSSCEE
T ss_pred             ecCcccCCCCEEcCCC---EEEEeCCCCCEEEEEecCCC-------E---EEEEC---CEEEEeCCCcc---C-CCceEE
Confidence            3568999999999999   999  999999999997651       2   57875   79999999982   2 346789


Q ss_pred             EEeeCccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCccccccc
Q 045343          103 KLTADHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSF  155 (813)
Q Consensus       103 ~~~~~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSF  155 (813)
                      +|+.||||||+|.+|++||+|.+... +...++|+|+|||||++   .++|||=
T Consensus        66 ~l~~dGNLVl~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~---~~~W~Sg  116 (119)
T 1b2p_A           66 VLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWATQ  116 (119)
T ss_dssp             EECTTSCEEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEECC
T ss_pred             EEccCCEEEEEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC---ccEeCCC
Confidence            99999999999999999999997643 45689999999999998   3899983

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.81  E-value=8.8e-20  Score=162.48  Aligned_cols=109  Identities=16%  Similarity=0.324  Sum_probs=91.7

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      +|+|.+|+.|.+|+   +|+ ++|.|+|+|+.+|.         | +||+   .+++||.||++.   + +.++.|+|..
T Consensus         1 ~d~l~~g~~L~~g~---~l~-~~~~~~l~~~~dGn---------l-vl~~---~~~~vW~sn~~~---~-~~~~~l~l~~   59 (110)
T 3a0c_A            1 VNSLSSPNSLFTGH---SLE-VGPSYRLIMQGDCN---------F-VLYD---SGKPVWASNTGG---L-GSGCRLTLHN   59 (110)
T ss_dssp             CCEEETTCEECTTC---EEE-ETTTEEEEECTTSC---------E-EEEE---TTEEEEECCCTT---S-CSSCEEEECT
T ss_pred             CCEeCCCCEECCCC---EEE-ECCCEEEEEcCCCc---------E-EEEE---CCEEEEECCCCC---C-CCcEEEEEeC
Confidence            37899999999999   899 99999999987651         2 5676   379999999973   2 2467899999


Q ss_pred             CccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccccccCc
Q 045343          107 DHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSFSNPS  159 (813)
Q Consensus       107 ~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PT  159 (813)
                      ||||||+|.+|++||+|.+... +...++|+|+|||||++.   .+||||+||.
T Consensus        60 dGNLVl~~~~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~  110 (110)
T 3a0c_A           60 NGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP---VVWATGSGPA  110 (110)
T ss_dssp             TSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEEECSCCC-
T ss_pred             CCCEEEECCCCcEEEecCCCCCCCCEEEEEeCCccEEEECC---CEecCCCcCC
Confidence            9999999999999999998744 345899999999999975   7999999983

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.80  E-value=2e-20  Score=197.31  Aligned_cols=142  Identities=13%  Similarity=0.088  Sum_probs=112.5

Q ss_pred             cccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc------------------ccchhhhheeeeeeccccCCcceE
Q 045343          523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ------------------DGEKEFKNEVVVIGQTHHKNLVRL  584 (813)
Q Consensus       523 ~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l  584 (813)
                      +.+.||+|+||.||+|..    .++..||||.++....                  .....+.+|+.++++++  | +++
T Consensus        94 ~~~~iG~G~~g~Vy~~~~----~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v  166 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS----EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV  166 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE----TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred             ecCEeccCCCceEEEEEe----CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence            558999999999999987    2578999999864221                  12345889999999999  4 566


Q ss_pred             EeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEe
Q 045343          585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARIS  664 (813)
Q Consensus       585 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~  664 (813)
                      .+++.. +..++||||+++++|.+ +..      .....++.||++||.|||+.   +|+||||||+|||++ ++.+||+
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~  234 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWII  234 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEEC
T ss_pred             CeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEE
Confidence            665433 56799999999999998 421      23457999999999999954   999999999999999 9999999


Q ss_pred             eccCccccccCcccceeecccccccccCcccccC
Q 045343          665 DFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRN  698 (813)
Q Consensus       665 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~  698 (813)
                      |||+++..               ..+.|||++..
T Consensus       235 DFG~a~~~---------------~~~~a~e~l~r  253 (282)
T 1zar_A          235 DFPQSVEV---------------GEEGWREILER  253 (282)
T ss_dssp             CCTTCEET---------------TSTTHHHHHHH
T ss_pred             ECCCCeEC---------------CCCCHHHHHHH
Confidence            99998642               34678887743

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.79  E-value=5.2e-19  Score=159.09  Aligned_cols=109  Identities=20%  Similarity=0.346  Sum_probs=90.4

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      .|+|.+||+|.+++   +|+  +|.|+|+|+.+|       +.+   +|+   ..++||+||++.   + ..++.|+|+.
T Consensus         2 ~dtl~~gq~L~~g~---~L~--~g~~~L~~~~dg-------nlv---ly~---~~~~vW~sn~~~---~-~~~~~l~l~~   59 (115)
T 2dpf_A            2 DNVLLSGQTLHADH---SLQ--AGAYTLTIQNKC-------NLV---KYQ---NGRQIWASNTDR---R-GSGCRLTLLS   59 (115)
T ss_dssp             CCEEETTCEEETTE---EEE--ETTEEEEECTTS-------CEE---EEE---TTEEEEECSCTT---S-CSSCEEEECT
T ss_pred             CCEeCCCCEECCCC---EEE--CCCEEEEEcCCC-------cEE---EEe---CCEEEEeCCCCC---C-CCceEEEECC
Confidence            58999999999998   898  799999998654       133   365   379999999983   2 2467899999


Q ss_pred             CccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccccccCcC
Q 045343          107 DHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSD  160 (813)
Q Consensus       107 ~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTD  160 (813)
                      ||||||+|.++++||+|++..+ +..+++|+|+|||||++.   ++||||.+++.
T Consensus        60 ~GnLvl~d~~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~~  111 (115)
T 2dpf_A           60 DGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWSLGPNGCR  111 (115)
T ss_dssp             TSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEECSSTTCBC
T ss_pred             CCcEEEECCCceEEEEcCCCCCCCCEEEEEeCCCeEEEECC---CEEECCCCCCc
Confidence            9999999999999999998643 346899999999999964   89999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.77  E-value=7.1e-19  Score=157.47  Aligned_cols=109  Identities=19%  Similarity=0.423  Sum_probs=91.0

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      +|||.+||.|.+|+   +|  ++|.|+|+|+.+|.       .   +||.+   +++||+||++.   . +.++.|+|..
T Consensus         1 tdtl~~gq~L~~g~---~L--~~~~~~L~~~~dgn-------l---vl~~~---~~~vW~sn~~~---~-~~~~~l~l~~   58 (112)
T 1xd5_A            1 SDRLNSGHQLDTGG---SL--AEGGYLFIIQNDCN-------L---VLYDN---NRAVWASGTNG---K-ASGCVLKMQN   58 (112)
T ss_dssp             CCEEETTEEECTTC---EE--EETTEEEEECTTSC-------E---EEEET---TEEEEECCCTT---S-CSSEEEEECT
T ss_pred             CCCCCCCCEECCCC---EE--eCCCEEEEEcCCCc-------E---EEEEC---CEEEEeCCCcC---C-CCCEEEEEeC
Confidence            48999999999998   88  57999999998751       2   35764   68999999872   1 3467899999


Q ss_pred             CccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccccccC
Q 045343          107 DHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSFSNP  158 (813)
Q Consensus       107 ~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~P  158 (813)
                      ||||||+| ++.+||+|.+... +...++|+++|||||++..+.++||||+|.
T Consensus        59 ~GNLvl~d-~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~~~~~W~S~~~~  110 (112)
T 1xd5_A           59 DGNLVIYS-GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV  110 (112)
T ss_dssp             TSCEEEEE-TTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCC
T ss_pred             CCCEEEEc-CCEEEEECCccCCCCCEEEEEeCCCcEEEECCCCceEEECCCcc
Confidence            99999999 8889999987643 345899999999999997788999999984

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.73  E-value=1.2e-17  Score=148.60  Aligned_cols=103  Identities=20%  Similarity=0.384  Sum_probs=85.3

Q ss_pred             CCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeC
Q 045343           28 GTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTAD  107 (813)
Q Consensus        28 ~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~  107 (813)
                      +||.+||.|.+|+   +|+  +|.|+|+|+.+|       +.+|   |..   .++||++|+..   + +.++.|+|..|
T Consensus         2 ntL~~gq~L~~g~---~L~--~g~~~L~~q~dG-------nLvl---y~~---~~~vW~snt~~---~-~~~~~l~l~~d   59 (109)
T 3dzw_A            2 NILYSGETLSPGE---FLN--NGRYVFIMQEDC-------NLVL---YDV---DKPIWATNTGG---L-DRRCHLSMQSD   59 (109)
T ss_dssp             CEEETTEEECTTC---EEE--ETTEEEEECTTS-------CEEE---EET---TEEEEECCCTT---S-SSSCEEEECTT
T ss_pred             CCcCCCCEeCCCC---EEE--CCCEEEEEcCCC-------cEEE---EeC---CEEEEECCccc---C-CCCEEEEEeCC
Confidence            6899999999998   886  799999998765       1333   654   58999999873   2 34678999999


Q ss_pred             ccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCccccccc
Q 045343          108 HGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSF  155 (813)
Q Consensus       108 g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSF  155 (813)
                      |||||+|.+++++|+|++.... ..+|+|+|+|||||+++   .+|||=
T Consensus        60 GNLvl~~~~~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~---~~W~s~  105 (109)
T 3dzw_A           60 GNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGT---ARWATG  105 (109)
T ss_dssp             SCEEEECTTSCEEEECCCCCSSSCEEEEECTTSCEEEEES---CCCCCC
T ss_pred             CCEEEECCCCCEEEECCCCCCCCCEEEEEeCCCEEEEECC---CEEeCC
Confidence            9999999999999999986544 36899999999999984   799984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.67  E-value=6.7e-17  Score=168.19  Aligned_cols=137  Identities=17%  Similarity=0.138  Sum_probs=104.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceE--EEEEEeeccccc------------------------cchhhhheeeeeec
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRVFQD------------------------GEKEFKNEVVVIGQ  575 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~  575 (813)
                      .+.+.||+|+||.||+|...   .++..  ||||.++.....                        ....+.+|+.++.+
T Consensus        50 ~i~~~ig~G~~g~Vy~a~~~---~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           50 AMGGVISTGKEANVFYADGV---FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             EEEEEEEECSSEEEEEEEEE---ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceEEEEEEEEc---CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            46688999999999999873   25667  999987532111                        01257889999999


Q ss_pred             cccCCc--ceEEeEeecCCceEEEEeecCC-C----chhhhhhccCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeeCC
Q 045343          576 THHKNL--VRLLGFCDEGQNRLLVYEFLNN-G----TLASFLFGNLKPSWNLRTNIAFQIARGLLYLH-EDCSAQIIHCD  647 (813)
Q Consensus       576 l~h~ni--v~l~g~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH-~~~~~~ivH~d  647 (813)
                      ++|+++  +.++.+    ...+|||||+.+ |    +|.++...   .++.....++.||+.+|.||| +.   +|+|||
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrD  196 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHAD  196 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence            998864  445543    367899999942 4    56655432   235577889999999999999 64   999999


Q ss_pred             CCCCcEEEcCCCCEEEeeccCccccc
Q 045343          648 IKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       648 lk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      |||+|||++.  .++|+|||+|....
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999998  99999999997643

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.66  E-value=1.7e-16  Score=140.93  Aligned_cols=104  Identities=16%  Similarity=0.221  Sum_probs=83.9

Q ss_pred             ccCCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEE
Q 045343           25 QNNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKL  104 (813)
Q Consensus        25 ~~~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~  104 (813)
                      .++|+|.+||.|..|+   +|+|  |.|.|-|...|         .|.| |..    ++||.+|+..    .+.++.|+|
T Consensus         4 ~~~dtL~~gq~L~~g~---~L~s--g~~~L~~q~dG---------nLvl-~~~----~~vW~snt~~----~~~~~~l~l   60 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGDG---RLTA--KNHQLVMQGDC---------NLVL-YGG----KYGWQSNTHG----NGEHCFLRL   60 (110)
T ss_dssp             CBTTEEETTCEEETTE---EEEC--SSCEEEECTTS---------CEEE-ECS----SSCEECCCTT----SSSSCEEEE
T ss_pred             cccCEECCCCEecCCC---EEEe--CCEEEEEcCCC---------eEEE-ECC----eEEEECCCcC----CCcCEEEEE
Confidence            3679999999999998   8998  56999776543         1444 653    4899999873    234578999


Q ss_pred             eeCccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccc
Q 045343          105 TADHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus       105 ~~~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      +.||||||+|.+|.++|++++... +..+|+|+|+|||||++   ..+|+|
T Consensus        61 ~~dGNLvl~d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~---~~~W~t  108 (110)
T 3r0e_B           61 NHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG---PAIFET  108 (110)
T ss_dssp             CTTSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             eCCCcEEEEeCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec---CCEecC
Confidence            999999999999999999998643 33689999999999998   479987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.63  E-value=1.3e-15  Score=136.04  Aligned_cols=106  Identities=13%  Similarity=0.160  Sum_probs=85.9

Q ss_pred             cCCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEe
Q 045343           26 NNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLT  105 (813)
Q Consensus        26 ~~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~  105 (813)
                      +.|+|.+||.|.+++   .|.+  |.|.|-|...|         .|.++..  ...++||.+|+..   + +.++.|.|.
T Consensus         5 ~~~tL~~gq~L~~g~---~L~~--g~~~L~~q~dG---------NLvL~~~--~~~~~vWssnt~~---~-~~~~~l~l~   64 (113)
T 3mez_B            5 VRNVLFSSQVMYDNA---QLAT--RDYSLVMRDDC---------NLVLTKG--SKTNIVWESGTSG---R-GQHCFMRLG   64 (113)
T ss_dssp             CSSEEETTCEEETTC---EEEE--TTEEEEECTTS---------CEEEEET--TTTEEEEECCCTT---S-CSSCEEEEC
T ss_pred             cCCEeCCCCEECCCC---EeEc--CCEEEEEcCCC---------EEEEEEC--CCCEEEEECCccc---C-CcCEEEEEe
Confidence            468999999999998   8864  89999997654         2555432  1368999999873   1 245789999


Q ss_pred             eCccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccc
Q 045343          106 ADHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus       106 ~~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      .||||||+|.+|+++|+|++... +..+|+|+|+|||||++   ..+|+|
T Consensus        65 ~dGNLVl~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~---~~~W~s  111 (113)
T 3mez_B           65 HSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYG---PAVWST  111 (113)
T ss_dssp             TTSCEEEECTTSCEEEECSCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             CCCcEEEECCCCCEEEECCCcCCCCCEEEEEcCCceEEEec---CCEecC
Confidence            99999999999999999998643 33689999999999997   689987

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.62  E-value=7.9e-16  Score=136.87  Aligned_cols=88  Identities=23%  Similarity=0.368  Sum_probs=74.5

Q ss_pred             CceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceee
Q 045343           98 RGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFS  176 (813)
Q Consensus        98 ~~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S  176 (813)
                      ...+|.|+.||||||++ .+++||++++...+ ..+++|+|+|||||++.++.++||||.                    
T Consensus        20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t--------------------   78 (110)
T 3a0c_A           20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKT--------------------   78 (110)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCC--------------------
T ss_pred             CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCC--------------------
Confidence            35789999999999998 58999999986543 368999999999999998999999993                    


Q ss_pred             cCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecccc
Q 045343          177 RKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTY  220 (813)
Q Consensus       177 ~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (813)
                           ++++|.|++.++++|+++++.         ..||+++++
T Consensus        79 -----~~~~g~~~l~l~~dGnlvl~~---------~~~W~S~~~  108 (110)
T 3a0c_A           79 -----NGKEDHYVLVLQQDRNVVIYG---------PVVWATGSG  108 (110)
T ss_dssp             -----CCSSSCCEEEECTTSCEEEEC---------SEEEECSCC
T ss_pred             -----CCCCCCEEEEEeCCccEEEEC---------CCEecCCCc
Confidence                 457899999999999977752         169998765

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.61  E-value=1.6e-15  Score=135.67  Aligned_cols=92  Identities=28%  Similarity=0.393  Sum_probs=76.5

Q ss_pred             CceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceee
Q 045343           98 RGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFS  176 (813)
Q Consensus        98 ~~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S  176 (813)
                      ...+|.|+.||||+|++. +++||++++...+ ..+|+|+++|||||++ ++.++||||+                    
T Consensus        19 ~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~--------------------   76 (112)
T 1xd5_A           19 GGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNT--------------------   76 (112)
T ss_dssp             TTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCC--------------------
T ss_pred             CCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCc--------------------
Confidence            357899999999999987 7899999986433 4689999999999999 7889999994                    


Q ss_pred             cCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccCC
Q 045343          177 RKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDP  222 (813)
Q Consensus       177 ~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (813)
                           +|++|.|++.++++|+++++.. .     ...||++++|.+
T Consensus        77 -----~~~~g~~~l~l~~dGnlvl~~~-~-----~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 -----NRQNGNYYLILQRDRNVVIYDN-S-----NNAIWATHTNVG  111 (112)
T ss_dssp             -----CCSCCCCEEEECTTSCEEEECT-T-----SCEEEECCCCCC
T ss_pred             -----cCCCCCEEEEEeCCCcEEEECC-C-----CceEEECCCccC
Confidence                 4567999999999999777531 1     258999999864

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.60  E-value=1.8e-15  Score=136.28  Aligned_cols=86  Identities=21%  Similarity=0.317  Sum_probs=73.5

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      ..+|.|..||||+|++. +++||++++...+ ...|+|+|+|||||++.+++++||||                      
T Consensus        31 ~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~----------------------   87 (119)
T 1b2p_A           31 VYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP----------------------   87 (119)
T ss_dssp             EEEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECS----------------------
T ss_pred             CEEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCC----------------------
Confidence            46799999999999987 8999999986543 36899999999999999899999999                      


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccc
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT  219 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  219 (813)
                         +||++|.|++.++++|+++++.         ..||++++
T Consensus        88 ---~~~~~g~~~l~l~~~Gnlvl~~---------~~~W~Sg~  117 (119)
T 1b2p_A           88 ---VAGKAGHYVLVLQPDRNVVIYG---------DALWATQT  117 (119)
T ss_dssp             ---CCCCSSCEEEEECTTSCEEEEE---------SEEEECCC
T ss_pred             ---CCCCCCCEEEEEECCCcEEEEC---------ccEeCCCC
Confidence               3567899999999999977653         26999876

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.57  E-value=5.2e-15  Score=131.15  Aligned_cols=107  Identities=21%  Similarity=0.379  Sum_probs=84.9

Q ss_pred             cCCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEe
Q 045343           26 NNGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLT  105 (813)
Q Consensus        26 ~~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~  105 (813)
                      +.|||.+||.|.+|+   +|  .+|.|.|.|...|.         |-+ |..      +|.+|+..   . +.++.|+|+
T Consensus         2 ~~dtL~~gq~L~~g~---~L--~~g~~~L~~q~dGN---------Lvl-~~~------~Wssnt~~---~-~~~~~l~l~   56 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEG---HL--KNGDFDLVMQDDCN---------LVL-YNG------NWQSNTAN---N-GRDCKLTLT   56 (109)
T ss_dssp             CCSEEETTCEECTTC---EE--EETTEEEEECTTSC---------EEE-ETT------TEECCCTT---S-CSSCEEEEC
T ss_pred             ccCCcCCCCCcCCCC---Ee--ECCCEEEEEecCCe---------EEE-EeC------eEEcCCCC---C-CCcEEEEEc
Confidence            569999999999998   78  57999999976541         222 432      69998772   1 346789999


Q ss_pred             eCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCC
Q 045343          106 ADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPG  165 (813)
Q Consensus       106 ~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg  165 (813)
                      .||||||+|.+++++|+|++.... ..+|+|+|+|||||++   ..+|+|     .|.+||
T Consensus        57 ~dGnLvl~d~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~---~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           57 DYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG---PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TTSCEEEECTTSCEEEECCCCCSSSCCEEEEETTTEEEEEC---SEEEEE-----CTTSCC
T ss_pred             CCCeEEEEeCCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe---cCEECC-----CCccCC
Confidence            999999999999999999986433 4589999999999997   679997     555554

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.55  E-value=8.1e-15  Score=131.59  Aligned_cols=89  Identities=21%  Similarity=0.359  Sum_probs=75.7

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      ...|.|+.||||+|++ .+++||++++.... ...++|+++|||||++.++.++|||||+                    
T Consensus        21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~--------------------   79 (115)
T 2dpf_A           21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACW--------------------   79 (115)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCC--------------------
T ss_pred             CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCC--------------------
Confidence            4679999999999998 57899999986543 3689999999999999888999999997                    


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccCC
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDP  222 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (813)
                           +++|.|++.++++|+++++.         ..||++++|..
T Consensus        80 -----~~~g~~~l~l~~dGnlvl~~---------~~~W~S~~~~~  110 (115)
T 2dpf_A           80 -----GDNGKYALVLQKDGRFVIYG---------PVLWSLGPNGC  110 (115)
T ss_dssp             -----CSSSCCEEEECTTSCEEEEC---------SEEECSSTTCB
T ss_pred             -----CCCCCEEEEEeCCCeEEEEC---------CCEEECCCCCC
Confidence                 36789999999999977752         16999999964

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.47  E-value=1.1e-14  Score=157.69  Aligned_cols=140  Identities=11%  Similarity=0.023  Sum_probs=94.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-----cchhh---------hheeeeeeccccCCcceEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-----GEKEF---------KNEVVVIGQTHHKNLVRLLG  586 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-----~~~~~---------~~E~~~l~~l~h~niv~l~g  586 (813)
                      |.+.++||+|++|.||+|...    +++.||||+++.....     ...++         ..+.++.....|+||++++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~----~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~  172 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE----KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE  172 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT----TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECC----CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            567789999999999999763    6789999987632110     00011         11111111223444444332


Q ss_pred             Eee------cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-
Q 045343          587 FCD------EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-  659 (813)
Q Consensus       587 ~~~------~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-  659 (813)
                      ...      .....+|||||+++++|..+..      ......++.||+.+|.|||+.   +||||||||.|||+++++ 
T Consensus       173 ~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          173 EGFPVPEPIAQSRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             TTCSCCCEEEEETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred             cCCCCCeeeeccCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence            111      1123479999999999876543      223456889999999999965   999999999999998776 


Q ss_pred             ---------CEEEeeccCccccc
Q 045343          660 ---------NARISDFGLAKLLT  673 (813)
Q Consensus       660 ---------~~kl~DfGla~~~~  673 (813)
                               .+.|+||+-+....
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCEETT
T ss_pred             cccccccccceEEEEeCCcccCC
Confidence                     38999999886543

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.45  E-value=1.4e-13  Score=122.30  Aligned_cols=102  Identities=11%  Similarity=0.231  Sum_probs=80.2

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      +|+|.+||.|.+|+   .|  .+|.|.|.|...|         -|.+ |..   .. ||.+|+..+    +.+..|.|..
T Consensus         2 ~~~l~~gq~L~~g~---~L--~~g~~~L~~q~dG---------nLvl-~~~---~~-vW~snt~~~----~~~~~l~l~~   58 (111)
T 3mez_A            2 NNVLLTGDVIHTDN---QL--SYESAAFVMQGDC---------NLVL-YNE---AG-GFQSNTHGR----GVDCTLRLNN   58 (111)
T ss_dssp             TTEEETTCEECTTC---EE--EETTEEEEECTTS---------CEEE-ECS---SC-CEECCCTTS----CSSCEEEECT
T ss_pred             cCEeCCCCEeCCCC---EE--ecCCEEEEEccCC---------eEEE-ECC---CC-EEECCcccC----CcCEEEEEcC
Confidence            58899999999998   78  4799999997654         1333 542   23 999998732    3357899999


Q ss_pred             CccEEEeCCCCC-EEeeeccCC---CceeEEEEecCcCEEEEecCCcccccc
Q 045343          107 DHGLVLNDPQGK-QVWSSEIDI---GTVAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus       107 ~g~l~l~~~~~~-~~wst~~~~---~~~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      ||||||+|.++. +||+|++..   .+..+++|+++|||||++   ..+|+|
T Consensus        59 dGNLVl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~---~~~W~s  107 (111)
T 3mez_A           59 RGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG---PAIWST  107 (111)
T ss_dssp             TSCEEEECSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC---SEEEEC
T ss_pred             CCcEEEEeCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec---cCEEcc
Confidence            999999998876 599999632   234689999999999997   679987

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.31  E-value=5.2e-12  Score=112.15  Aligned_cols=87  Identities=21%  Similarity=0.291  Sum_probs=70.3

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCce-eEEEEecCcCEEEEecCCc-ccccccccCcCcccCCCccccccceee
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGTV-AVGHMNDTGNFVLASSSSS-KLWDSFSNPSDTLLPGQTMETKQGLFS  176 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~~-~~~~l~d~Gnlvl~~~~~~-~~WqSFD~PTDTlLpg~~l~~~~~L~S  176 (813)
                      ...|.++.||||||++.++  +|++++...+. ..++|+++|||||++.+++ ++|||.-+                   
T Consensus        21 ~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~-------------------   79 (111)
T 3mez_A           21 SAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS-------------------   79 (111)
T ss_dssp             TEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS-------------------
T ss_pred             CEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-------------------
Confidence            5789999999999999876  99999875433 6899999999999998776 49998731                   


Q ss_pred             cCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccc
Q 045343          177 RKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT  219 (813)
Q Consensus       177 ~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  219 (813)
                          .....|.|.+.+++||+++++.         .++|.+++
T Consensus        80 ----~~~~~~~~~l~Lq~dGNlvly~---------~~~W~s~t  109 (111)
T 3mez_A           80 ----VNTVRGNYAATLGPDQHVTIYG---------PAIWSTPA  109 (111)
T ss_dssp             ----CCCCSSCCEEEECTTSCEEEEC---------SEEEECCC
T ss_pred             ----cCCCCcCEEEEECCCCeEEEec---------cCEEccCC
Confidence                1114578999999999999984         46888765

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.29  E-value=7.2e-12  Score=111.70  Aligned_cols=88  Identities=17%  Similarity=0.249  Sum_probs=70.9

Q ss_pred             CceEEEEeeCccEEEeCC-CCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCcccccccee
Q 045343           98 RGSQVKLTADHGLVLNDP-QGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLF  175 (813)
Q Consensus        98 ~~~~l~~~~~g~l~l~~~-~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~  175 (813)
                      ...+|.++.||||||++. .++++|++++...+ ...++|+++|||||++.+++++|||=.+-                 
T Consensus        24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~-----------------   86 (113)
T 3mez_B           24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVG-----------------   86 (113)
T ss_dssp             TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCC-----------------
T ss_pred             CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcC-----------------
Confidence            457899999999999998 48999999987543 46899999999999998889999974310                 


Q ss_pred             ecCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccc
Q 045343          176 SRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT  219 (813)
Q Consensus       176 S~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  219 (813)
                              ..|.|.+.+++||+++++.         ...|.+++
T Consensus        87 --------~~~~~~~~L~~dGnlvly~---------~~~W~s~~  113 (113)
T 3mez_B           87 --------QEGDYVLILQINGQAVVYG---------PAVWSTAA  113 (113)
T ss_dssp             --------SSSCCEEEECTTSCEEEEC---------SEEEESCC
T ss_pred             --------CCCCEEEEEcCCceEEEec---------CCEecCCC
Confidence                    1356899999999999873         35787653

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.26  E-value=1.2e-11  Score=109.62  Aligned_cols=86  Identities=27%  Similarity=0.381  Sum_probs=69.4

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      ...|.|+.||||||++. +++||++++...+ ...++|+++|||||++.++.++|||..+.                   
T Consensus        20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~-------------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG-------------------   79 (109)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC-------------------
T ss_pred             CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC-------------------
Confidence            47799999999999987 7899999986543 36899999999999998889999986421                   


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccc
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT  219 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  219 (813)
                            ..+.|.+.++++|+++++.         .+.|.+++
T Consensus        80 ------~~~~~~~~L~ddGNlvly~---------~~~W~s~t  106 (109)
T 3dzw_A           80 ------ENGNYVCVLQKDRNVVIYG---------TARWATGT  106 (109)
T ss_dssp             ------SSSCEEEEECTTSCEEEEE---------SCCCCCCC
T ss_pred             ------CCCCEEEEEeCCCEEEEEC---------CCEEeCCC
Confidence                  2256889999999999874         24676654

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.25  E-value=1.8e-11  Score=126.98  Aligned_cols=115  Identities=15%  Similarity=0.271  Sum_probs=86.7

Q ss_pred             ccCCCcCCCce----eeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCce
Q 045343           25 QNNGTVPVGAT----LTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGS  100 (813)
Q Consensus        25 ~~~~~~~~~~~----l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~  100 (813)
                      ..+||+.||+.    |..|+   .|+|+ ..++.|+|...-.. .. ..+  + |.+  ..+++|.+++.++   .  ..
T Consensus       134 ~ptdtlLpg~~~~~~l~~g~---~L~S~-~dps~G~fsl~l~~-dG-nlv--L-y~~--~~~~yW~Sgt~~~---~--~~  197 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPGS---ELVQG-VVYGAGASKLVFQG-DG-NLV--A-YGP--NGAATWNAGTQGK---G--AV  197 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSSE---EECTT-CEEEETTEEEEECT-TS-CEE--E-ECT--TSSEEEECCCTTT---T--CC
T ss_pred             ccccccccccccccccccCc---ccccC-CCCCCceEEEeecC-Cc-eEE--E-EeC--CCeEEEECCCCCC---c--cE
Confidence            35699999999    87776   78654 56777777653111 12 233  3 432  2589999988732   1  26


Q ss_pred             EEEEeeCccEEEeCCCCCEEeeeccCCCceeEEEEecCcCEEEEecCCccccccccc
Q 045343          101 QVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSN  157 (813)
Q Consensus       101 ~l~~~~~g~l~l~~~~~~~~wst~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~  157 (813)
                      .|.++.||+|+++|.++.++|++++......+|+|+++|||||++.  +.+||||||
T Consensus       198 ~l~l~~dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~  252 (276)
T 3m7h_A          198 RAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--KPVWARFGF  252 (276)
T ss_dssp             EEEECTTSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred             EEEEcCCCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence            8999999999999998899999998755557899999999999986  689999997

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.20  E-value=3.2e-11  Score=106.85  Aligned_cols=84  Identities=23%  Similarity=0.354  Sum_probs=67.7

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCce-eEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGTV-AVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~~-~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      ...|.|+.||||||++.  +++|++++...+. ..++|+++|||||++.++.++|||-.+-                   
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~-------------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS-------------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC-------------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC-------------------
Confidence            46799999999999986  6899999875433 5899999999999998889999986411                   


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecc
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG  218 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  218 (813)
                            ..|.|.+.+++||+++++.         ...|.++
T Consensus        84 ------~~~~~~~~L~~dGNlvly~---------~~~W~t~  109 (110)
T 3r0e_B           84 ------KQGEYVLILQDDGFGVIYG---------PAIFETS  109 (110)
T ss_dssp             ------SSSCCEEEECTTSCEEEEC---------SEEEESC
T ss_pred             ------CCCCEEEEEcCCccEEEec---------CCEecCC
Confidence                  2345889999999999874         2567765

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.10  E-value=2.9e-10  Score=115.91  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=65.2

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeecC
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRK  178 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~~  178 (813)
                      .-.|.|..||||+|++. +++||++++.......++|+++|||||+|.++++||+|+++                     
T Consensus        27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~---------------------   84 (236)
T 1dlp_A           27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTK---------------------   84 (236)
T ss_dssp             TEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCC---------------------
T ss_pred             CEEEEECCCCcEEEEEC-CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCcc---------------------
Confidence            46788889999999986 78999999875555689999999999999999999999975                     


Q ss_pred             CCCCCCCCceeEEeccCCcceec
Q 045343          179 SETNFSRGRFQFRLLKDGNLVLN  201 (813)
Q Consensus       179 s~~dps~G~~~~~~~~~g~~~~~  201 (813)
                          .++|.|.+.++++|+++++
T Consensus        85 ----~~~~~~~~~l~d~Gnlvl~  103 (236)
T 1dlp_A           85 ----GSIGNYVLVLQPDRTVTIY  103 (236)
T ss_dssp             ----CCSSCCEEEECSSSCEEEE
T ss_pred             ----ccCCcEEEEEeCCCCEEEe
Confidence                1346788999999998886

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.08  E-value=2.8e-10  Score=100.56  Aligned_cols=85  Identities=20%  Similarity=0.312  Sum_probs=68.8

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      ...|.|+.||||||+++    +|+|++...+ ...++|+++|||||++.++.++|+|-.+                    
T Consensus        22 ~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~t~--------------------   77 (109)
T 3r0e_A           22 DFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQ--------------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECCCC--------------------
T ss_pred             CEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCCCc--------------------
Confidence            57899999999999984    8999987543 3689999999999999888999975210                    


Q ss_pred             CCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccC
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYD  221 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (813)
                           ...+.|.+.+++||+++++.         .+.|.+++|.
T Consensus        78 -----~~~~~~~~~L~~dGNlvly~---------~~~W~s~t~~  107 (109)
T 3r0e_A           78 -----SVKGNYAAVVHPDGRLVVFG---------PSVFKIDPWV  107 (109)
T ss_dssp             -----CSSSCCEEEEETTTEEEEEC---------SEEEEECTTS
T ss_pred             -----CCCcCEEEEEcCCCeEEEEe---------cCEECCCCcc
Confidence                 12367889999999999874         3689998874

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.05  E-value=4.4e-10  Score=98.49  Aligned_cols=77  Identities=31%  Similarity=0.560  Sum_probs=63.2

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCC--ceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceee
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIG--TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFS  176 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~--~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S  176 (813)
                      .-+|.+..||||||++ .+++||++++...  ....+.|+++|||||+|.+++++|+|-.                    
T Consensus        20 ~y~l~~q~DgNLvly~-~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t--------------------   78 (105)
T 4h3o_A           20 PYHFIMQDDCNLVLYD-HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHS--------------------   78 (105)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCC--------------------
T ss_pred             CEEEEECCCCeEEEEE-CCEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecC--------------------
Confidence            3579999999999998 4589999998643  3468999999999999999999998621                    


Q ss_pred             cCCCCCCCCCceeEEeccCCcceec
Q 045343          177 RKSETNFSRGRFQFRLLKDGNLVLN  201 (813)
Q Consensus       177 ~~s~~dps~G~~~~~~~~~g~~~~~  201 (813)
                           ....+.|.+.|+++|+++++
T Consensus        79 -----~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 -----TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             -----CCCSSCEEEEECTTSCEEEE
T ss_pred             -----CCCCCCEEEEEeCCCeEEEE
Confidence                 11456789999999999987

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.03  E-value=5.1e-10  Score=116.25  Aligned_cols=141  Identities=15%  Similarity=0.041  Sum_probs=109.8

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      +.+...++.|+.+.||+...     .+..+++|............+.+|..+++.+. |..+.++++++.+....++|||
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~-----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             ceeEeeccCCCCCeEEEEEC-----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            44566788888899999864     35689999986532233457899999999884 6778899999988888999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED-----------------------------------------  638 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----------------------------------------  638 (813)
                      |++|.+|.+.+.     +......++.+++++|..||..                                         
T Consensus        91 ~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (263)
T 3tm0_A           91 EADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK  165 (263)
T ss_dssp             CCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred             ecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence            999999987632     2233457889999999999971                                         


Q ss_pred             ---------------CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 ---------------CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 ---------------~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                                     ....++|+|+++.||+++++..+.|+||+.+..
T Consensus       166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                           014589999999999998766677999988754

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.80  E-value=5.3e-09  Score=108.10  Aligned_cols=131  Identities=15%  Similarity=0.053  Sum_probs=96.7

Q ss_pred             ccc-eeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEeecCCceEEEEeecC
Q 045343          526 EVG-RGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       526 ~LG-~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      .++ .|..+.||++...    ++..++||.....   ....+..|+.+++.+.+.+  +.+++++...++..++||||++
T Consensus        26 ~~~~gg~~~~v~~~~~~----~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           26 QQTIGCSDAAVFRLSAQ----GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             ECSCTTSSCEEEEEECT----TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             ecccCCCCceEEEEecC----CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            344 5556999998542    4567899986542   3356788999999986545  4568998888888999999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------------
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-------------------------------------------  639 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-------------------------------------------  639 (813)
                      +.+|.  ...   .   ....++.++++.|..||...                                           
T Consensus        99 G~~l~--~~~---~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (264)
T 1nd4_A           99 GQDLL--SSH---L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL  170 (264)
T ss_dssp             SEETT--TSC---C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred             CcccC--cCc---C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence            99884  211   1   12356778888888888531                                           


Q ss_pred             ------------CCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          640 ------------SAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       640 ------------~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                                  ...++|+|++|.||+++++..+.|+||+.+..
T Consensus       171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                        12399999999999998876677999999754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.75  E-value=1.9e-08  Score=109.43  Aligned_cols=142  Identities=16%  Similarity=0.206  Sum_probs=105.6

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEee--ccc-cccchhhhheeeeeeccc--cCCcceEEeEeecCC---ceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVF-QDGEKEFKNEVVVIGQTH--HKNLVRLLGFCDEGQ---NRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~---~~~l  596 (813)
                      +.|+.|.++.||+...     .+..+++|+..  ... ......+.+|..+++.+.  +..++++++++.+.+   ..++
T Consensus        44 ~~l~~G~sn~~y~v~~-----~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~  118 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVT-----PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY  118 (359)
T ss_dssp             EECCC-CCSCEEEEEC-----SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred             EEcCCcccceEEEEEE-----CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence            5789999999999865     23567888765  221 122457888999999987  456889999987763   4799


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC-------------------------------------  639 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~-------------------------------------  639 (813)
                      ||||+++..+.+...  ..++...+..++.++++.|+.||...                                     
T Consensus       119 vme~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          119 IMEFVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             EEECCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EEEecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            999999988754222  23567788899999999999999620                                     


Q ss_pred             ------------------CCCeeeCCCCCCcEEEcCCCC--EEEeeccCccccc
Q 045343          640 ------------------SAQIIHCDIKPQNILLDDYYN--ARISDFGLAKLLT  673 (813)
Q Consensus       640 ------------------~~~ivH~dlk~~NIll~~~~~--~kl~DfGla~~~~  673 (813)
                                        ...++|+|+++.|||++.++.  +.|+||+.+....
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence                              257999999999999997753  6899999987543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.49  E-value=5e-08  Score=103.52  Aligned_cols=186  Identities=19%  Similarity=0.158  Sum_probs=118.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCC--cceEEeEeecCC---ceEEEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKN--LVRLLGFCDEGQ---NRLLVY  598 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~g~~~~~~---~~~lV~  598 (813)
                      +.++.|....||+..        ..+++|+....  .....+.+|.++++.+. +..  +.+++......+   ..++||
T Consensus        26 ~~~~~G~~n~v~~v~--------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN--------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CEEEECSSEEEEEST--------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             EecCCCCcceEEEEC--------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            458899999999742        35788875432  23456888999998873 333  445665554433   347899


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc----------------------------------------
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED----------------------------------------  638 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~----------------------------------------  638 (813)
                      |+++|..|.+...  ..++...+..++.++++.++.||..                                        
T Consensus        96 ~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           96 TKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             ECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             cccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9999988875432  2356667777888888888888851                                        


Q ss_pred             ---------------CCCCeeeCCCCCCcEEEcC--CCCEEEeeccCccccccCcccceeec------------cccccc
Q 045343          639 ---------------CSAQIIHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQSKAIRTA------------IRGTKG  689 (813)
Q Consensus       639 ---------------~~~~ivH~dlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~------------~~gt~~  689 (813)
                                     ....++|+|+++.||++++  ...+.|+||+.+....+...-.....            .....+
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~  253 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK  253 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence                           1245899999999999998  55688999999876433211000000            000001


Q ss_pred             ccC-cccccCCCCCCccchhhHHHHHHHHHhCCcCC
Q 045343          690 YVA-PEWFRNSTITAKVDVYSFGVLLLEIISCRKSF  724 (813)
Q Consensus       690 y~a-PE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~  724 (813)
                      ... |+....  .....+.|+++.+++++.+|..++
T Consensus       254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            111 121111  011258899999999999998765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.86  E-value=3.6e-05  Score=83.24  Aligned_cols=84  Identities=7%  Similarity=-0.006  Sum_probs=56.2

Q ss_pred             ccc-ceeeeeeEEEEEEeccCC---cceEEEEEEeeccc---cccchhhhheeeeeecccc---CCcceEEeEeecCC--
Q 045343          525 EEV-GRGSFGIVYKGVILTTRT---STTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHH---KNLVRLLGFCDEGQ--  592 (813)
Q Consensus       525 ~~L-G~G~fG~Vykg~~~~~~~---~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~--  592 (813)
                      +.| +.|....+|+........   ++..+++|......   ......+..|..+++.+..   ..+.++++++.+.+  
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            457 888899999876531000   15567888754322   1123567889999988853   35778888886653  


Q ss_pred             -ceEEEEeecCCCchhh
Q 045343          593 -NRLLVYEFLNNGTLAS  608 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~  608 (813)
                       ..++||||+++..+.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence             4689999999877653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.84  E-value=3.2e-05  Score=80.02  Aligned_cols=136  Identities=17%  Similarity=0.116  Sum_probs=92.7

Q ss_pred             ccceeeee-eEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEeecCC
Q 045343          526 EVGRGSFG-IVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       526 ~LG~G~fG-~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      .+..|..| .||+....   .++..+.+|+-...   ...++.+|...|+.+. +--+.++++++.+++..++|||++++
T Consensus        31 ~~~~G~S~~~v~rl~~~---~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGK---PNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECC---TTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred             EccCCCcCCeEEEEEec---CCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence            34445554 68886542   24556888876432   3456788888888774 44477899999988899999999999


Q ss_pred             CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------------
Q 045343          604 GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED---------------------------------------------  638 (813)
Q Consensus       604 gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~---------------------------------------------  638 (813)
                      .++.+.....    ......+..++++.|.-||..                                             
T Consensus       105 ~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (272)
T 4gkh_A          105 KTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW  180 (272)
T ss_dssp             EEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred             ccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence            8876654221    122334445555555555531                                             


Q ss_pred             ----------CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 ----------CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 ----------~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                                ....++|+|+.+.|||+++++.+-|+||+.+..
T Consensus       181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                      012379999999999999887778999998754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.79  E-value=6.1e-05  Score=79.63  Aligned_cols=136  Identities=18%  Similarity=0.192  Sum_probs=89.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccC---CcceEEeEee-cCCceEEEEee
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHK---NLVRLLGFCD-EGQNRLLVYEF  600 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~-~~~~~~lV~e~  600 (813)
                      +.++.|....||+.        +..++||+-..  ......+..|.++|+.+.+.   .+.+++.++. .....++|||+
T Consensus        25 ~~l~~G~~n~v~~v--------g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           25 ESLGEGFRNYAILV--------NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEECSSEEEEEE--------TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eecCCCcceeEEEE--------CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence            45788888899986        23477777432  22345688999999998653   3567777774 44567899999


Q ss_pred             cCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 045343          601 LNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED------------------------------------------  638 (813)
Q Consensus       601 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~------------------------------------------  638 (813)
                      ++|..|.+....  .++...+..++.++++.|+.||..                                          
T Consensus        95 i~G~~l~~~~~~--~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           95 VQGQILGEDGMA--VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CCSEECHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             cCCeECchhhhh--hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            999888653211  123333344444444444444421                                          


Q ss_pred             ---------------CCCCeeeCCCCCCcEEEcC---CCC-EEEeeccCcccc
Q 045343          639 ---------------CSAQIIHCDIKPQNILLDD---YYN-ARISDFGLAKLL  672 (813)
Q Consensus       639 ---------------~~~~ivH~dlk~~NIll~~---~~~-~kl~DfGla~~~  672 (813)
                                     ....++|+|+++.||+++.   ++. ..|+||+.+...
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                           2346799999999999987   455 489999988653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.34  E-value=0.00038  Score=76.34  Aligned_cols=75  Identities=15%  Similarity=0.092  Sum_probs=47.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-------ccchhhhheeeeeecccc--C-CcceEEeEeecCCce
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-------DGEKEFKNEVVVIGQTHH--K-NLVRLLGFCDEGQNR  594 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~g~~~~~~~~  594 (813)
                      +.||.|..+.||++....   .+..++||.......       .....+..|.++++.+..  + .+.+++.+  +.+..
T Consensus        36 ~~lg~G~~n~vyrv~~~~---~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQE---HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             EECCCCceEEEEEEEECC---CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCcc
Confidence            579999999999986531   346789997642111       123446778888887742  3 34456654  34456


Q ss_pred             EEEEeecCCC
Q 045343          595 LLVYEFLNNG  604 (813)
Q Consensus       595 ~lV~e~~~~g  604 (813)
                      ++|||++++.
T Consensus       111 ~lvmE~l~g~  120 (397)
T 2olc_A          111 VTVMEDLSHL  120 (397)
T ss_dssp             EEEECCCTTS
T ss_pred             EEEEEeCCCc
Confidence            8999999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.25  E-value=0.00057  Score=73.05  Aligned_cols=138  Identities=17%  Similarity=0.177  Sum_probs=78.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc--CCcceEEeE------eecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH--KNLVRLLGF------CDEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~------~~~~~~~~l  596 (813)
                      +.|+.|..+.||+....     +..+++|+....    ..++..|..+++.+..  -.+.+++..      .......++
T Consensus        38 ~~l~gG~~n~~~~v~~~-----~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~  108 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD-----SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV  108 (346)
T ss_dssp             EECC----CEEEEEEET-----TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred             eeccccccCcEEEEEeC-----CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence            35666778899998652     234888887642    2334455566665532  123444431      123456789


Q ss_pred             EEeecCCCchh-----------h---hhhcc------C--------CCCHHHHH--------------------------
Q 045343          597 VYEFLNNGTLA-----------S---FLFGN------L--------KPSWNLRT--------------------------  622 (813)
Q Consensus       597 V~e~~~~gsL~-----------~---~l~~~------~--------~l~~~~~~--------------------------  622 (813)
                      |+||++|..+.           .   .++..      .        ...|....                          
T Consensus       109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  188 (346)
T 2q83_A          109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY  188 (346)
T ss_dssp             EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred             EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence            99999986542           0   11110      0        01232110                          


Q ss_pred             -----HHHHHHHHHHHHhhh----------cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          623 -----NIAFQIARGLLYLHE----------DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       623 -----~i~~~ia~gl~yLH~----------~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                           .+...+.+++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence                 111123345666653          1257899999999999998888999999998753

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.99  E-value=0.0012  Score=69.56  Aligned_cols=134  Identities=18%  Similarity=0.131  Sum_probs=88.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc---cCCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH---HKNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.|+.|....+|+...     ++..++||.....   ....+..|...|+.+.   ...+.++++++......++||||+
T Consensus        42 ~~l~gG~~n~~y~v~~-----~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND-----EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEECCSSSSEEEEEES-----SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             EEeCCccceeeeEEEE-----CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            5688999999999764     3457888876532   2456888988888884   356889999988778899999999


Q ss_pred             CCCchhh--------h---hhcc---C-------------------CCCHHHHH---HHH----------------HHHH
Q 045343          602 NNGTLAS--------F---LFGN---L-------------------KPSWNLRT---NIA----------------FQIA  629 (813)
Q Consensus       602 ~~gsL~~--------~---l~~~---~-------------------~l~~~~~~---~i~----------------~~ia  629 (813)
                      ++..+..        .   |+..   .                   .-+|....   ++.                ..++
T Consensus       114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~  193 (312)
T 3jr1_A          114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV  193 (312)
T ss_dssp             CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred             cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence            9876521        1   1111   0                   01344321   111                1111


Q ss_pred             HHH-HHhh-hcCCCCeeeCCCCCCcEEEcCCCCEEEeecc
Q 045343          630 RGL-LYLH-EDCSAQIIHCDIKPQNILLDDYYNARISDFG  667 (813)
Q Consensus       630 ~gl-~yLH-~~~~~~ivH~dlk~~NIll~~~~~~kl~DfG  667 (813)
                      +-+ ..|. ....+.++|+|+.+.|++++.++ +.|.|+.
T Consensus       194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            111 2332 12357899999999999999887 8899973

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.88  E-value=0.0017  Score=71.76  Aligned_cols=80  Identities=9%  Similarity=0.018  Sum_probs=47.4

Q ss_pred             CCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCC---CCCccchhhHHHHHHH
Q 045343          640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST---ITAKVDVYSFGVLLLE  716 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~k~DVwS~Gvvl~e  716 (813)
                      ...++|+|+++.|||++.++ ++|+||+.+....+...-. .....-...|.+|+......   .....++......+|+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN  308 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence            56899999999999998876 9999999987644221100 00000012455655443111   1112445577777777


Q ss_pred             HHhCC
Q 045343          717 IISCR  721 (813)
Q Consensus       717 lltG~  721 (813)
                      ..+++
T Consensus       309 ~y~~~  313 (420)
T 2pyw_A          309 LFNKR  313 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.84  E-value=0.0028  Score=65.99  Aligned_cols=74  Identities=18%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc---CCcceEEeEeecCCceEEEEeec
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH---KNLVRLLGFCDEGQNRLLVYEFL  601 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~~lV~e~~  601 (813)
                      +.+|.|..+.||+..+.    +++.+.||+-..........|..|...|+.+..   --+.+++++.    ..++||||+
T Consensus        21 ~~~g~G~~~~vyrv~l~----DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l   92 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELA----DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV   92 (288)
T ss_dssp             EEEEEETTEEEEEEEET----TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred             EecCCCCCeEEEEEEEC----CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence            56899999999999874    678899998654433334567889988888742   2355666553    347899998


Q ss_pred             CCCch
Q 045343          602 NNGTL  606 (813)
Q Consensus       602 ~~gsL  606 (813)
                      +.+..
T Consensus        93 ~~~~~   97 (288)
T 3f7w_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            87653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.32  E-value=0.015  Score=56.82  Aligned_cols=101  Identities=13%  Similarity=0.007  Sum_probs=66.0

Q ss_pred             Cchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccceee
Q 045343          604 GTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT  682 (813)
Q Consensus       604 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~  682 (813)
                      -+|.++|.. ..+++++++|.++.|.++.|.-+-.. ... ..+=+.|..|+|..+|.+...+ ..+.            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc------------
Confidence            478999975 46889999999999999998776211 011 1333456999999999998864 1110            


Q ss_pred             cccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCc
Q 045343          683 AIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK  722 (813)
Q Consensus       683 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~  722 (813)
                        .....+.|||... ...+.+.=|||+|+++|.-+--..
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL  134 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL  134 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence              1123466888764 345678899999999999886443

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.04  E-value=0.0049  Score=64.55  Aligned_cols=136  Identities=15%  Similarity=0.152  Sum_probs=75.6

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEeec-
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYEFL-  601 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~-  601 (813)
                      .+.|+.|....+|+.         ..+++|....... .......|..+++.+....+ .++++++  .+.-++|+||+ 
T Consensus        23 i~~l~gG~tN~~~~~---------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA---------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE---------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred             eeEcCCcccccccee---------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence            467888989999987         2477777653211 12234568878877754444 4666553  33457899999 


Q ss_pred             CCCchhhh------------------hhccC-CC----C-HHHHHHHHH--------------HHHHHHH----Hhh-hc
Q 045343          602 NNGTLASF------------------LFGNL-KP----S-WNLRTNIAF--------------QIARGLL----YLH-ED  638 (813)
Q Consensus       602 ~~gsL~~~------------------l~~~~-~l----~-~~~~~~i~~--------------~ia~gl~----yLH-~~  638 (813)
                      ++..|...                  ++... .+    + +.....+..              .+.+.+.    .|. ..
T Consensus        91 ~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~  170 (301)
T 3dxq_A           91 GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHP  170 (301)
T ss_dssp             TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence            65554320                  01110 01    1 111111110              0111111    111 11


Q ss_pred             CCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          639 CSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       639 ~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ....++|+|+.+.||+ ..++.+.|+||..+...
T Consensus       171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             CCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            2456899999999999 56678899999987653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.01  E-value=0.0072  Score=63.84  Aligned_cols=140  Identities=13%  Similarity=0.107  Sum_probs=78.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeEe------ecCCceEE
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGFC------DEGQNRLL  596 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~------~~~~~~~l  596 (813)
                      +.|+.|....+|+....    ++ .+++|.....  ....++..|..++..+....  +.+++...      ......++
T Consensus        28 ~~i~~G~~n~~~~v~~~----~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTT----KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEECC---EEEEEEEES----SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             eccCCCcccceEEEEeC----Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEE
Confidence            34677888899998653    22 5778887542  12345667777777775323  33444221      12345689


Q ss_pred             EEeecCCCchhh----h----------hhcc------CC------CCHHHHHH------------HHHHHHHHHHHhhhc
Q 045343          597 VYEFLNNGTLAS----F----------LFGN------LK------PSWNLRTN------------IAFQIARGLLYLHED  638 (813)
Q Consensus       597 V~e~~~~gsL~~----~----------l~~~------~~------l~~~~~~~------------i~~~ia~gl~yLH~~  638 (813)
                      +++|++|..+..    .          ++..      ..      ..|.....            +...+.+.+..+++.
T Consensus       101 l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~  180 (322)
T 2ppq_A          101 LISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAH  180 (322)
T ss_dssp             EEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Confidence            999999865421    0          1110      00      01322111            011234455555532


Q ss_pred             ----CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 ----CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 ----~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                          ....++|+|+++.|||++++..+.|+||+.+..
T Consensus       181 ~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          181 WPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence                235799999999999999876668999988753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.99  E-value=0.0093  Score=65.89  Aligned_cols=76  Identities=13%  Similarity=0.198  Sum_probs=49.5

Q ss_pred             cccceeeeeeEEEEEEeccC----CcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e  599 (813)
                      +.|+.|-...+|+.......    .++..+.+|+....  .....+..|..++..+...++ .++++.+.+    .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            56788888999998764211    12456888876331  111456678888888864444 577776653    38999


Q ss_pred             ecCCCch
Q 045343          600 FLNNGTL  606 (813)
Q Consensus       600 ~~~~gsL  606 (813)
                      |+++..|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986444

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.94  E-value=0.016  Score=61.53  Aligned_cols=34  Identities=29%  Similarity=0.277  Sum_probs=28.8

Q ss_pred             CCCeeeCCCCCCcEEEcCC----CCEEEeeccCccccc
Q 045343          640 SAQIIHCDIKPQNILLDDY----YNARISDFGLAKLLT  673 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~----~~~kl~DfGla~~~~  673 (813)
                      ...++|+|+.+.||+++.+    ..+.|+||+.+....
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            4589999999999999874    689999999886543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.79  E-value=0.029  Score=62.25  Aligned_cols=74  Identities=15%  Similarity=0.122  Sum_probs=46.4

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEeecCC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +.|+.|-...+|+.....   .+..+++|+..... ...-....|..++..+...++ .++++.+..    .+|+||+++
T Consensus       114 ~~lsgG~tN~~y~v~~~~---~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G  185 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMS---KQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG  185 (458)
T ss_dssp             EEECC--CEEEEEEEETT---TTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred             EEcCCCeEeEEEEEEECC---CCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence            568888889999987631   23567788764321 111123578888888865555 577777632    359999987


Q ss_pred             Cch
Q 045343          604 GTL  606 (813)
Q Consensus       604 gsL  606 (813)
                      ..|
T Consensus       186 ~~l  188 (458)
T 2qg7_A          186 YAL  188 (458)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            555

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.76  E-value=0.02  Score=61.94  Aligned_cols=142  Identities=17%  Similarity=0.207  Sum_probs=82.9

Q ss_pred             cccceeeeeeEEEEEEecc----CCcceEEEEEEeeccccccchhhhheeeeeeccccCC-cceEEeEeecCCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTT----RTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN-LVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~----~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~lV~e  599 (813)
                      +.|..|-...+|+.....+    ..++..+.+|+.... ......+.+|..+++.+...+ ..++++++.+    .+|+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            4566787888999876321    113457888875321 223445678999988885333 3577777654    29999


Q ss_pred             ecCCCchhhh-----------------hhcc-----CCCC--HHHHHHHHHHHHH-------------------HHHHhh
Q 045343          600 FLNNGTLASF-----------------LFGN-----LKPS--WNLRTNIAFQIAR-------------------GLLYLH  636 (813)
Q Consensus       600 ~~~~gsL~~~-----------------l~~~-----~~l~--~~~~~~i~~~ia~-------------------gl~yLH  636 (813)
                      |+++..|..-                 |+..     ....  |..+.++..++..                   .+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665321                 1111     1112  3444445443321                   233332


Q ss_pred             h-----cCCCCeeeCCCCCCcEEEcCC----CCEEEeeccCccc
Q 045343          637 E-----DCSAQIIHCDIKPQNILLDDY----YNARISDFGLAKL  671 (813)
Q Consensus       637 ~-----~~~~~ivH~dlk~~NIll~~~----~~~kl~DfGla~~  671 (813)
                      +     .....++|+|+.+.||+++.+    +.+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            1     123579999999999999876    7899999998864

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.48  E-value=0.033  Score=60.04  Aligned_cols=77  Identities=14%  Similarity=0.110  Sum_probs=44.2

Q ss_pred             cccceeeeeeEEEEEEeccC-----CcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEE
Q 045343          525 EEVGRGSFGIVYKGVILTTR-----TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~  598 (813)
                      +.|+.|....+|+.......     ..+..+++|...... ........|..+++.+...++ .++++...    -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence            46778888899998764210     012567777764321 111234678888888864444 46776542    37899


Q ss_pred             eecCCCch
Q 045343          599 EFLNNGTL  606 (813)
Q Consensus       599 e~~~~gsL  606 (813)
                      ||+++..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987554

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=94.79  E-value=0.036  Score=58.50  Aligned_cols=138  Identities=12%  Similarity=0.035  Sum_probs=76.6

Q ss_pred             ccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCC--cceEEeE-----eecCCceEEEE
Q 045343          526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKN--LVRLLGF-----CDEGQNRLLVY  598 (813)
Q Consensus       526 ~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~-----~~~~~~~~lV~  598 (813)
                      .|+ |....||+....    ++..+++|..... .....++..|..++..+....  +++++..     ...+...++|+
T Consensus        33 ~l~-g~~n~~y~v~~~----~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDE----DRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEC-CSSSEEEEECCT----TCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred             eec-CcccceEEEEcC----CCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence            355 777789986542    3456889987532 112345677887777774322  3444443     11133457899


Q ss_pred             eecCCCchhh-----h---------hhc---c------CCCCHHHH----HHH---------------HHHHHHHHHHhh
Q 045343          599 EFLNNGTLAS-----F---------LFG---N------LKPSWNLR----TNI---------------AFQIARGLLYLH  636 (813)
Q Consensus       599 e~~~~gsL~~-----~---------l~~---~------~~l~~~~~----~~i---------------~~~ia~gl~yLH  636 (813)
                      |++++..+..     .         ++.   .      ...++...    ..+               ...+.+.+..+.
T Consensus       107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  186 (328)
T 1zyl_A          107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT  186 (328)
T ss_dssp             ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence            9998865421     0         111   0      01121110    001               111112222332


Q ss_pred             hc----CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          637 ED----CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       637 ~~----~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      +.    ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            11    245689999999999999 4 899999988754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.88  E-value=0.22  Score=52.84  Aligned_cols=33  Identities=24%  Similarity=0.307  Sum_probs=28.7

Q ss_pred             CCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ...++|+|+.+.||++++++.+.|+||+.+...
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            457999999999999998888999999887653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.92  E-value=0.19  Score=55.06  Aligned_cols=142  Identities=15%  Similarity=0.151  Sum_probs=83.3

Q ss_pred             cccceeeeeeEEEEEEeccCCc----ceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTRTS----TTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e  599 (813)
                      +.|..|-...+|+........+    +..+++|+..... ...-...+|..+++.+...++ .++++.+.    -++|+|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence            4577777889999876422111    4678888754322 222234678888888854344 46665442    378999


Q ss_pred             ecCCCchhhh-----------------hhc------------cCCC-CHHHHHHHHHHH-------------------HH
Q 045343          600 FLNNGTLASF-----------------LFG------------NLKP-SWNLRTNIAFQI-------------------AR  630 (813)
Q Consensus       600 ~~~~gsL~~~-----------------l~~------------~~~l-~~~~~~~i~~~i-------------------a~  630 (813)
                      |+++..|..-                 |+.            .... -|..+.++..++                   .+
T Consensus       151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  230 (424)
T 3mes_A          151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE  230 (424)
T ss_dssp             CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred             EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence            9998664210                 011            0011 133333333221                   22


Q ss_pred             HHHHhhh---------------------cCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          631 GLLYLHE---------------------DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       631 gl~yLH~---------------------~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      .+..|.+                     .....++|+|+.+.||+ +.++.+.|+||..+...
T Consensus       231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~  292 (424)
T 3mes_A          231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN  292 (424)
T ss_dssp             HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC
Confidence            3333321                     11346899999999999 88889999999988643

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=87.09  E-value=0.45  Score=38.42  Aligned_cols=33  Identities=18%  Similarity=0.481  Sum_probs=28.4

Q ss_pred             ccCChhhhHHhhcccCCeeeEEecC--ceeeeecc
Q 045343          384 RPYNEVQCKNSCLSDCFCAAVIFQD--DCCWFKKL  416 (813)
Q Consensus       384 ~~~s~~~C~~~Cl~nCsC~A~~~~~--~~C~~~~~  416 (813)
                      ..+++++|++.|+.+=.|+||.|+.  .-|+++..
T Consensus        28 ~~~sl~~Cq~aC~a~~~C~aFTyN~~s~~CflKs~   62 (82)
T 2ll3_A           28 RASSLSECRARCQAEKECSHYTYNVKSGLCYPKRG   62 (82)
T ss_dssp             ECSSHHHHHHHHHHCTTEEEEEEETTTTEEEEEES
T ss_pred             cCCCHHHHHHHhhccCCCCeEEeccCCCceEcccC
Confidence            4579999999999999999999975  45999864

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=85.67  E-value=3.1  Score=42.28  Aligned_cols=67  Identities=13%  Similarity=0.083  Sum_probs=33.7

Q ss_pred             CCCeeEEEecCCCCCC---CCCCceEEEEeeC-ccEEEeCCC-CCEEeeeccCC-C-----ceeEEEEecCcCEEEEe
Q 045343           79 PAKTVVWYTDNKDQNP---AVPRGSQVKLTAD-HGLVLNDPQ-GKQVWSSEIDI-G-----TVAVGHMNDTGNFVLAS  145 (813)
Q Consensus        79 ~~~tvvWvanr~~~~~---~~~~~~~l~~~~~-g~l~l~~~~-~~~~wst~~~~-~-----~~~~~~l~d~Gnlvl~~  145 (813)
                      +...++|...+...+.   ....+-.+....+ +.++.+|.+ |+++|+..... .     ....+.++.+||+++.+
T Consensus       153 ~~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          153 PNGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             TTSCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             CCCCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            3356777765542111   0112223333333 246666666 77777765321 1     13456667777777765

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=83.99  E-value=37  Score=34.00  Aligned_cols=74  Identities=14%  Similarity=0.271  Sum_probs=43.5

Q ss_pred             EEEEEeeccCCCeeEEEecCCCCCCCC----CCceEEEEeeCccEEEeCCCCCEEeeeccCC-CceeEEEEecCcCEEEE
Q 045343           70 LLSIFYSNIPAKTVVWYTDNKDQNPAV----PRGSQVKLTADHGLVLNDPQGKQVWSSEIDI-GTVAVGHMNDTGNFVLA  144 (813)
Q Consensus        70 ~lgiw~~~~~~~tvvWvanr~~~~~~~----~~~~~l~~~~~g~l~l~~~~~~~~wst~~~~-~~~~~~~l~d~Gnlvl~  144 (813)
                      .+.||=  .....++|.........+.    ..++.+-++.++.+..+|.+|+.+|...... .....+..+.+||+++.
T Consensus        16 ~v~~~d--~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~   93 (276)
T 3no2_A           16 KIAIIN--KDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVA   93 (276)
T ss_dssp             EEEEEE--TTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEE
T ss_pred             EEEEEE--CCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEE
Confidence            344552  2245778877654210111    1233444466666777888999999988642 23345677778887775


Q ss_pred             e
Q 045343          145 S  145 (813)
Q Consensus       145 ~  145 (813)
                      +
T Consensus        94 ~   94 (276)
T 3no2_A           94 W   94 (276)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=80.97  E-value=3.7  Score=40.03  Aligned_cols=114  Identities=11%  Similarity=0.113  Sum_probs=76.9

Q ss_pred             ccCCcceEEeEeecCCceEEEEeecCCC-chhhhhhccCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeeCCCCCCcEE
Q 045343          577 HHKNLVRLLGFCDEGQNRLLVYEFLNNG-TLASFLFGNLKPSWNLRTNIAFQIARGLL-YLHEDCSAQIIHCDIKPQNIL  654 (813)
Q Consensus       577 ~h~niv~l~g~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~~ia~gl~-yLH~~~~~~ivH~dlk~~NIl  654 (813)
                      .||++  -...-.+++...+.|+.-+++ ++..+    ...+...+++++.+|+.... +++     .-+|--|.|+||+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~  116 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM  116 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence            57777  444446777777777765443 33322    45678889999999988776 666     5588899999999


Q ss_pred             EcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCC
Q 045343          655 LDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFD  725 (813)
Q Consensus       655 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~  725 (813)
                      ++.++.++|.-.|+-..                   ++|.-+     ++.-=.-.+=+++..++.++..|+
T Consensus       117 f~~~~~p~i~hRGi~~~-------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          117 FNRALEPFFLHVGVKES-------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             ECTTCCEEESCCEETTT-------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             EeCCCcEEEEEcCCccc-------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999987665332                   233221     111223356677888888877664

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=80.21  E-value=1.3  Score=48.02  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=25.5

Q ss_pred             CeeeCCCCCCcEEE------cCCCCEEEeeccCccc
Q 045343          642 QIIHCDIKPQNILL------DDYYNARISDFGLAKL  671 (813)
Q Consensus       642 ~ivH~dlk~~NIll------~~~~~~kl~DfGla~~  671 (813)
                      .++|+|+.+.|||+      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4567799999998865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	813
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-69
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-69
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-64
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-64
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-64
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-63
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-62
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-61
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-61
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-61
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-60
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-60
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-60
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-59
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-59
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-59
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-58
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-58
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-58
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-58
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-58
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-57
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-57
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-57
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-57
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-57
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-56
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-55
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-53
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-52
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-52
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-50
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-49
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-48
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-47
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-45
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-44
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-44
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-44
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-43
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-43
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-42
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-41
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-41
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-41
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-40
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-40
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-40
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-39
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-37
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-37
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-37
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-35
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-35
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-34
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-34
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-32
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-32
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-32
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-26
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-20
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-09
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-05
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	3e-09
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-04
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	1e-07
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	1e-06
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	3e-06
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	1e-04
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	0.004

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  229 bits (584), Expect = 2e-69
 Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 34/304 (11%)

Query: 511 FSYKELEEATDNFKEEV-----------GRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF 559
           F++++  EA   F +E+           G G FG V  G +         VA+K L   +
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 560 -QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-S 617
            +   ++F +E  ++GQ  H N++ L G   +    +++ EF+ NG+L SFL  N    +
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 618 WNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS 677
                 +   IA G+ YL +      +H D+  +NIL++     ++SDFGL++ L  + S
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183

Query: 678 KAIRTA---IRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 734
               T+    +    + APE  +    T+  DV+S+G+++ E++S  +            
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---------- 233

Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                +    N+ + + +E D      + C   L  + + C Q+D + RP   +++  L+
Sbjct: 234 -----YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

Query: 795 GVVE 798
            ++ 
Sbjct: 289 KMIR 292

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  227 bits (580), Expect = 3e-69
 Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 24/284 (8%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             + +G GSFG VYKG          AV +  +        + FKNEV V+ +T H N++
Sbjct: 12  VGQRIGSGSFGTVYKG----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
             +G+    Q   +V ++    +L   L     K       +IA Q A+G+ YLH     
Sbjct: 68  LFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS-- 124

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---N 698
            IIH D+K  NI L +    +I DFGLA + +          + G+  ++APE  R    
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
           +  + + DVY+FG++L E+++ +  +      +   +       Y +  L  +       
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIFMVGRGYLSPDLSKVRSN---- 237

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLP 802
                C + +  +   C+++    RP   ++L  +E +   SLP
Sbjct: 238 -----CPKAMKRLMAECLKKKRDERPLFPQILASIELLAR-SLP 275

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  216 bits (551), Expect = 1e-64
 Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 23/293 (7%)

Query: 517 EEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNEVVVIGQ 575
                +F E +GRG FG VY G +L         AVK L+R+   GE  +F  E +++  
Sbjct: 25  SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD 84

Query: 576 THHKNLVRLLGFCDEGQNR-LLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLL 633
             H N++ LLG C   +   L+V  ++ +G L +F+      P+         Q+A+G  
Sbjct: 85  FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-- 142

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI--RTAIRGTKGYV 691
            +    S + +H D+  +N +LD+ +  +++DFGLA+ +   +  ++  +T  +    ++
Sbjct: 143 -MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 201

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           A E  +    T K DV+SFGVLL E+++       ++        D      +  +L   
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLLQGRRLLQ- 255

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPN 804
                       C + L  V + C      +RP+  +++  +  +    +  +
Sbjct: 256 ---------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 299

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  214 bits (547), Expect = 2e-64
 Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 27/274 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             E +G G FG V+ G         T VAVK L +        F  E  ++ Q  H+ LV
Sbjct: 17  LVERLGAGQFGEVWMG----YYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLV 71

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQIARGLLYLHEDCS 640
           RL     +     ++ E++ NG+L  FL     +K + N   ++A QIA G+ ++ E   
Sbjct: 72  RLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN- 129

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              IH D++  NIL+ D  + +I+DFGLA+L+  N+  A R   +    + APE     T
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGT 186

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
            T K DV+SFG+LL EI++  +                 +    N ++   +E     + 
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIP---------------YPGMTNPEVIQNLERGYRMVR 231

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
              C E+L  +   C +E P  RPT   +  +LE
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  213 bits (543), Expect = 7e-64
 Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 26/287 (9%)

Query: 514 KELEEATDNFK---EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE-KEFKNE 569
           K+L    DN      E+G G+FG V +GV    +     VA+K L +  +  + +E   E
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQ-IDVAIKVLKQGTEKADTEEMMRE 59

Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQI 628
             ++ Q  +  +VRL+G C + +  +LV E    G L  FL G  +    +    +  Q+
Sbjct: 60  AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 118

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS-KAIRTAIRGT 687
           + G+ YL E      +H D+  +N+LL + + A+ISDFGL+K L  + S    R+A +  
Sbjct: 119 SMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 175

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             + APE       +++ DV+S+GV + E +S  +                 +   +  +
Sbjct: 176 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ---------------KPYKKMKGPE 220

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           +   +E         +C  +L  +   C       RP    V Q + 
Sbjct: 221 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (534), Expect = 8e-63
 Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 25/278 (8%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V+ G  L        VA+K +       E++F  E  V+ +  H  L
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDK----VAIKTIREGAMS-EEDFIEEAEVMMKLSHPKL 62

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCS 640
           V+L G C E     LV+EF+ +G L+ +L       +      +   +  G+ YL E C 
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 121

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
             +IH D+  +N L+ +    ++SDFG+ + +  +Q  +     +    + +PE F  S 
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSR 178

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
            ++K DV+SFGVL+ E+ S  K                 ++   N ++ + +        
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIP---------------YENRSNSEVVEDISTGFRLYK 223

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
                  +  +   C +E P  RP   ++L+ L  + E
Sbjct: 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 3e-62
 Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 25/274 (9%)

Query: 522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL 581
            F +E+G G FG+V  G           VA+K +       E EF  E  V+    H+ L
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYD----VAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKL 61

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCS 640
           V+L G C + +   ++ E++ NG L ++L              +   +   + YL     
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ- 120

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              +H D+  +N L++D    ++SDFGL++ +  +         +    +  PE    S 
Sbjct: 121 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSK 177

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
            ++K D+++FGVL+ EI S  K                 ++ + N +  + +   +    
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGK---------------MPYERFTNSETAEHIAQGLRLYR 222

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                EK+  +   C  E    RPT K +L  + 
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (531), Expect = 1e-61
 Identities = 58/306 (18%), Positives = 121/306 (39%), Gaps = 39/306 (12%)

Query: 516 LEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG-EKEFKNEVVV 572
           +E   D+F+   E+G G+ G+V+K     +      +A K +    +     +   E+ V
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGL---VMARKLIHLEIKPAIRNQIIRELQV 57

Query: 573 IGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
           + + +   +V   G         +  E ++ G+L   L    +    +   ++  + +GL
Sbjct: 58  LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 117

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            YL E     I+H D+KP NIL++     ++ DFG++  L  + +     +  GT+ Y++
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMS 171

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL----------------- 735
           PE  + +  + + D++S G+ L+E+   R        +E  ++                 
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 231

Query: 736 ----------TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
                      D        E LD +V      L       +       C+ ++P+ R  
Sbjct: 232 TPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD 291

Query: 786 MKKVLQ 791
           +K+++ 
Sbjct: 292 LKQLMV 297

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 2e-61
 Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 39/317 (12%)

Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDR-VFQDG 562
           T LP     E      +F + +G G+FG V +        S  A  VAVK L        
Sbjct: 10  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 69

Query: 563 EKEFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----- 616
            +   +E+ V+    +H N+V LLG C  G   L++ E+   G L +FL           
Sbjct: 70  REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129

Query: 617 -------------SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI 663
                              + ++Q+A+G+ +L    S   IH D+  +NILL      +I
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKI 186

Query: 664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKS 723
            DFGLA+ +  + +  ++   R    ++APE   N   T + DV+S+G+ L E+ S   S
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246

Query: 724 FDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLR 783
                                + K   +++     L+      ++  +   C   DP  R
Sbjct: 247 --------------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 292

Query: 784 PTMKKVLQMLEGVVEVS 800
           PT K+++Q++E  +  S
Sbjct: 293 PTFKQIVQLIEKQISES 309

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  207 bits (527), Expect = 2e-61
 Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 47/316 (14%)

Query: 512 SYKELEEATDNFK--EEVGRGSFGIVYKGVI--LTTRTSTTAVAVKKLDR-VFQDGEKEF 566
               LE   +N +   ++G G+FG V++     L      T VAVK L      D + +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---------- 616
           + E  ++ +  + N+V+LLG C  G+   L++E++  G L  FL                
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 617 --------------SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNAR 662
                         S   +  IA Q+A G+ YL E      +H D+  +N L+ +    +
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVK 180

Query: 663 ISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK 722
           I+DFGL++ +                 ++ PE    +  T + DV+++GV+L EI S   
Sbjct: 181 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240

Query: 723 SFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSL 782
                M  E              E +  + +G++ A  +  C  +L  +   C  + P+ 
Sbjct: 241 QPYYGMAHE--------------EVIYYVRDGNILACPE-NCPLELYNLMRLCWSKLPAD 285

Query: 783 RPTMKKVLQMLEGVVE 798
           RP+   + ++L+ + E
Sbjct: 286 RPSFCSIHRILQRMCE 301

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (517), Expect = 3e-60
 Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 23/272 (8%)

Query: 526 EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLVR 583
           E+G G+FG V KG     +   T VAVK L     D     E   E  V+ Q  +  +VR
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKT-VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72

Query: 584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQI 643
           ++G C E ++ +LV E    G L  +L  N          +  Q++ G+ YL E   +  
Sbjct: 73  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 128

Query: 644 IHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IRTAIRGTKGYVAPEWFRNSTIT 702
           +H D+  +N+LL   + A+ISDFGL+K L  +++    +T  +    + APE       +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188

Query: 703 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           +K DV+SFGVL+ E  S  +                 +   +  ++  ++E         
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQ---------------KPYRGMKGSEVTAMLEKGERMGCPA 233

Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
            C  ++  +   C   D   RP    V   L 
Sbjct: 234 GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (517), Expect = 6e-60
 Identities = 57/298 (19%), Positives = 114/298 (38%), Gaps = 29/298 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
            +E +G+G FG V++G     +     VAVK      ++     + E+       H+N++
Sbjct: 7   LQESIGKGRFGEVWRG-----KWRGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENIL 60

Query: 583 RLLGFCDEGQNRL----LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED 638
             +   ++         LV ++  +G+L  +L      +      +A   A GL +LH +
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHME 119

Query: 639 CSAQ-----IIHCDIKPQNILLDDYYNARISDFGLAKLL--TLNQSKAIRTAIRGTKGYV 691
                    I H D+K +NIL+       I+D GLA       +          GTK Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179

Query: 692 APEWFRNS------TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY----AILTDWAFD 741
           APE   +S          + D+Y+ G++  EI        I    +      + +D + +
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239

Query: 742 CYRNEKLDDLVEGDM-EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
             R    +  +  ++       + +  +  +   C   + + R T  ++ + L  + +
Sbjct: 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (518), Expect = 8e-60
 Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 44/299 (14%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDRVFQDGEKE-FKNEVVVIGQ-THH 578
           F + +G G+FG V          +  +  VAVK L       E+E   +E+ ++ Q   H
Sbjct: 41  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 100

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---------------------- 616
           +N+V LLG C       L++E+   G L ++L    +                       
Sbjct: 101 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160

Query: 617 -SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
            ++      A+Q+A+G+ +L        +H D+  +N+L+      +I DFGLA+ +  +
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
            +  +R   R    ++APE       T K DV+S+G+LL EI S   +    +  +    
Sbjct: 218 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD---- 273

Query: 736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                          L++   +        E++ ++   C   D   RP+   +   L 
Sbjct: 274 ----------ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  202 bits (514), Expect = 1e-59
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 27/293 (9%)

Query: 512 SYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNE 569
           +Y + E    +     ++G G +G VY+GV    +  +  VAVK L     + E EF  E
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE-EFLKE 63

Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLF--GNLKPSWNLRTNIAFQ 627
             V+ +  H NLV+LLG C       ++ EF+  G L  +L      + S  +   +A Q
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 123

Query: 628 IARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGT 687
           I+  + YL        IH D+  +N L+ + +  +++DFGL++L+T +   A     +  
Sbjct: 124 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFP 179

Query: 688 KGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK 747
             + APE    +  + K DV++FGVLL EI +   S                +      +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP---------------YPGIDLSQ 224

Query: 748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
           + +L+E D        C EK+  +   C Q +PS RP+  ++ Q  E + + S
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (513), Expect = 2e-59
 Identities = 76/299 (25%), Positives = 129/299 (43%), Gaps = 29/299 (9%)

Query: 509 PCFSYKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEF 566
              +    E   ++ +   ++G+G FG V+ G    T   TT VA+K L        + F
Sbjct: 5   QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG----TWNGTTRVAIKTLKPGTMS-PEAF 59

Query: 567 KNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPS--WNLRTNI 624
             E  V+ +  H+ LV+L       +   +V E+++ G+L  FL G            ++
Sbjct: 60  LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 118

Query: 625 AFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAI 684
           A QIA G+ Y+        +H D++  NIL+ +    +++DFGLA+L+  N+  A R   
Sbjct: 119 AAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGA 174

Query: 685 RGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 744
           +    + APE       T K DV+SFG+LL E+ +  +                 +    
Sbjct: 175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMV 219

Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP 803
           N ++ D VE         +C E L  +   C +++P  RPT + +   LE     + P 
Sbjct: 220 NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 4e-59
 Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 33/277 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             + +G+G FG V  G           VAVK +        + F  E  V+ Q  H NLV
Sbjct: 11  LLQTIGKGEFGDVMLG-----DYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLV 63

Query: 583 RLLGFCDEGQNRL-LVYEFLNNGTLASFLFGNLKP--SWNLRTNIAFQIARGLLYLHEDC 639
           +LLG   E +  L +V E++  G+L  +L    +     +     +  +   + YL    
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--- 120

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
               +H D+  +N+L+ +   A++SDFGL K  +  Q        +    + APE  R  
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREK 175

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL 759
             + K DV+SFG+LL EI S  +                 +     + +   VE   +  
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRVP---------------YPRIPLKDVVPRVEKGYKMD 220

Query: 760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV 796
               C   +  V   C   D ++RP+  ++ + LE +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 1e-58
 Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 45/311 (14%)

Query: 506 TNLPCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEK 564
           T  P   + +++     F++ +G G+FG V K  I          A+K++     +D  +
Sbjct: 2   TIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGL-RMDAAIKRMKEYASKDDHR 55

Query: 565 EFKNEVVVIGQ-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP------- 616
           +F  E+ V+ +  HH N++ LLG C+      L  E+  +G L  FL  +          
Sbjct: 56  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 115

Query: 617 ---------SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFG 667
                    S     + A  +ARG+ YL      Q IH D+  +NIL+ + Y A+I+DFG
Sbjct: 116 IANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFG 172

Query: 668 LAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE 727
           L++   +   K   T  R    ++A E    S  T   DV+S+GVLL EI+S   +    
Sbjct: 173 LSRGQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--- 226

Query: 728 MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMK 787
                       +      +L + +         + C +++  +   C +E P  RP+  
Sbjct: 227 ------------YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 274

Query: 788 KVLQMLEGVVE 798
           ++L  L  ++E
Sbjct: 275 QILVSLNRMLE 285

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 2e-58
 Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 21/279 (7%)

Query: 519 ATD-NFKEEVGRGSFGIVYKGVILTT-RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQ 575
            T+    + +G G+FG VYKG+ +         VA+K+L         KE  +E  V+  
Sbjct: 8   ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 67

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             + ++ RLLG C     +L+         L                N   QIA+G+ YL
Sbjct: 68  VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
                 +++H D+  +N+L+    + +I+DFGLAKLL   + +      +    ++A E 
Sbjct: 128 ---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
             +   T + DV+S+GV + E+++                    +D     ++  ++E  
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKP---------------YDGIPASEISSILEKG 229

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                   C   + M+ + C   D   RP  ++++    
Sbjct: 230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (503), Expect = 3e-58
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 24/275 (8%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD-RVFQDGEKEFKNEVVVIGQTH 577
           +++   + +G G++G V   V   T     AVAVK +D +   D  +  K E+ +    +
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLN 61

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHE 637
           H+N+V+  G   EG  + L  E+ + G L   +  ++            Q+  G++YLH 
Sbjct: 62  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 120

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR 697
                I H DIKP+N+LLD+  N +ISDFGLA +   N  + +   + GT  YVAPE  +
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178

Query: 698 NSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
                   VDV+S G++L  +++    +D +  +     +DW            +   D 
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWD-QPSDSCQEYSDWKEKKTYLNPWKKI---DS 234

Query: 757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             L  +             + E+PS R T+  + +
Sbjct: 235 APLALLH----------KILVENPSARITIPDIKK 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 3e-58
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 30/276 (10%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD--RVFQDGEKEFKNEVVVIGQTHHKN 580
           F  E+GRGSF  VYKG+   T   T  VA  +L   ++ +   + FK E  ++    H N
Sbjct: 13  FDIEIGRGSFKTVYKGLDTET---TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 69

Query: 581 LVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
           +VR            +  +LV E + +GTL ++L         +  +   QI +GL +LH
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 637 EDCSAQIIHCDIKPQNILLDD-YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
                 IIH D+K  NI +     + +I D GLA L   + +     A+ GT  ++APE 
Sbjct: 130 TRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEM 184

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
           +        VDVY+FG+ +LE+ +    +                     +    +  G 
Sbjct: 185 YEEK-YDESVDVYAFGMCMLEMATSEYPYS--------------ECQNAAQIYRRVTSGV 229

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             A  D   + ++  +   CI+++   R ++K +L 
Sbjct: 230 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (500), Expect = 8e-58
 Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 24/285 (8%)

Query: 521 DNFKEE--VGRGSFGIVYKGVILTTRTST-TAVAVKKLDRVF-QDGEKEFKNEVVVIGQT 576
                +  +G G FG VYKG++ T+       VA+K L   + +    +F  E  ++GQ 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYL 635
            H N++RL G   + +  +++ E++ NG L  FL       S      +   IA G+ YL
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI-RTAIRGTKGYVAPE 694
                   +H D+  +NIL++     ++SDFGL+++L  +       +  +    + APE
Sbjct: 127 ANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 183

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
                  T+  DV+SFG+++ E+++  +                 +    N ++   +  
Sbjct: 184 AISYRKFTSASDVWSFGIVMWEVMTYGERP---------------YWELSNHEVMKAIND 228

Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV 799
                  + C   +  + + C Q++ + RP    ++ +L+ ++  
Sbjct: 229 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 1e-57
 Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 22/278 (7%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-FKNEVVVIGQTHHKNL 581
               +G G FG V++G+ ++      AVA+K       D  +E F  E + + Q  H ++
Sbjct: 11  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCS 640
           V+L+G   E     ++ E    G L SFL               A+Q++  L YL     
Sbjct: 71  VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 128

Query: 641 AQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNST 700
              +H DI  +N+L+      ++ DFGL++ +  + +    +  +    ++APE      
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR 185

Query: 701 ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
            T+  DV+ FGV + EI+         +                 + +  +  G+   + 
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------------DVIGRIENGERLPMP 231

Query: 761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
              C   L  +   C   DPS RP   ++   L  ++E
Sbjct: 232 P-NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 1e-57
 Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 33/283 (11%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQT 576
           ++++    +G GS+G   K    +       +  K+LD         +   +EV ++ + 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGK---ILVWKELDYGSMTEAEKQMLVSEVNLLREL 60

Query: 577 HHKNLVRLLGFCDEGQNRLL--VYEFLNNGTLASFLFGNLKP----SWNLRTNIAFQIAR 630
            H N+VR      +  N  L  V E+   G LAS +    K            +  Q+  
Sbjct: 61  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 631 GLLYLHE--DCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
            L   H   D    ++H D+KP N+ LD   N ++ DFGLA++L  + S A   A  GT 
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTP 178

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL 748
            Y++PE     +   K D++S G LL E+ +    F                   + E  
Sbjct: 179 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---------------AFSQKELA 223

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             + EG    +   +  ++L  +    +      RP+++++L+
Sbjct: 224 GKIREGKFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILE 265

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  197 bits (501), Expect = 1e-57
 Identities = 63/273 (23%), Positives = 100/273 (36%), Gaps = 33/273 (12%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE---KEFKNEVVVIGQTHHKNL 581
            E+G GSFG VY    +        VA+KK+    +      ++   EV  + +  H N 
Sbjct: 21  REIGHGSFGAVYFARDVRNSE---VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 77

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
           ++  G         LV E+                       +     +GL YLH   S 
Sbjct: 78  IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 134

Query: 642 QIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFR---N 698
            +IH D+K  NILL +    ++ DFG A ++    S        GT  ++APE       
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS------FVGTPYWMAPEVILAMDE 188

Query: 699 STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA 758
                KVDV+S G+  +E+   +                  F+      L  + + +  A
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPL---------------FNMNAMSALYHIAQNESPA 233

Query: 759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           L      E        C+Q+ P  RPT + +L+
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (495), Expect = 3e-57
 Identities = 70/281 (24%), Positives = 111/281 (39%), Gaps = 25/281 (8%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ 575
            + +  E++G GSFG+V +G        T +VAVK L        +   +F  EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLY 634
             H+NL+RL G       + +V E    G+L   L  +         +  A Q+A G+ Y
Sbjct: 68  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR-TAIRGTKGYVAP 693
           L        IH D+  +N+LL      +I DFGL + L  N    +     +    + AP
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
           E  +  T +   D + FGV L E+ +  +   I +     IL     +  R  + +D   
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPED--- 239

Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
                     C + +  V + C    P  RPT   +   L 
Sbjct: 240 ----------CPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 8e-57
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 38/279 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ 575
           ++F+    +G+G FG VY      ++     +A+K L +        E + + EV +   
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKF---ILALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             H N++RL G+  +     L+ E+   GT+   L    K           ++A  L Y 
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 122

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S ++IH DIKP+N+LL      +I+DFG +     ++    RT + GT  Y+ PE 
Sbjct: 123 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEM 175

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLV 752
                   KVD++S GVL  E +  +  F+    +E    I   ++ F  +  E   DL+
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 235

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                                  ++ +PS RP +++VL+
Sbjct: 236 S--------------------RLLKHNPSQRPMLREVLE 254

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 2e-56
 Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 27/269 (10%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL 584
           E++G+G+ G VY  + + T      VA+++++   Q  ++   NE++V+ +  + N+V  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQ---EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82

Query: 585 LGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQII 644
           L     G    +V E+L  G+L   +             +  +  + L +LH   S Q+I
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLH---SNQVI 138

Query: 645 HCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAK 704
           H DIK  NILL    + +++DFG    +T  QSK  R+ + GT  ++APE         K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 705 VDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDI 762
           VD++S G++ +E+I     +  +  +   Y I T+   +    EKL           + +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSA------IFRDFL 250

Query: 763 KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                       C+  D   R + K++LQ
Sbjct: 251 N----------RCLDMDVEKRGSAKELLQ 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 9e-55
 Identities = 62/281 (22%), Positives = 112/281 (39%), Gaps = 32/281 (11%)

Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH 577
            D ++   E+G G+FG VYK     T       A K +D   ++  +++  E+ ++    
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSV---LAAAKVIDTKSEEELEDYMVEIDILASCD 67

Query: 578 HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLH 636
           H N+V+LL       N  ++ EF   G + + +    +P + +    +  Q    L YLH
Sbjct: 68  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 127

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                +IIH D+K  NIL     + +++DFG++   T    +  R +  GT  ++APE  
Sbjct: 128 ---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVV 182

Query: 697 RNST-----ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
              T        K DV+S G+ L+E+                       +      L  +
Sbjct: 183 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH---------------ELNPMRVLLKI 227

Query: 752 VEGDMEALNDIKCV-EKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            + +   L                C++++   R T  ++LQ
Sbjct: 228 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 5e-53
 Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 40/300 (13%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTST----TAVAVKKLDR-VFQDGEKEFKNEVVVIGQ-T 576
             + +G G+FG V     +          T VAVK L     +    +  +E+ ++    
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP----------------SWNL 620
            HKN++ LLG C +     ++ E+ + G L  +L     P                S   
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 621 RTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAI 680
             + A+Q+ARG+ YL    S + IH D+  +N+L+ +    +I+DFGLA+ +        
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 681 RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF 740
            T  R    ++APE   +   T + DV+SFGVLL EI +   S                +
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP---------------Y 238

Query: 741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
                E+L  L++          C  +L M+   C    PS RPT K++++ L+ +V ++
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 298

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 1e-52
 Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 31/289 (10%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTT--AVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHK 579
              E+G+GSFG+VY+GV            VA+K ++         EF NE  V+ + +  
Sbjct: 24  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 83

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIA 629
           ++VRLLG   +GQ  L++ E +  G L S+L               PS +    +A +IA
Sbjct: 84  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 143

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKG 689
            G+ YL    + + +H D+  +N ++ + +  +I DFG+ + +                 
Sbjct: 144 DGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 200

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD 749
           +++PE  ++   T   DV+SFGV+L EI +  +     +  E              + L 
Sbjct: 201 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--------------QVLR 246

Query: 750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE 798
            ++EG +    D  C + L  +   C Q +P +RP+  +++  ++  +E
Sbjct: 247 FVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (461), Expect = 4e-52
 Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 38/299 (12%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTA--VAVKKLDR-VFQDGEKEFKNEVVVIGQT-HH 578
             + +GRG+FG V +        + T   VAVK L         +   +E+ ++    HH
Sbjct: 17  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 76

Query: 579 KNLVRLLGFC-DEGQNRLLVYEFLNNGTLASFLFGNLKP----------------SWNLR 621
            N+V LLG C   G   +++ EF   G L+++L                      +    
Sbjct: 77  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 136

Query: 622 TNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIR 681
              +FQ+A+G+ +L    S + IH D+  +NILL +    +I DFGLA+ +  +     +
Sbjct: 137 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 193

Query: 682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFD 741
              R    ++APE   +   T + DV+SFGVLL EI S   S    +  +     +    
Sbjct: 194 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----EEFCR 248

Query: 742 CYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS 800
             +        +             ++    + C   +PS RPT  ++++ L  +++ +
Sbjct: 249 RLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 298

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  177 bits (450), Expect = 5e-50
 Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 31/275 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
             EE+G G+FG+V++     T  +    A K +    +  ++  + E+  +    H  LV
Sbjct: 30  IHEELGTGAFGVVHRVTERATGNN---FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 86

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHEDCSA 641
            L    ++    +++YEF++ G L   +       S +       Q+ +GL ++HE    
Sbjct: 87  NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---N 143

Query: 642 QIIHCDIKPQNILLDDYYNARI--SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
             +H D+KP+NI+     +  +   DFGL   L   QS        GT  + APE     
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGK 200

Query: 700 TITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLVEGDM 756
            +    D++S GVL   ++S    F  E  +E    + + DW  D      + +      
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE------ 254

Query: 757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +  + I+            +  DP+ R T+ + L+
Sbjct: 255 DGKDFIR----------KLLLADPNTRMTIHQALE 279

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 1e-49
 Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 34/282 (12%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQ 575
           ++FK  + +G GSF  V     L T       A+K L++   + ++       E  V+ +
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSRE---YAIKILEKRHIIKENKVPYVTRERDVMSR 64

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             H   V+L     + +       +  NG L  ++                +I   L YL
Sbjct: 65  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H      IIH D+KP+NILL++  + +I+DFG AK+L+    +A   +  GT  YV+PE 
Sbjct: 125 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 181

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLV 752
               +     D+++ G ++ ++++    F           I+  ++ F      K  DLV
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 241

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE 794
           E                      +  D + R   +++     
Sbjct: 242 E--------------------KLLVLDATKRLGCEEMEGYGP 263

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  172 bits (436), Expect = 1e-48
 Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 34/288 (11%)

Query: 513 YKELEEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR-VFQDGEKEFKNE 569
           +K+ E+  D +   + +G G+F  V       T+     VA+K + +   +  E   +NE
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQK---LVAIKCIAKKALEGKEGSMENE 57

Query: 570 VVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIA 629
           + V+ +  H N+V L    + G +  L+ + ++ G L   +      +    + + FQ+ 
Sbjct: 58  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 117

Query: 630 RGLLYLHEDCSAQIIHCDIKPQNILL---DDYYNARISDFGLAKLLTLNQSKAIRTAIRG 686
             + YLH+     I+H D+KP+N+L    D+     ISDFGL+K+        + +   G
Sbjct: 118 DAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACG 171

Query: 687 TKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCY 743
           T GYVAPE       +  VD +S GV+   ++     F  E   +    IL  ++ FD  
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 231

Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
             + + D       A + I+            +++DP  R T ++ LQ
Sbjct: 232 YWDDISD------SAKDFIR----------HLMEKDPEKRFTCEQALQ 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  171 bits (433), Expect = 1e-47
 Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 33/279 (11%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH 578
           D +   EE+G G+FG+V++ V   T         K ++  +   +   KNE+ ++ Q HH
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRV---FVAKFINTPYPLDKYTVKNEISIMNQLHH 85

Query: 579 KNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYLHE 637
             L+ L    ++    +L+ EFL+ G L   +       S     N   Q   GL ++H 
Sbjct: 86  PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH- 144

Query: 638 DCSAQIIHCDIKPQNILLDDYYNARI--SDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
                I+H DIKP+NI+ +    + +   DFGLA  L  ++   I      T  + APE 
Sbjct: 145 --EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEI 199

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLV 752
                +    D+++ GVL   ++S    F  E   E    +   DW FD      +    
Sbjct: 200 VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP-- 257

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
               EA + IK            +Q++P  R T+   L+
Sbjct: 258 ----EAKDFIK----------NLLQKEPRKRLTVHDALE 282

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 1e-45
 Identities = 56/283 (19%), Positives = 122/283 (43%), Gaps = 34/283 (12%)

Query: 517 EEATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIG 574
           +E  + +   E++GRG FGIV++ V  +++ +      K +     D +   K E+ ++ 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKT---YMAKFVKVKGTD-QVLVKKEISILN 56

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLL 633
              H+N++ L    +  +  ++++EF++   +   +  +    +     +   Q+   L 
Sbjct: 57  IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116

Query: 634 YLHEDCSAQIIHCDIKPQNILLD--DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYV 691
           +LH   S  I H DI+P+NI+         +I +FG A+ L    +      +     Y 
Sbjct: 117 FLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYY 170

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKL 748
           APE  ++  ++   D++S G L+  ++S    F  E  ++    I+  ++ FD    +++
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                   EA++ +             + ++   R T  + LQ
Sbjct: 231 SI------EAMDFVD----------RLLVKERKSRMTASEALQ 257

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  160 bits (405), Expect = 1e-44
 Identities = 59/289 (20%), Positives = 111/289 (38%), Gaps = 40/289 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLD---------RVFQDGEKEFKNE 569
           +N++  E +GRG   +V + +   T       AVK +D            Q+  +    E
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKE---YAVKIIDVTGGGSFSAEEVQELREATLKE 59

Query: 570 VVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQI 628
           V ++ +   H N+++L    +      LV++ +  G L  +L   +  S      I   +
Sbjct: 60  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 119

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
              +  LH      I+H D+KP+NILLDD  N +++DFG +  L   +       + GT 
Sbjct: 120 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTP 173

Query: 689 GYVAPEWFRNST------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 742
            Y+APE    S          +VD++S GV++  +++    F      +  ++       
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---HRKQMLMLRMIMSG 230

Query: 743 YRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                  +  +      + +             +   P  R T ++ L 
Sbjct: 231 NYQFGSPEWDDYSDTVKDLVS----------RFLVVQPQKRYTAEEALA 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  158 bits (400), Expect = 5e-44
 Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 36/291 (12%)

Query: 520 TDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIG 574
           +D ++  E +G G    V+    L        VAVK L             F+ E     
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRD---VAVKVLRADLARDPSFYLRFRREAQNAA 62

Query: 575 QTHHKNLVRLLGFC----DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIAR 630
             +H  +V +          G    +V E+++  TL   +      +      +     +
Sbjct: 63  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122

Query: 631 GLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRT-AIRGTKG 689
            L +        IIH D+KP NI++      ++ DFG+A+ +  + +   +T A+ GT  
Sbjct: 123 ALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 179

Query: 690 YVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA---ILTDWAFDCYRNE 746
           Y++PE  R  ++ A+ DVYS G +L E+++    F  +     A   +  D      R+E
Sbjct: 180 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239

Query: 747 KLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGV 796
            L          L+ +  V K        + ++P  R  T  ++   L  V
Sbjct: 240 GLS-------ADLDAV--VLK-------ALAKNPENRYQTAAEMRADLVRV 274

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (400), Expect = 7e-44
 Identities = 54/295 (18%), Positives = 94/295 (31%), Gaps = 26/295 (8%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
              ++G GSFG +Y G  +        VA+K      +    +   E  +         +
Sbjct: 11  LGRKIGSGSFGDIYLGTDIAAGEE---VAIKLECV--KTKHPQLHIESKIYKMMQGGVGI 65

Query: 583 RLLGFC-DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
             + +C  EG   ++V E L       F F + K S      +A Q+   + Y+H   S 
Sbjct: 66  PTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SK 122

Query: 642 QIIHCDIKPQNIL---LDDYYNARISDFGLAKLLTLNQSKAI-----RTAIRGTKGYVAP 693
             IH D+KP N L           I DFGLAK     ++           + GT  Y + 
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
                   + + D+ S G +L+        +            +   +   +  ++ L +
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242

Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPF 808
           G                   +C       +P    + Q+   +         Y F
Sbjct: 243 GYPSEFATYLN---------FCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  159 bits (402), Expect = 2e-43
 Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 33/275 (12%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVI-- 573
           ++F     +GRG FG VY      T       A+K LD+     + GE    NE +++  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKM---YAMKCLDKKRIKMKQGETLALNERIMLSL 60

Query: 574 -GQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGL 632
                   +V +            + + +N G L   L  +   S       A +I  GL
Sbjct: 61  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 120

Query: 633 LYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
            ++H      +++ D+KP NILLD++ + RISD GLA   +  +      A  GT GY+A
Sbjct: 121 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMA 173

Query: 693 PEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           PE  +      +  D +S G +L +++     F     ++   +            ++  
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMTLTMAVELP 229

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM 786
                E  + ++            +Q D + R   
Sbjct: 230 DSFSPELRSLLE----------GLLQRDVNRRLGC 254

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 6e-43
 Identities = 70/276 (25%), Positives = 110/276 (39%), Gaps = 31/276 (11%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDR---VFQDGEKEFKNEVVVIGQ 575
           ++F   + +G+GSFG V+      T       A+K L +   +  D  +    E  V+  
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQ---FFAIKALKKDVVLMDDDVECTMVEKRVLSL 58

Query: 576 T-HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
              H  L  +       +N   V E+LN G L   +    K   +  T  A +I  GL +
Sbjct: 59  AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 118

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           LH      I++ D+K  NILLD   + +I+DFG+ K   L  +K       GT  Y+APE
Sbjct: 119 LHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPE 173

Query: 695 WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG 754
                     VD +SFGVLL E++  +  F  +  EE        F   R +        
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-------LFHSIRMDNPFYPRWL 226

Query: 755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL 790
           + EA + +                +P  R  ++  +
Sbjct: 227 EKEAKDLLV----------KLFVREPEKRLGVRGDI 252

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 4e-42
 Identities = 60/280 (21%), Positives = 104/280 (37%), Gaps = 44/280 (15%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKL------DRVFQDGEKEFKNEVVVIGQ- 575
               +G G FG VY G+ ++       VA+K +      D            EVV++ + 
Sbjct: 8   VGPLLGSGGFGSVYSGIRVSDNL---PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 576 -THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLL 633
            +    ++RLL + +   + +L+ E                     L  +  +Q+   + 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 634 YLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
           + H      ++H DIK +NIL+D +    ++ DFG   LL         T   GT+ Y  
Sbjct: 125 HCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSP 177

Query: 693 PEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           PEW R          V+S G+LL +++     F+    +E  I     F    + +   L
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQVFFRQRVSSECQHL 234

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
           +                     WC+   PS RPT +++  
Sbjct: 235 IR--------------------WCLALRPSDRPTFEEIQN 254

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  152 bits (385), Expect = 1e-41
 Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 39/273 (14%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ 575
            +F+    +G GSFG V+              A+K L +         +   +E +++  
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRY---YAMKVLKKEIVVRLKQVEHTNDERLMLSI 60

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             H  ++R+ G   + Q   ++ +++  G L S L  + +    +    A ++   L YL
Sbjct: 61  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 120

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H      II+ D+KP+NILLD   + +I+DFG AK +       +   + GT  Y+APE 
Sbjct: 121 HSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYTLCGTPDYIAPEV 172

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILT-DWAFDCYRNEKLDDLV 752
                    +D +SFG+L+ E+++    F     M     IL  +  F  + NE + DL+
Sbjct: 173 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL 232

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT 785
                                  I  D S R  
Sbjct: 233 SR--------------------LITRDLSQRLG 245

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-41
 Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 25/285 (8%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE-----FKNEVVVIGQTHHK 579
           + +G G F  VYK     T      VA+KK+    +   K+        E+ ++ +  H 
Sbjct: 4   DFLGEGQFATVYKARDKNTNQ---IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 60

Query: 580 NLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDC 639
           N++ LL       N  LV++F+           +L  + +          +GL YLH+  
Sbjct: 61  NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120

Query: 640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNS 699
              I+H D+KP N+LLD+    +++DFGLAK  +        T    T+ Y APE    +
Sbjct: 121 ---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYTHQVVTRWYRAPELLFGA 175

Query: 700 T-ITAKVDVYSFGVLLLEIISCRKSFD----------IEMGEEYAILTDWAFDCYRNEKL 748
                 VD+++ G +L E++                 I           W   C   + +
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 749 DDLVEGDMEALNDIKCVEKLVMVSI-WCIQEDPSLRPTMKKVLQM 792
                  +   +        ++  I      +P  R T  + L+M
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 4e-41
 Identities = 58/278 (20%), Positives = 109/278 (39%), Gaps = 33/278 (11%)

Query: 524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNLV 582
            + +G G  G V +     T+      A+K L         + + EV +  + +   ++V
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEK---FALKMLQDC-----PKARREVELHWRASQCPHIV 68

Query: 583 RLLGFCD----EGQNRLLVYEFLNNGTLASFL--FGNLKPSWNLRTNIAFQIARGLLYLH 636
           R++   +      +  L+V E L+ G L S +   G+   +    + I   I   + YLH
Sbjct: 69  RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 128

Query: 637 EDCSAQIIHCDIKPQNILLDDYYN---ARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
              S  I H D+KP+N+L          +++DFG AK  T + S    T    T  YVAP
Sbjct: 129 ---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAP 182

Query: 694 EWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE 753
           E           D++S GV++  ++     F          ++       R  +      
Sbjct: 183 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY---SNHGLAISPGMKTRIRMGQY----- 234

Query: 754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +       +  E++ M+    ++ +P+ R T+ + + 
Sbjct: 235 -EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  149 bits (377), Expect = 6e-41
 Identities = 55/287 (19%), Positives = 110/287 (38%), Gaps = 24/287 (8%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQT 576
           + +   E++G G++G+VYK       T     A+KK+    +D         E+ ++ + 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGET----FALKKIRLEKEDEGIPSTTIREISILKEL 57

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            H N+V+L       +  +LV+E L+                    +   Q+  G+ Y H
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                +++H D+KPQN+L++     +I+DFGLA+   +   K     I            
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEIVTLWYRAPDVLM 173

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE-----YAILTDWAFDCYRNEKLDDL 751
            +   +  +D++S G +  E+++    F      +     + IL       + N      
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233

Query: 752 VEGDMEALNDIKCVEKLVMVSI-------WCIQEDPSLRPTMKKVLQ 791
            + +      +     L  +           ++ DP+ R T K+ L+
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  149 bits (378), Expect = 7e-41
 Identities = 47/297 (15%), Positives = 95/297 (31%), Gaps = 28/297 (9%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-THHKNL 581
               +G GSFG++++G  L        VA+K   R  +    + ++E            +
Sbjct: 9   VGRRIGEGSFGVIFEGTNLLNNQQ---VAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGI 63

Query: 582 VRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSA 641
             +  F  EG + +LV + L             K S       A Q+   +  +H     
Sbjct: 64  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EK 120

Query: 642 QIIHCDIKPQNILLDDYYN-----ARISDFGLAKLLTLNQSKAI-----RTAIRGTKGYV 691
            +++ DIKP N L+    +       + DFG+ K      +K       +  + GT  Y+
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 180

Query: 692 APEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           +         + + D+ + G + +  +     +            +   +  ++  L +L
Sbjct: 181 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPPNPYPF 808
             G           E+      +         P    +  +   V+E         F
Sbjct: 241 CAG---------FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENF 288

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 2e-40
 Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 32/279 (11%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE------KEFKNEVVVIGQT 576
             EE+G G F +V K    +T       A K + +            ++ + EV ++ + 
Sbjct: 14  TGEELGSGQFAVVKKCREKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            H N++ L    +   + +L+ E +  G L  FL      +    T    QI  G   ++
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG---VY 127

Query: 637 EDCSAQIIHCDIKPQNILLDDY----YNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVA 692
              S QI H D+KP+NI+L D        +I DFGLA  +           I GT  +VA
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVA 184

Query: 693 PEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV 752
           PE      +  + D++S GV+   ++S    F  +  +E           + +E   +  
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
                A + I+            + +DP  R T++  LQ
Sbjct: 245 A---LAKDFIR----------RLLVKDPKKRMTIQDSLQ 270

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (374), Expect = 3e-40
 Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 31/296 (10%)

Query: 519 ATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVV-- 572
           A   ++   E+G G++G V+K   L  +     VA+K++      +        EV V  
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDL--KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 62

Query: 573 -IGQTHHKNLVRLLGFC-----DEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIA 625
            +    H N+VRL   C     D      LV+E ++                     ++ 
Sbjct: 63  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 122

Query: 626 FQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           FQ+ RGL +LH   S +++H D+KPQNIL+      +++DFGLA++ +   +    T++ 
Sbjct: 123 FQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVV 176

Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE------YAILTDWA 739
            T  Y APE    S+    VD++S G +  E+   +  F      +        I     
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236

Query: 740 FDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSI----WCIQEDPSLRPTMKKVLQ 791
            D  R+  L         A    K V  +  +       C+  +P+ R +    L 
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 5e-40
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 26/289 (8%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKL--DRVFQDGEKEFKNEVVVIGQT 576
           +NF+  E++G G++G+VYK     T      VA+KK+  D   +        E+ ++ + 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEV---VALKKIRLDTETEGVPSTAIREISLLKEL 58

Query: 577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP-SWNLRTNIAFQIARGLLYL 635
           +H N+V+LL          LV+EFL+           L      L  +  FQ+ +GL + 
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H      ++H D+KPQN+L++     +++DFGLA+   +       T    T  Y APE 
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEI 173

Query: 696 FRNS-TITAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL--------TDWAFDCYR 744
                  +  VD++S G +  E+++ R  F  D E+ + + I           W      
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233

Query: 745 NEKLDDLVEGDMEALNDI--KCVEKLVMVSIWCIQEDPSLRPTMKKVLQ 791
            +      +   +  + +     E    +    +  DP+ R + K  L 
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (373), Expect = 1e-39
 Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 31/320 (9%)

Query: 518 EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIG 574
           +    +     +G G++G+V        +     VA+KK+     Q   +    E+ ++ 
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKV---RVAIKKISPFEHQTYCQRTLREIKILL 61

Query: 575 QTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKP---SWNLRTNIAFQIARG 631
           +  H+N++ +           +   +L    + + L+  LK    S +      +QI RG
Sbjct: 62  RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 121

Query: 632 LLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK-AIRTAIRGTKGY 690
           L Y+H   SA ++H D+KP N+LL+   + +I DFGLA++   +       T    T+ Y
Sbjct: 122 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178

Query: 691 VAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEE-----YAILTDWAFDCYR 744
            APE   NS   T  +D++S G +L E++S R  F  +   +       IL   + +   
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238

Query: 745 NEKLDDLVEGDMEALNDIKCVEKLVMVSI---------WCIQEDPSLRPTMKKVLQ---M 792
                      +   +  K     +  +            +  +P  R  +++ L    +
Sbjct: 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 298

Query: 793 LEGVVEVSLPPNPYPFSSSM 812
            +       P    PF   M
Sbjct: 299 EQYYDPSDEPIAEAPFKFDM 318

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 2e-37
 Identities = 53/295 (17%), Positives = 108/295 (36%), Gaps = 34/295 (11%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG--EKEFKNEVVVIGQTHHKNLV 582
            ++G+G+FG V+K     T      VA+KK+    +          E+ ++    H+N+V
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQK---VALKKVLMENEKEGFPITALREIKILQLLKHENVV 72

Query: 583 RLLGFCDEGQNR--------LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLY 634
            L+  C    +          LV++F  +          +K + +    +   +  GL  
Sbjct: 73  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL-- 130

Query: 635 LHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS--KAIRTAIRGTKGYVA 692
            +     +I+H D+K  N+L+      +++DFGLA+  +L ++      T    T  Y  
Sbjct: 131 -YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189

Query: 693 PEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIE--------MGEEYAILTDWAFDCY 743
           PE           +D++  G ++ E+ +                + +    +T   +   
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 249

Query: 744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIW-------CIQEDPSLRPTMKKVLQ 791
            N +L + +E        +K   K  +   +        +  DP+ R      L 
Sbjct: 250 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 3e-37
 Identities = 62/305 (20%), Positives = 114/305 (37%), Gaps = 34/305 (11%)

Query: 509 PCFSYKELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKN 568
           P       +E +    + +G GSFG+VY+  +  +      VA+KK+ +     ++    
Sbjct: 10  PGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE---LVAIKKVLQ----DKRFKNR 62

Query: 569 EVVVIGQTHHKNLVRLLGFCDEGQNR------LLVYEFLNNGTLASFLFGNLKP---SWN 619
           E+ ++ +  H N+VRL  F      +       LV +++           +         
Sbjct: 63  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122

Query: 620 LRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSK 678
                 +Q+ R L Y+H   S  I H DIKPQN+LLD D    ++ DFG AK L   + +
Sbjct: 123 YVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGE 177

Query: 679 AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIE----------- 727
              + I           F  +  T+ +DV+S G +L E++  +  F  +           
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

Query: 728 -MGEEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTM 786
            +G             Y   K   +       +   +   + + +    ++  P+ R T 
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297

Query: 787 KKVLQ 791
            +   
Sbjct: 298 LEACA 302

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 4e-37
 Identities = 53/282 (18%), Positives = 108/282 (38%), Gaps = 22/282 (7%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD--GEKEFKNEVVVIGQTHHKNLV 582
           E++G G++G V+K     T      VA+K++     D         E+ ++ +  HKN+V
Sbjct: 8   EKIGEGTYGTVFKAKNRETHE---IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64

Query: 583 RLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQ 642
           RL       +   LV+EF +      F   N      +  +  FQ+ +GL + H      
Sbjct: 65  RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--- 121

Query: 643 IIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTIT 702
           ++H D+KPQN+L++     ++++FGLA+   +         +           F     +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE-VVTLWYRPPDVLFGAKLYS 180

Query: 703 AKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN 760
             +D++S G +  E+ +  +      ++ ++   +          +        D +   
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240

Query: 761 DIKCVEKLVMVSI-----------WCIQEDPSLRPTMKKVLQ 791
                  LV V               ++ +P  R + ++ LQ
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-35
 Identities = 60/276 (21%), Positives = 100/276 (36%), Gaps = 36/276 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQ 575
           ++F   + +G+G+FG V       T       A+K L +     +D       E  V+  
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRY---YAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
           T H  L  L            V E+ N G L   L      +         +I   L   
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL--- 118

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
               S  +++ DIK +N++LD   + +I+DFGL K    + +        GT  Y+APE 
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 176

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILT-DWAFDCYRNEKLDDLV 752
             ++     VD +  GV++ E++  R  F  +  E     IL  +  F    + +   L+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLL 236

Query: 753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK 788
            G                     +++DP  R     
Sbjct: 237 AG--------------------LLKKDPKQRLGGGP 252

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 4e-35
 Identities = 78/333 (23%), Positives = 130/333 (39%), Gaps = 44/333 (13%)

Query: 511 FSYKELEEATDNFK------EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE- 563
           F  +E+ +     +      + VG G++G V   V   T      VA+KKL R FQ    
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGA---KVAIKKLYRPFQSELF 60

Query: 564 -KEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR------LLVYEFLNNGTLASFLFGNLKP 616
            K    E+ ++    H+N++ LL      +         LV  F+  GT    L  + K 
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKL 118

Query: 617 SWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ 676
             +    + +Q+ +GL Y+H   +A IIH D+KP N+ +++    +I DFGLA+     Q
Sbjct: 119 GEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----Q 170

Query: 677 SKAIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 735
           + +  T    T+ Y APE   N    T  VD++S G ++ E+I+ +  F      +    
Sbjct: 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 230

Query: 736 TDWAFDCYRNEKLDDLV-EGDMEALNDIKCVEKLVMVSIW-------------CIQEDPS 781
                     E +  L  +     +  +  +EK    SI               +  D  
Sbjct: 231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE 290

Query: 782 LRPTMKKVLQM--LEGVVEVSLPPNPYPFSSSM 812
            R T  + L     E + +    P    +  S 
Sbjct: 291 QRVTAGEALAHPYFESLHDTEDEPQVQKYDDSF 323

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  131 bits (329), Expect = 8e-34
 Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 38/281 (13%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKE---FKNEVVVIGQ 575
           D F   + +G GSFG V       +       A+K LD+      K+     NE  ++  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGN---HYAMKILDKQKVVKLKQIEHTLNEKRILQA 97

Query: 576 THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
            +   LV+L     +  N  +V E++  G + S L    + S       A QI     YL
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157

Query: 636 HEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEW 695
           H   S  +I+ D+KP+N+L+D     +++DFG AK     + K     + GT   +APE 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEI 209

Query: 696 FRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD 755
             +      VD ++ GVL+ E+ +    F  +   +        ++   + K+       
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-------IYEKIVSGKVRFPSHFS 262

Query: 756 MEALNDIKCVEKLVMVSIWCIQEDP-----SLRPTMKKVLQ 791
            +  + ++            +Q D      +L+  +  +  
Sbjct: 263 SDLKDLLR----------NLLQVDLTKRFGNLKNGVNDIKN 293

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 9e-34
 Identities = 59/277 (21%), Positives = 111/277 (40%), Gaps = 26/277 (9%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIG 574
           +NF+  + +G G++G V+    ++   +    A+K L +          +  + E  V+ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 575 Q-THHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLL 633
                  LV L           L+ +++N G L + L    + + +       +I   L 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 634 YLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAP 693
           +LH+     II+ DIK +NILLD   +  ++DFGL+K    ++++       GT  Y+AP
Sbjct: 144 HLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAP 199

Query: 694 EWFR--NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL 751
           +  R  +S     VD +S GVL+ E+++    F ++  +                +    
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---SQAEISRRILKSEPPYP 256

Query: 752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKK 788
            E    A + I+            + +DP  R     
Sbjct: 257 QEMSALAKDLIQ----------RLLMKDPKKRLGCGP 283

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 2e-32
 Identities = 70/329 (21%), Positives = 125/329 (37%), Gaps = 57/329 (17%)

Query: 525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGE--KEFKNEVVVIGQTHHKNLV 582
           + +G G+ GIV          +   VA+KKL R FQ+    K    E+V++   +HKN++
Sbjct: 23  KPIGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79

Query: 583 RLLGFC------DEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLH 636
            LL         +E Q+  LV E ++            +      + + +Q+  G+ +LH
Sbjct: 80  SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH 136

Query: 637 EDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWF 696
                 IIH D+KP NI++      +I DFGLA+      +  + T    T+ Y APE  
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 190

Query: 697 RNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM 756
                   VD++S G ++ E++  +  F    G +Y    +   +       + + +   
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247

Query: 757 EALNDIKCVEKLVMVSI----------------------------WCIQEDPSLRPTMKK 788
              N ++   K   ++                               +  DP+ R ++  
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307

Query: 789 VLQ-----MLEGVVEVSLPPNPYPFSSSM 812
            LQ     +     EV  PP P  +   +
Sbjct: 308 ALQHPYINVWYDPAEVEAPP-PQIYDKQL 335

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  125 bits (315), Expect = 4e-32
 Identities = 57/299 (19%), Positives = 117/299 (39%), Gaps = 43/299 (14%)

Query: 521 DNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQ-TH 577
           D+++   ++GRG +  V++ + +T       V VK L  V    +K+ K E+ ++     
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEK---VVVKILKPVK---KKKIKREIKILENLRG 88

Query: 578 HKNLVRLLGFCDEGQNRL--LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYL 635
             N++ L     +  +R   LV+E +NN             +        ++I + L Y 
Sbjct: 89  GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYC 145

Query: 636 HEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPE 694
           H      I+H D+KP N+++D ++   R+ D+GLA+     Q          ++ +  PE
Sbjct: 146 HSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPE 199

Query: 695 -WFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL-------TDWAFDCYRNE 746
                      +D++S G +L  +I  ++ F         ++       T+  +D     
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259

Query: 747 KLD-DLVEGDMEALNDIKCVEKLVMVSIW-------------CIQEDPSLRPTMKKVLQ 791
            ++ D    D+   +  K  E+ V                   ++ D   R T ++ ++
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 6e-32
 Identities = 73/334 (21%), Positives = 125/334 (37%), Gaps = 42/334 (12%)

Query: 509 PCFSYKELE----EATDNFK--EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDG 562
           P F  +EL     E  + ++    VG G++G V       T      VAVKKL R FQ  
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL---RVAVKKLSRPFQSI 58

Query: 563 E--KEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----NRLLVYEFLNNGTLASFLFGNLK 615
              K    E+ ++    H+N++ LL      +     N + +   L    L + +    K
Sbjct: 59  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-K 117

Query: 616 PSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN 675
            + +    + +QI RGL Y+H      IIH D+KP N+ +++    +I DFGLA      
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA-----R 169

Query: 676 QSKAIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYA 733
            +    T    T+ Y APE   N       VD++S G ++ E+++ R  F      ++  
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229

Query: 734 ILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIW-------------CIQEDP 780
           ++                 E     +  +  + K+   +++              +  D 
Sbjct: 230 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS 289

Query: 781 SLRPTMKKVLQM--LEGVVEVSLPPNPYPFSSSM 812
             R T  + L         +    P   P+  S 
Sbjct: 290 DKRITAAQALAHAYFAQYHDPDDEPVADPYDQSF 323

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  110 bits (274), Expect = 1e-26
 Identities = 53/317 (16%), Positives = 103/317 (32%), Gaps = 54/317 (17%)

Query: 523 FKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLV 582
              ++G G F  V+    +   T    VA+K +    +   +  ++E+ ++ + +  +  
Sbjct: 17  LVRKLGWGHFSTVWLAKDMVNNTH---VAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNT 72

Query: 583 RLLGFCDEGQNRLLVY----------------EFLNNGTLASFLFGNLKPSWNLRTNIAF 626
           +          +LL +                    N       + +          I+ 
Sbjct: 73  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 132

Query: 627 QIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTLNQSKAIRTAIR 685
           Q+  GL Y+H  C   IIH DIKP+N+L++       +    +A L          T   
Sbjct: 133 QLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 190

Query: 686 GTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-----------AI 734
            T+ Y +PE    +      D++S   L+ E+I+    F+ + G  Y            +
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 250

Query: 735 LTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSI--------------------W 774
           L +      RN K           L +I  ++   +  +                     
Sbjct: 251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 310

Query: 775 CIQEDPSLRPTMKKVLQ 791
            +Q DP  R     ++ 
Sbjct: 311 MLQLDPRKRADAGGLVN 327

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 86.0 bits (212), Expect = 7e-20
 Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 30/208 (14%)

Query: 521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVK----------KLDRVFQDGEKEFKNEV 570
           D   + +G G    V+               VK          K+      G+  F    
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE----CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLA 57

Query: 571 VVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTN--IAFQI 628
           +   +   + L +L G           Y +  N  L   +         +     +   I
Sbjct: 58  IRSARNEFRALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMI 112

Query: 629 ARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTK 688
              +   +      I+H D+   N+L+ +     I DF  +    + +        R  +
Sbjct: 113 LEEVAKFYHRG---IVHGDLSQYNVLVSE-EGIWIIDFPQSV--EVGEEGWREILERDVR 166

Query: 689 GYVAPEWFRNSTITAKVDVYSFGVLLLE 716
                 +F  +    + D+ S    +L+
Sbjct: 167 --NIITYFSRTY-RTEKDINSAIDRILQ 191

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 53.8 bits (129), Expect = 2e-09
 Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 27/129 (20%)

Query: 72  SIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVA 131
           SI YS          T +  Q        ++ +  D  LVL D   +   ++    GT  
Sbjct: 11  SILYSTQGNDNHPQ-TLHATQ-SLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGC 68

Query: 132 VGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFR 191
              +   G   + ++ +  +W S +                         + S GR+ F 
Sbjct: 69  RAVLQPNGRMDVLTNQNIAVWTSGN-------------------------SRSAGRYVFV 103

Query: 192 LLKDGNLVL 200
           L  D NL +
Sbjct: 104 LQPDRNLAI 112

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 27/144 (18%), Positives = 43/144 (29%), Gaps = 35/144 (24%)

Query: 135 MNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLK 194
           + + GN +L S+  +       N   TL   Q+                    ++  +  
Sbjct: 5   VANNGNSILYSTQGND------NHPQTLHATQS---------------LQLSPYRLSMET 43

Query: 195 DGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTT 254
           D NLVL        D  D  + + T        +G R +   +G M +L           
Sbjct: 44  DCNLVLF-------DRDDRVWSTNTA----GKGTGCRAVLQPNGRMDVLTNQNIA---VW 89

Query: 255 ESVVPAADFYYRATLNFDGVFAQY 278
            S    +   Y   L  D   A Y
Sbjct: 90  TSGNSRSAGRYVFVLQPDRNLAIY 113

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 53.0 bits (127), Expect = 3e-09
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 25/126 (19%)

Query: 33  GATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQ 92
           G  L AG +          + F            +L L    Y +    T VW ++    
Sbjct: 7   GEGLYAGQSLD-----VEPYHFIM------QEDCNLVL----YDH---STSVWASNT--- 45

Query: 93  NPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKL 151
                +G +  L +D   V+ D +G+ +W+S    G    V  + + GN V+  S    +
Sbjct: 46  GILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---I 102

Query: 152 WDSFSN 157
           W + + 
Sbjct: 103 WSTGTY 108

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 20/119 (16%), Positives = 32/119 (26%), Gaps = 22/119 (18%)

Query: 160 DTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT 219
           + L  G+ +   Q L             + F + +D NLVL        D   + + S T
Sbjct: 2   NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVLY-------DHSTSVWASNT 45

Query: 220 YDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQY 278
                      + +    G   +             S     +  Y   L  DG    Y
Sbjct: 46  GILGKKG---CKAVLQSDGNFVVYDAE---GRSLWASHSVRGNGNYVLVLQEDGNVVIY 98

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 28/129 (21%)

Query: 72  SIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVA 131
           +I +      +    T +  Q        +  + +D  LVL D    +VW+S     T  
Sbjct: 2   NILFGLSHEGSHPQ-TLHAAQ-SLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGATGC 58

Query: 132 VGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFR 191
              +   G  V+ ++ ++  W S                          T  S G +   
Sbjct: 59  RAVLQSDGLLVILTAQNTIRWSSG-------------------------TKGSIGNYVLV 93

Query: 192 LLKDGNLVL 200
           L  D  + +
Sbjct: 94  LQPDRTVTI 102

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 45.9 bits (108), Expect = 1e-06
 Identities = 29/141 (20%), Positives = 43/141 (30%), Gaps = 30/141 (21%)

Query: 159 SDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISG 218
           SD L  G  ++T   L           G + F +  D NLVL        D   A + SG
Sbjct: 1   SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLY-------DNNRAVWASG 44

Query: 219 TYDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQY 278
           T        SG  +     G + I   +         S     +  Y   L  D     Y
Sbjct: 45  TNGK----ASGCVLKMQNDGNLVIYSGSRA----IWASNTNRQNGNYYLILQRDRNVVIY 96

Query: 279 FYPKNGNENWSVAWSEPENIC 299
                 + + +  W+   N+ 
Sbjct: 97  ------DNSNNAIWATHTNVG 111

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 44.4 bits (104), Expect = 3e-06
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 22/132 (16%)

Query: 29  TVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTD 88
            +  G  L  G + +      G + F       + N        + Y N      VW + 
Sbjct: 3   RLNSGHQLDTGGSLA-----EGGYLFII---QNDCNL-------VLYDN---NRAVWASG 44

Query: 89  NKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSS 148
              +      G  +K+  D  LV+         S+           +    N V+  +S+
Sbjct: 45  TNGKA----SGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSN 100

Query: 149 SKLWDSFSNPSD 160
           + +W + +N  +
Sbjct: 101 NAIWATHTNVGN 112

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 28/130 (21%)

Query: 160 DTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGT 219
           + L  G+T+ T + L           G F F + +D NLVL        D     + + T
Sbjct: 2   NILYSGETLSTGEFLNY---------GSFVFIMQEDCNLVLY-------DVDKPIWATNT 45

Query: 220 YDPANSSNSGYRVMFNESGYMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYF 279
              + S      +     G + +             S     +  Y   L  D     Y 
Sbjct: 46  GGLSRSC----FLSMQTDGNLVVY---NPSNKPIWASNTGGQNGNYVCILQKDRNVVIY- 97

Query: 280 YPKNGNENWS 289
               G + W+
Sbjct: 98  ----GTDRWA 103

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 26/132 (19%)

Query: 27  NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWY 86
           +  +  G TL+ G   +      G F F  +      + N    L ++  + P    +W 
Sbjct: 1   DNILYSGETLSTGEFLN-----YGSFVFIMQ-----EDCN----LVLYDVDKP----IWA 42

Query: 87  TDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVA-VGHMNDTGNFVLAS 145
           T+    +    R   + +  D  LV+ +P  K +W+S         V  +    N V+  
Sbjct: 43  TNTGGLS----RSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYG 98

Query: 146 SSSSKLWDSFSN 157
           +     W + ++
Sbjct: 99  TD---RWATGTH 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	813
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.82
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.8
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.79
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.79
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.71
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.63
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.52
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.28
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.13
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.12
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.09
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.03
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.81
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.94
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.34
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.01
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.01
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.9
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.71
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.3
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	81.08
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	80.85
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	80.15

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-48  Score=414.18  Aligned_cols=271  Identities=24%  Similarity=0.442  Sum_probs=208.3

Q ss_pred             CCCCHHHHHHHHhhc-----------ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeecc
Q 045343          509 PCFSYKELEEATDNF-----------KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT  576 (813)
Q Consensus       509 ~~~~~~el~~~~~~~-----------~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l  576 (813)
                      ..++|+++..++.+|           .++||+|+||+||+|.+..+......||||++.... ....++|.+|+++|+++
T Consensus         5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l   84 (299)
T d1jpaa_           5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF   84 (299)
T ss_dssp             CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence            456777777777665           357999999999999986555556689999986532 33446799999999999


Q ss_pred             ccCCcceEEeEeecCCceEEEEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEE
Q 045343          577 HHKNLVRLLGFCDEGQNRLLVYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILL  655 (813)
Q Consensus       577 ~h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll  655 (813)
                      +|||||+++|+|.+++..++||||+++|+|.+++... ..++|..+++++.|||+||.|||+   .+|+||||||+||||
T Consensus        85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl  161 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILV  161 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEE
Confidence            9999999999999999999999999999999988764 578999999999999999999996   499999999999999


Q ss_pred             cCCCCEEEeeccCccccccCcccce---eecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchh
Q 045343          656 DDYYNARISDFGLAKLLTLNQSKAI---RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEE  731 (813)
Q Consensus       656 ~~~~~~kl~DfGla~~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~  731 (813)
                      +.++.+||+|||+++.+........   .....||+.|+|||.+.+..++.++|||||||+||||+| |+.||......+
T Consensus       162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999998765433211   122457899999999999999999999999999999998 899997543322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .   ...+    ..+         .......++++.+.+|+.+||+.||.+||||.||++.|+.+++
T Consensus       242 ~---~~~i----~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         242 V---INAI----EQD---------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             H---HHHH----HTT---------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             H---HHHH----HcC---------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            1   1111    111         1111223456788999999999999999999999999998765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-48  Score=401.88  Aligned_cols=254  Identities=27%  Similarity=0.430  Sum_probs=197.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      +++.++||+|+||+||+|.+.    ++..||||+++.. ....++|.+|++++++++|||||+++|+|.+++..++||||
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWL----NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEET----TTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cEEEEEEeeCCCeEEEEEEEC----CCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            567889999999999999874    4567999999753 33456899999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++|+|.+++... ..+++..+++++.|||+||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~  158 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  158 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC------------
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCcee
Confidence            9999999998754 5688999999999999999999964   99999999999999999999999999998775443322


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....||..|+|||++.+..++.++|||||||++|||+|+..|+.......  .+...+....      ..       .
T Consensus       159 -~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~--~~~~~i~~~~------~~-------~  222 (263)
T d1sm2a_         159 -STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF------RL-------Y  222 (263)
T ss_dssp             -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH--HHHHHHHHTC------CC-------C
T ss_pred             -ecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH--HHHHHHHhcC------CC-------C
Confidence             334568999999999999999999999999999999999544443322211  1111111110      01       1


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+..+++++.+++.+||+.||++||||+||+++|+++.+
T Consensus       223 ~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         223 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            112335678999999999999999999999999998753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=397.49  Aligned_cols=252  Identities=27%  Similarity=0.376  Sum_probs=205.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++... ....+++.+|++++++++|||||++++++.+++..+||||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNR---VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            677899999999999999874   357899999986532 2334678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++|+|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+|+.........
T Consensus        84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            999999999998888999999999999999999999964   99999999999999999999999999999876554433


Q ss_pred             eeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                      .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... ..    .......         .
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~-~~----~~~~~~~---------~  226 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SD----WKEKKTY---------L  226 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH-HH----HHTTCTT---------S
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH-HH----HhcCCCC---------C
Confidence            3456789999999999988776 578999999999999999999997544322111 00    0000000         0


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ......++.+.+|+.+||+.||++|||++|++++
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         227 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0111234677899999999999999999999764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-48  Score=402.68  Aligned_cols=258  Identities=28%  Similarity=0.403  Sum_probs=200.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+.+.++||+|+||+||+|...      ..||||+++..  .....++|.+|+.++++++|||||++++++.+ ...++|
T Consensus         9 ~~~~~~~lG~G~fg~Vy~~~~~------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv   81 (276)
T d1uwha_           9 QITVGQRIGSGSFGTVYKGKWH------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV   81 (276)
T ss_dssp             CCCCCSEEEECSSCEEEEEESS------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             cEEEEEEEeeCCCcEEEEEEEC------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence            4567789999999999999752      24999998643  23345679999999999999999999999865 568999


Q ss_pred             EeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++... ..+++..++.++.|||+||+|||+   .+|+||||||+||||+.++.+||+|||+|+......
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            9999999999999754 568999999999999999999995   499999999999999999999999999998876544


Q ss_pred             ccceeecccccccccCcccccCC---CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNS---TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      .........||+.|+|||++.+.   .++.++|||||||+||||+||+.||..........  .........        
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~--~~~~~~~~~--------  228 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII--FMVGRGYLS--------  228 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH--HHHHHTSCC--------
T ss_pred             CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHH--HHHhcCCCC--------
Confidence            33334556799999999998643   47899999999999999999999997544322111  111111111        


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      +... .....+++.+.+++.+||+.||.+||||+||+++|+.+.+
T Consensus       229 p~~~-~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         229 PDLS-KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCGG-GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Ccch-hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1110 1122346789999999999999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7e-48  Score=406.35  Aligned_cols=261  Identities=29%  Similarity=0.435  Sum_probs=213.5

Q ss_pred             HHHHHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCce
Q 045343          515 ELEEATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       515 el~~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      |+....+++.++||+|+||+||+|...   ..++.||||+++.. ....++|.+|+++|++++|||||+++++|.+++..
T Consensus        13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (287)
T d1opja_          13 EMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   88 (287)
T ss_dssp             BCCGGGEEEEEETTTTTTSSEEEEEEG---GGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             EecHHHeEEeeEEeeCCCeEEEEEEEC---CCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCee
Confidence            444556778899999999999999884   35788999999754 33456799999999999999999999999999999


Q ss_pred             EEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          595 LLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ++||||+++|+|.+++...  ..+++..++.++.||++||+|||+.   +|+||||||+||||+.++.+||+|||+|+..
T Consensus        89 ~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_          89 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred             EEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeec
Confidence            9999999999999999653  5789999999999999999999964   9999999999999999999999999999987


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..+.... .....|++.|+|||++.+..++.++|||||||++|||++|..|+........  +    ......+      
T Consensus       166 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~--~----~~~i~~~------  232 (287)
T d1opja_         166 TGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V----YELLEKD------  232 (287)
T ss_dssp             CSSSSEE-ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H----HHHHHTT------
T ss_pred             CCCCcee-eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH--H----HHHHhcC------
Confidence            6543322 3345688999999999999999999999999999999998777654332211  1    1111111      


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                         .........++.+.+|+.+||+.||++||||+||++.|+.+.+
T Consensus       233 ---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         233 ---YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             ---CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               1111122345789999999999999999999999999988754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=401.62  Aligned_cols=253  Identities=32%  Similarity=0.469  Sum_probs=204.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+++.++||+|+||+||+|.+.    ++..||||+++.. ....++|.+|+.++++++|||||+++|++.+ +..++||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~   86 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET----TTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC----CCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence            45677899999999999999874    4678999999754 3345679999999999999999999998855 5679999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.+++...  ..+++..+++|+.||++||.|||+.   +|+||||||+||||++++.+||+|||+|+.+....
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCc
Confidence            999999999988654  3689999999999999999999964   99999999999999999999999999999876543


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ... .....||+.|+|||++.+..++.++|||||||++|||+||..|+........  +...    +..+         .
T Consensus       164 ~~~-~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~--~~~~----i~~~---------~  227 (272)
T d1qpca_         164 YTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQN----LERG---------Y  227 (272)
T ss_dssp             EEC-CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH----HHTT---------C
T ss_pred             ccc-ccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH--HHHH----HHhc---------C
Confidence            222 3445789999999999998999999999999999999997666543322211  1111    1111         0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ....+...++.+.+|+.+||+.||++||||+||+++|+.+
T Consensus       228 ~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            1111123456789999999999999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=387.73  Aligned_cols=251  Identities=26%  Similarity=0.408  Sum_probs=209.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      ++|.++||+|+||+||+|...    ++..||||+++.. ....++|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWR----GQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEET----TTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             CEEeEEEecCCCeEEEEEEEC----CCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence            457899999999999999973    5678999999864 33457899999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++|+|.+++.. ...+++..+++++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        81 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~  157 (258)
T d1k2pa_          81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS  157 (258)
T ss_dssp             CTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCC
T ss_pred             cCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCcee
Confidence            999999999765 46788999999999999999999964   99999999999999999999999999998766543322


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEA  758 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  758 (813)
                       .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+..   .    .+....  .+       
T Consensus       158 -~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~---~----~i~~~~--~~-------  220 (258)
T d1k2pa_         158 -SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA---E----HIAQGL--RL-------  220 (258)
T ss_dssp             -CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---H----HHHTTC--CC-------
T ss_pred             -ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH---H----HHHhCC--CC-------
Confidence             334668999999999999999999999999999999998 89999765433211   1    111110  01       


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          759 LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       759 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                      ..+...++.+.+++.+||+.||++|||++||+++|.++
T Consensus       221 ~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         221 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            11123356889999999999999999999999999764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=389.10  Aligned_cols=245  Identities=27%  Similarity=0.376  Sum_probs=206.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|++.++||+|+||+||+|...   .+++.||||++....   ....+++.+|++++++++|||||++++++.+++..++
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREK---QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEEC---CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence            3778899999999999999874   467899999986432   2334578899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+|+......
T Consensus        84 vmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~  160 (263)
T d2j4za1          84 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  160 (263)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred             EEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence            99999999999999988889999999999999999999995   499999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....||+.|+|||++.+..++.++|||||||+||||++|+.||......+..       ........        
T Consensus       161 ----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~-------~~i~~~~~--------  221 (263)
T d2j4za1         161 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY-------KRISRVEF--------  221 (263)
T ss_dssp             ----CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-------HHHHTTCC--------
T ss_pred             ----ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHH-------HHHHcCCC--------
Confidence                34467999999999999999999999999999999999999999755432211       11111110        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQ  791 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~  791 (813)
                      .  .+...++.+.+|+.+||+.||.+|||++|+++
T Consensus       222 ~--~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         222 T--FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C--CCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            0  01123567889999999999999999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=394.00  Aligned_cols=250  Identities=26%  Similarity=0.354  Sum_probs=207.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++.......+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~---~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDV---ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBT---TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEecCcCcEEEEEEEC---CCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence            3677789999999999999863   4678999999986655556679999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          600 FLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       600 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      |+++|+|.+++.. ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++++||+|||+++.+...... 
T Consensus        98 y~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~-  172 (293)
T d1yhwa1          98 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-  172 (293)
T ss_dssp             CCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred             ecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccccc-
Confidence            9999999998765 4689999999999999999999964   9999999999999999999999999999987544322 


Q ss_pred             eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEAL  759 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  759 (813)
                       .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........      ....... ..     .  .
T Consensus       173 -~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~------~~~~~~~-~~-----~--~  237 (293)
T d1yhwa1         173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGT-PE-----L--Q  237 (293)
T ss_dssp             -BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHCS-CC-----C--S
T ss_pred             -ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHH------HHHhCCC-CC-----C--C
Confidence             345679999999999999999999999999999999999999997544322111      1111100 00     0  1


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          760 NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       760 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .....++.+.+|+.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            112345778899999999999999999999874

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=394.02  Aligned_cols=250  Identities=29%  Similarity=0.404  Sum_probs=201.9

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEeecC
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLN  602 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~~~  602 (813)
                      ++||+|+||+||+|.+... ..++.||||+++....  ...++|.+|+++|++++|||||+++++|.+ +..+|||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECS-SSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccC-CcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCC
Confidence            4699999999999987543 3567899999965322  234579999999999999999999999965 56789999999


Q ss_pred             CCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc-ee
Q 045343          603 NGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA-IR  681 (813)
Q Consensus       603 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~  681 (813)
                      +|+|.+++.....+++..+++++.||++||+|||+.   +|+||||||+||||+.++.+||+|||+++.+....... ..
T Consensus        91 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            999999999888999999999999999999999964   99999999999999999999999999999876543322 12


Q ss_pred             ecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccccccc
Q 045343          682 TAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDMEALN  760 (813)
Q Consensus       682 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  760 (813)
                      ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+   +..    .+..+..         ...
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~---~~~----~i~~~~~---------~~~  231 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA----MLEKGER---------MGC  231 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH----HHHTTCC---------CCC
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH---HHH----HHHcCCC---------CCC
Confidence            34568999999999999999999999999999999998 899997543322   111    1111111         111


Q ss_pred             cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhc
Q 045343          761 DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEG  795 (813)
Q Consensus       761 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~  795 (813)
                      +..+++.+.+|+.+||+.||++|||+++|+++|+.
T Consensus       232 p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            22345788999999999999999999999998875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=404.86  Aligned_cols=259  Identities=24%  Similarity=0.374  Sum_probs=208.7

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCC--cceEEEEEEeecc-ccccchhhhheeeeeecc-ccCCcceEEeEeecCCc
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRT--STTAVAVKKLDRV-FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~--~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~  593 (813)
                      ...+++.++||+|+||+||+|.......  ....||||++... .......+.+|+.+|.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3456788999999999999999864332  2457999998643 233456789999999998 89999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhcc-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCC
Q 045343          594 RLLVYEFLNNGTLASFLFGN-----------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKP  650 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~-----------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~  650 (813)
                      .++||||+++|+|.++|...                       ..+++..++.++.||++||+|||+.   +|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCch
Confidence            99999999999999999654                       2478999999999999999999964   999999999


Q ss_pred             CcEEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccc
Q 045343          651 QNILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMG  729 (813)
Q Consensus       651 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~  729 (813)
                      +|||++.++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999988766554433445678999999999999999999999999999999998 8999975443


Q ss_pred             hhhhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHh
Q 045343          730 EEYAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLE  794 (813)
Q Consensus       730 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~  794 (813)
                      ...  +..    ....         ......+...++.+.+|+.+||+.||++|||++||+++|.
T Consensus       273 ~~~--~~~----~~~~---------~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 DAN--FYK----LIQN---------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SHH--HHH----HHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH--HHH----HHhc---------CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            221  111    1111         1111122234678999999999999999999999999995

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=389.00  Aligned_cols=248  Identities=27%  Similarity=0.419  Sum_probs=198.2

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec----CCceE
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE----GQNRL  595 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----~~~~~  595 (813)
                      +|.++||+|+||+||+|...   .++..||||++....  ....+.+.+|+++|++++|||||++++++.+    ....+
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~---~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDT---ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             EeeeEEecCcCcEEEEEEEC---CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEE
Confidence            56788999999999999874   356789999986532  2234568999999999999999999999864    34579


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc-CCCCEEEeeccCcccccc
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD-DYYNARISDFGLAKLLTL  674 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~-~~~~~kl~DfGla~~~~~  674 (813)
                      +||||+++|+|.+++.....+++..++.++.||++||+|||+. ..+|+||||||+||||+ +++.+||+|||+|+....
T Consensus        89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999999999888999999999999999999999965 23499999999999996 578999999999986543


Q ss_pred             CcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                      ..    .....||+.|+|||++.+ +++.++|||||||++|||++|+.||........  +    ......+....    
T Consensus       168 ~~----~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~----~~~i~~~~~~~----  232 (270)
T d1t4ha_         168 SF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--I----YRRVTSGVKPA----  232 (270)
T ss_dssp             TS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--H----HHHHTTTCCCG----
T ss_pred             Cc----cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--H----HHHHHcCCCCc----
Confidence            32    335679999999999875 599999999999999999999999975433211  1    11111111100    


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .    ......+.+.+|+.+||+.||++|||++|++++
T Consensus       233 ~----~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         233 S----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             G----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             c----cCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            0    111234568899999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=404.08  Aligned_cols=266  Identities=20%  Similarity=0.298  Sum_probs=206.8

Q ss_pred             HHHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          518 EATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       518 ~~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      ...|++.++||+|+||+||+|...   .++..||||+++.... ...+++.+|+.+|++++|||||+++++|.++++.++
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHK---PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEET---TTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            345677899999999999999874   4678999999975432 234578999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..+..++.||+.||.|||+.  .+|+||||||+||||+.++.+||+|||+|+......
T Consensus        82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  159 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  159 (322)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc
Confidence            999999999999999888899999999999999999999952  389999999999999999999999999998765432


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHH-HHhh------------
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA-FDCY------------  743 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~-~~~~------------  743 (813)
                          ....+||+.|+|||++.+.+++.++||||+||++|||++|+.||......+........ ....            
T Consensus       160 ----~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (322)
T d1s9ja_         160 ----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  235 (322)
T ss_dssp             ----C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------
T ss_pred             ----cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccc
Confidence                23468999999999999999999999999999999999999999765432211100000 0000            


Q ss_pred             --cc--------Ccccc----cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 --RN--------EKLDD----LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 --~~--------~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ..        ....+    +.............+.++.+++.+||+.||.+|||++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             ----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence              00        00000    000000000111234678899999999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-46  Score=397.23  Aligned_cols=261  Identities=24%  Similarity=0.433  Sum_probs=201.7

Q ss_pred             hhcccccceeeeeeEEEEEEeccC-CcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      +.+.+.||+|+||+||+|.+..+. .....||||+++.... ...++|.+|++++++++|||||+++|++.+.+..++||
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~   88 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT   88 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence            456788999999999999986433 2235799999865332 23456899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+.+++|.+++... ..++|..+++++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++.+.....
T Consensus        89 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          89 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            999999999987654 6789999999999999999999964   999999999999999999999999999998754432


Q ss_pred             cc-eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KA-IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~-~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .. ......||+.|+|||++.+..++.++|||||||++|||+++..|+........  +.    ..+..+         .
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~--~~----~~i~~~---------~  230 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VM----KAINDG---------F  230 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HH----HHHHTT---------C
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH--HH----HHHhcc---------C
Confidence            21 12345689999999999999999999999999999999997666654332211  11    111111         1


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                      +...+..++..+.+|+.+||+.||++||||.||+++|+.+++.
T Consensus       231 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         231 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            1112223457889999999999999999999999999987754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-46  Score=392.35  Aligned_cols=250  Identities=23%  Similarity=0.320  Sum_probs=205.9

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |++.++||+|+||+||+|...   .++..||||+++.......+++.+|+++|++++|||||++++++.+++..++||||
T Consensus        14 Y~i~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          14 WEIIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEeEEEeeCCCcEEEEEEEC---CCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            677889999999999999874   46788999999876666678899999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcccc
Q 045343          601 LNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSKA  679 (813)
Q Consensus       601 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~  679 (813)
                      +++|+|.+++.. ...+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+|+........ 
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~-  166 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-  166 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH-
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCccc-
Confidence            999999999765 45689999999999999999999965   9999999999999999999999999999865433211 


Q ss_pred             eeecccccccccCccccc-----CCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccc
Q 045343          680 IRTAIRGTKGYVAPEWFR-----NSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEG  754 (813)
Q Consensus       680 ~~~~~~gt~~y~aPE~l~-----~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  754 (813)
                       .....||+.|+|||++.     ...++.++|||||||++|||++|+.||......+...      .... .....+   
T Consensus       167 -~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~------~i~~-~~~~~~---  235 (288)
T d2jfla1         167 -RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL------KIAK-SEPPTL---  235 (288)
T ss_dssp             -HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH------HHHH-SCCCCC---
T ss_pred             -ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHH------HHHc-CCCCCC---
Confidence             23467999999999984     4567899999999999999999999997654322110      1111 111111   


Q ss_pred             cccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          755 DMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       755 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                          ......++.+.+|+.+||+.||.+|||++|++++
T Consensus       236 ----~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         236 ----AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             ----SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ----CccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                1112345788999999999999999999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=394.90  Aligned_cols=260  Identities=28%  Similarity=0.408  Sum_probs=204.2

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      ..+++.++||+|+||+||+|.+.    ++..||||+++.. ....++|.+|+.++++++|+|||+++++|.+ +..++||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~----~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~   90 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   90 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET----TTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEEC----CCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEE
Confidence            35788899999999999999874    4457999999754 3445689999999999999999999999854 5689999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.+++...  ..++|..++.++.||++||+|||+.   +|+||||||+||||+.++++||+|||+++......
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  167 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence            999999999988653  5689999999999999999999965   99999999999999999999999999998775443


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ... .....||+.|+|||++....++.++||||||+++|||++|..|+........  +...+.    .+         .
T Consensus       168 ~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~--~~~~i~----~~---------~  231 (285)
T d1fmka3         168 YTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVE----RG---------Y  231 (285)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHH----TT---------C
T ss_pred             cee-eccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH--HHHHHH----hc---------C
Confidence            322 3445689999999999999999999999999999999997766654332211  111111    11         0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCCCCC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVSLPP  803 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~p~  803 (813)
                      ..+.....++++.+++.+||+.||++||+|++|+++|+.......|+
T Consensus       232 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~  278 (285)
T d1fmka3         232 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  278 (285)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCC
Confidence            11112234578899999999999999999999999999877665444

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=392.84  Aligned_cols=248  Identities=22%  Similarity=0.281  Sum_probs=203.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||+++...   ....+.+.+|++++++++|||||++++++.+++..++
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLAREL---ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEE
T ss_pred             CCEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEE
Confidence            3788899999999999999874   357889999987432   2334568999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+|+.+....
T Consensus        86 vmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          86 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCC
Confidence            999999999999999888999999999999999999999964   99999999999999999999999999999876544


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .........||+.|+|||++.+..++.++|||||||++|||++|+.||......+..       ........        
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~-------~~i~~~~~--------  227 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF-------QKIIKLEY--------  227 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHTTCC--------
T ss_pred             cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH-------HHHHcCCC--------
Confidence            333344567999999999999999999999999999999999999999865332211       11111111        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVL  790 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl  790 (813)
                      .  .+...++.+.+|+.+||+.||.+|||++|++
T Consensus       228 ~--~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         228 D--FPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             C--CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             C--CCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            0  0112356788999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-46  Score=389.30  Aligned_cols=254  Identities=28%  Similarity=0.405  Sum_probs=204.3

Q ss_pred             hccc-ccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          522 NFKE-EVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       522 ~~~~-~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .+.+ +||+|+||+||+|..... .++..||||+++.... ...++|.+|+++|++++|||||+++|++.+ +..+||||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~-~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE   88 (285)
T d1u59a_          11 LIADIELGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME   88 (285)
T ss_dssp             EEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred             EECCcEEecccCeEEEEEEEecC-CCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEE
Confidence            3445 599999999999987533 2456899999975432 335679999999999999999999999865 56899999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |+++|+|.+++.. +..+++..+++++.|||+||+|||+   .+|+||||||+||||+.++.+||+|||+++.+......
T Consensus        89 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          89 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence            9999999999765 4678999999999999999999995   49999999999999999999999999999987654322


Q ss_pred             -ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          679 -AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       679 -~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                       .......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+..       ..+..+...       
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~-------~~i~~~~~~-------  231 (285)
T d1u59a_         166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-------AFIEQGKRM-------  231 (285)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-------HHHHTTCCC-------
T ss_pred             cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHH-------HHHHcCCCC-------
Confidence             11234568999999999999999999999999999999998 99999755432211       111111111       


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                        ..+...++.+.+|+.+||+.||++||||.+|++.|+.+
T Consensus       232 --~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         232 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             --CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence              11223457889999999999999999999999998753

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-46  Score=387.12  Aligned_cols=252  Identities=23%  Similarity=0.337  Sum_probs=192.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec--CCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE--GQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~~  595 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||+++...  +...+.+.+|++++++++|||||++++++.+  +...+
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRK---SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred             hCEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence            3678899999999999999874   467899999986542  2234568899999999999999999999864  45689


Q ss_pred             EEEeecCCCchhhhhhc----cCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          596 LVYEFLNNGTLASFLFG----NLKPSWNLRTNIAFQIARGLLYLHEDC--SAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gl~yLH~~~--~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +||||+++|+|.+++..    ...+++..++.++.||+.||.|||+..  ..+|+||||||+||||+.++.+||+|||++
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a  161 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  161 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence            99999999999999864    357899999999999999999999752  235999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +.+..+...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.   ..    ........
T Consensus       162 ~~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~---~~----~i~~~~~~  232 (269)
T d2java1         162 RILNHDTSF--AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---AG----KIREGKFR  232 (269)
T ss_dssp             HHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HH----HHHHTCCC
T ss_pred             eecccCCCc--cccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH---HH----HHHcCCCC
Confidence            987644322  3456799999999999999999999999999999999999999975443221   11    11111111


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+         +...++.+.+|+.+||+.||.+|||++|++++
T Consensus       233 ~~---------~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         233 RI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             CC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            11         11345678999999999999999999999763

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-45  Score=390.82  Aligned_cols=260  Identities=25%  Similarity=0.392  Sum_probs=210.1

Q ss_pred             HhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.++||+|+||+||+|....  ...++..||||+++..... ..++|.+|++++++++|+||++++++|.+.+..++
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~   93 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL   93 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence            35678999999999999998753  2345678999999754332 34679999999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhcc------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCc
Q 045343          597 VYEFLNNGTLASFLFGN------------------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQN  652 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~N  652 (813)
                      ||||+++|+|.+++...                        ..+++..++.++.||+.||+|||+   .+|+||||||+|
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivHrDlKp~N  170 (301)
T d1lufa_          94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRN  170 (301)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEeeEEcccc
Confidence            99999999999998642                        237899999999999999999995   499999999999


Q ss_pred             EEEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC-cCCCcccchh
Q 045343          653 ILLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR-KSFDIEMGEE  731 (813)
Q Consensus       653 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~-~p~~~~~~~~  731 (813)
                      |||+.++.+||+|||+++.+.............+++.|+|||.+.+..++.++|||||||++|||++|. +||......+
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence            999999999999999998776554443344567899999999999999999999999999999999986 5665443322


Q ss_pred             hhhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          732 YAILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       732 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ..       ..+..+....         .+...+.++.+|+.+||+.||.+||||.||+++|+++.+
T Consensus       251 ~~-------~~v~~~~~~~---------~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         251 VI-------YYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HH-------HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HH-------HHHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11       1111111111         112345678999999999999999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-45  Score=390.09  Aligned_cols=247  Identities=24%  Similarity=0.303  Sum_probs=202.9

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc---ccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ---DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..|+..++||+|+||+||+|...   .+++.||||+++....   ...+++.+|+.+|++++|||||++++++.+++..+
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   91 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDV---RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW   91 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEEC---CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEE
Confidence            34677889999999999999874   4678999999875432   22356889999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|..++.....+++..++.++.||+.||.|||+.   +|+||||||+||||+.++.+||+|||+|+.....
T Consensus        92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (309)
T d1u5ra_          92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (309)
T ss_dssp             EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred             EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCC
Confidence            9999999999988888888899999999999999999999964   9999999999999999999999999999875432


Q ss_pred             cccceeecccccccccCcccccC---CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRN---STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~---~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                            ....||+.|+|||++.+   ..++.++|||||||++|||++|+.||......+.  +    ..... .....  
T Consensus       169 ------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~--~----~~i~~-~~~~~--  233 (309)
T d1u5ra_         169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L----YHIAQ-NESPA--  233 (309)
T ss_dssp             ------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--H----HHHHH-SCCCC--
T ss_pred             ------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH--H----HHHHh-CCCCC--
Confidence                  33569999999999864   4588999999999999999999999975432211  1    11111 11111  


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ......++.+.+|+.+||+.||.+|||++|++++
T Consensus       234 ------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         234 ------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             ------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence                  1112345788999999999999999999999863

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-45  Score=387.09  Aligned_cols=251  Identities=24%  Similarity=0.343  Sum_probs=191.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|++.++||+|+||+||+|...   .+++.||||++.... ....+.+.+|+.+|++++|||||++++++.+++..+|||
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDK---RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEET---TTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEeeccCeEEEEEEEC---CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4788899999999999999874   357889999987533 233456889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~~~~~  675 (813)
                      ||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+.   +++.+||+|||+++.....
T Consensus        87 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_          87 QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             CCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             eccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence            9999999999999888999999999999999999999964   999999999999994   5789999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   ..   ... ....      
T Consensus       164 ~~---~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~---~~---i~~-~~~~------  227 (307)
T d1a06a_         164 SV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF---EQ---ILK-AEYE------  227 (307)
T ss_dssp             ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HH---HHT-TCCC------
T ss_pred             Ce---eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHH---HH---Hhc-cCCC------
Confidence            22   33467999999999999999999999999999999999999999754432211   11   111 1100      


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .........++.+.+|+.+||+.||.+|||++|++++
T Consensus       228 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            0011112345778999999999999999999999985

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=387.32  Aligned_cols=258  Identities=24%  Similarity=0.357  Sum_probs=198.8

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-cchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      ..+++.+.||+|+||+||+|.....+..+..||||+++..... ..+.|.+|+.++++++|||||++++++. ++..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence            4577889999999999999998766556778999998654333 3456999999999999999999999996 4678999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+++|+|.+++.. ...+++..++.++.||++||.|||+.   +|+||||||+||+++.++.+||+|||+++.+....
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            999999999998765 45789999999999999999999964   99999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ... .....||+.|+|||.+.+..++.++|||||||++|||++ |.+||......+..   ..+    ..+...      
T Consensus       163 ~~~-~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~---~~i----~~~~~~------  228 (273)
T d1mp8a_         163 YYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---GRI----ENGERL------  228 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH---HHH----HTTCCC------
T ss_pred             cee-ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHH---HHH----HcCCCC------
Confidence            222 344568999999999999999999999999999999998 88888755432211   111    111111      


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                         ......++.+.+|+.+||+.||++|||+.||+++|+.++
T Consensus       229 ---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         229 ---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence               112234578999999999999999999999999998765

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-45  Score=381.20  Aligned_cols=247  Identities=26%  Similarity=0.386  Sum_probs=195.6

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeec-CCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-GQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~~lV~  598 (813)
                      .+++.++||+|+||.||+|..     .+..||||+++..  ...++|.+|++++++++|||||+++|+|.+ .+..++||
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~-----~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           8 ELKLLQTIGKGEFGDVMLGDY-----RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             GEEEEEEEEECSSCEEEEEEE-----TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             HeEEeEEEecCCCeEEEEEEE-----CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            356789999999999999987     4568999999753  445779999999999999999999999865 45689999


Q ss_pred             eecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          599 EFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       599 e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||+++|+|.++|...  ..++|..+++++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-  156 (262)
T d1byga_          81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  156 (262)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCC-
Confidence            999999999999754  358999999999999999999995   49999999999999999999999999999875533 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                          .....++..|+|||++.+..++.++||||||+++|||+| |+.|+.......   +...+    ..+.        
T Consensus       157 ----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~---~~~~i----~~~~--------  217 (262)
T d1byga_         157 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRV----EKGY--------  217 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHHHH----TTTC--------
T ss_pred             ----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH---HHHHH----HcCC--------
Confidence                223457899999999999999999999999999999998 677776543322   11111    1111        


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                       ........++++.+|+.+||+.||.+||||.||+++|+.+.
T Consensus       218 -~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         218 -KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -CCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence             11112234578899999999999999999999999998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-45  Score=387.66  Aligned_cols=261  Identities=25%  Similarity=0.479  Sum_probs=206.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecC-CceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG-QNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~~lV~  598 (813)
                      .+|.++||+|+||+||+|.+..++.....||||+++.. .....++|.+|+++|++++|||||+++|++.+. ...++||
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            35678899999999999998765545567999999753 333456799999999999999999999998754 5789999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+++|+|.+++... ...++..+++++.|+++||.|||+   .+|+||||||+||||++++.+||+|||+++.......
T Consensus       109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence            999999999998765 467788999999999999999995   4999999999999999999999999999998765432


Q ss_pred             cc--eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          678 KA--IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       678 ~~--~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ..  ......||+.|+|||.+.+..++.++||||||+++|||+||+.||.......  .+...+.    .+.  ...   
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~~i~----~g~--~~~---  254 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLL----QGR--RLL---  254 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHH----TTC--CCC---
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH--HHHHHHH----cCC--CCC---
Confidence            21  1234568999999999999999999999999999999999888876433211  1111111    111  011   


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                          .+...++.+.+|+.+||+.||++||+|.||+++|+.+.+-
T Consensus       255 ----~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         255 ----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                1122356789999999999999999999999999987643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.1e-44  Score=389.50  Aligned_cols=251  Identities=24%  Similarity=0.325  Sum_probs=207.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|++.++||+|+||+||+|...   .++..||||++........+.+.+|+.+|++++|||||++++++.+++..+||||
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~---~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE  103 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTER---ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  103 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            5788899999999999999874   4678999999976555556678999999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--CCCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--DYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++|+|.+++.. ...+++..++.++.||+.||.|||+.   +|+||||||+|||++  .++.+||+|||+++.+....
T Consensus       104 ~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         104 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             CCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred             cCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheeccccc
Confidence            9999999999864 46799999999999999999999964   999999999999996  46789999999998876443


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...   .+..    ....      .
T Consensus       181 ~---~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~---~i~~----~~~~------~  244 (350)
T d1koaa2         181 S---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR---NVKS----CDWN------M  244 (350)
T ss_dssp             C---EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHH----TCCC------S
T ss_pred             c---cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH---HHHh----CCCC------C
Confidence            2   345679999999999999999999999999999999999999997554322111   1110    0000      0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........++.+.+|+.+||+.||++|||++|++++
T Consensus       245 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         245 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            001111235678899999999999999999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.3e-44  Score=387.42  Aligned_cols=251  Identities=25%  Similarity=0.321  Sum_probs=207.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e  599 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+||||
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE  106 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEK---ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  106 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            4788899999999999999874   4678999999976544455678899999999999999999999999999999999


Q ss_pred             ecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc--CCCCEEEeeccCccccccCc
Q 045343          600 FLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD--DYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       600 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~--~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+++|+|.+++... ..+++..++.++.||+.||.|||+.   +|+||||||+||||+  .++.+||+|||+|+.+....
T Consensus       107 ~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         107 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             cCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCCC
Confidence            99999999887655 4689999999999999999999964   999999999999998  67899999999999876543


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      .   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   ..+.    .....      .
T Consensus       184 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~---~~i~----~~~~~------~  247 (352)
T d1koba_         184 I---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL---QNVK----RCDWE------F  247 (352)
T ss_dssp             C---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---HHHH----HCCCC------C
T ss_pred             c---eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH----hCCCC------C
Confidence            2   34467999999999999999999999999999999999999999755432211   1111    00000      0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ........+..+.+|+.+||+.||.+|||+.|++++
T Consensus       248 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         248 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            011112345678899999999999999999999885

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-45  Score=387.91  Aligned_cols=262  Identities=26%  Similarity=0.383  Sum_probs=199.3

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccC--CcceEEEEEEeeccc-cccchhhhheeeeeecc-ccCCcceEEeEeecC-Cc
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTR--TSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG-QN  593 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~--~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~~  593 (813)
                      ..+++.++||+|+||.||+|......  ..++.||||+++... ....+++..|..++.++ +|+|||.+++++.+. ..
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            45778899999999999999976432  345789999997532 23345677888888777 689999999998664 46


Q ss_pred             eEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC
Q 045343          594 RLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD  657 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~  657 (813)
                      .++||||+++|+|.+++...                ..+++..++.++.||++||+|||+.   +|+||||||+||||+.
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECG
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECC
Confidence            89999999999999999643                2478999999999999999999954   9999999999999999


Q ss_pred             CCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC-cCCCcccchhhhhhH
Q 045343          658 YYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR-KSFDIEMGEEYAILT  736 (813)
Q Consensus       658 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~-~p~~~~~~~~~~~l~  736 (813)
                      ++.+||+|||+|+...............||+.|+|||.+.+..++.++|||||||++|||++|. .||......+.  +.
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~--~~  247 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC  247 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH--HH
Confidence            9999999999998776554433344567999999999999999999999999999999999975 56754432211  11


Q ss_pred             HHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          737 DWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                          ..+..+....         .....++.+.+++.+||+.||++|||++||+++|+.+++
T Consensus       248 ----~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         248 ----RRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             ----HHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HHHhcCCCCC---------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                1111111111         111235678999999999999999999999999998764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-45  Score=379.87  Aligned_cols=258  Identities=26%  Similarity=0.357  Sum_probs=199.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .+++.+.||+|+||+||+|...........||||+++...   .+..++|.+|+.+|++++|||||+++|+|.+ ...++
T Consensus         9 d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~l   87 (273)
T d1u46a_           9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKM   87 (273)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             HeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchhe
Confidence            4677899999999999999987655566789999986532   2334579999999999999999999999965 46789


Q ss_pred             EEeecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ||||+++|+|.+++... ..+++..+++++.|||+||.|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccC
Confidence            99999999999887654 5789999999999999999999964   9999999999999999999999999999987654


Q ss_pred             cccce-eecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          676 QSKAI-RTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       676 ~~~~~-~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..... .....|+..|+|||.+.+..++.++||||||+++|||+| |+.||......+..   .   ......       
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~---~---~i~~~~-------  231 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL---H---KIDKEG-------  231 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---H---HHHTSC-------
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH---H---HHHhCC-------
Confidence            43221 233568889999999999999999999999999999998 89999754432211   1   111111       


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcC
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGV  796 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~  796 (813)
                        ...+.....+..+.+++.+||+.||++||||.||++.|++.
T Consensus       232 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         232 --ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence              11111223456789999999999999999999999999753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-44  Score=378.99  Aligned_cols=251  Identities=25%  Similarity=0.336  Sum_probs=205.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc------ccchhhhheeeeeeccccCCcceEEeEeecCCc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ------DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~  593 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++....      ...+.+.+|+.+|++++|||||++++++.+++.
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREK---STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CEEEeEEEecCCCeEEEEEEEC---CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            4788899999999999999874   4678999999865322      123568999999999999999999999999999


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----CEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----NARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----~~kl~DfGla  669 (813)
                      .+|||||+++|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++    .+||+|||++
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhh
Confidence            999999999999999999888999999999999999999999964   999999999999998776    5999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD  749 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  749 (813)
                      +.......   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+...      . .......
T Consensus       165 ~~~~~~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~------~-i~~~~~~  234 (293)
T d1jksa_         165 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------N-VSAVNYE  234 (293)
T ss_dssp             EECTTSCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------H-HHTTCCC
T ss_pred             hhcCCCcc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHH------H-HHhcCCC
Confidence            88754432   234568999999999999999999999999999999999999998654322110      0 0010000


Q ss_pred             ccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 DLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            .........+..+.+|+.+||+.||.+|||++|++++
T Consensus       235 ------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         235 ------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             ------CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ------CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  0000111235678899999999999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-44  Score=386.62  Aligned_cols=257  Identities=24%  Similarity=0.382  Sum_probs=202.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccC-CcceEEEEEEeecc-ccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTR-TSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.++||+|+||+||+|....+. .....||||+++.. ..+..++|.+|+.++++++|||||+++|+|.++ ..++++
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~   89 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT   89 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEE
Confidence            677899999999999999875432 12346899998653 334456899999999999999999999999864 577889


Q ss_pred             eecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          599 EFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       599 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      ||+.+|+|.+++.. ...+++..+++++.|||+||+|||+.   +|+||||||+||||+.++.+||+|||+++.......
T Consensus        90 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             ECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred             EeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence            99999999888765 46789999999999999999999964   999999999999999999999999999998765544


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ........||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+..   ..+..    +         .
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~---~~i~~----~---------~  230 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEK----G---------E  230 (317)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH---HHHHH----T---------C
T ss_pred             cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH---HHHHc----C---------C
Confidence            433445578999999999999999999999999999999999 78888754432211   11111    1         1


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ....+..+++.+.+++.+||+.||.+|||+.||+++|+.+.
T Consensus       231 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            11112234578899999999999999999999999987653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=386.04  Aligned_cols=264  Identities=25%  Similarity=0.402  Sum_probs=212.8

Q ss_pred             HHHHHhhcccccceeeeeeEEEEEEec--cCCcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecC
Q 045343          516 LEEATDNFKEEVGRGSFGIVYKGVILT--TRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEG  591 (813)
Q Consensus       516 l~~~~~~~~~~LG~G~fG~Vykg~~~~--~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~  591 (813)
                      +....+++.++||+|+||.||+|.+..  ....++.||||+++.... ....+|.+|+.+++++ +|||||+++++|.++
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            444567888999999999999998753  234678999999975432 2345688999999999 699999999999999


Q ss_pred             CceEEEEeecCCCchhhhhhccC------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcE
Q 045343          592 QNRLLVYEFLNNGTLASFLFGNL------------------KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNI  653 (813)
Q Consensus       592 ~~~~lV~e~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NI  653 (813)
                      +..++||||+++|+|.+++....                  .+++..+++++.||++||+|||.+   +|+||||||+||
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NI  176 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI  176 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccc
Confidence            99999999999999999986432                  578999999999999999999965   999999999999


Q ss_pred             EEcCCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhC-CcCCCcccchhh
Q 045343          654 LLDDYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISC-RKSFDIEMGEEY  732 (813)
Q Consensus       654 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG-~~p~~~~~~~~~  732 (813)
                      |++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||+|+ .+|+......+.
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~  256 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999987655444434556799999999999999999999999999999999995 454543332211


Q ss_pred             hhhHHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          733 AILTDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       733 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                        +...+..             ..........++.+.+|+.+||+.||.+||||.||+++|++++
T Consensus       257 --~~~~i~~-------------~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         257 --FYKMIKE-------------GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             --HHHHHHH-------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHHHHhc-------------CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence              1111111             1111112234578999999999999999999999999998754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-44  Score=382.91  Aligned_cols=258  Identities=29%  Similarity=0.448  Sum_probs=203.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc-ccccchhhhheeeeeecc-ccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-FQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .+++.++||+|+||+||+|.+..+. ....||||+++.. .....++|.+|+++|+++ +|||||+++++|.+++..++|
T Consensus        11 ~~~~~~~iG~G~fg~Vy~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          11 DIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETT-EEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HcEEEEEEeeCCCcEEEEEEECCCC-eEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            3466789999999999999986432 3346889988643 334556799999999998 799999999999999999999


Q ss_pred             EeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCE
Q 045343          598 YEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNA  661 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~  661 (813)
                      |||+++|+|.++|+..                ..+++..+++++.|||+||.|||+.   +|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCce
Confidence            9999999999999643                5689999999999999999999964   99999999999999999999


Q ss_pred             EEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCc-CCCcccchhhhhhHHHHH
Q 045343          662 RISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRK-SFDIEMGEEYAILTDWAF  740 (813)
Q Consensus       662 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~-p~~~~~~~~~~~l~~~~~  740 (813)
                      ||+|||+++.......   .....||..|+|||.+.+..++.++|||||||++|||++|.. ||......+   +.    
T Consensus       167 kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~---~~----  236 (309)
T d1fvra_         167 KIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LY----  236 (309)
T ss_dssp             EECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HH----
T ss_pred             EEcccccccccccccc---ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH---HH----
Confidence            9999999986553322   233468999999999999999999999999999999999765 565332211   11    


Q ss_pred             HhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCCC
Q 045343          741 DCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEVS  800 (813)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~  800 (813)
                      ..+..+.         ........++++.+|+.+||+.||++||||+||+++|+++++-.
T Consensus       237 ~~i~~~~---------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         237 EKLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             HHGGGTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHhcC---------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            1111110         01112234578999999999999999999999999999887543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-44  Score=382.55  Aligned_cols=262  Identities=28%  Similarity=0.409  Sum_probs=208.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccC----CcceEEEEEEeecccc-ccchhhhheeeeeecc-ccCCcceEEeEeecCC
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQT-HHKNLVRLLGFCDEGQ  592 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~  592 (813)
                      ..+++.++||+|+||.||+|......    ..+..||||+++.... ....++.+|...+.++ +|||||+++++|.++.
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            35778899999999999999875432    2346899999976433 3346788899999888 7999999999999999


Q ss_pred             ceEEEEeecCCCchhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc
Q 045343          593 NRLLVYEFLNNGTLASFLFGN----------------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD  656 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~  656 (813)
                      ..++||||+++|+|.++|...                ..+++..+++++.||+.||+|||+.   +|+||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeec
Confidence            999999999999999999644                3579999999999999999999964   999999999999999


Q ss_pred             CCCCEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHh-CCcCCCcccchhhhhh
Q 045343          657 DYYNARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAIL  735 (813)
Q Consensus       657 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~ellt-G~~p~~~~~~~~~~~l  735 (813)
                      .++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.......   +
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~---~  246 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L  246 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---H
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH---H
Confidence            999999999999998776554443455679999999999999999999999999999999998 677876443221   1


Q ss_pred             HHHHHHhhccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcCC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVEV  799 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~  799 (813)
                          ...+..+..         .......++.+.+|+.+||+.||++|||+.||++.|++++.+
T Consensus       247 ----~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         247 ----FKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             ----HHHHHTTCC---------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHcCCC---------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence                111111111         111122356789999999999999999999999999987653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=379.12  Aligned_cols=248  Identities=23%  Similarity=0.263  Sum_probs=207.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc---ccccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV---FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|++.+.||+|+||.||+|...   .+++.||||++++.   .....+++.+|+.+|++++|||||++++++.+++..++
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~---~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREK---ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence            3678899999999999999874   46789999999753   22334668899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      ||||+++|+|.+++.....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+|+......
T Consensus        83 v~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             ceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence            99999999999999998899999999999999999999995   499999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                      ..  ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .    .......        
T Consensus       160 ~~--~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~---~----~i~~~~~--------  222 (337)
T d1o6la_         160 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF---E----LILMEEI--------  222 (337)
T ss_dssp             CC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H----HHHHCCC--------
T ss_pred             cc--cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHH---H----HHhcCCC--------
Confidence            22  34567999999999999999999999999999999999999999865432211   1    1111111        


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      ..  +...+.++.+|+.+||+.||.+||+     ++|++++
T Consensus       223 ~~--p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         223 RF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CC--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CC--CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            10  1123567889999999999999995     8888874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-44  Score=380.62  Aligned_cols=267  Identities=21%  Similarity=0.276  Sum_probs=200.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCC----ceEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----NRLL  596 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~l  596 (813)
                      +-+.++||+|+||+||+|.+     ++..||||+++... .....+..|+..+.+++|||||+++++|.+.+    ..++
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~-----~g~~vAvK~~~~~~-~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW-----RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE-----TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEE-----CCEEEEEEEECccc-hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            45678999999999999986     57799999986432 11222445667777889999999999997654    5789


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHED-----CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ||||+++|+|.++|+.. .++|..+++++.|+|.||+|||+.     ..++|+||||||+||||+.++.+||+|||+++.
T Consensus        79 v~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~  157 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence            99999999999999764 689999999999999999999953     146999999999999999999999999999998


Q ss_pred             cccCccc--ceeecccccccccCcccccCCC------CCCccchhhHHHHHHHHHhCCcCCCcccchhhhh--------h
Q 045343          672 LTLNQSK--AIRTAIRGTKGYVAPEWFRNST------ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI--------L  735 (813)
Q Consensus       672 ~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~------~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~--------l  735 (813)
                      .......  .......||+.|+|||++....      ++.++|||||||+||||+||..|+..........        .
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~  237 (303)
T d1vjya_         158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence            7544321  1133467999999999987643      5678999999999999999998875432211000        0


Q ss_pred             HHHHHHhhccCccccccccccc-ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          736 TDWAFDCYRNEKLDDLVEGDME-ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       736 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      ..........+.    ..+.+. .....+....+.+++.+||+.||.+||||.||+++|+++.+
T Consensus       238 ~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         238 VEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            011111111111    111111 11233566789999999999999999999999999987653

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-43  Score=376.03  Aligned_cols=244  Identities=24%  Similarity=0.314  Sum_probs=205.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++...   ....+.+.+|+.++++++|||||++++++.+++..++|
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~---~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSR---HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             eEEEEEEecCcCcEEEEEEEC---CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            678899999999999999874   467899999997532   23346788999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCcc
Q 045343          598 YEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~  677 (813)
                      |||+++|+|..++.....+++..++.++.||+.||+|||+   .+|+||||||+||||+.++.+||+|||+|+.....  
T Consensus        83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eeecCCccccccccccccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence            9999999999999999899999999999999999999994   59999999999999999999999999999876533  


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..   .   .... ..        ..
T Consensus       158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~---~i~~-~~--------~~  219 (316)
T d1fota_         158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY---E---KILN-AE--------LR  219 (316)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---H---HHHH-CC--------CC
T ss_pred             ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH---H---HHHc-CC--------CC
Confidence               23467999999999999999999999999999999999999999765432211   0   1111 10        00


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                        .+...++.+.+++.+||+.||.+|+     |++|++++
T Consensus       220 --~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         220 --FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence              0112346788999999999999996     89999875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-43  Score=372.94  Aligned_cols=258  Identities=23%  Similarity=0.298  Sum_probs=199.4

Q ss_pred             ccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc-----cchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          524 KEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD-----GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       524 ~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      .+.||+|+||+||+|...   .+++.||||+++.....     ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus         3 l~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivm   79 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDK---NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF   79 (299)
T ss_dssp             EEEEEEETTEEEEEEECS---SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred             ceEeccCcCeEEEEEEEC---CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehh
Confidence            478999999999999864   46789999998643221     2356889999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+.++++..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        80 E~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          80 DFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             ECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             hhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence            9999999888887788899999999999999999999964   9999999999999999999999999999876544322


Q ss_pred             ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cccccccc-
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLDDLVE-  753 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~-  753 (813)
                        .....||+.|+|||++... .++.++|||||||++|||++|+.||......+...   .+......   +....... 
T Consensus       157 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~---~i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         157 --YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT---RIFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             --CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCCCCTTTSSSTTSS
T ss_pred             --ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHH---HHHHhcCCCChhhccchhcc
Confidence              3345799999999998654 57999999999999999999999997654432211   11111110   00000000 


Q ss_pred             ------cccccc----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          754 ------GDMEAL----NDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       754 ------~~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                            ......    ......+.+.+|+.+||+.||++|||++|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             chhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence                  000000    001234678999999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-44  Score=379.27  Aligned_cols=261  Identities=27%  Similarity=0.450  Sum_probs=209.5

Q ss_pred             HHhhcccccceeeeeeEEEEEEecc--CCcceEEEEEEeeccc-cccchhhhheeeeeeccccCCcceEEeEeecCCceE
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTT--RTSTTAVAVKKLDRVF-QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~  595 (813)
                      ..+++.++||+|+||+||+|.+...  ...+..||||+++... ......|.+|++++++++|||||+++++|..++..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            4557789999999999999987432  2245789999997532 223346899999999999999999999999999999


Q ss_pred             EEEeecCCCchhhhhhcc----------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEee
Q 045343          596 LVYEFLNNGTLASFLFGN----------LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISD  665 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~D  665 (813)
                      +||||+++|+|.+++...          ..+++..+.+++.|+|+||.|||+.   +|+||||||+|||++.++++||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEee
Confidence            999999999999998632          2468999999999999999999964   999999999999999999999999


Q ss_pred             ccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCC-cCCCcccchhhhhhHHHHHHhhc
Q 045343          666 FGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCR-KSFDIEMGEEYAILTDWAFDCYR  744 (813)
Q Consensus       666 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~  744 (813)
                      ||+++.+.............||+.|+|||.+.+..++.++||||||+++|||+||. .|+......+..       ....
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~-------~~i~  249 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL-------RFVM  249 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH-------HHHH
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHH-------HHHH
Confidence            99999876544433334456899999999999999999999999999999999985 556543222111       1111


Q ss_pred             cCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCcC
Q 045343          745 NEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVVE  798 (813)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~  798 (813)
                      .+....         ....+++.+.+++.+||+.||++||||.+|+++|++.++
T Consensus       250 ~~~~~~---------~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         250 EGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             TTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             hCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            111111         112345789999999999999999999999999988654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=8.8e-43  Score=364.72  Aligned_cols=251  Identities=22%  Similarity=0.292  Sum_probs=205.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---------cchhhhheeeeeeccc-cCCcceEEeEee
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---------GEKEFKNEVVVIGQTH-HKNLVRLLGFCD  589 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~l~g~~~  589 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||+++.....         ..+.+.+|+.++++++ |||||++++++.
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~---~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHK---PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             cCEEceEEecCcCeEEEEEEEC---CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            3677899999999999999864   46789999999754321         1235788999999997 999999999999


Q ss_pred             cCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCc
Q 045343          590 EGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLA  669 (813)
Q Consensus       590 ~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla  669 (813)
                      +++..+|||||+++|+|.++|.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchhe
Confidence            9999999999999999999999888999999999999999999999964   9999999999999999999999999999


Q ss_pred             cccccCcccceeecccccccccCcccccC------CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhh
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRN------STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY  743 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~  743 (813)
                      +.+.....   .....||+.|+|||++.+      ..++.++||||+||++|||++|+.||.........       ...
T Consensus       158 ~~~~~~~~---~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~-------~~i  227 (277)
T d1phka_         158 CQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML-------RMI  227 (277)
T ss_dssp             EECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHH
T ss_pred             eEccCCCc---eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHH-------HHH
Confidence            98765332   344679999999999853      34688999999999999999999999865432211       111


Q ss_pred             ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          744 RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+...      .........++++.+++.+||+.||.+|||++||+++
T Consensus       228 ~~~~~~------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         228 MSGNYQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHTCCC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HhCCCC------CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111110      0111122345789999999999999999999999875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.2e-43  Score=366.85  Aligned_cols=259  Identities=22%  Similarity=0.301  Sum_probs=202.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc---cchhhhheeeeeeccccCCcceEEeEeecCCc---
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD---GEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQN---  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~---  593 (813)
                      .|++.+.||+|+||+||+|...   .+++.||||+++.....   ..+.+.+|+.++++++|||||++++++...+.   
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDL---RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             eeEEeEEEeeCCCeEEEEEEEC---CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            3678899999999999999874   46789999999754322   23468999999999999999999999876543   


Q ss_pred             -eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          594 -RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       594 -~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                       .+|||||+++++|.+++.....+++..++.++.||++||+|||+.   +|+||||||+|||++.++..+|+|||.+...
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             eEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhh
Confidence             789999999999999998888999999999999999999999964   9999999999999999999999999998766


Q ss_pred             ccCccc-ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccc
Q 045343          673 TLNQSK-AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDL  751 (813)
Q Consensus       673 ~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  751 (813)
                      ...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||......+.      ...........  
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~~~~~~~~~--  233 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV------AYQHVREDPIP--  233 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------HHHHHHCCCCC--
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH------HHHHHhcCCCC--
Confidence            433221 123446799999999999999999999999999999999999999975543221      11111111110  


Q ss_pred             ccccccccccHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHhcCc
Q 045343          752 VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-TMKKVLQMLEGVV  797 (813)
Q Consensus       752 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~  797 (813)
                           ........++.+.+++.+||+.||.+|| |++++++.|.++.
T Consensus       234 -----~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 -----PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             -----GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             -----CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                 0011113457889999999999999999 8999999887653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-42  Score=374.92  Aligned_cols=245  Identities=24%  Similarity=0.216  Sum_probs=205.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeeeccccCCcceEEeEeecCCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~l  596 (813)
                      .|++.++||+|+||.||+|...   .+++.||||+++...   ....+.+.+|+.+|++++|||||++++++.+....++
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~---~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEEC---CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccc
Confidence            4778899999999999999874   467899999986432   2334568899999999999999999999999999999


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |+||+.+|+|..++.....+++..++.++.||+.||.|||+.   +|+||||||+||||+.++.+||+|||+|+.+... 
T Consensus       119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-  194 (350)
T d1rdqe_         119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc-
Confidence            999999999999998888999999999999999999999954   9999999999999999999999999999886533 


Q ss_pred             ccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccccccc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDM  756 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  756 (813)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........   ..+    ....        .
T Consensus       195 ----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i----~~~~--------~  255 (350)
T d1rdqe_         195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY---EKI----VSGK--------V  255 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH----HHCC--------C
T ss_pred             ----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHH---HHH----hcCC--------C
Confidence                23457999999999999999999999999999999999999999754332111   111    1111        0


Q ss_pred             cccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          757 EALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       757 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                      .  .....+..+.+++.+||+.||.+|+     |++|++++
T Consensus       256 ~--~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         256 R--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             C--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             C--CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence            0  0112356788999999999999994     89999863

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3e-42  Score=374.93  Aligned_cols=248  Identities=24%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhh---eeeeeeccccCCcceEEeEeecCCce
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKN---EVVVIGQTHHKNLVRLLGFCDEGQNR  594 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~  594 (813)
                      |++.++||+|+||.||+|...   .+++.||||++....   ......+.+   |+.+++.++|||||++++++.+.+..
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~---~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             CeeeeEEecCCCeEEEEEEEC---CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            667899999999999999874   467899999986421   122223444   46777788899999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++||||+++|+|.++|.....+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            99999999999999999888899999999999999999999964   999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVE  753 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  753 (813)
                      ..    .....||+.|+|||++.. ..++.++|||||||+||||++|+.||..........+.    ....        .
T Consensus       160 ~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~--------~  223 (364)
T d1omwa3         160 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTL--------T  223 (364)
T ss_dssp             SC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH----HHSS--------S
T ss_pred             Cc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH----Hhcc--------c
Confidence            42    334579999999999975 56899999999999999999999999765433221111    1000        0


Q ss_pred             ccccccccHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHH
Q 045343          754 GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPT-----MKKVLQM  792 (813)
Q Consensus       754 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~  792 (813)
                      ....  .....++.+.+|+.+||+.||.+|||     ++|++++
T Consensus       224 ~~~~--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         224 MAVE--LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             CCCC--CCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             CCCC--CCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            0000  01123567899999999999999999     6888764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=371.55  Aligned_cols=247  Identities=27%  Similarity=0.335  Sum_probs=202.8

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc---cccchhhhheeeeee-ccccCCcceEEeEeecCCceE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF---QDGEKEFKNEVVVIG-QTHHKNLVRLLGFCDEGQNRL  595 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~~~~~~  595 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++...   ....+.+..|..++. .++|||||++++++.+++..+
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~---~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFK---KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEEC---CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCcee
Confidence            3678899999999999999874   467899999997532   233345667777665 689999999999999999999


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      +||||+++|+|.+++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccc
Confidence            9999999999999999888899999999999999999999964   9999999999999999999999999999876543


Q ss_pred             cccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccc
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGD  755 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  755 (813)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........       .......      +.
T Consensus       157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~-------~~i~~~~------~~  221 (320)
T d1xjda_         157 DAK--TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-------HSIRMDN------PF  221 (320)
T ss_dssp             TCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHCC------CC
T ss_pred             ccc--ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHH-------HHHHcCC------CC
Confidence            322  34567999999999999999999999999999999999999999865432211       1111110      00


Q ss_pred             ccccccHHHHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 045343          756 MEALNDIKCVEKLVMVSIWCIQEDPSLRPTMK-KVLQ  791 (813)
Q Consensus       756 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~  791 (813)
                      .    +...+..+.+|+.+||+.||.+||++. |+++
T Consensus       222 ~----p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 Y----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             C----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             C----CccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            0    112356788999999999999999995 7764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=370.33  Aligned_cols=248  Identities=23%  Similarity=0.268  Sum_probs=196.6

Q ss_pred             Hhhcc-cccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecc-ccCCcceEEeEeec----CCc
Q 045343          520 TDNFK-EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQT-HHKNLVRLLGFCDE----GQN  593 (813)
Q Consensus       520 ~~~~~-~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~----~~~  593 (813)
                      .|.+. +.||+|+||+||+|...   .+++.||||+++.     .+.+.+|+.++.++ +|||||++++++.+    ...
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~---~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNK---RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEET---TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEEC---CCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence            35555 45999999999999874   3678999999864     34677899887655 89999999999865    456


Q ss_pred             eEEEEeecCCCchhhhhhcc--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC---CCCEEEeeccC
Q 045343          594 RLLVYEFLNNGTLASFLFGN--LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD---YYNARISDFGL  668 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~---~~~~kl~DfGl  668 (813)
                      .++||||+++|+|.++|...  ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.   .+.+||+|||+
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccce
Confidence            89999999999999999764  4689999999999999999999954   9999999999999985   56799999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      |+.......   .....||+.|+|||++.+..++.++|||||||+||||+||+.||..........   ...        
T Consensus       161 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~---~~~--------  226 (335)
T d2ozaa1         161 AKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---GMK--------  226 (335)
T ss_dssp             CEECCCCCC---CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------------
T ss_pred             eeeccCCCc---cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH---HHH--------
Confidence            987765432   344679999999999999999999999999999999999999997544322110   000        


Q ss_pred             cccccccc--cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDLVEGDM--EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~~~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..+.....  ........++++.+|+.+||+.||.+|||+.|++++
T Consensus       227 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         227 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             -CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            01111111  111112446789999999999999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=369.10  Aligned_cols=249  Identities=20%  Similarity=0.286  Sum_probs=203.0

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecCCceEEEEee
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVYEF  600 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~e~  600 (813)
                      |.+.++||+|+||+||+|...   .+++.||||.++... .....+.+|+++|++++|||||++++++.+++..+|||||
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~---~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVET---SSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eEEEEEEecCCCeEEEEEEEC---CCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            678899999999999999874   367889999997542 2344688999999999999999999999999999999999


Q ss_pred             cCCCchhhhhhccC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC--CCCEEEeeccCccccccCcc
Q 045343          601 LNNGTLASFLFGNL-KPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD--YYNARISDFGLAKLLTLNQS  677 (813)
Q Consensus       601 ~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~--~~~~kl~DfGla~~~~~~~~  677 (813)
                      +++|+|.+++.... .+++..++.++.||+.||.|||+   .+|+||||||+|||++.  ...+||+|||+++.......
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            99999999998764 78999999999999999999995   49999999999999984  45899999999987654332


Q ss_pred             cceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccccccccccc
Q 045343          678 KAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLVEGDME  757 (813)
Q Consensus       678 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  757 (813)
                         .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||......+..   .   .... ....  .+.   
T Consensus       160 ---~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~---~---~i~~-~~~~--~~~---  224 (321)
T d1tkia_         160 ---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII---E---NIMN-AEYT--FDE---  224 (321)
T ss_dssp             ---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---H---HHHH-TCCC--CCH---
T ss_pred             ---ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHH---H---HHHh-CCCC--CCh---
Confidence               33456899999999999999999999999999999999999999765432211   0   1100 0000  000   


Q ss_pred             ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          758 ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       758 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ......++++.+|+.+||+.||.+|||++|++++
T Consensus       225 -~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         225 -EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             -HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -hhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0001235678899999999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-41  Score=359.65  Aligned_cols=269  Identities=22%  Similarity=0.284  Sum_probs=200.4

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLV  597 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV  597 (813)
                      .|.+.++||+|+||+||+|...   .+++.||||+++...  ....+++.+|++++++++|||||++++++.++.+.++|
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNK---LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCEeccEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence            3566789999999999999874   357789999996532  22356789999999999999999999999999999999


Q ss_pred             EeecCCCchhhhhhc-cCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCc
Q 045343          598 YEFLNNGTLASFLFG-NLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQ  676 (813)
Q Consensus       598 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~  676 (813)
                      |||+.++.+...... ...+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+|+......
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCc
Confidence            999976655444333 45689999999999999999999964   99999999999999999999999999998765433


Q ss_pred             ccceeecccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc---cc
Q 045343          677 SKAIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD---LV  752 (813)
Q Consensus       677 ~~~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~  752 (813)
                      ..  .....||+.|+|||.+.... .+.++|||||||++|||++|+.||......+.............+.....   ..
T Consensus       157 ~~--~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         157 RT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             BC--TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cc--ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc
Confidence            22  33457999999999877665 57899999999999999999999976543221110000000000000000   00


Q ss_pred             cc-----cc-c---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcC
Q 045343          753 EG-----DM-E---ALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGV  796 (813)
Q Consensus       753 ~~-----~~-~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~  796 (813)
                      +.     .. .   ........+.+.+|+.+||+.||.+|||++|++++  ++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            00     00 0   00011234678899999999999999999999987  5443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-42  Score=358.96  Aligned_cols=240  Identities=24%  Similarity=0.428  Sum_probs=197.2

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------cchhhhheeeeeeccc--cCCcceEEeEeecC
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------GEKEFKNEVVVIGQTH--HKNLVRLLGFCDEG  591 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~  591 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++.....      ...++.+|+.++++++  |||||++++++.+.
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRV---SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             eEEEeEEEeeCCCeEEEEEEEC---CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            4778899999999999999874   36789999998753221      2345778999999986  89999999999999


Q ss_pred             CceEEEEeecCC-CchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-CCCEEEeeccCc
Q 045343          592 QNRLLVYEFLNN-GTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-YYNARISDFGLA  669 (813)
Q Consensus       592 ~~~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-~~~~kl~DfGla  669 (813)
                      +..++||||+.+ +++.+++.....+++..++.++.||++||+|||+   .+|+||||||+|||++. ++.+||+|||+|
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccc
Confidence            999999999976 6888888888889999999999999999999995   49999999999999985 579999999999


Q ss_pred             cccccCcccceeecccccccccCcccccCCCC-CCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcc
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTI-TAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKL  748 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  748 (813)
                      +......    .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....     +    .   .. ..
T Consensus       159 ~~~~~~~----~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----i----~---~~-~~  221 (273)
T d1xwsa_         159 ALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----I----I---RG-QV  221 (273)
T ss_dssp             EECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H----H---HC-CC
T ss_pred             eeccccc----ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-----H----h---hc-cc
Confidence            8754332    345679999999999987765 5679999999999999999999974311     0    0   00 00


Q ss_pred             cccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          749 DDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       749 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                        ...        ...++++.+++.+||+.||.+|||++|++++
T Consensus       222 --~~~--------~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         222 --FFR--------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             --CCS--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --CCC--------CCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence              011        1234678899999999999999999999875

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-41  Score=356.56  Aligned_cols=260  Identities=22%  Similarity=0.275  Sum_probs=200.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.++||+|+||+||+|...    +++.||||+++...  ....+++.+|+.+|++++|||||++++++.+++..++++
T Consensus         4 Y~~~~~iG~G~fg~Vy~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           4 YHGLEKIGEGTYGVVYKAQNN----YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             EEEEEEEEEETTEEEEEEEET----TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             ceeccEEecCCCcEEEEEEeC----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence            567789999999999999873    56889999996532  233567899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      ||+.++.+..+......+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||++.........
T Consensus        80 e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             EeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence            9999988888888888999999999999999999999964   9999999999999999999999999999876543222


Q ss_pred             ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Cccc-----
Q 045343          679 AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKLD-----  749 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~-----  749 (813)
                        .....+++.|+|||.+.+. .++.++|||||||++|||++|+.||......+...  . .......   ....     
T Consensus       157 --~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~--~-i~~~~~~~~~~~~~~~~~~  231 (286)
T d1ob3a_         157 --YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--R-IFRILGTPNSKNWPNVTEL  231 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--H-HHHHHCCCCTTTSTTGGGS
T ss_pred             --cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHH--H-HHHhhCCCChhhccchhhh
Confidence              2345689999999998754 56899999999999999999999997554322111  1 1111000   0000     


Q ss_pred             -cc------ccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          750 -DL------VEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       750 -~~------~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                       ..      ..+...........+.+.+|+.+||+.||++|||++|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             00      00000001112235678899999999999999999999864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=355.21  Aligned_cols=262  Identities=24%  Similarity=0.310  Sum_probs=198.3

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeecc---ccCCcceEEeEeec----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQT---HHKNLVRLLGFCDE----  590 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~----  590 (813)
                      .|++.++||+|+||+||+|....  ..++.||||+++....  .....+.+|+.+++.+   +||||+++++++..    
T Consensus         8 ~Y~i~~~LG~G~fg~V~~a~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           8 QYECVAEIGEGAYGKVFKARDLK--NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             CEEEEEEEecccCeEEEEEEEEC--CCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46778999999999999998742  2467899999865322  2334567888887776   79999999999843    


Q ss_pred             -CCceEEEEeecCCCchhhhhh-ccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          591 -GQNRLLVYEFLNNGTLASFLF-GNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       591 -~~~~~lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                       ....++++||+.++.+..... ....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhh
Confidence             346799999999988765544 346789999999999999999999964   999999999999999999999999999


Q ss_pred             ccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---
Q 045343          669 AKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---  745 (813)
Q Consensus       669 a~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---  745 (813)
                      ++.......   .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+....   .......   
T Consensus       163 ~~~~~~~~~---~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~---i~~~~~~~~~  236 (305)
T d1blxa_         163 ARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK---ILDVIGLPGE  236 (305)
T ss_dssp             CCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH---HHHHHCCCCG
T ss_pred             hhhhccccc---CCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHH---HHHhhCCCch
Confidence            987654322   3456799999999999999999999999999999999999999986544322111   1111100   


Q ss_pred             Cccc------c-ccc---ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLD------D-LVE---GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~------~-~~~---~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ....      . ...   ............+.+.+|+.+||+.||++|||++|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000      0 000   000000111235678899999999999999999999875

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-40  Score=353.00  Aligned_cols=256  Identities=21%  Similarity=0.245  Sum_probs=207.0

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc----cccchhhhheeeeeecccc-CCcceEEeEeecCCce
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF----QDGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEGQNR  594 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~  594 (813)
                      .|++.++||+|+||+||+|....++.+++.||||.++...    ....+.+.+|++++++++| |||+++++++.+....
T Consensus        25 ~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~  104 (322)
T d1vzoa_          25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  104 (322)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCce
Confidence            3788899999999999999987666678999999986432    2234578899999999976 8999999999999999


Q ss_pred             EEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccccc
Q 045343          595 LLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTL  674 (813)
Q Consensus       595 ~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~  674 (813)
                      ++|+||+.+|+|.+++.....+++.....++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus       105 ~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         105 HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             eeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence            9999999999999999988888999999999999999999995   4999999999999999999999999999987654


Q ss_pred             CcccceeecccccccccCcccccCC--CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccccc
Q 045343          675 NQSKAIRTAIRGTKGYVAPEWFRNS--TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDDLV  752 (813)
Q Consensus       675 ~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  752 (813)
                      ..... .....|++.|+|||.+.+.  .++.++|||||||+||||++|+.||...........   .......       
T Consensus       182 ~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~---i~~~~~~-------  250 (322)
T d1vzoa_         182 DETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE---ISRRILK-------  250 (322)
T ss_dssp             GGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH---HHHHHHH-------
T ss_pred             ccccc-ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhccc-------
Confidence            43332 3446799999999999764  468899999999999999999999976543321111   0000000       


Q ss_pred             cccccccccHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 045343          753 EGDMEALNDIKCVEKLVMVSIWCIQEDPSLRP-----TMKKVLQM  792 (813)
Q Consensus       753 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~  792 (813)
                       ...  ......++++.+++.+||+.||.+||     |++|++++
T Consensus       251 -~~~--~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         251 -SEP--PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             -CCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             -CCC--CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence             000  01123467889999999999999999     58999874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-40  Score=351.21  Aligned_cols=268  Identities=19%  Similarity=0.222  Sum_probs=200.0

Q ss_pred             HHhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecc--ccccchhhhheeeeeeccccCCcceEEeEeec------
Q 045343          519 ATDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV--FQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE------  590 (813)
Q Consensus       519 ~~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------  590 (813)
                      ..|.+.++||+|+||+||+|...   .+++.||||++...  .....+++.+|+++|++++|+||+++++.+..      
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHR---KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET---TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred             CCEEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence            35677899999999999999874   46789999998543  23345668899999999999999999998854      


Q ss_pred             --CCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccC
Q 045343          591 --GQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGL  668 (813)
Q Consensus       591 --~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGl  668 (813)
                        ....++||||+.++.+..+......++...+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecce
Confidence              346899999999988887777778889999999999999999999954   999999999999999999999999999


Q ss_pred             ccccccCccc--ceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc
Q 045343          669 AKLLTLNQSK--AIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN  745 (813)
Q Consensus       669 a~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  745 (813)
                      ++........  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....................
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  243 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            9876543221  112335699999999998765 6899999999999999999999999765443322221111111111


Q ss_pred             Ccccccc--------cccccccc-------cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          746 EKLDDLV--------EGDMEALN-------DIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       746 ~~~~~~~--------~~~~~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .......        ........       .......+.+|+.+||+.||++|||++|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            1111100        00000000       01123467789999999999999999999977

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-39  Score=345.71  Aligned_cols=261  Identities=18%  Similarity=0.177  Sum_probs=196.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceE-EeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRL-LGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l-~g~~~~~~~~~lV~  598 (813)
                      .|++.++||+|+||+||+|...   .+++.||||.+...  ...+++..|++++++++|+|++.. .++..+++..++||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~--~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDI---AAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET---TTTEEEEEEEEESC--TTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEEEC---CCCCEEEEEEEchh--ccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            3778899999999999999874   35789999988653  334578899999999987775555 45557777889999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEc---CCCCEEEeeccCccccccC
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLD---DYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~---~~~~~kl~DfGla~~~~~~  675 (813)
                      ||+.++.+..+......+++..+..++.|+++||+|||+.   +|+||||||+|||++   .+..+||+|||+|+.+...
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          83 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             EEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            9995544444445567899999999999999999999964   999999999999985   4567999999999987543


Q ss_pred             ccc-----ceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCcccc
Q 045343          676 QSK-----AIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLDD  750 (813)
Q Consensus       676 ~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  750 (813)
                      ...     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..........................
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (299)
T d1ckia_         160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV  239 (299)
T ss_dssp             TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHH
T ss_pred             ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhH
Confidence            321     112345799999999999999999999999999999999999999976543221111100000000000000


Q ss_pred             cccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          751 LVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       751 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                               .....++++.+++..||+.+|++||++.++.+.|+.+.
T Consensus       240 ---------~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         240 ---------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             ---------HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             ---------hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence                     01123577899999999999999999999998887654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=353.99  Aligned_cols=264  Identities=23%  Similarity=0.278  Sum_probs=195.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCcceEEeEeecC------Cc
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEG------QN  593 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~  593 (813)
                      +|...++||+|+||+||+|...   .+++.||||+++..    ...+.+|+++|++++|+||+++++++...      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET---TTCCEEEEEEEECC----SSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCeEEEEEEEC---CCCCEEEEEEECcc----chHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence            4666789999999999999874   46789999998653    23456799999999999999999998432      24


Q ss_pred             eEEEEeecCCCchhhhh---hccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCc
Q 045343          594 RLLVYEFLNNGTLASFL---FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLA  669 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l---~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla  669 (813)
                      .+|||||++++.+..+.   .....+++..++.++.||+.||+|||+   .+|+||||||+|||++.++ .+||+|||++
T Consensus        94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a  170 (350)
T d1q5ka_          94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSA  170 (350)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred             EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccch
Confidence            68999999877544433   345678999999999999999999994   5999999999999999765 8999999999


Q ss_pred             cccccCcccceeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHH---------HH
Q 045343          670 KLLTLNQSKAIRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD---------WA  739 (813)
Q Consensus       670 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~---------~~  739 (813)
                      +.......   .....||..|+|||.+.+ ..++.++||||+||++|||++|+.||......+......         ..
T Consensus       171 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~  247 (350)
T d1q5ka_         171 KQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI  247 (350)
T ss_dssp             EECCTTSC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             hhccCCcc---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhh
Confidence            87754432   334579999999998765 468999999999999999999999997654322111000         00


Q ss_pred             HHhh---ccCcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcC
Q 045343          740 FDCY---RNEKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGV  796 (813)
Q Consensus       740 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~  796 (813)
                      ....   ......................+.+.+|+.+||+.||++|||+.|++++  ++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            0000   0001111111111111112345678999999999999999999999975  5544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.4e-39  Score=340.28  Aligned_cols=260  Identities=18%  Similarity=0.220  Sum_probs=204.7

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc-CCcceEEeEeecCCceEEEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH-KNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~lV~  598 (813)
                      .|.+.++||+|+||+||+|...   .+++.||||.++..  ....++.+|+++++.++| +|++.+++++.++...++||
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~---~~~~~vAvK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNL---LNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET---TTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEccc--cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            4678899999999999999874   36789999988653  334568889999999975 89999999999999999999


Q ss_pred             eecCCCchhhhhhcc-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcC-----CCCEEEeeccCcccc
Q 045343          599 EFLNNGTLASFLFGN-LKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDD-----YYNARISDFGLAKLL  672 (813)
Q Consensus       599 e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~DfGla~~~  672 (813)
                      ||+ +++|.+++... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.     ++.+||+|||+|+.+
T Consensus        81 e~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          81 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             Eec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            998 68998888654 478999999999999999999994   59999999999999974     578999999999987


Q ss_pred             ccCcccc-----eeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCc
Q 045343          673 TLNQSKA-----IRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEK  747 (813)
Q Consensus       673 ~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  747 (813)
                      .......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||..............+........
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  236 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC
Confidence            5432211     12345799999999999999999999999999999999999999976543322111111111110001


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhcCc
Q 045343          748 LDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQMLEGVV  797 (813)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~  797 (813)
                      ..++         ....++++.+++..|++.+|++||+++.+.+.|++++
T Consensus       237 ~~~l---------~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         237 LREL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HHHH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             hHHh---------cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            1111         0123467889999999999999999999999887754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-39  Score=350.99  Aligned_cols=266  Identities=25%  Similarity=0.298  Sum_probs=193.9

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeecCC-----
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ-----  592 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-----  592 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++...  ....+.+.+|+.+|++++|||||++++++...+     
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDG---RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             SEEEEEEC------CEEEEEET---TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cEEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            4667789999999999999874   467899999997532  222456889999999999999999999997654     


Q ss_pred             -ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          593 -NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       593 -~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                       +.++||||+ +.+|..++. ...+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ceEEEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceec
Confidence             569999999 556766654 45789999999999999999999954   999999999999999999999999999987


Q ss_pred             cccCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHH--------Hh
Q 045343          672 LTLNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAF--------DC  742 (813)
Q Consensus       672 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~  742 (813)
                      ....     .....||+.|+|||.+.+. .++.++||||+||++|||++|+.||................        ..
T Consensus       171 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d1cm8a_         171 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR  245 (346)
T ss_dssp             CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             cCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence            6543     3445799999999998764 56899999999999999999999997654322111100000        00


Q ss_pred             hcc-------CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcCC
Q 045343          743 YRN-------EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVEV  799 (813)
Q Consensus       743 ~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~  799 (813)
                      ...       ..+.+........ ........+.+|+.+||+.||.+|||++|++++  ++.+.+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         246 LQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             hcchhhhhhhccCCcccccchHH-hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence            000       0000000000000 011234677899999999999999999999987  6665543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-39  Score=340.14  Aligned_cols=262  Identities=21%  Similarity=0.268  Sum_probs=204.1

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeecCCceEEEE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQNRLLVY  598 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~lV~  598 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++....  ...+++.+|+.++++++|+||+++++++.+....++|+
T Consensus         4 y~~i~~LG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           4 YEKLEKIGEGTYGTVFKAKNR---ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEET---TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEeeeEEecCcCeEEEEEEEC---CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence            567799999999999999874   4678899999865332  23467899999999999999999999999999999999


Q ss_pred             eecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccCccc
Q 045343          599 EFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLNQSK  678 (813)
Q Consensus       599 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~  678 (813)
                      |++.+++|..++.....+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||.++........
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC
T ss_pred             eeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCcc
Confidence            9999999999998888899999999999999999999964   9999999999999999999999999999876544322


Q ss_pred             ceeecccccccccCcccccCCC-CCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc---Ccc---ccc
Q 045343          679 AIRTAIRGTKGYVAPEWFRNST-ITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN---EKL---DDL  751 (813)
Q Consensus       679 ~~~~~~~gt~~y~aPE~l~~~~-~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~---~~~  751 (813)
                        .....++..|+|||.+.... ++.++|||||||++|||++|+.||..........  ..+......   ...   ...
T Consensus       158 --~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         158 --YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL--KRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             --CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHH--HHHHHHHCCCCTTTCTTGGGS
T ss_pred             --ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHH--HHHHhhcCCCChhhhhhhhhc
Confidence              23345788899999987665 6899999999999999999999975433322111  111111110   000   000


Q ss_pred             cc---------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          752 VE---------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       752 ~~---------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      .+         ............+.+.+|+.+||+.||.+|||++||+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00         000011112335678899999999999999999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=348.09  Aligned_cols=269  Identities=22%  Similarity=0.283  Sum_probs=196.4

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc-ccchhhhheeeeeeccccCCcceEEeEeecCC----ceE
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ-DGEKEFKNEVVVIGQTHHKNLVRLLGFCDEGQ----NRL  595 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~----~~~  595 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++.... ...+++.+|+.+|++++||||+++++++....    ..+
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDN---VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             EEEEEECC---CCCEEEEEET---TTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             eEEEEEEeeccCeEEEEEEEC---CCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            667799999999999999864   4678999999975332 23457889999999999999999999996543    335


Q ss_pred             EEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccccC
Q 045343          596 LVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLTLN  675 (813)
Q Consensus       596 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~~~  675 (813)
                      ++++|+.+|+|.+++... .+++..++.++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus        87 ~l~~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EEEEeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            566777899999999654 689999999999999999999964   9999999999999999999999999999876544


Q ss_pred             cccc-eeecccccccccCcccccC-CCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhccCccc----
Q 045343          676 QSKA-IRTAIRGTKGYVAPEWFRN-STITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNEKLD----  749 (813)
Q Consensus       676 ~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~----  749 (813)
                      .... ......||+.|+|||.+.. ..++.++||||+||++|||++|+.||......+..................    
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhh
Confidence            3221 1344669999999999855 457889999999999999999999997654322211111000000000000    


Q ss_pred             ----c-c--ccccccc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcC
Q 045343          750 ----D-L--VEGDMEA---LNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGV  796 (813)
Q Consensus       750 ----~-~--~~~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~  796 (813)
                          . .  .......   ........++.+|+.+||+.||.+|||+.|++++  |+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                0 0  0000000   0001223568899999999999999999999986  5543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4.4e-38  Score=338.71  Aligned_cols=258  Identities=20%  Similarity=0.324  Sum_probs=196.5

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeec--CCceEE
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDE--GQNRLL  596 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~--~~~~~l  596 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++..   ..+++.+|+++|++++ ||||+++++++..  ....++
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~---~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINI---TNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEEC---CCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            5778899999999999999874   46789999998643   3467889999999995 9999999999864  456899


Q ss_pred             EEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC-CEEEeeccCccccccC
Q 045343          597 VYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY-NARISDFGLAKLLTLN  675 (813)
Q Consensus       597 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~-~~kl~DfGla~~~~~~  675 (813)
                      ||||+.+++|..+.   ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus       110 v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         110 VFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             EEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999999998764   4589999999999999999999954   999999999999998654 6999999999877654


Q ss_pred             cccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhh--hHHH-----HHHhh---c
Q 045343          676 QSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI--LTDW-----AFDCY---R  744 (813)
Q Consensus       676 ~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~--l~~~-----~~~~~---~  744 (813)
                      ..   .....+|+.|+|||.+.+. .++.++||||+||+++||++|+.||..........  +...     .....   .
T Consensus       184 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  260 (328)
T d3bqca1         184 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN  260 (328)
T ss_dssp             CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred             Cc---ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcc
Confidence            32   3445689999999998765 47999999999999999999999997654322111  0000     00000   0


Q ss_pred             cC---ccccccc--------ccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          745 NE---KLDDLVE--------GDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       745 ~~---~~~~~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..   .......        ............+++.+|+.+||+.||.+|||++|++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00   0000000        000111112345678899999999999999999999873

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-38  Score=340.46  Aligned_cols=260  Identities=24%  Similarity=0.278  Sum_probs=187.3

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccc--cccchhhhheeeeeeccccCCcceEEeEeec------CC
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVF--QDGEKEFKNEVVVIGQTHHKNLVRLLGFCDE------GQ  592 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~  592 (813)
                      |++.++||+|+||+||+|...   .+++.||||++....  ....+++.+|+.++++++|||||++++++..      ..
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~---~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDA---VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEET---TTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             eEEEEEeecCcCeEEEEEEEC---CCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            567789999999999999874   367899999997542  2233468899999999999999999999853      35


Q ss_pred             ceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCcccc
Q 045343          593 NRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLL  672 (813)
Q Consensus       593 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~  672 (813)
                      ..++||||+.++.+..+ .  ..+++..++.++.||+.||.|||+.   +|+||||||+|||++.++.+|++|||+++..
T Consensus        96 ~~~iv~Ey~~~~l~~~~-~--~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          96 DVYLVMELMDANLCQVI-Q--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEEEEECCSEEHHHHH-T--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eeEEEEeccchHHHHhh-h--cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcc
Confidence            78999999977655543 2  4578999999999999999999964   9999999999999999999999999998876


Q ss_pred             ccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhH----------------
Q 045343          673 TLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT----------------  736 (813)
Q Consensus       673 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~----------------  736 (813)
                      .....   .....+|+.|+|||++.+..++.++||||+||+++||++|+.||............                
T Consensus       170 ~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (355)
T d2b1pa1         170 GTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred             ccccc---cccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence            54332   34456899999999999999999999999999999999999999754322111000                


Q ss_pred             HHHHHhhccC------cccccccccc---cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 045343          737 DWAFDCYRNE------KLDDLVEGDM---EALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM  792 (813)
Q Consensus       737 ~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~  792 (813)
                      ..........      ..........   ...........+.+|+.+||+.||++|||++||+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000000000      0000000000   011123456788999999999999999999999976

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-38  Score=340.85  Aligned_cols=275  Identities=25%  Similarity=0.284  Sum_probs=199.2

Q ss_pred             hhcccccceeeeeeEEEEEEeccCCcceEEEEEEeecccc--ccchhhhheeeeeeccccCCcceEEeEeec-----CCc
Q 045343          521 DNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQ--DGEKEFKNEVVVIGQTHHKNLVRLLGFCDE-----GQN  593 (813)
Q Consensus       521 ~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~  593 (813)
                      |++.++||+|+||+||+|...   .+++.||||+++....  ...+++.+|+.+|++++|+|||++++++..     ...
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~~---~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFDT---KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEET---TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             eEEEEEEecCCCeEEEEEEEC---CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            677899999999999999874   4678999999975422  233568899999999999999999999853     334


Q ss_pred             eEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEEeeccCccccc
Q 045343          594 RLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARISDFGLAKLLT  673 (813)
Q Consensus       594 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~~~  673 (813)
                      .+++++|+.+|+|.+++.. ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+|++|||++....
T Consensus        97 ~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             eEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence            5777888899999999865 4689999999999999999999954   99999999999999999999999999997654


Q ss_pred             cCcccceeecccccccccCcccccCC-CCCCccchhhHHHHHHHHHhCCcCCCcccchhhhhhHHHHHHhhcc-------
Q 045343          674 LNQSKAIRTAIRGTKGYVAPEWFRNS-TITAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-------  745 (813)
Q Consensus       674 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-------  745 (813)
                      ..     .....|++.|+|||.+.+. .++.++|||||||++|||++|+.||.....................       
T Consensus       173 ~~-----~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (348)
T d2gfsa1         173 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  247 (348)
T ss_dssp             GG-----GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCC
T ss_pred             cc-----cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhcc
Confidence            32     2345689999999987665 4688999999999999999999999765432211111000000000       


Q ss_pred             --------CcccccccccccccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--HhcCcCCCCCCCCCCC
Q 045343          746 --------EKLDDLVEGDMEALNDIKCVEKLVMVSIWCIQEDPSLRPTMKKVLQM--LEGVVEVSLPPNPYPF  808 (813)
Q Consensus       746 --------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~~~~~p~~p~~~  808 (813)
                              ............. ........+.+|+.+||+.||.+|||++|++++  +.+..+.+..|.+.++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~~~~~~  319 (348)
T d2gfsa1         248 SESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY  319 (348)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHH-HSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCCCCCCC
T ss_pred             chhhhhhhhhcccCCCcchhh-hcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCCCCCCC
Confidence                    0000000000000 001234678899999999999999999999984  5555443333333333

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-33  Score=304.03  Aligned_cols=274  Identities=20%  Similarity=0.257  Sum_probs=192.1

Q ss_pred             HhhcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-----------cCCcceEEeEe
Q 045343          520 TDNFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-----------HKNLVRLLGFC  588 (813)
Q Consensus       520 ~~~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~  588 (813)
                      .|++.++||+|+||+||+|...   .+++.||||+++... ...+.+.+|+.++++++           |+||+++++++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~---~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDM---VNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET---TTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEEC---CCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            4788999999999999999874   467899999997532 22345677888777764           57899999987


Q ss_pred             ecC--CceEEEEeecCCCchhhh-h--hccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCC----
Q 045343          589 DEG--QNRLLVYEFLNNGTLASF-L--FGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYY----  659 (813)
Q Consensus       589 ~~~--~~~~lV~e~~~~gsL~~~-l--~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~----  659 (813)
                      ...  ...+++++++..+..... .  .....+++..+..++.||+.||+|||+  ..+|+||||||+||||+.++    
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTT
T ss_pred             eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccc
Confidence            543  456667776655443222 2  234577899999999999999999996  25899999999999998654    


Q ss_pred             --CEEEeeccCccccccCcccceeecccccccccCcccccCCCCCCccchhhHHHHHHHHHhCCcCCCcccchhh----h
Q 045343          660 --NARISDFGLAKLLTLNQSKAIRTAIRGTKGYVAPEWFRNSTITAKVDVYSFGVLLLEIISCRKSFDIEMGEEY----A  733 (813)
Q Consensus       660 --~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvvl~elltG~~p~~~~~~~~~----~  733 (813)
                        .++++|||.+......     .....||+.|+|||.+....++.++||||+||+++||++|+.||........    .
T Consensus       168 ~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~  242 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  242 (362)
T ss_dssp             EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             cceeeEeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhH
Confidence              3999999999865432     2345699999999999999999999999999999999999999975433111    0


Q ss_pred             hhHHHHHHhhc------------------cC-ccccccccc---------ccccccHHHHHHHHHHHHHhcccCCCCCCC
Q 045343          734 ILTDWAFDCYR------------------NE-KLDDLVEGD---------MEALNDIKCVEKLVMVSIWCIQEDPSLRPT  785 (813)
Q Consensus       734 ~l~~~~~~~~~------------------~~-~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt  785 (813)
                      .+.... ..+.                  .. ....+....         ............+.+|+.+||+.||.+|||
T Consensus       243 ~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpt  321 (362)
T d1q8ya_         243 HIAQII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  321 (362)
T ss_dssp             HHHHHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHH-HHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcC
Confidence            111100 0000                  00 000000000         011123456788999999999999999999


Q ss_pred             HHHHHHH--HhcC---cCCCCCCCC
Q 045343          786 MKKVLQM--LEGV---VEVSLPPNP  805 (813)
Q Consensus       786 ~~evl~~--L~~~---~~~~~p~~p  805 (813)
                      ++|++++  +++.   .++..|+.|
T Consensus       322 a~e~L~Hp~f~~~~~~~~~~~p~~~  346 (362)
T d1q8ya_         322 AGGLVNHPWLKDTLGMEEIRVPDRE  346 (362)
T ss_dssp             HHHHHTCGGGTTCTTCTTCCCTTSC
T ss_pred             HHHHhcCcccCCCCCcccCCCCCcc
Confidence            9999986  5533   233444444

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.82  E-value=1.7e-20  Score=165.77  Aligned_cols=111  Identities=18%  Similarity=0.366  Sum_probs=92.3

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      +|+|.+||.|.+|+   +|+|  |.|.|+|+.+|         .|.|++    ..++||.||++   .+ ..++.|.|+.
T Consensus         1 tDtL~~gq~L~~g~---~l~~--g~~~l~~q~DG---------NLvly~----~~~~vW~s~~~---~~-~~~~~l~l~~   58 (112)
T d1xd5a_           1 SDRLNSGHQLDTGG---SLAE--GGYLFIIQNDC---------NLVLYD----NNRAVWASGTN---GK-ASGCVLKMQN   58 (112)
T ss_dssp             CCEEETTEEECTTC---EEEE--TTEEEEECTTS---------CEEEEE----TTEEEEECCCT---TS-CSSEEEEECT
T ss_pred             CCEecCCCEecCCC---EEEE--CCEEEEEcCCC---------CEEEEc----CCcEEEEccCc---cC-CCCcEEEEec
Confidence            48999999999999   8875  99999998765         255654    35899999987   22 3457899999


Q ss_pred             CccEEEeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccccccCcC
Q 045343          107 DHGLVLNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSD  160 (813)
Q Consensus       107 ~g~l~l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTD  160 (813)
                      ||+|+|++. +.++|+++++.. +..+|+|+|+|||||++.+++++|||+.+|+|
T Consensus        59 dGnLvl~~~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          59 DGNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             TSCEEEEET-TEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             cccEEEEec-CCeEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence            999999996 567888776644 44689999999999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.80  E-value=2.1e-20  Score=183.06  Aligned_cols=162  Identities=13%  Similarity=0.107  Sum_probs=117.3

Q ss_pred             hcccccceeeeeeEEEEEEeccCCcceEEEEEEeeccccc------------------cchhhhheeeeeeccccCCcce
Q 045343          522 NFKEEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRVFQD------------------GEKEFKNEVVVIGQTHHKNLVR  583 (813)
Q Consensus       522 ~~~~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~------------------~~~~~~~E~~~l~~l~h~niv~  583 (813)
                      .+.++||+|+||+||+|...    +++.||||.++.....                  .......|...+.++.|.+++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~----~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~   78 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE----KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK   78 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET----TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             hhCCEeeeCcceEEEEEECC----CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence            45789999999999999863    5788999987531110                  0112345777888899999999


Q ss_pred             EEeEeecCCceEEEEeecCCCchhhhhhccCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeCCCCCCcEEEcCCCCEEE
Q 045343          584 LLGFCDEGQNRLLVYEFLNNGTLASFLFGNLKPSWNLRTNIAFQIARGLLYLHEDCSAQIIHCDIKPQNILLDDYYNARI  663 (813)
Q Consensus       584 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~~~~~ivH~dlk~~NIll~~~~~~kl  663 (813)
                      .+++.    ..+++|||+++..+.+       ++.....+++.|++++|+|||+.   +|+||||||+|||++++ .++|
T Consensus        79 ~~~~~----~~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~l  143 (191)
T d1zara2          79 VYAWE----GNAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWI  143 (191)
T ss_dssp             EEEEE----TTEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEE
T ss_pred             EEEec----CCEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEE
Confidence            88764    2379999999876543       34455678999999999999964   99999999999999965 5899


Q ss_pred             eeccCccccccCcccceeecccccccccCc------ccccCCCCCCccchhhHHHH
Q 045343          664 SDFGLAKLLTLNQSKAIRTAIRGTKGYVAP------EWFRNSTITAKVDVYSFGVL  713 (813)
Q Consensus       664 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aP------E~l~~~~~~~k~DVwS~Gvv  713 (813)
                      +|||+|+........          .|+..      |. ....++.++|+||..--
T Consensus       144 iDFG~a~~~~~~~~~----------~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         144 IDFPQSVEVGEEGWR----------EILERDVRNIITY-FSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             CCCTTCEETTSTTHH----------HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHH
T ss_pred             EECCCcccCCCCCcH----------HHHHHHHHHHHHH-HcCCCCCcccHHHHHHH
Confidence            999999776433221          11111      11 13457788999996543

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.79  E-value=1.2e-19  Score=158.61  Aligned_cols=106  Identities=21%  Similarity=0.369  Sum_probs=88.1

Q ss_pred             CCCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEee
Q 045343           27 NGTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTA  106 (813)
Q Consensus        27 ~~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~  106 (813)
                      +|+|.+||.|.+|+   +|.  +|.|.|.|+.+|         .|.|+..    .++||.||++.   + +..+.|.|+.
T Consensus         1 ~~~L~~g~~L~~G~---~l~--ng~~~l~~q~DG---------NLvly~~----~~~vW~s~~~~---~-~~~~~l~l~~   58 (108)
T d1jpca_           1 DNILYSGETLSTGE---FLN--YGSFVFIMQEDC---------NLVLYDV----DKPIWATNTGG---L-SRSCFLSMQT   58 (108)
T ss_dssp             CCEEETTEEECTTC---EEE--ETTEEEEECTTS---------CEEEEET----TEEEEECCCTT---S-CSSCEEEECT
T ss_pred             CCCccCCCEecCCC---EEE--cCCEEEEECCCC---------eEEEEeC----CceeeEeCCCC---C-CCccEEEEec
Confidence            47899999999998   785  699999999876         2666543    58899999883   2 3466899999


Q ss_pred             CccEEEeCCCCCEEeeeccCCCce-eEEEEecCcCEEEEecCCccccccccc
Q 045343          107 DHGLVLNDPQGKQVWSSEIDIGTV-AVGHMNDTGNFVLASSSSSKLWDSFSN  157 (813)
Q Consensus       107 ~g~l~l~~~~~~~~wst~~~~~~~-~~~~l~d~Gnlvl~~~~~~~~WqSFD~  157 (813)
                      ||+|+|++++|++||+|++..... .+|+|+|+|||||++.   .+||||+|
T Consensus        59 ~Gnlvl~~~~g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~---~~W~S~t~  107 (108)
T d1jpca_          59 DGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGT---DRWATGTH  107 (108)
T ss_dssp             TSCEEEECTTCCEEEECCCCCSCSCEEEEECTTSCEEEEEC---CCCCCCCC
T ss_pred             cceEEEECCCccceEEccccCCCCcEEEEEcCCCCEEEeCC---CcccCCCC
Confidence            999999999999999999764433 5789999999999964   59999987

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.79  E-value=1.5e-19  Score=157.86  Aligned_cols=106  Identities=22%  Similarity=0.360  Sum_probs=88.1

Q ss_pred             CCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeC
Q 045343           28 GTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTAD  107 (813)
Q Consensus        28 ~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~  107 (813)
                      |+|.+|+.|.+|+   +|++  |.|.|+|+..|         .|.++.    ..++||+||++   .+....+.|.|+.|
T Consensus         2 ~~L~~g~~L~~g~---~l~~--g~~~l~~q~dg---------nLvl~~----~~~~vW~ant~---~~~~~~~~l~l~~d   60 (109)
T d1kj1a_           2 NLLTNGEGLYAGQ---SLDV--EPYHFIMQEDC---------NLVLYD----HSTSVWASNTG---ILGKKGCKAVLQSD   60 (109)
T ss_dssp             CEEETTCEEETTC---EEEE--TTEEEEECTTS---------CEEEEE----TTEEEEECCCC---CTTCCCCEEEECTT
T ss_pred             CCccCCCEEeCCC---EEEe--CCEEEEecCCC---------eEEEEe----CCEEEEEeCCC---CCCceeEEEEEcCC
Confidence            7899999999998   8864  89999998765         255543    35889999998   44556788999999


Q ss_pred             ccEEEeCCCCCEEeeeccCC-CceeEEEEecCcCEEEEecCCccccccccc
Q 045343          108 HGLVLNDPQGKQVWSSEIDI-GTVAVGHMNDTGNFVLASSSSSKLWDSFSN  157 (813)
Q Consensus       108 g~l~l~~~~~~~~wst~~~~-~~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~  157 (813)
                      |+|||+|++|++||+|+++. .+..+|+|+|+|||||+++   .+|||+-|
T Consensus        61 GnLvl~~~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~---~~W~S~t~  108 (109)
T d1kj1a_          61 GNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGS---DIWSTGTY  108 (109)
T ss_dssp             SCEEEECSSSCEEEECCCCCCSSCCEEEECTTSCEEEECC---EEEECCCC
T ss_pred             ceEEEEeCCCcEEEEEeeECCCCCEEEEEeCCCcEEEECC---CEecCCCc
Confidence            99999999999999999864 4456899999999999964   59999865

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.71  E-value=7.2e-18  Score=149.54  Aligned_cols=101  Identities=22%  Similarity=0.294  Sum_probs=85.8

Q ss_pred             EEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCccc
Q 045343           73 IFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKL  151 (813)
Q Consensus        73 iw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~  151 (813)
                      |||.++++++.+|++|++.  +......+|.|+.||||+|++. +.+||++++...+ ...|.|+++|||||++.++++|
T Consensus        12 il~~~~~~~~~~~~l~~~q--~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~l   88 (120)
T d1dlpa2          12 ILYSTQGNDNHPQTLHATQ--SLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAV   88 (120)
T ss_dssp             ECCCC--CCCCCCEECSSC--CCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEE
T ss_pred             EEEcCCCCCCcccEEcCCC--eeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEE
Confidence            8999999999999999993  4445567899999999999985 6889999987654 3689999999999999999999


Q ss_pred             ccccccCcCcccCCCccccccceeecCCCCCCCCCceeEEeccCCcceec
Q 045343          152 WDSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLN  201 (813)
Q Consensus       152 WqSFD~PTDTlLpg~~l~~~~~L~S~~s~~dps~G~~~~~~~~~g~~~~~  201 (813)
                      ||||+                         +.++|.|.+.|++||++++|
T Consensus        89 W~S~t-------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          89 WTSGN-------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             EECCC-------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             EEeCC-------------------------CCCCCcEEEEECCCCcEEEe
Confidence            99984                         34678999999999999987

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.63  E-value=5.1e-17  Score=142.42  Aligned_cols=111  Identities=19%  Similarity=0.223  Sum_probs=92.6

Q ss_pred             EEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEeCCCCCEEeeeccCCCceeEEEEecCcCEEEEecCCcccc
Q 045343           73 IFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIGTVAVGHMNDTGNFVLASSSSSKLW  152 (813)
Q Consensus        73 iw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~~~~~~l~d~Gnlvl~~~~~~~~W  152 (813)
                      |||.--++.+..|..+.++  +......+|.|+.||||||++ .+.++|++++.+..++.+.|+|+|||||++.++++||
T Consensus         3 ~~~~~~~~~~~~~tl~~~~--~l~~g~~~l~~q~DGNLvL~~-~~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~~~vW   79 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQ--SLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRW   79 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTC--EECSTTEEEEECTTSCEEEEE-SSSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSC
T ss_pred             EEEecCCCCCCcceecCCC--cEEcCCEEEEECCCCeEEEEc-CCeeEEEcccCCCCceEEEEeccCCEEEEccCCCEEE
Confidence            6777667778888888873  444567789999999999998 5789999998877778999999999999999999999


Q ss_pred             cccccCcCcccCCCccccccceeecCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecccc
Q 045343          153 DSFSNPSDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTY  220 (813)
Q Consensus       153 qSFD~PTDTlLpg~~l~~~~~L~S~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (813)
                      ||+.                         +.++|.|.+.|++||++++|.         .++|.+++.
T Consensus        80 sS~t-------------------------~~~~g~y~l~Lq~DGNlvlY~---------~~~Wssgt~  113 (115)
T d1dlpa1          80 SSGT-------------------------KGSIGNYVLVLQPDRTVTIYG---------PGLWDSGTS  113 (115)
T ss_dssp             CCCC-------------------------CCCSSCCEEEECSSSCEEEEC---------SEEEECSCC
T ss_pred             EcCC-------------------------CCCCCCEEEEECCCCcEEEeC---------CCeecCCCC
Confidence            9873                         346899999999999998862         468988764

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.52  E-value=1.6e-14  Score=127.28  Aligned_cols=102  Identities=20%  Similarity=0.292  Sum_probs=78.9

Q ss_pred             CCcCCCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeC
Q 045343           28 GTVPVGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTAD  107 (813)
Q Consensus        28 ~~~~~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~  107 (813)
                      ++|.++|+|       .+++..|.|.|.|..+|.         |.+ |.   ..++||.+|+..   + +....|.|+.|
T Consensus        15 ~~l~~~q~l-------~~~~~~~~y~l~mQ~DGN---------LVL-y~---~~~~vWssnt~~---~-~~~~~l~l~~d   70 (119)
T d1b2pa_          15 QILHATESL-------EILFGTHVYRFIMQTDCN---------LVL-YD---NNNPIWATNTGG---L-GNGCRAVLQPD   70 (119)
T ss_dssp             CEEETTCEE-------EEEETTEEEEEEECTTSC---------EEE-EE---TTEEEEECCCTT---S-CSSCEEEECTT
T ss_pred             CEEeCCCeE-------EEecCCceEEEEECCCCc---------EEE-EE---CCeEEEEecCCC---C-CcceEEEEEeC
Confidence            455555555       346789999999998761         444 43   258899999872   2 34578999999


Q ss_pred             ccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccc
Q 045343          108 HGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFS  156 (813)
Q Consensus       108 g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD  156 (813)
                      |+|+|+|.+|.+||++++.... ..+|+|+|||||||++   ..+|||-.
T Consensus        71 GnLvL~d~~g~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg---~~~W~S~T  117 (119)
T d1b2pa_          71 GVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWATQT  117 (119)
T ss_dssp             SCEEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEECCC
T ss_pred             CCEEEECCCCcEEEECCCcCCCCceEEEEcCCCCEEEEC---CCEeccCC
Confidence            9999999999999999986543 4579999999999996   46999964

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.28  E-value=1.3e-12  Score=113.88  Aligned_cols=87  Identities=23%  Similarity=0.298  Sum_probs=68.5

Q ss_pred             CCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEEEeCCCCCEEeeeccCCC
Q 045343           49 SGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLVLNDPQGKQVWSSEIDIG  128 (813)
Q Consensus        49 ~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~l~~~~~~~~wst~~~~~  128 (813)
                      +|.|.|.|..+|         -|.|+.    ...+||.+|..     ....+++.|..||||||+|.++++||++.+...
T Consensus        25 ~g~~~l~~q~DG---------NLvL~~----~~~~vW~s~t~-----~~~~~~l~l~~dGNLvl~d~~~~~vWsS~t~~~   86 (115)
T d1dlpa1          25 LSSFRFTMQSDC---------NLVLFD----SDVRVWASNTA-----GATGCRAVLQSDGLLVILTAQNTIRWSSGTKGS   86 (115)
T ss_dssp             STTEEEEECTTS---------CEEEEE----SSSEEECCCCC-----SCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCCC
T ss_pred             cCCEEEEECCCC---------eEEEEc----CCeeEEEcccC-----CCCceEEEEeccCCEEEEccCCCEEEEcCCCCC
Confidence            588999998776         255643    25789988754     234677899999999999999999999998743


Q ss_pred             -ceeEEEEecCcCEEEEecCCcccccccc
Q 045343          129 -TVAVGHMNDTGNFVLASSSSSKLWDSFS  156 (813)
Q Consensus       129 -~~~~~~l~d~Gnlvl~~~~~~~~WqSFD  156 (813)
                       +..+++|++||||||++   ..+|+|-.
T Consensus        87 ~g~y~l~Lq~DGNlvlY~---~~~Wssgt  112 (115)
T d1dlpa1          87 IGNYVLVLQPDRTVTIYG---PGLWDSGT  112 (115)
T ss_dssp             SSCCEEEECSSSCEEEEC---SEEEECSC
T ss_pred             CCCEEEEECCCCcEEEeC---CCeecCCC
Confidence             34579999999999995   46999854

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.13  E-value=6.6e-11  Score=103.69  Aligned_cols=86  Identities=21%  Similarity=0.322  Sum_probs=69.5

Q ss_pred             eEEEEeeCccEEEeCCCCCEEeeeccCCCc-eeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeecC
Q 045343          100 SQVKLTADHGLVLNDPQGKQVWSSEIDIGT-VAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSRK  178 (813)
Q Consensus       100 ~~l~~~~~g~l~l~~~~~~~~wst~~~~~~-~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~~  178 (813)
                      =+|.+..||||||++. +.+||++++.+.+ .+.+.|+++|||||++.++.+||+|.-                      
T Consensus        32 y~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t----------------------   88 (119)
T d1b2pa_          32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV----------------------   88 (119)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC----------------------
T ss_pred             EEEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCC----------------------
Confidence            3688999999999975 5789999987554 468999999999999999999997632                      


Q ss_pred             CCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecccc
Q 045343          179 SETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTY  220 (813)
Q Consensus       179 s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (813)
                         .-+.|.|.+.|++||+++++.         .+.|.+++.
T Consensus        89 ---~~~~~~~~l~Lq~DGNlvlYg---------~~~W~S~T~  118 (119)
T d1b2pa_          89 ---AGKAGHYVLVLQPDRNVVIYG---------DALWATQTV  118 (119)
T ss_dssp             ---CCCSSCEEEEECTTSCEEEEE---------SEEEECCCC
T ss_pred             ---cCCCCceEEEEcCCCCEEEEC---------CCEeccCCc
Confidence               124578999999999999873         357887653

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.12  E-value=7.3e-11  Score=101.99  Aligned_cols=77  Identities=27%  Similarity=0.405  Sum_probs=64.4

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCCce-eEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceeec
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIGTV-AVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFSR  177 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~~~-~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S~  177 (813)
                      .-+|.+..||||||++ .+.+||++++...+. ..+.|+++|||||++.++++||+|                       
T Consensus        20 ~~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS-----------------------   75 (108)
T d1jpca_          20 SFVFIMQEDCNLVLYD-VDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWAS-----------------------   75 (108)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEEC-----------------------
T ss_pred             CEEEEECCCCeEEEEe-CCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEc-----------------------
Confidence            3578999999999997 558999999876543 589999999999999999999986                       


Q ss_pred             CCCCCCCCCceeEEeccCCcceec
Q 045343          178 KSETNFSRGRFQFRLLKDGNLVLN  201 (813)
Q Consensus       178 ~s~~dps~G~~~~~~~~~g~~~~~  201 (813)
                        .+...++.|.+.|++||+++++
T Consensus        76 --~t~~~~~~~~l~L~ddGNlVly   97 (108)
T d1jpca_          76 --NTGGQNGNYVCILQKDRNVVIY   97 (108)
T ss_dssp             --CCCCSCSCEEEEECTTSCEEEE
T ss_pred             --cccCCCCcEEEEEcCCCCEEEe
Confidence              1222557889999999999987

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.09  E-value=1.3e-10  Score=100.34  Aligned_cols=87  Identities=29%  Similarity=0.494  Sum_probs=69.0

Q ss_pred             ceEEEEeeCccEEEeCCCCCEEeeeccCCC--ceeEEEEecCcCEEEEecCCcccccccccCcCcccCCCccccccceee
Q 045343           99 GSQVKLTADHGLVLNDPQGKQVWSSEIDIG--TVAVGHMNDTGNFVLASSSSSKLWDSFSNPSDTLLPGQTMETKQGLFS  176 (813)
Q Consensus        99 ~~~l~~~~~g~l~l~~~~~~~~wst~~~~~--~~~~~~l~d~Gnlvl~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~L~S  176 (813)
                      .-.|.|..||||||++ .+.+||++++...  ....+.|+++|||||++++++++|+|=                     
T Consensus        20 ~~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~---------------------   77 (109)
T d1kj1a_          20 PYHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASH---------------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECC---------------------
T ss_pred             CEEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEe---------------------
Confidence            3568899999999987 5689999998643  346799999999999999999999871                     


Q ss_pred             cCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeecccc
Q 045343          177 RKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTY  220 (813)
Q Consensus       177 ~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (813)
                          +..+.|.|.+.|++||+++++-         ...|.++++
T Consensus        78 ----t~~~~~~~~l~L~ddGNlvly~---------~~~W~S~t~  108 (109)
T d1kj1a_          78 ----SVRGNGNYVLVLQEDGNVVIYG---------SDIWSTGTY  108 (109)
T ss_dssp             ----CCCCSSCCEEEECTTSCEEEEC---------CEEEECCCC
T ss_pred             ----eECCCCCEEEEEeCCCcEEEEC---------CCEecCCCc
Confidence                1124577899999999999872         347877654

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.03  E-value=3.1e-10  Score=99.67  Aligned_cols=98  Identities=18%  Similarity=0.246  Sum_probs=71.9

Q ss_pred             CCceeeecCCCceeecCCCcEEEeeeecCCCCCCCCcEEEEEEeeccCCCeeEEEecCCCCCCCCCCceEEEEeeCccEE
Q 045343           32 VGATLTAGTNSSTWLSPSGDFAFGFRQVDEENNTNDLFLLSIFYSNIPAKTVVWYTDNKDQNPAVPRGSQVKLTADHGLV  111 (813)
Q Consensus        32 ~~~~l~~~~~~~~lvS~~g~F~lGFf~~~~~~~~~~~~~lgiw~~~~~~~tvvWvanr~~~~~~~~~~~~l~~~~~g~l~  111 (813)
                      +.+.|..++   +|  ..|.|.|.|...|         .|.|+.    ...+||.++..    ..+....+.|..+||||
T Consensus        22 ~~~~l~~~q---~l--~~g~y~L~~q~DG---------NLvL~~----~~~~vW~s~t~----~~~~~~~~~l~~~GnLv   79 (120)
T d1dlpa2          22 HPQTLHATQ---SL--QLSPYRLSMETDC---------NLVLFD----RDDRVWSTNTA----GKGTGCRAVLQPNGRMD   79 (120)
T ss_dssp             CCCEECSSC---CC--BCSSCEEEEETTT---------EEEEEB----TTBCCSCCCCC----SSCSSCEEEEETTTEEE
T ss_pred             cccEEcCCC---ee--EcCCEEEEEcCCC---------cEEEec----CCcEEEEEccc----cCCCcEEEEEeCCeeEE
Confidence            345555555   44  3477999887655         466643    24678977643    22456789999999999


Q ss_pred             EeCCCCCEEeeeccCCC-ceeEEEEecCcCEEEEecCCcccccc
Q 045343          112 LNDPQGKQVWSSEIDIG-TVAVGHMNDTGNFVLASSSSSKLWDS  154 (813)
Q Consensus       112 l~~~~~~~~wst~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqS  154 (813)
                      |+|.++++||+|++... +...+.|++||||||++   ..+|.|
T Consensus        80 l~d~~~~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~---~~~W~t  120 (120)
T d1dlpa2          80 VLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYG---GALWTT  120 (120)
T ss_dssp             EEETTTEEEEECCCCCSSSCCEEEECSSSCEEEEC---CCCCBC
T ss_pred             EEcCCCCEEEEeCCCCCCCcEEEEECCCCcEEEeC---CCcccC
Confidence            99999999999998643 44579999999999995   468976

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.81  E-value=7e-09  Score=90.05  Aligned_cols=111  Identities=25%  Similarity=0.321  Sum_probs=78.0

Q ss_pred             cCcccCCCccccccceeecCCCCCCCCCceeEEeccCCcceeccccCCCCCCCCceeeccccCCCCCCCCceEEEeccCc
Q 045343          159 SDTLLPGQTMETKQGLFSRKSETNFSRGRFQFRLLKDGNLVLNIANLPTGDAYDAYYISGTYDPANSSNSGYRVMFNESG  238 (813)
Q Consensus       159 TDTlLpg~~l~~~~~L~S~~s~~dps~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (813)
                      ||||+|||.|..++.|++         |.|+|.++.||+|+++...       .++|.++....    .....+.++.++
T Consensus         1 tDtL~~gq~L~~g~~l~~---------g~~~l~~q~DGNLvly~~~-------~~vW~s~~~~~----~~~~~l~l~~dG   60 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDNN-------RAVWASGTNGK----ASGCVLKMQNDG   60 (112)
T ss_dssp             CCEEETTEEECTTCEEEE---------TTEEEEECTTSCEEEEETT-------EEEEECCCTTS----CSSEEEEECTTS
T ss_pred             CCEecCCCEecCCCEEEE---------CCEEEEEcCCCCEEEEcCC-------cEEEEccCccC----CCCcEEEEeccc
Confidence            899999999999999975         9999999999999987421       46887765432    234567888888


Q ss_pred             cEEEEecCCceeEeecccccCCcceEEEEEEeeCceeEEEeecCCCCCCeEEEEccccccc
Q 045343          239 YMYILRRNGGRFDLTTESVVPAADFYYRATLNFDGVFAQYFYPKNGNENWSVAWSEPENIC  299 (813)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~~~~~~~~~W~~~~~~p~d~C  299 (813)
                      .+.++...+. +-.+..   ......++++|..||+|++|.  ..    ....|+...+.|
T Consensus        61 nLvl~~~~~~-~w~s~t---~~~~~~~~l~L~ddGNlvly~--~~----~~~~W~S~t~~~  111 (112)
T d1xd5a_          61 NLVIYSGSRA-IWASNT---NRQNGNYYLILQRDRNVVIYD--NS----NNAIWATHTNVG  111 (112)
T ss_dssp             CEEEEETTEE-EEECCC---CCSCCCCEEEECTTSCEEEEC--TT----SCEEEECCCCCC
T ss_pred             cEEEEecCCe-EEEEee---ccCCCceEEEEcCCCCEEEEC--CC----CcEEecCCCccC
Confidence            8887765332 222211   122234689999999999983  11    245687665544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.94  E-value=1.1e-05  Score=80.78  Aligned_cols=132  Identities=16%  Similarity=0.063  Sum_probs=89.4

Q ss_pred             eeeeeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccc-cCCcceEEeEeecCCceEEEEeecCCCchhh
Q 045343          530 GSFGIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTH-HKNLVRLLGFCDEGQNRLLVYEFLNNGTLAS  608 (813)
Q Consensus       530 G~fG~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~lV~e~~~~gsL~~  608 (813)
                      ++...||+...     ++..+.||+...........+.+|...+..+. +--+.+++.+..+++..++||+++++..+.+
T Consensus        25 ~s~~~v~rv~~-----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~   99 (263)
T d1j7la_          25 MSPAKVYKLVG-----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE   99 (263)
T ss_dssp             CSSSEEEEEEC-----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred             CCCCcEEEEEe-----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccc
Confidence            34468998753     45567888876554444556778888877764 4446788888888888999999999988765


Q ss_pred             hhhccCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------------
Q 045343          609 FLFGNLKPSWNLRTNIAFQIARGLLYLHED--------------------------------------------------  638 (813)
Q Consensus       609 ~l~~~~~l~~~~~~~i~~~ia~gl~yLH~~--------------------------------------------------  638 (813)
                      .....     .....++.++++.++.||+.                                                  
T Consensus       100 ~~~~~-----~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (263)
T d1j7la_         100 EYEDE-----QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFL  174 (263)
T ss_dssp             HTTTC-----SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHH
T ss_pred             ccccc-----ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHH
Confidence            43211     11222344444444444421                                                  


Q ss_pred             ---C---CCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 ---C---SAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 ---~---~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                         .   ...++|+|+.|.|||++++...-|+||+.+..
T Consensus       175 ~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         175 KTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence               0   12379999999999999876677999988754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.34  E-value=0.00014  Score=71.75  Aligned_cols=138  Identities=15%  Similarity=0.052  Sum_probs=82.2

Q ss_pred             cceeee-eeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeecccc--CCcceEEeEeecCCceEEEEeecCC
Q 045343          527 VGRGSF-GIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHH--KNLVRLLGFCDEGQNRLLVYEFLNN  603 (813)
Q Consensus       527 LG~G~f-G~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~lV~e~~~~  603 (813)
                      +..|.. ..||+....    .+..+.+|.-..   .....+..|...++.+..  -.+.+++++..++...++||+++++
T Consensus        18 ~~~G~s~~~v~r~~~~----~~~~~vlK~~~~---~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQ----GRPVLFVKTDLS---GALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             CSCTTSSCEEEEEECT----TSCCEEEEEECS---CTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             cCCcccCCeEEEEEeC----CCCEEEEEeCCc---cCHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            444443 578987642    445577776543   233457778888877743  3356788888888889999999988


Q ss_pred             Cchhhhh-----------------hcc----CCCC--HHHHHHHH--------------------HHHHHHHHHhhhc--
Q 045343          604 GTLASFL-----------------FGN----LKPS--WNLRTNIA--------------------FQIARGLLYLHED--  638 (813)
Q Consensus       604 gsL~~~l-----------------~~~----~~l~--~~~~~~i~--------------------~~ia~gl~yLH~~--  638 (813)
                      ..+.+..                 +..    ....  +.....-.                    ......+..+.+.  
T Consensus        91 ~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  170 (255)
T d1nd4a_          91 QDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMP  170 (255)
T ss_dssp             EETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCC
T ss_pred             cccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCC
Confidence            7664321                 000    0000  00000000                    0011223333321  


Q ss_pred             --CCCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          639 --CSAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       639 --~~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                        ....++|+|+.|.|||++++..+-|+||+.+..
T Consensus       171 ~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         171 DGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             SSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence              123489999999999999887778999988754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.01  E-value=0.00077  Score=71.09  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=46.8

Q ss_pred             cccceeeeeeEEEEEEeccCCcceEEEEEEeecc-------ccccchhhhheeeeeeccc-c--CCcceEEeEeecCCce
Q 045343          525 EEVGRGSFGIVYKGVILTTRTSTTAVAVKKLDRV-------FQDGEKEFKNEVVVIGQTH-H--KNLVRLLGFCDEGQNR  594 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~~~~~~vavK~l~~~-------~~~~~~~~~~E~~~l~~l~-h--~niv~l~g~~~~~~~~  594 (813)
                      ++||.|....||+....   ..++.++||.-...       ......+...|.+.|+.+. +  ..+.+++.+  +++..
T Consensus        32 ~eig~G~~N~vfrV~~~---~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~  106 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQ---EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  106 (392)
T ss_dssp             EECCSSSSEEEEEEEC-------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             EEeCCCceEeEEEEEeC---CCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCC
Confidence            57899999999998753   23567888864321       0112233456777776663 2  345566655  34567


Q ss_pred             EEEEeecCCCc
Q 045343          595 LLVYEFLNNGT  605 (813)
Q Consensus       595 ~lV~e~~~~gs  605 (813)
                      ++|||++.+..
T Consensus       107 ~lvmE~L~~~~  117 (392)
T d2pula1         107 VTVMEDLSHLK  117 (392)
T ss_dssp             EEEECCCTTSE
T ss_pred             EEEEeccCCcc
Confidence            89999997654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.01  E-value=0.018  Score=60.27  Aligned_cols=76  Identities=13%  Similarity=0.205  Sum_probs=49.3

Q ss_pred             cccceeeeeeEEEEEEeccC----CcceEEEEEEeeccccccchhhhheeeeeeccccCCc-ceEEeEeecCCceEEEEe
Q 045343          525 EEVGRGSFGIVYKGVILTTR----TSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL-VRLLGFCDEGQNRLLVYE  599 (813)
Q Consensus       525 ~~LG~G~fG~Vykg~~~~~~----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~lV~e  599 (813)
                      +.|+.|-.-.+|+.......    .....|.++....  ........+|..+++.+.-.++ .++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            56788888899998875432    1234455555432  2233456678888888854455 478887754    68999


Q ss_pred             ecCCCch
Q 045343          600 FLNNGTL  606 (813)
Q Consensus       600 ~~~~gsL  606 (813)
                      |+++..|
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987554

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.016  Score=58.72  Aligned_cols=132  Identities=15%  Similarity=0.085  Sum_probs=73.5

Q ss_pred             eeEEEEEEeccCCcceEEEEEEeeccccccchhhhheeeeeeccccCCc--ceEEe-----EeecCCceEEEEeecCCCc
Q 045343          533 GIVYKGVILTTRTSTTAVAVKKLDRVFQDGEKEFKNEVVVIGQTHHKNL--VRLLG-----FCDEGQNRLLVYEFLNNGT  605 (813)
Q Consensus       533 G~Vykg~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~g-----~~~~~~~~~lV~e~~~~gs  605 (813)
                      -.||++.+.    ++..+++|..+.. ....+++..|...+..|....+  +..+.     ....+...+.++++++|..
T Consensus        36 N~vy~v~~~----dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDE----DRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCT----TCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcC----CCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            479988763    6777899986532 2245667788888877753332  11211     1233445788999987654


Q ss_pred             hhh-----h------h---h----c-----cCCCCHH-------------------HHHHHHHHHHHHHHHhh----hcC
Q 045343          606 LAS-----F------L---F----G-----NLKPSWN-------------------LRTNIAFQIARGLLYLH----EDC  639 (813)
Q Consensus       606 L~~-----~------l---~----~-----~~~l~~~-------------------~~~~i~~~ia~gl~yLH----~~~  639 (813)
                      +..     +      +   +    .     ....++.                   .+..+...+.+.+..+.    +..
T Consensus       111 ~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  190 (325)
T d1zyla1         111 FEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDF  190 (325)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccC
Confidence            321     0      0   0    0     0111111                   11112222222333332    223


Q ss_pred             CCCeeeCCCCCCcEEEcCCCCEEEeeccCccc
Q 045343          640 SAQIIHCDIKPQNILLDDYYNARISDFGLAKL  671 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~~~~kl~DfGla~~  671 (813)
                      ..+++|+|+.+.|||++++  ..++||+-+..
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            4679999999999999754  45899988754

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.021  Score=35.54  Aligned_cols=32  Identities=25%  Similarity=0.618  Sum_probs=24.2

Q ss_pred             cccccccCCCCCCCCCCCCcccCCCCCCCcccCCCCCccc
Q 045343          297 NICVNIGGEMGSGACGFNSICSLDSDRRPKCACPKGYSLL  336 (813)
Q Consensus       297 d~Cd~y~~~~~~~~CG~~g~C~~~~~~~~~C~Cl~GF~~~  336 (813)
                      |.|.+      -..|| ||-|+. ....-.|.|-+||+|.
T Consensus         2 dECsi------gnpCG-nGTCtN-viGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSV------GNPCG-NGTCKN-VIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGT------TCSSS-SSCEEE-CSSSEEECCSSSSCCC
T ss_pred             Ccccc------CCccC-Cceeee-cccceEEeecCCcCCC
Confidence            56877      57898 889974 2334479999999985

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.30  E-value=0.2  Score=49.90  Aligned_cols=31  Identities=26%  Similarity=0.315  Sum_probs=27.8

Q ss_pred             CCCeeeCCCCCCcEEEcCCCCEEEeeccCcc
Q 045343          640 SAQIIHCDIKPQNILLDDYYNARISDFGLAK  670 (813)
Q Consensus       640 ~~~ivH~dlk~~NIll~~~~~~kl~DfGla~  670 (813)
                      ..+++|+|+.+.||+++.+...-|.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            5689999999999999998777899999874

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=0.17  Score=33.63  Aligned_cols=28  Identities=25%  Similarity=0.666  Sum_probs=20.7

Q ss_pred             CCCCCCCCcccCCCCCCCcccCCCCCcccC
Q 045343          308 SGACGFNSICSLDSDRRPKCACPKGYSLLD  337 (813)
Q Consensus       308 ~~~CG~~g~C~~~~~~~~~C~Cl~GF~~~~  337 (813)
                      +..|. +++|.. +-.+-.|.|++||.+..
T Consensus         9 ~~~C~-~~~C~N-t~Gsy~C~C~~Gy~l~~   36 (42)
T d1lmja2           9 PLLCR-GGVCHN-TEGSYRCECPPGHQLSP   36 (42)
T ss_dssp             SSTTT-TSEEEE-ETTEEEEESCTTSCCCS
T ss_pred             CCCCC-CCEeEC-CCCCeEEeCCCCCeECc
Confidence            67885 789974 33344799999999753

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.85  E-value=0.21  Score=33.18  Aligned_cols=26  Identities=23%  Similarity=0.625  Sum_probs=20.7

Q ss_pred             CCCCCCCCcccCCCCCCCcccCCCCCc
Q 045343          308 SGACGFNSICSLDSDRRPKCACPKGYS  334 (813)
Q Consensus       308 ~~~CG~~g~C~~~~~~~~~C~Cl~GF~  334 (813)
                      +..|..+|.|.. ...+-.|.|++||+
T Consensus        10 ~~pC~n~g~C~n-~~g~y~C~C~~G~~   35 (42)
T d2vj3a1          10 ANPCEHAGKCIN-TLGSFECQCLQGYT   35 (42)
T ss_dssp             SCSSSTTCEEEE-CSSSEEEECCTTEE
T ss_pred             CCCCCCCcEeEC-CCCCEEeECCCCCc
Confidence            468999999974 33445899999996

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.15  E-value=0.52  Score=31.31  Aligned_cols=26  Identities=31%  Similarity=0.612  Sum_probs=19.5

Q ss_pred             CCCCCCCcccCCCCCCCcccCCCCCcc
Q 045343          309 GACGFNSICSLDSDRRPKCACPKGYSL  335 (813)
Q Consensus       309 ~~CG~~g~C~~~~~~~~~C~Cl~GF~~  335 (813)
                      ..|+.++.|.. +..+-.|.|++||+.
T Consensus        11 ~~~~~~~~C~N-t~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1          11 PDVCKHGQCIN-TDGSYRCECPFGYIL   36 (43)
T ss_dssp             TTSCSSSCCCC-CSSCCCCCCCTTEEE
T ss_pred             cCCCCCCEeEC-CCCCeEeECCCCccc
Confidence            45667899974 344558999999986