Query 045346
Match_columns 352
No_of_seqs 394 out of 4089
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 21:52:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.5E-33 1.2E-37 230.7 17.7 157 24-191 6-162 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 1.4E-33 4.7E-38 250.8 13.8 173 6-188 70-242 (269)
3 3hra_A Ankyrin repeat family p 100.0 1.3E-32 4.5E-37 233.2 18.3 177 2-188 19-201 (201)
4 1oy3_D Transcription factor in 100.0 2.6E-32 9E-37 243.2 19.1 183 2-195 23-255 (282)
5 3aji_A 26S proteasome non-ATPa 100.0 6.4E-32 2.2E-36 234.0 20.9 182 2-194 20-201 (231)
6 2rfa_A Transient receptor pote 100.0 2.1E-32 7.1E-37 237.3 17.5 181 2-191 17-223 (232)
7 2f8y_A Notch homolog 1, transl 100.0 1.1E-31 3.7E-36 231.3 20.6 165 19-193 22-186 (223)
8 2rfm_A Putative ankyrin repeat 100.0 3.5E-32 1.2E-36 229.2 16.8 167 11-188 24-190 (192)
9 4gpm_A Engineered protein OR26 100.0 6.3E-32 2.1E-36 223.1 16.8 147 2-157 18-164 (169)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 8E-32 2.7E-36 237.1 18.4 184 2-195 37-220 (253)
11 2dzn_A Probable 26S proteasome 100.0 3.5E-31 1.2E-35 228.8 20.7 184 2-195 16-205 (228)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 9.7E-32 3.3E-36 236.6 17.5 176 2-188 71-246 (253)
13 3aji_A 26S proteasome non-ATPa 100.0 1.6E-31 5.6E-36 231.4 18.0 176 2-189 54-229 (231)
14 1k1a_A B-cell lymphoma 3-encod 100.0 6.2E-31 2.1E-35 229.0 20.7 181 2-193 23-211 (241)
15 2xai_A ASB-9, ankyrin repeat a 100.0 5.3E-31 1.8E-35 233.0 19.5 179 2-194 17-195 (261)
16 3b7b_A Euchromatic histone-lys 100.0 1E-30 3.5E-35 227.3 20.5 182 2-194 25-206 (237)
17 2f8y_A Notch homolog 1, transl 100.0 1.3E-31 4.5E-36 230.8 14.3 180 2-192 39-218 (223)
18 3utm_A Tankyrase-1; tankyrase, 100.0 6E-31 2.1E-35 241.4 19.6 187 2-195 38-310 (351)
19 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-31 9E-36 231.2 15.8 172 12-193 35-212 (236)
20 2etb_A Transient receptor pote 100.0 3.9E-31 1.3E-35 232.9 14.8 177 8-191 25-247 (256)
21 3d9h_A CDNA FLJ77766, highly s 100.0 5.4E-30 1.8E-34 229.6 21.9 178 2-193 73-250 (285)
22 3b7b_A Euchromatic histone-lys 100.0 2.1E-30 7.3E-35 225.3 18.2 176 2-185 58-234 (237)
23 3v31_A Ankyrin repeat family A 100.0 1.8E-30 6.3E-35 213.7 16.8 157 21-188 2-158 (167)
24 1s70_B 130 kDa myosin-binding 100.0 1.8E-30 6.2E-35 233.6 18.0 183 2-192 54-259 (299)
25 3ljn_A Hypothetical protein; a 100.0 1.8E-30 6.3E-35 240.4 18.2 175 2-190 34-236 (364)
26 2dzn_A Probable 26S proteasome 100.0 2.8E-30 9.6E-35 223.0 18.0 163 2-172 50-218 (228)
27 4hbd_A KN motif and ankyrin re 100.0 1.2E-30 4.3E-35 232.7 16.0 166 14-188 103-273 (276)
28 2xai_A ASB-9, ankyrin repeat a 100.0 2.9E-30 9.9E-35 228.3 18.1 174 2-191 50-223 (261)
29 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.1E-30 1.1E-34 212.9 16.6 161 17-188 9-169 (169)
30 1k1a_A B-cell lymphoma 3-encod 100.0 1.6E-30 5.4E-35 226.4 15.5 175 2-188 60-239 (241)
31 4g8k_A 2-5A-dependent ribonucl 100.0 4.6E-30 1.6E-34 235.2 19.3 187 2-193 39-301 (337)
32 4b93_B Ankyrin repeat domain-c 100.0 1.3E-30 4.5E-35 231.6 15.1 181 2-193 25-213 (269)
33 1wdy_A 2-5A-dependent ribonucl 100.0 1.1E-29 3.7E-34 226.1 20.9 180 2-192 53-247 (285)
34 3twr_A Tankyrase-2; ankyrin re 100.0 1.6E-30 5.5E-35 213.6 14.3 161 18-189 4-164 (165)
35 3v30_A DNA-binding protein rfx 100.0 4.7E-30 1.6E-34 212.2 16.5 161 22-192 2-162 (172)
36 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.1E-30 1.1E-34 211.0 15.1 159 20-190 3-162 (162)
37 1oy3_D Transcription factor in 100.0 4.4E-30 1.5E-34 228.7 17.4 174 15-194 2-221 (282)
38 2pnn_A Transient receptor pote 100.0 1.5E-30 5.1E-35 231.5 13.4 185 2-193 27-262 (273)
39 1sw6_A Regulatory protein SWI6 100.0 1.5E-30 5E-35 237.9 13.0 166 4-172 112-326 (327)
40 3f6q_A Integrin-linked protein 100.0 1.1E-29 3.7E-34 211.6 17.0 165 20-194 3-167 (179)
41 3jxi_A Vanilloid receptor-rela 100.0 1.3E-30 4.4E-35 230.0 11.3 176 10-192 30-252 (260)
42 1awc_B Protein (GA binding pro 100.0 1.2E-29 4E-34 205.9 15.6 151 22-184 2-152 (153)
43 3kea_A K1L; tropism, ANK repea 100.0 4.6E-30 1.6E-34 230.1 14.3 170 3-188 14-184 (285)
44 1wdy_A 2-5A-dependent ribonucl 100.0 7.9E-29 2.7E-33 220.5 21.8 184 2-193 19-214 (285)
45 3v30_A DNA-binding protein rfx 100.0 1.4E-29 4.7E-34 209.4 15.4 156 2-165 16-171 (172)
46 2rfa_A Transient receptor pote 100.0 3.3E-29 1.1E-33 217.1 18.0 165 21-192 2-185 (232)
47 3d9h_A CDNA FLJ77766, highly s 100.0 3.5E-29 1.2E-33 224.3 18.1 170 2-187 106-275 (285)
48 2fo1_E LIN-12 protein; beta-ba 100.0 2.5E-29 8.6E-34 233.8 17.7 178 8-195 152-343 (373)
49 3eu9_A Huntingtin-interacting 100.0 5.5E-29 1.9E-33 216.1 18.6 183 2-194 23-206 (240)
50 1n11_A Ankyrin; clathrin, BAND 100.0 2.5E-29 8.5E-34 238.4 17.9 179 3-193 194-372 (437)
51 1n11_A Ankyrin; clathrin, BAND 100.0 4.9E-29 1.7E-33 236.3 19.8 180 2-193 160-339 (437)
52 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-29 1.2E-33 232.9 17.3 179 2-190 180-371 (373)
53 3kea_A K1L; tropism, ANK repea 100.0 2.5E-29 8.4E-34 225.3 15.3 178 2-195 45-225 (285)
54 3eu9_A Huntingtin-interacting 100.0 1.7E-28 5.7E-33 213.0 18.2 178 2-191 56-236 (240)
55 1ikn_D Protein (I-kappa-B-alph 100.0 1.8E-29 6.1E-34 219.6 12.0 172 16-193 2-179 (236)
56 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.6E-29 2.9E-33 201.2 15.2 153 22-186 2-154 (156)
57 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-28 8.4E-33 224.0 19.4 172 2-188 72-332 (351)
58 3ljn_A Hypothetical protein; a 100.0 1.2E-28 4E-33 228.3 14.9 171 11-190 9-198 (364)
59 3hra_A Ankyrin repeat family p 100.0 9.4E-28 3.2E-32 203.2 19.2 171 19-194 2-174 (201)
60 1s70_B 130 kDa myosin-binding 100.0 1.4E-28 4.8E-33 221.2 14.1 163 2-172 87-275 (299)
61 3f6q_A Integrin-linked protein 100.0 3.3E-28 1.1E-32 202.6 12.8 153 2-162 19-171 (179)
62 1bi7_B P16INK4A, MTS1, multipl 100.0 2.2E-28 7.6E-33 199.1 10.9 146 15-169 5-151 (156)
63 2etb_A Transient receptor pote 100.0 3.4E-28 1.2E-32 214.1 11.4 165 21-191 1-207 (256)
64 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.5E-27 1.5E-31 193.9 16.8 142 2-152 28-169 (169)
65 1d9s_A Cyclin-dependent kinase 99.9 6.7E-28 2.3E-32 191.6 11.3 134 12-154 2-136 (136)
66 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.4E-27 4.8E-32 195.1 13.5 143 2-154 19-162 (162)
67 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.5E-28 1.2E-32 212.1 9.7 161 19-191 2-165 (239)
68 2pnn_A Transient receptor pote 99.9 7.4E-28 2.5E-32 214.0 11.6 176 12-192 3-220 (273)
69 3v31_A Ankyrin repeat family A 99.9 5E-27 1.7E-31 193.0 15.4 145 2-155 17-161 (167)
70 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-26 3.6E-31 212.9 18.8 175 2-192 139-328 (337)
71 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-26 3.5E-31 188.9 15.3 139 2-149 16-154 (156)
72 3twr_A Tankyrase-2; ankyrin re 99.9 3.4E-27 1.2E-31 193.7 12.0 143 2-153 22-164 (165)
73 1awc_B Protein (GA binding pro 99.9 2.1E-26 7.3E-31 186.6 16.0 135 2-145 16-150 (153)
74 2rfm_A Putative ankyrin repeat 99.9 1.6E-26 5.5E-31 194.5 14.9 140 2-149 49-188 (192)
75 2vge_A RELA-associated inhibit 99.9 1.2E-27 4.1E-32 207.4 7.5 160 4-172 1-166 (229)
76 2vge_A RELA-associated inhibit 99.9 2.9E-28 9.8E-33 211.3 2.7 162 2-175 35-201 (229)
77 3t8k_A Uncharacterized protein 99.9 4.2E-27 1.4E-31 197.3 8.1 153 22-186 6-175 (186)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.9E-27 3.1E-31 203.2 10.1 163 2-174 19-193 (239)
79 1sw6_A Regulatory protein SWI6 99.9 3.1E-26 1.1E-30 209.2 13.1 160 25-194 100-312 (327)
80 3jxi_A Vanilloid receptor-rela 99.9 3.4E-26 1.2E-30 201.6 12.8 168 19-191 2-211 (260)
81 1d9s_A Cyclin-dependent kinase 99.9 7.2E-26 2.5E-30 179.8 11.9 130 50-190 6-136 (136)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-25 7.8E-30 173.7 14.5 126 21-154 1-126 (126)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 178.5 12.6 128 17-152 9-136 (136)
84 3c5r_A BARD-1, BRCA1-associate 99.9 4.1E-26 1.4E-30 181.4 7.3 121 17-144 5-125 (137)
85 4hbd_A KN motif and ankyrin re 99.9 5.3E-25 1.8E-29 196.1 14.0 145 2-152 125-274 (276)
86 3deo_A Signal recognition part 99.9 4E-25 1.4E-29 184.7 11.3 141 18-187 40-181 (183)
87 3t8k_A Uncharacterized protein 99.9 1.9E-25 6.7E-30 187.1 8.4 147 3-159 21-184 (186)
88 3c5r_A BARD-1, BRCA1-associate 99.9 5.1E-25 1.8E-29 175.0 9.7 128 51-188 5-132 (137)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-24 6.2E-29 171.7 12.1 125 55-188 12-136 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5E-24 1.7E-28 166.0 14.1 126 56-190 1-126 (126)
91 3ui2_A Signal recognition part 99.9 1.2E-24 4.2E-29 190.2 11.9 142 18-188 41-183 (244)
92 3ehr_A Osteoclast-stimulating 99.9 2.5E-25 8.4E-30 191.6 7.3 140 15-162 66-206 (222)
93 3aaa_C Myotrophin, protein V-1 99.9 2.2E-24 7.4E-29 168.1 10.0 111 19-136 4-114 (123)
94 1bi7_B P16INK4A, MTS1, multipl 99.9 3E-24 1E-28 174.6 10.1 134 51-195 7-141 (156)
95 2b0o_E UPLC1; arfgap, structur 99.9 7.7E-24 2.6E-28 190.9 12.2 141 21-175 150-299 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 1.4E-23 4.9E-28 163.5 10.7 111 55-171 5-115 (123)
97 2aja_A Ankyrin repeat family p 99.9 1.7E-24 5.9E-29 200.5 0.9 156 17-189 87-249 (376)
98 3ehr_A Osteoclast-stimulating 99.9 4.9E-23 1.7E-27 177.2 8.8 167 18-193 21-201 (222)
99 3deo_A Signal recognition part 99.9 1E-23 3.4E-28 176.1 3.4 136 30-173 8-154 (183)
100 3lvq_E ARF-GAP with SH3 domain 99.9 5.5E-22 1.9E-26 191.0 14.2 138 22-167 132-278 (497)
101 3jue_A Arfgap with coiled-coil 99.9 5.3E-22 1.8E-26 183.2 12.4 148 19-172 196-347 (368)
102 1dcq_A PYK2-associated protein 99.9 3.8E-21 1.3E-25 171.3 16.9 167 18-192 62-265 (278)
103 2b0o_E UPLC1; arfgap, structur 99.9 5.2E-22 1.8E-26 178.9 11.0 126 2-141 165-299 (301)
104 3ui2_A Signal recognition part 99.9 2.2E-23 7.4E-28 182.3 0.5 142 20-173 13-155 (244)
105 2l6b_A NR1C; ankyrin, consensu 99.9 8E-22 2.7E-26 151.5 9.0 107 18-131 5-111 (115)
106 2aja_A Ankyrin repeat family p 99.9 5E-23 1.7E-27 190.7 0.8 154 2-175 106-267 (376)
107 1dcq_A PYK2-associated protein 99.9 2.2E-21 7.6E-26 172.8 11.4 126 22-154 130-263 (278)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.7E-21 1.3E-25 142.0 10.7 89 21-112 1-89 (93)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.7E-21 1.9E-25 141.0 10.8 93 56-154 1-93 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-21 8.5E-26 148.7 9.2 109 51-166 4-112 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.8 6.2E-20 2.1E-24 176.7 13.6 128 57-193 132-268 (497)
112 3jue_A Arfgap with coiled-coil 99.8 5.5E-20 1.9E-24 169.7 11.5 126 55-189 197-325 (368)
113 2zgd_A 3 repeat synthetic anky 99.8 5.1E-19 1.7E-23 134.8 9.7 96 12-110 14-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 9.3E-18 3.2E-22 127.8 9.1 90 50-145 18-107 (110)
115 2lx0_A Membrane fusion protein 58.7 17 0.0006 18.8 3.6 22 329-350 5-26 (32)
116 2iub_A CORA, divalent cation t 47.0 93 0.0032 27.6 9.1 22 303-324 304-325 (363)
117 4ev6_A Magnesium transport pro 44.1 30 0.001 30.5 5.3 22 303-324 280-301 (339)
118 3mkq_B Coatomer subunit alpha; 30.3 89 0.003 24.7 5.4 107 23-151 9-115 (177)
119 1gp8_A Protein (scaffolding pr 20.8 67 0.0023 18.2 2.1 17 26-42 17-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.5e-33 Score=230.65 Aligned_cols=157 Identities=25% Similarity=0.227 Sum_probs=145.0
Q ss_pred hHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCC
Q 045346 24 TPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFR 103 (352)
Q Consensus 24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 103 (352)
++|+.||+.|+.++|+.|+++|+++ +.+| .+|.||||+|+..++.++++.|++.++++ +.+|.+|+||||+|+.+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASD-SDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 4799999999999999999999998 8899 89999999999999999999999999998 8899999999999999999
Q ss_pred HHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHH
Q 045346 104 VEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKL 183 (352)
Q Consensus 104 ~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~ 183 (352)
.+++++|++ .|+++|.+|.+|+||||+|++.|+.++++ +|.+.|++++.+|++|+||||+|+..++. +++++
T Consensus 83 ~~~v~~Ll~----~gadvn~~d~~G~TpLh~A~~~g~~~~v~-~Ll~~gad~~~~d~~G~TpL~~A~~~g~~---~iv~~ 154 (169)
T 4gpm_A 83 KEVVKLLIS----KGADVNAKDSDGRTPLHHAAENGHKEVVK-LLISKGADVNTSDSDGRTPLDLAREHGNE---EVVKL 154 (169)
T ss_dssp HHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHH
T ss_pred HHHHHHHHH----CcCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCccccCCCCCCHHHHHHHcCCH---HHHHH
Confidence 999999999 78999999999999999999999999994 55569999999999999999999999765 89999
Q ss_pred HHHcCCCC
Q 045346 184 SKDFGRGQ 191 (352)
Q Consensus 184 l~~~g~~~ 191 (352)
|.+.|+.-
T Consensus 155 Ll~~GA~i 162 (169)
T 4gpm_A 155 LEKQGGWL 162 (169)
T ss_dssp HHTC----
T ss_pred HHHCCCCc
Confidence 99998754
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=250.84 Aligned_cols=173 Identities=24% Similarity=0.224 Sum_probs=150.6
Q ss_pred HHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccc
Q 045346 6 KLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYE 85 (352)
Q Consensus 6 ~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~ 85 (352)
++|...|+++|.+|.+|+||||+|+..|+.+++++|++.++++ +.++ ..|.||+|+|+..++.++++.|++.++++ +
T Consensus 70 ~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n 146 (269)
T 4b93_B 70 AKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARN-ADQAVPLHLACQQGHFQVVKCLLDSNAKP-N 146 (269)
T ss_dssp -----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCS-C
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccC-CCCCCccccccccChHHHHHHHHHCCCCC-C
Confidence 3444589999999999999999999999999999999999998 8888 79999999999999999999999999998 8
Q ss_pred cccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcch
Q 045346 86 LVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSV 165 (352)
Q Consensus 86 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tp 165 (352)
.+|..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+.++++ +|.++|+|++.+|++|+||
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~----~gadvn~~~~~g~t~Lh~A~~~g~~~~v~-~Ll~~Gad~~~~d~~G~Tp 221 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQ----HGASINASNNKGNTALHEAVIEKHVFVVE-LLLLHGASVQVLNKRQRTA 221 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCS
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHH----CCCCCCccccCCCcHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCCH
Confidence 899999999999999999999999999 78999999999999999999999999995 5556899999999999999
Q ss_pred HHHHhhcCCCcHHHHHHHHHHcC
Q 045346 166 RHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 166 l~~a~~~~~~~~~~i~~~l~~~g 188 (352)
||+|+.++ ...++++.+.+.+
T Consensus 222 L~~A~~~~--~i~~lL~~l~~~~ 242 (269)
T 4b93_B 222 VDCAEQNS--KIMELLQVVPSCV 242 (269)
T ss_dssp GGGSCTTC--HHHHHTTC-----
T ss_pred HHHHHhCC--cHHHHHHHHHHhc
Confidence 99998764 2334444444433
No 3
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-32 Score=233.16 Aligned_cols=177 Identities=15% Similarity=0.186 Sum_probs=160.5
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
+.+++++...+.+++.+|.+|+||||+|++.|+.+++++|+++++++ +.++ ..|.||||+|+..|+.+++++|++.+.
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 96 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQN-SISDSPYLYAGAQGRTEILAYMLKHAT 96 (201)
T ss_dssp HHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 57889998888799999999999999999999999999999999998 8888 899999999999999999999996655
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhh-hhhccCCCCCCcHHHHHHhcCC-----hHHHHHHHhhcCccc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLAR-SLINEGDAMENTPLHVLAAVRP-----KEFHAVMIKKTQANY 155 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~-~~~n~~d~~G~T~Lh~A~~~~~-----~~~~~~lL~~~g~~~ 155 (352)
...+..|..|.||||+|+.+|+.+++++|++ .+ .+++.+|.+|+||||+|+..++ .+++ ++|.+.|+++
T Consensus 97 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v-~~Ll~~ga~~ 171 (201)
T 3hra_A 97 PDLNKHNRYGGNALIPAAEKGHIDNVKLLLE----DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV-KLLMENGADQ 171 (201)
T ss_dssp CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH----HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH-HHHHHTTCCT
T ss_pred cccccccCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH-HHHHHCCCCC
Confidence 4448899999999999999999999999999 56 7899999999999999999887 6777 5666789999
Q ss_pred cccccCCcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 156 DAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 156 ~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
+.+|.+|+||+|+|+..++. +++++|.+.|
T Consensus 172 ~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~G 201 (201)
T 3hra_A 172 SIKDNSGRTAMDYANQKGYT---EISKILAQYN 201 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCH---HHHHHHHTCC
T ss_pred CccCCCCCCHHHHHHHcCCH---hHHHHHHhcC
Confidence 99999999999999999766 8888888765
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.6e-32 Score=243.19 Aligned_cols=183 Identities=21% Similarity=0.199 Sum_probs=162.0
Q ss_pred HHHHHHHHhcccc---ccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHh
Q 045346 2 AALRKLVEEKKKM---IKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILS 78 (352)
Q Consensus 2 e~v~~lL~~~~~~---~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 78 (352)
++++.|+. .+.+ ++.+|..|+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++|++
T Consensus 23 ~~v~~Ll~-~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~ 99 (282)
T 1oy3_D 23 PFLDFLLG-FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAE-RGGHTALHLACRVRAHTCACVLLQ 99 (282)
T ss_dssp HHHHHHHH-HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCC-TTSCCHHHHHTTTTCHHHHHHHSS
T ss_pred HHHHHHHh-cCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCcchhHhhhc
Confidence 56777776 4444 8899999999999999999999999999999998 8888 799999999999999999999999
Q ss_pred hCCCc----------------------------------------------cccccCCCCchhHHHHhcCCHHHHHHHHh
Q 045346 79 LSPDC----------------------------------------------YELVDNKGWNFLHYAMVSFRVEQLTNLLE 112 (352)
Q Consensus 79 ~~~~~----------------------------------------------~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 112 (352)
++++. .+..|..|+||||+|+.+|+.+++++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 179 (282)
T 1oy3_D 100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179 (282)
T ss_dssp SCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 87652 25678899999999999999999999999
Q ss_pred cCchhhhhhccCCCC-CCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCC
Q 045346 113 NNPLARSLINEGDAM-ENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 113 ~~~~~~~~~n~~d~~-G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~ 191 (352)
.|.+++.+|.. |+||||+|+..|+.++++ +|.++|++++.+|.+|+||||+|+..++. +++++|.+.|+.+
T Consensus 180 ----~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 180 ----AGADLNKPEPTCGRTPLHLAVEAQAASVLE-LLLKAGADPTARMYGGRTPLGSALLRPNP---ILARLLRAHGAPE 251 (282)
T ss_dssp ----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHTSSCH---HHHHHHHHTTCCC
T ss_pred ----cCCCCCCCCCCCCcCHHHHHHHcCCHHHHH-HHHHcCCCCcccccCCCCHHHHHHHcCCc---HHHHHHHHcCCCc
Confidence 78899999865 999999999999999985 55568999999999999999999999665 8999999998877
Q ss_pred CCcc
Q 045346 192 YSNG 195 (352)
Q Consensus 192 ~~~~ 195 (352)
....
T Consensus 252 ~~~~ 255 (282)
T 1oy3_D 252 PEDG 255 (282)
T ss_dssp CCCC
T ss_pred CcCC
Confidence 6543
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.4e-32 Score=233.99 Aligned_cols=182 Identities=24% Similarity=0.278 Sum_probs=169.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|.+++++...+..++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 20 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 97 (231)
T 3aji_A 20 DELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKD-DAGWSPLHIAASAGXDEIVKALLVKGA 97 (231)
T ss_dssp HHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcC-CCCCCHHHHHHHcCHHHHHHHHHHcCC
Confidence 67899999888889999999999999999999999999999999888 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|..|.||||+|+..++.+++++|++ .+.+++.+|..|+||||+|+..|+.++++ +|.+.|++++.+|.+
T Consensus 98 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~ 171 (231)
T 3aji_A 98 HV-NAVNQNGCTPLHYAASKNRHEIAVMLLE----GGANPDAKDHYDATAMHRAAAKGNLKMVH-ILLFYKASTNIQDTE 171 (231)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHHH-HHHHTTCCSCCCCTT
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHHcCCHHHHH-HHHhcCCCccccCCC
Confidence 98 8889999999999999999999999999 78889999999999999999999999985 555699999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
|+||+|+|+..++. +++++|.+.|.++...
T Consensus 172 g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~ 201 (231)
T 3aji_A 172 GNTPLHLACDEERV---EEAKFLVTQGASIYIE 201 (231)
T ss_dssp SCCHHHHHHHTTCH---HHHHHHHHTTCCSCCC
T ss_pred CCCHHHHHHHCCCH---HHHHHHHHCCCCCCCC
Confidence 99999999999765 8999999999877543
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-32 Score=237.35 Aligned_cols=181 Identities=20% Similarity=0.160 Sum_probs=160.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCcc----ccccCCCCCcHHHHHHhcCcHHHHHHHH
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSAS----NIANKDRKMTALHLAAGRGHARTVETIL 77 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 77 (352)
++++.|++..|.+++.+|..|+||||+|+..|+.+++++|++++++.. +.++ ..|.||||+|+..|+.+++++|+
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll 95 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL-YEGQTALHIAVINQNVNLVRALL 95 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC-CCCcCHHHHHHHcCCHHHHHHHH
Confidence 578888887799999999999999999999999999999999987753 3445 68999999999999999999999
Q ss_pred hhCCCccccccC-------------CCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHH
Q 045346 78 SLSPDCYELVDN-------------KGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFH 144 (352)
Q Consensus 78 ~~~~~~~~~~d~-------------~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~ 144 (352)
++++++ +..+. +|+||||+|+..|+.+++++|++ .|.++|.+|.+|+||||+|+..++.+.+
T Consensus 96 ~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t~L~~A~~~~~~~~~ 170 (232)
T 2rfa_A 96 ARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE----HGADIRAQDSLGNTVLHILILQPNKTFA 170 (232)
T ss_dssp HTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHTCSCHHHH
T ss_pred hCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCChHHH
Confidence 999988 55544 79999999999999999999999 7889999999999999999999998876
Q ss_pred H---HHHhhcCccc------cccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCC
Q 045346 145 A---VMIKKTQANY------DAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 145 ~---~lL~~~g~~~------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~ 191 (352)
. ++|.+.|++. +.+|.+|+||+|+|+..++. +++++|.++|..+
T Consensus 171 ~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~---~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 171 CQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI---VMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH---HHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH---HHHHHHHhcCccc
Confidence 2 5666789887 68999999999999999766 8999999877544
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.1e-31 Score=231.27 Aligned_cols=165 Identities=23% Similarity=0.197 Sum_probs=102.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHH
Q 045346 19 DQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYA 98 (352)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (352)
|.+|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|++.++...+..|..|+||||+|
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 99 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADA-NIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILA 99 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHH
Confidence 566666666666666666666666666655 5555 56666666666666666666666666533355666666666666
Q ss_pred HhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHH
Q 045346 99 MVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKE 178 (352)
Q Consensus 99 ~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~ 178 (352)
+..++.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|..|.||+|+|+..++.
T Consensus 100 ~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--- 171 (223)
T 2f8y_A 100 ARLAVEGMLEDLIN----SHADVNAVDDLGKSALHWAAAVNNVDAAV-VLLKNGANKDMQNNREETPLFLAAREGSY--- 171 (223)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCH---
T ss_pred HHhCcHHHHHHHHH----cCCCCcCcCCCCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCcCHHHHHHHcCCH---
Confidence 66666666666666 45556666666666666666666666653 33345666666666666666666666443
Q ss_pred HHHHHHHHcCCCCCC
Q 045346 179 EIQKLSKDFGRGQYS 193 (352)
Q Consensus 179 ~i~~~l~~~g~~~~~ 193 (352)
+++++|.+.|..+..
T Consensus 172 ~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 172 ETAKVLLDHFANRDI 186 (223)
T ss_dssp HHHHHHHHTTCCTTC
T ss_pred HHHHHHHHcCCCCcc
Confidence 566666666555443
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.5e-32 Score=229.24 Aligned_cols=167 Identities=19% Similarity=0.136 Sum_probs=154.1
Q ss_pred ccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCC
Q 045346 11 KKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNK 90 (352)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 90 (352)
.+..+|.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +..|..
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 100 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKD-IEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFS 100 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTT
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-cccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCC
Confidence 34567899999999999999999999999999999887 7888 79999999999999999999999999998 888999
Q ss_pred CCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHh
Q 045346 91 GWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFS 170 (352)
Q Consensus 91 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~ 170 (352)
|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLE----HGANVNDRNLEGETPLIVASKYGRSEIVK-KLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH----TTCCSSCCCTTCCCHHHHHHHHTCHHHHH-HHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999 78899999999999999999999999985 555689999999999999999999
Q ss_pred hcCCCcHHHHHHHHHHcC
Q 045346 171 YGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 171 ~~~~~~~~~i~~~l~~~g 188 (352)
..++. +++++|.+.|
T Consensus 176 ~~~~~---~~v~~Ll~~~ 190 (192)
T 2rfm_A 176 IFGRQ---EVIKIFTEVR 190 (192)
T ss_dssp HTTCH---HHHHHHHHHH
T ss_pred HhCcH---HHHHHHHhcc
Confidence 99766 8888887754
No 9
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=6.3e-32 Score=223.13 Aligned_cols=147 Identities=26% Similarity=0.333 Sum_probs=133.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+|+.||+ .|+++|.+|.+|+||||+|+..++.++++.|++++.++ +.+| .+|.||||+|+..|+.+++++|+++|+
T Consensus 18 ~~v~~Ll~-~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga 94 (169)
T 4gpm_A 18 DRVKDLIE-NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKD-SDGRTPLHHAAENGHKEVVKLLISKGA 94 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhc-cCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 67777776 78999999999999999999999999999999999998 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDA 157 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~ 157 (352)
++ +.+|.+|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|++.|+.+++ ++|.++|++++.
T Consensus 95 dv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~g~~~iv-~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 95 DV-NAKDSDGRTPLHHAAENGHKEVVKLLIS----KGADVNTSDSDGRTPLDLAREHGNEEVV-KLLEKQGGWLEH 164 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHTC------
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHHHH-HHHHHCCCCcCC
Confidence 98 8899999999999999999999999999 7899999999999999999999999988 566779999874
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=8e-32 Score=237.14 Aligned_cols=184 Identities=22% Similarity=0.203 Sum_probs=154.9
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|+.......+..|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|++.++
T Consensus 37 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 37 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQD-NMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp ---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 46777777544434556999999999999999999999999999988 8888 899999999999999999999999998
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
...+..|..|+||||+|+..|+.+++++|++ .+.++|.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~ 189 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLIN----SHADVNAVDDLGKSALHWAAAVNNVDAAV-VLLKNGANKDMQNNR 189 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH----TTCCTTCBCTTSCBHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTT
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCC
Confidence 4448899999999999999999999999999 78899999999999999999999999884 555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCcc
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSNG 195 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~~ 195 (352)
|+||||+|+..++. +++++|.+.|+.+....
T Consensus 190 g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 190 EETPLFLAAREGSY---ETAKVLLDHFANRDITD 220 (253)
T ss_dssp SCCHHHHHHHHTCH---HHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHCCCH---HHHHHHHHcCCCccccc
Confidence 99999999999765 89999999988765543
No 11
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.98 E-value=3.5e-31 Score=228.78 Aligned_cols=184 Identities=18% Similarity=0.243 Sum_probs=163.8
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcC--CCccccccCCCCCcHHHHHHhcCcHHHHHHHHhh
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEID--QSASNIANKDRKMTALHLAAGRGHARTVETILSL 79 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 79 (352)
++++.|++..+...+.+|..|+||||+|+..|+.+++++|++++ .+.....+ ..|.||||+|+..|+.++++.|+++
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~ 94 (228)
T 2dzn_A 16 FKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD-DSGWTPFHIACSVGNLEVVKSLYDR 94 (228)
T ss_dssp HHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCC-TTSCCHHHHHHHHCCHHHHHHHHSS
T ss_pred HHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 67889998877777779999999999999999999999999998 55522266 7999999999999999999999999
Q ss_pred C--CCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcC-cccc
Q 045346 80 S--PDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQ-ANYD 156 (352)
Q Consensus 80 ~--~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g-~~~~ 156 (352)
+ +++ +..|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..|+.++++.|+ +.| ++++
T Consensus 95 g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~ 168 (228)
T 2dzn_A 95 PLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIE----NGASVRIKDKFNQIPLHRAASVGSLKLIELLC-GLGKSAVN 168 (228)
T ss_dssp SSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-TTTCCCSC
T ss_pred CCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-hcCccccc
Confidence 8 776 7889999999999999999999999999 78899999999999999999999999995555 567 9999
Q ss_pred ccccCCcchHHHHhhcCCCcHHHHHHHHH-HcCCCCCCcc
Q 045346 157 AVNKRNVSVRHIFSYGYPKLKEEIQKLSK-DFGRGQYSNG 195 (352)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~-~~g~~~~~~~ 195 (352)
.+|.+|+||+|+|+..++. +++++|. +.|.++....
T Consensus 169 ~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 169 WQDKQGWTPLFHALAEGHG---DAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCH---HHHHHHHHHHCCCSCCBC
T ss_pred CcCCCCCCHHHHHHHcCCH---HHHHHHHHhcCCCCCccC
Confidence 9999999999999999765 8999998 7787765533
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=9.7e-32 Score=236.62 Aligned_cols=176 Identities=23% Similarity=0.225 Sum_probs=160.5
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+|..|+||||+|+..|+.+++++|++++....+.++ ..|.||||+|+..|+.++++.|++.++
T Consensus 71 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (253)
T 1yyh_A 71 DAAKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHA 148 (253)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHTCSSHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 56676666 7899999999999999999999999999999999885548888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|.+|+||||+|+..|+.+++++|++ .|.++|.+|.+|+||||+|++.|+.+++ ++|.++|++++.+|..
T Consensus 149 ~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 149 DV-NAVDDLGKSALHWAAAVNNVDAAVVLLK----NGANKDMQNNREETPLFLAAREGSYETA-KVLLDHFANRDITDHM 222 (253)
T ss_dssp CT-TCBCTTSCBHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCCTTCCCTT
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHCCCHHHH-HHHHHcCCCccccccC
Confidence 98 8899999999999999999999999999 7889999999999999999999999998 5666799999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
|+||+|+|+..++. ++++++....
T Consensus 223 g~tpl~~A~~~g~~---~i~~~l~~~~ 246 (253)
T 1yyh_A 223 DRLPRDIAQERMHH---DIVRLLDLEH 246 (253)
T ss_dssp CCCHHHHHHHTTCH---HHHHHHHC--
T ss_pred CCCHHHHHHHcCCH---HHHHHHHHHh
Confidence 99999999999776 8888877643
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=1.6e-31 Score=231.43 Aligned_cols=176 Identities=22% Similarity=0.242 Sum_probs=161.0
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 54 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 130 (231)
T 3aji_A 54 EIVEFLLQ-LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVN-QNGCTPLHYAASKNRHEIAVMLLEGGA 130 (231)
T ss_dssp HHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-hCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56677665 68889999999999999999999999999999999988 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|..|.||||+|+..|+.+++++|++ .+.++|.+|.+|+||||+|+..++.++++ +|.++|++++.+|.+
T Consensus 131 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~ 204 (231)
T 3aji_A 131 NP-DAKDHYDATAMHRAAAKGNLKMVHILLF----YKASTNIQDTEGNTPLHLACDEERVEEAK-FLVTQGASIYIENKE 204 (231)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCSCCCCTT
T ss_pred CC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh----cCCCccccCCCCCCHHHHHHHCCCHHHHH-HHHHCCCCCCCCCCC
Confidence 98 8889999999999999999999999999 78899999999999999999999999984 555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGR 189 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~ 189 (352)
|+||+|+|... ...++.++|.+.|+
T Consensus 205 g~t~l~~A~~~---~~~~i~~lL~~~~a 229 (231)
T 3aji_A 205 EKTPLQVAKGG---LGLILKRLAEGEEA 229 (231)
T ss_dssp SCCHHHHSCHH---HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHhh---HHHHHHHHHccccc
Confidence 99999999877 45588888887654
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=6.2e-31 Score=229.01 Aligned_cols=181 Identities=21% Similarity=0.169 Sum_probs=164.0
Q ss_pred HHHHHHHH---hccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHh
Q 045346 2 AALRKLVE---EKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILS 78 (352)
Q Consensus 2 e~v~~lL~---~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 78 (352)
|+++.|++ ..+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.++++.|++
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~ 100 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALD-RHGQTAAHLACEHRSPTCLRALLD 100 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccC-CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 56777776 578899999999999999999999999999999999988 7888 799999999999999999999999
Q ss_pred hCC----CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCC-CCCCcHHHHHHhcCChHHHHHHHhhcCc
Q 045346 79 LSP----DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGD-AMENTPLHVLAAVRPKEFHAVMIKKTQA 153 (352)
Q Consensus 79 ~~~----~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~g~ 153 (352)
.++ ++ +..|..|+||||+|+..|+.+++++|++ .+.+++.+| ..|+||||+|+..|+.++++ +|.+.|+
T Consensus 101 ~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~ 174 (241)
T 1k1a_A 101 SAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLE----RGADIDAVDIKSGRSPLIHAVENNSLSMVQ-LLLQHGA 174 (241)
T ss_dssp HSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHH-HHHHTTC
T ss_pred cCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHH----cCCCcccccccCCCcHHHHHHHcCCHHHHH-HHHHcCC
Confidence 987 55 7789999999999999999999999999 778899998 88999999999999999985 5556899
Q ss_pred cccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 154 NYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
+++.+|.+|+||+|+|+..++. +++++|.+.|.++..
T Consensus 175 ~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 175 NVNAQMYSGSSALHSASGRGLL---PLVRTLVRSGADSSL 211 (241)
T ss_dssp CTTCBCTTSCBHHHHHHHHTCH---HHHHHHHHTTCCTTC
T ss_pred CCCCcCCCCCCHHHHHHHcCCH---HHHHHHHhcCCCCCC
Confidence 9999999999999999999765 899999998776543
No 15
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=233.00 Aligned_cols=179 Identities=20% Similarity=0.178 Sum_probs=161.7
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ +|.+++.+|.+|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.++++.|+++++
T Consensus 17 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 17 LSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVT-ADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp HHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 56777776 68889999999999999999999999999999999988 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ + .+.+|.||||+|+..|+.+++++|++ .+.++|.+|.+|+||||+|+..|+.++++ +|.+.|++++. |.+
T Consensus 94 ~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~-~~~ 165 (261)
T 2xai_A 94 SV-Q-PESDLASPIHEAARRGHVECVNSLIA----YGGNIDHKISHLGTPLYLACENQQRACVK-KLLESGADVNQ-GKG 165 (261)
T ss_dssp CS-S-CSCTTCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCBTTTBCHHHHHHHTTCHHHHH-HHHHHTCCTTC-CBT
T ss_pred CC-C-CCCCCCCHHHHHHHcCcHHHHHHHHH----cCCCCCcCCCCCCCHHHHHHHhCCHHHHH-HHHHcCCCCCC-CCC
Confidence 87 3 35679999999999999999999999 78899999999999999999999999985 55568999995 899
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
|.||||+|+..++. +++++|.+.|+++...
T Consensus 166 g~t~Lh~A~~~~~~---~~v~~Ll~~gad~~~~ 195 (261)
T 2xai_A 166 QDSPLHAVARTASE---ELACLLMDFGADTQAK 195 (261)
T ss_dssp TBCHHHHHHHHTCH---HHHHHHHHTTCCTTCC
T ss_pred CCChHHHHHHcCCH---HHHHHHHHcCCCCCCc
Confidence 99999999999665 8999999988776543
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1e-30 Score=227.29 Aligned_cols=182 Identities=24% Similarity=0.186 Sum_probs=162.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ +|.+++..|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|++.++
T Consensus 25 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 25 DICHMLVQ-AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKD-AEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCC-TTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHH-cCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 56666665 68889999999999999999999999999999999887 7788 799999999999999999999999985
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
...+..|..|+||||+|+..++.+++++|++ .+.+++.+|.+|+||||+|+..|+.+++ ++|.+.|++++.+|..
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~~~~~~~~ 176 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLS----KGSDINIRDNEENICLHWAAFSGCVDIA-EILLAAKCDLHAVNIH 176 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHCCHHHH-HHHHTTTCCTTCCCTT
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCccCCCCCCHHHHHHHCCCHHHH-HHHHHcCCCCCCcCCC
Confidence 4448889999999999999999999999999 7788999999999999999999998888 4555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
|+||+|+|+..++. +++++|.+.|.++...
T Consensus 177 g~t~L~~A~~~~~~---~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 177 GDSPLHIAARENRY---DCVVLFLSRDSDVTLK 206 (237)
T ss_dssp CCCHHHHHHHTTCH---HHHHHHHTTTCCTTCC
T ss_pred CCCHHHHHHHhCCH---hHHHHHHHcCCCCCcc
Confidence 99999999999655 8999999988776543
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.3e-31 Score=230.77 Aligned_cols=180 Identities=22% Similarity=0.242 Sum_probs=165.3
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .+.+++.+|..|+||||+|+..|+.+++++|+++++...+.++ ..|.||||+|+..|+.++++.|+++++
T Consensus 39 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 116 (223)
T 2f8y_A 39 DAAKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHA 116 (223)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCcHHHHHHHhCcHHHHHHHHHcCC
Confidence 56777776 6888999999999999999999999999999999885558888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +..|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|++.|+.+++ ++|.++|++++.+|..
T Consensus 117 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~~~~~~~~ 190 (223)
T 2f8y_A 117 DV-NAVDDLGKSALHWAAAVNNVDAAVVLLK----NGANKDMQNNREETPLFLAAREGSYETA-KVLLDHFANRDITDHM 190 (223)
T ss_dssp CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHTCHHHH-HHHHHTTCCTTCCCTT
T ss_pred CC-cCcCCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCcCHHHHHHHcCCHHHH-HHHHHcCCCCcccccc
Confidence 98 8889999999999999999999999999 7889999999999999999999999998 4566689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQY 192 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~ 192 (352)
|+||+|+|+..++. +++++|.+.|..+.
T Consensus 191 g~t~l~~A~~~~~~---~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 191 DRLPRDIAQERMHH---DIVRLLDEYNLVRS 218 (223)
T ss_dssp CCCHHHHHHHTTCH---HHHHHHHHTTCSSC
T ss_pred CCCHHHHHHHhcch---HHHHHHHHcCCCcc
Confidence 99999999999765 89999999887654
No 18
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=6e-31 Score=241.40 Aligned_cols=187 Identities=23% Similarity=0.232 Sum_probs=149.9
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
+.+++++...+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 38 ~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~g~ 115 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKD-KGGLVPLHNACSYGHYEVTELLLKHGA 115 (351)
T ss_dssp HHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence 56778888778888888888999999999999999999999888887 7777 788899999999999999999998888
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCch---------------------------------------------
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPL--------------------------------------------- 116 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~--------------------------------------------- 116 (352)
++ +..|..|+||||+|+.+|+.+++++|++....
T Consensus 116 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (351)
T 3utm_A 116 CV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKV 194 (351)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHH
Confidence 87 77888888999999888888888888874210
Q ss_pred -----------------------------------------hhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccc
Q 045346 117 -----------------------------------------ARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANY 155 (352)
Q Consensus 117 -----------------------------------------~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~ 155 (352)
.+.++|.+|.+|+||||+|++.|+.++++ +|.+.|+++
T Consensus 195 ~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~ 273 (351)
T 3utm_A 195 KKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VLHKHGAKM 273 (351)
T ss_dssp HHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH-HHHHTTCCT
T ss_pred HHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHH-HHHHCCCCC
Confidence 23456777788888888888888877774 445678888
Q ss_pred cccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCcc
Q 045346 156 DAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSNG 195 (352)
Q Consensus 156 ~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~~ 195 (352)
+.+|..|+||||+|+..++. +++++|.+.|+++....
T Consensus 274 n~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 274 NALDSLGQTALHRAALAGHL---QTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp TCCCTTSCCHHHHHHHHTCH---HHHHHHHHTTCCTTCCC
T ss_pred CCcCCCCCCHHHHHHHcCcH---HHHHHHHHcCCCCCCcC
Confidence 88888888888888887655 78888888877765433
No 19
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.6e-31 Score=231.18 Aligned_cols=172 Identities=17% Similarity=0.180 Sum_probs=157.8
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCc-----ccc
Q 045346 12 KKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDC-----YEL 86 (352)
Q Consensus 12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-----~~~ 86 (352)
+.+++.+|..|+||||+|+..|+.+++++|+++|.++ +.++ ..|.||||+|+..|+.+++++|++.+++. .+.
T Consensus 35 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 112 (236)
T 1ikn_D 35 LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA 112 (236)
T ss_dssp CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCC-TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC
T ss_pred HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhc
Confidence 3478999999999999999999999999999999988 8888 89999999999999999999999998652 467
Q ss_pred ccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCC-CCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcch
Q 045346 87 VDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDA-MENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSV 165 (352)
Q Consensus 87 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tp 165 (352)
.|..|.||||+|+.+|+.+++++|++ .|.+++.+|. +|+||||+|+..|+.++++ +|.++|++++.+|..|+||
T Consensus 113 ~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tp 187 (236)
T 1ikn_D 113 TNYNGHTCLHLASIHGYLGIVELLVS----LGADVNAQEPCNGRTALHLAVDLQNPDLVS-LLLKCGADVNRVTYQGYSP 187 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHH----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHH-HHHTTTCCSCCCCTTCCCG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCcccCCCCCH
Confidence 78899999999999999999999999 7889999998 9999999999999999985 5556899999999999999
Q ss_pred HHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 166 RHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 166 l~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
+|+|+..++. +++++|.+.|+.+..
T Consensus 188 l~~A~~~~~~---~~~~~Ll~~ga~~~~ 212 (236)
T 1ikn_D 188 YQLTWGRPST---RIQQQLGQLTLENLQ 212 (236)
T ss_dssp GGGCTTSSCH---HHHHHHHTTSCGGGS
T ss_pred HHHHHccCch---HHHHHHHHcchhhhh
Confidence 9999998665 999999999987764
No 20
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.9e-31 Score=232.93 Aligned_cols=177 Identities=20% Similarity=0.165 Sum_probs=152.8
Q ss_pred HHhccccccc----cCCCCChHHHHHHHc---CCHHHHHHHhhcCCCccc----------cccCCCCCcHHHHHHhcCcH
Q 045346 8 VEEKKKMIKE----TDQYGWTPIHYAAYY---GNYGMVNLLLEIDQSASN----------IANKDRKMTALHLAAGRGHA 70 (352)
Q Consensus 8 L~~~~~~~~~----~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~----------~~~~~~g~tpLh~A~~~g~~ 70 (352)
+...+.+++. +|..|+||||+|+.. |+.+++++|++++++... .+| ..|.||||+|+..|+.
T Consensus 25 l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~ 103 (256)
T 2etb_A 25 LRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEF-YQGHSALHIAIEKRSL 103 (256)
T ss_dssp HHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTT-TTTCCHHHHHHHTTCH
T ss_pred HHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccccccc-ccCCCHHHHHHHcCCH
Confidence 3357888998 899999999999999 999999999998776521 123 5799999999999999
Q ss_pred HHHHHHHhhCCCccccccCC-------------CCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHh
Q 045346 71 RTVETILSLSPDCYELVDNK-------------GWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAA 137 (352)
Q Consensus 71 ~~v~~Ll~~~~~~~~~~d~~-------------g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~ 137 (352)
+++++|+++++++ +.+|.. |+||||+|+..|+.+++++|++... .|.++|.+|.+|+||||+|+.
T Consensus 104 ~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~-~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 104 QCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH-QPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp HHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-cCCCcCccCCCCCCHHHHHHH
Confidence 9999999999998 667765 9999999999999999999998321 367899999999999999999
Q ss_pred --cCChH-------HHHHHHhhcCccc-------cccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCC
Q 045346 138 --VRPKE-------FHAVMIKKTQANY-------DAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 138 --~~~~~-------~~~~lL~~~g~~~-------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~ 191 (352)
.++.+ ++ ++|.+.|+++ +.+|.+|+||+|+|+..++. +++++|.++|..+
T Consensus 182 ~~~~~~~~~~~~~~iv-~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 182 IADNSPENSALVIHMY-DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI---EIFRHILQREFSG 247 (256)
T ss_dssp HCCSCHHHHHHHHHHH-HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHHHH
T ss_pred cccCCchhhHHHHHHH-HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCH---HHHHHHHhCCCCC
Confidence 66766 66 5666799999 99999999999999999766 8999998876543
No 21
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=5.4e-30 Score=229.58 Aligned_cols=178 Identities=20% Similarity=0.173 Sum_probs=151.8
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|++.++
T Consensus 73 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (285)
T 3d9h_A 73 LSLRNLIS-QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVT-ADWHTPLFNACVSGSWDCVNLLLQHGA 149 (285)
T ss_dssp HHHHHHHH-TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCHHHHHHHHHHCCC
Confidence 56666666 67889999999999999999999999999999998887 7788 789999999999999999999999988
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ + .+.+|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|++++. |..
T Consensus 150 ~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~-~~~ 221 (285)
T 3d9h_A 150 SV-Q-PESDLASPIHEAARRGHVECVNSLIA----YGGNIDHKISHLGTPLYLACENQQRACVK-KLLESGADVNQ-GKG 221 (285)
T ss_dssp CS-S-CSCTTSCHHHHHHHHTCHHHHHHHHH----TTCCTTCCBTTTBCHHHHHHHTTCHHHHH-HHHHTTCCTTC-CBT
T ss_pred CC-C-CCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCcHHHHH-HHHHCCCCCCC-CCC
Confidence 87 3 34558999999999999999999998 67888999999999999999999988885 44567999885 888
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
|.||||+|+..++. +++++|.+.|.++..
T Consensus 222 g~t~L~~A~~~~~~---~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 222 QDSPLHAVVRTASE---ELACLLMDFGADTQA 250 (285)
T ss_dssp TBCHHHHHHHTTCH---HHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcCCH---HHHHHHHHCCCCCCC
Confidence 99999999998655 888999888776544
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2.1e-30 Score=225.25 Aligned_cols=176 Identities=24% Similarity=0.255 Sum_probs=156.1
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+|..|.||||+|+..|+.+++++|++++....+..+ ..|.||||+|+..|+.+++++|+++++
T Consensus 58 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 135 (237)
T 3b7b_A 58 EAVKYLIK-AGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGS 135 (237)
T ss_dssp HHHHHHHT-TTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45666664 7888999999999999999999999999999999854448888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|++.++.+++ .+|.++|++++.+|++
T Consensus 136 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~gad~~~~d~~ 209 (237)
T 3b7b_A 136 DI-NIRDNEENICLHWAAFSGCVDIAEILLA----AKCDLHAVNIHGDSPLHIAARENRYDCV-VLFLSRDSDVTLKNKE 209 (237)
T ss_dssp CT-TCCCTTSCCHHHHHHHHCCHHHHHHHHT----TTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHTTTCCTTCCCTT
T ss_pred CC-CccCCCCCCHHHHHHHCCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHhCCHhHH-HHHHHcCCCCCccCCC
Confidence 98 8889999999999999999999999999 7889999999999999999999999998 5556689999999999
Q ss_pred CcchHHHHhhcCCC-cHHHHHHHHH
Q 045346 162 NVSVRHIFSYGYPK-LKEEIQKLSK 185 (352)
Q Consensus 162 g~Tpl~~a~~~~~~-~~~~i~~~l~ 185 (352)
|+||+|+|+..++. ...++++.+.
T Consensus 210 g~t~l~~A~~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 210 GETPLQCASLNSQVWSALQMSKALQ 234 (237)
T ss_dssp SCCHHHHSCTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988754 3334444443
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.8e-30 Score=213.66 Aligned_cols=157 Identities=18% Similarity=0.107 Sum_probs=145.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHh
Q 045346 21 YGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMV 100 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 100 (352)
.|.||||.|+..|+.++++.|++.+.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTD-EEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 5899999999999999999999999887 8888 89999999999999999999999999998 8889999999999999
Q ss_pred cCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHH
Q 045346 101 SFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEI 180 (352)
Q Consensus 101 ~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i 180 (352)
+|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+..++. ++
T Consensus 79 ~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~---~~ 150 (167)
T 3v31_A 79 KGYTDIVKMLLD----CGVDVNEYDWNGGTPLLYAVHGNHVKCVK-MLLESGADPTIETDSGYNSMDLAVALGYR---SV 150 (167)
T ss_dssp HTCHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCH---HH
T ss_pred cCCHHHHHHHHH----CCCCCCcCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCcH---HH
Confidence 999999999999 78899999999999999999999999995 55568999999999999999999999766 77
Q ss_pred HHHHHHcC
Q 045346 181 QKLSKDFG 188 (352)
Q Consensus 181 ~~~l~~~g 188 (352)
+++|.+.+
T Consensus 151 ~~~L~~~~ 158 (167)
T 3v31_A 151 QQVIESHL 158 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777754
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.8e-30 Score=233.58 Aligned_cols=183 Identities=20% Similarity=0.136 Sum_probs=156.3
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ .|.+++.+|..|+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 54 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 54 EEVLRLLE-RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPD-NEGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHHHHHHH-HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 56777776 67889999999999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCch-----------------------hhhhhccCCCCCCcHHHHHHhc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPL-----------------------ARSLINEGDAMENTPLHVLAAV 138 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~-----------------------~~~~~n~~d~~G~T~Lh~A~~~ 138 (352)
++ +..|.+|.||||+|+..++.++++.++..... ........|..|.||||+|+..
T Consensus 131 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 131 HV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 98 78899999999999999999998887753110 0011223567899999999999
Q ss_pred CChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCC
Q 045346 139 RPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQY 192 (352)
Q Consensus 139 ~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~ 192 (352)
|+.++++ +|.+.|++++.+|.+|.||||+|+..++. +++++|.+.|+++.
T Consensus 210 g~~~~v~-~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 210 GYTEVLK-LLIQARYDVNIKDYDGWTPLHAAAHWGKE---EACRILVENLCDME 259 (299)
T ss_dssp TCHHHHH-HHHTTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTT
T ss_pred CcHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHhcCCH---HHHHHHHHcCCCCC
Confidence 9999884 55568999999999999999999999766 89999998776543
No 25
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=1.8e-30 Score=240.40 Aligned_cols=175 Identities=19% Similarity=0.198 Sum_probs=97.1
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhh--
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSL-- 79 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-- 79 (352)
++++.|++ .|.+++.+|..|+||||+|+..|+.+++++|++++++. +. .+|.||||+|+..|+.+++++|++.
T Consensus 34 ~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~---~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 34 DEVRRLIE-TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH-SL---WHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-CC---BTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-cc---cCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 56777776 68889999999999999999999999999999988754 21 2344444444444444444444444
Q ss_pred --CCCcccc-----------------ccCCCCchhHHHHhcC--CHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhc
Q 045346 80 --SPDCYEL-----------------VDNKGWNFLHYAMVSF--RVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAV 138 (352)
Q Consensus 80 --~~~~~~~-----------------~d~~g~t~Lh~A~~~~--~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~ 138 (352)
+.++ +. .|.+|.||||+|+..| +.+++++|++ .|.++|.+|.+|+||||+|+..
T Consensus 109 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~----~ga~~~~~d~~g~t~L~~A~~~ 183 (364)
T 3ljn_A 109 ERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ----LGASPTAKDKADETPLMRAMEF 183 (364)
T ss_dssp HHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHc
Confidence 3333 22 3444444444444444 4444444444 3444444444444444444444
Q ss_pred CChHHHHHHHhhcCcc-----ccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCC
Q 045346 139 RPKEFHAVMIKKTQAN-----YDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRG 190 (352)
Q Consensus 139 ~~~~~~~~lL~~~g~~-----~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~ 190 (352)
|+.++++ +|.+.|++ ++..|..|.||||+|+..++. +++++|.+.|++
T Consensus 184 g~~~~v~-~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~---~~v~~Ll~~gad 236 (364)
T 3ljn_A 184 RNREALD-LMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE---DVAMRFVEMGID 236 (364)
T ss_dssp TCHHHHH-HHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH---HHHHHHHTTTCC
T ss_pred CCHHHHH-HHHhcccccccccccccCCCCCcHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 4444442 22223433 444444444444444444332 444444444433
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.8e-30 Score=223.05 Aligned_cols=163 Identities=23% Similarity=0.270 Sum_probs=148.2
Q ss_pred HHHHHHHHhcc--ccccc-cCCCCChHHHHHHHcCCHHHHHHHhhcC--CCccccccCCCCCcHHHHHHhcCcHHHHHHH
Q 045346 2 AALRKLVEEKK--KMIKE-TDQYGWTPIHYAAYYGNYGMVNLLLEID--QSASNIANKDRKMTALHLAAGRGHARTVETI 76 (352)
Q Consensus 2 e~v~~lL~~~~--~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 76 (352)
|+++.|++ .+ .+++. .|..|+||||+|+..|+.+++++|++++ .+. +.++ ..|.||||+|+..|+.+++++|
T Consensus 50 ~~v~~Ll~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~L 126 (228)
T 2dzn_A 50 EITSFLLS-KMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKIT-NQGVTCLHLAVGKKWFEVSQFL 126 (228)
T ss_dssp HHHHHHHH-TCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHh-ccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCC-cCCCCHHHHHHHcCCHhHHHHH
Confidence 56777776 44 55666 8899999999999999999999999998 665 7777 7999999999999999999999
Q ss_pred HhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhh-hhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccc
Q 045346 77 LSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLAR-SLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANY 155 (352)
Q Consensus 77 l~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~-~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~ 155 (352)
+++++++ +.+|..|+||||+|+..|+.+++++|++ .+ .++|.+|.+|+||||+|+..|+.++++.|+.+.|+++
T Consensus 127 l~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 127 IENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCG----LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp HHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHT----TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred HHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHh----cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 9999998 8899999999999999999999999999 66 8899999999999999999999999976665899999
Q ss_pred cccccCCcchHHHHhhc
Q 045346 156 DAVNKRNVSVRHIFSYG 172 (352)
Q Consensus 156 ~~~n~~g~Tpl~~a~~~ 172 (352)
+.+|.+|+||+|+|...
T Consensus 202 ~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 202 DLVDNKGAKAEDVALNE 218 (228)
T ss_dssp CCBCTTSCBGGGGCSST
T ss_pred CccCCCCCcHHHHHHHH
Confidence 99999999999999654
No 27
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=232.66 Aligned_cols=166 Identities=18% Similarity=0.193 Sum_probs=152.3
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHH-----hcCcHHHHHHHHhhCCCcccccc
Q 045346 14 MIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAA-----GRGHARTVETILSLSPDCYELVD 88 (352)
Q Consensus 14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~-----~~g~~~~v~~Ll~~~~~~~~~~d 88 (352)
.+|.+|.+|+||||+|+..|+.+++++|++.++...+..+ ..|.||||+|+ ..++.++++.|++.+.+. +..|
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~ 180 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKAS 180 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccC
Confidence 4899999999999999999999999999999984448888 89999999999 668999999999999877 7789
Q ss_pred CCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHH
Q 045346 89 NKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHI 168 (352)
Q Consensus 89 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~ 168 (352)
..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+.++++.|+...|++++.+|.+|+||+|+
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~----~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~ 256 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLA----CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMV 256 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh----CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHH
Confidence 999999999999999999999999 7899999999999999999999999999666655899999999999999999
Q ss_pred HhhcCCCcHHHHHHHHHHcC
Q 045346 169 FSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 169 a~~~~~~~~~~i~~~l~~~g 188 (352)
|+..++. +++++|.+.+
T Consensus 257 A~~~g~~---~iv~~Ll~~~ 273 (276)
T 4hbd_A 257 ALDAGQS---EIASMLYSRM 273 (276)
T ss_dssp HHHHTCH---HHHHHHHHHC
T ss_pred HHHcCCH---HHHHHHHhcc
Confidence 9999766 8888887754
No 28
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=228.27 Aligned_cols=174 Identities=19% Similarity=0.226 Sum_probs=154.3
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+|..|+||||+|+..|+.+++++|++++++. +. + .+|.||||+|+..|+.++++.|+++++
T Consensus 50 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (261)
T 2xai_A 50 SCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-E-SDLASPIHEAARRGHVECVNSLIAYGG 125 (261)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-S-CTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CC-C-CCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 56676666 68999999999999999999999999999999999887 43 3 479999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +..|.+|+||||+|+.+|+.+++++|++ .|.++|. |.+|+||||+|+..++.++++ +|.+.|++++.+|.+
T Consensus 126 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~-~Ll~~gad~~~~d~~ 198 (261)
T 2xai_A 126 NI-DHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQDSPLHAVARTASEELAC-LLMDFGADTQAKNAE 198 (261)
T ss_dssp CT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH----HTCCTTC-CBTTBCHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTT
T ss_pred CC-CcCCCCCCCHHHHHHHhCCHHHHHHHHH----cCCCCCC-CCCCCChHHHHHHcCCHHHHH-HHHHcCCCCCCcCCC
Confidence 98 8899999999999999999999999999 7788885 899999999999999999984 555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~ 191 (352)
|+||+|+|+..+ ++.+.+.+.+..+
T Consensus 199 g~tpl~~A~~~~-----~~~~~ll~~~~~~ 223 (261)
T 2xai_A 199 GKRPVELVPPES-----PLAQLFLEREGPP 223 (261)
T ss_dssp SCCGGGGSCTTC-----THHHHHHHC-CCC
T ss_pred CCChhhhccccc-----cHHHHHHhccCCc
Confidence 999999999654 4677777765544
No 29
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=3.1e-30 Score=212.92 Aligned_cols=161 Identities=24% Similarity=0.234 Sum_probs=145.8
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhH
Q 045346 17 ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLH 96 (352)
Q Consensus 17 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (352)
.....+.+|||.|++.|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +..|..|+||||
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 85 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAED-ASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLR 85 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHH
Confidence 44567889999999999999999999999988 8888 89999999999999999999999999998 888999999999
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCc
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKL 176 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~ 176 (352)
+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.+++ ++|.++|++++.+|..|+||+|+|+..++.
T Consensus 86 ~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~- 159 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLK----NGADVNANDMEGHTPLHLAAMFGHLEIV-EVLLKNGADVNAQDKFGKTAFDISIDNGNE- 159 (169)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-
T ss_pred HHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHhCCH-
Confidence 9999999999999999 7889999999999999999999999998 455568999999999999999999999765
Q ss_pred HHHHHHHHHHcC
Q 045346 177 KEEIQKLSKDFG 188 (352)
Q Consensus 177 ~~~i~~~l~~~g 188 (352)
+++++|.+.|
T Consensus 160 --~~~~~L~~~G 169 (169)
T 2y1l_E 160 --DLAEILQKLN 169 (169)
T ss_dssp --HHHHHHHTC-
T ss_pred --HHHHHHHHcC
Confidence 8888887754
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.6e-30 Score=226.43 Aligned_cols=175 Identities=19% Similarity=0.133 Sum_probs=153.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCC----CccccccCCCCCcHHHHHHhcCcHHHHHHHH
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQ----SASNIANKDRKMTALHLAAGRGHARTVETIL 77 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 77 (352)
|+++.|++ .|.+++.+|..|+||||+|+..|+.++++.|++++. +. +..+ ..|.||||+|+..|+.+++++|+
T Consensus 60 ~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll 136 (241)
T 1k1a_A 60 SVVRLLVT-AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARN-YDGLTALHVAVNTECQETVQLLL 136 (241)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccC-cCCCcHHHHHHHcCCHHHHHHHH
Confidence 56666665 788999999999999999999999999999999887 44 6777 79999999999999999999999
Q ss_pred hhCCCcccccc-CCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcccc
Q 045346 78 SLSPDCYELVD-NKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYD 156 (352)
Q Consensus 78 ~~~~~~~~~~d-~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~ 156 (352)
+.++++ +..+ ..|+||||+|+.+|+.+++++|++ .|.++|.+|.+|+||||+|+..|+.++++ +|.++|++++
T Consensus 137 ~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~ 210 (241)
T 1k1a_A 137 ERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQ----HGANVNAQMYSGSSALHSASGRGLLPLVR-TLVRSGADSS 210 (241)
T ss_dssp HTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHHTCHHHHH-HHHHTTCCTT
T ss_pred HcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHH-HHHhcCCCCC
Confidence 999998 5566 889999999999999999999999 78899999999999999999999999985 5556999999
Q ss_pred ccccCCcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 157 AVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
.+|.+|+||+|+|+..+ ..++++.+.+.+
T Consensus 211 ~~~~~g~tpl~~A~~~~---~~~i~~~l~~~~ 239 (241)
T 1k1a_A 211 LKNCHNDTPLMVARSRR---VIDILRGKATRP 239 (241)
T ss_dssp CCCTTSCCTTTTCSSHH---HHHHHTC-----
T ss_pred CcCCCCCCHHHHHHhcC---cHHHHhhhccCC
Confidence 99999999999999874 447777666543
No 31
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=4.6e-30 Score=235.21 Aligned_cols=187 Identities=19% Similarity=0.175 Sum_probs=152.9
Q ss_pred HHHHHHHHhccccccccCC-CCChHHHHHHHcCCHHHHHHHhhcCCCc--------------------------------
Q 045346 2 AALRKLVEEKKKMIKETDQ-YGWTPIHYAAYYGNYGMVNLLLEIDQSA-------------------------------- 48 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-------------------------------- 48 (352)
|+|+.||+ +|+++|.+|. .|+||||+|++.|+.+++++|+++|+++
T Consensus 39 ~~V~~LL~-~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (337)
T 4g8k_A 39 DLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGAD 117 (337)
T ss_dssp HHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred HHHHHHHH-CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccch
Confidence 57788776 7899998876 5999999999999999999999988764
Q ss_pred cccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCcc---------ccccCCCCchhHHHHhcCCHHHHHHHHhcCc----
Q 045346 49 SNIANKDRKMTALHLAAGRGHARTVETILSLSPDCY---------ELVDNKGWNFLHYAMVSFRVEQLTNLLENNP---- 115 (352)
Q Consensus 49 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---------~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~---- 115 (352)
.+.+| ..|.||||+|+..|+.++++.|+++++++. ...+..|.||||+|+++|+.+++++|++...
T Consensus 118 ~~~~d-~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 118 VNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp TTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhc-cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 13455 689999999999999999999999988762 1235678999999999999999999985310
Q ss_pred ------------------------------hhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcch
Q 045346 116 ------------------------------LARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSV 165 (352)
Q Consensus 116 ------------------------------~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tp 165 (352)
..|+++|.+|.+|+||||+|+..|+.+.+..|+...|++++.+|.+|+||
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~Tp 276 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 276 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBH
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCH
Confidence 02456778888888899998888888888777776788888888899999
Q ss_pred HHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 166 RHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 166 l~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
||+|+..++. +++++|.+.|+++..
T Consensus 277 L~~A~~~g~~---~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 277 LLLAVELKLK---KIAELLCKRGASTDC 301 (337)
T ss_dssp HHHHHHTTCH---HHHHHHHTTSCSSTT
T ss_pred HHHHHHcCCH---HHHHHHHHCCCCCCC
Confidence 9999888665 888888888877643
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=231.59 Aligned_cols=181 Identities=18% Similarity=0.138 Sum_probs=136.2
Q ss_pred HHHHHHHHhccc-------cccccCCCCChHHHHHHHcCCH-HHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHH
Q 045346 2 AALRKLVEEKKK-------MIKETDQYGWTPIHYAAYYGNY-GMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTV 73 (352)
Q Consensus 2 e~v~~lL~~~~~-------~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v 73 (352)
|+++.||+.... .++..|..|.||||+|+..++. .+++.|++.|.++ +.+| .+|+||||+|+..|+.+++
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d-~~G~TpLh~A~~~g~~~~v 102 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTS-QDGSSPLHVAALHGRADLI 102 (269)
T ss_dssp HHHHHHHTCC----------------------------------------CCCCT-TCCC-TTSCCHHHHHHHTTCTTHH
T ss_pred HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcC-CCCCCHHHHHHHcCcHHHH
Confidence 577888764322 3577888999999999988875 5889999999998 8899 8999999999999999999
Q ss_pred HHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCc
Q 045346 74 ETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQA 153 (352)
Q Consensus 74 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~ 153 (352)
++|++.++++ +..+.+|.||+|+|+..++.++++.|++ .|.++|.+|.+|+||||+|+..|+.++++ +|.+.|+
T Consensus 103 ~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~----~g~~~n~~d~~g~TpL~~A~~~g~~~~v~-~Ll~~ga 176 (269)
T 4b93_B 103 PLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLD----SNAKPNKKDLSGNTPLIYACSGGHHELVA-LLLQHGA 176 (269)
T ss_dssp HHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCSCCCCTTCCCHHHHHHHTTCGGGHH-HHHHTTC
T ss_pred HHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHCCCHHHHH-HHHHCCC
Confidence 9999999998 8889999999999999999999999999 78899999999999999999999999995 5556899
Q ss_pred cccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 154 NYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
++|.+|..|.||||+|+..++. +++++|.+.|+++..
T Consensus 177 dvn~~~~~g~t~Lh~A~~~g~~---~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 177 SINASNNKGNTALHEAVIEKHV---FVVELLLLHGASVQV 213 (269)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCH---HHHHHHHHTTCCSCC
T ss_pred CCCccccCCCcHHHHHHHcCCH---HHHHHHHHCCCCCCC
Confidence 9999999999999999999766 899999998876654
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-29 Score=226.10 Aligned_cols=180 Identities=17% Similarity=0.091 Sum_probs=135.8
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+|.+|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 53 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 129 (285)
T 1wdy_A 53 DIVELLLR-HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECD-FYGFTAFMEAAVYGKVKALKFLYKRGA 129 (285)
T ss_dssp HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccC-cccCCHHHHHHHhCCHHHHHHHHHhCC
Confidence 45666665 67788888888888888888888888888888888877 7777 788888888888888888888888888
Q ss_pred Cccccc----------cCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCC----hHHHHHH
Q 045346 82 DCYELV----------DNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRP----KEFHAVM 147 (352)
Q Consensus 82 ~~~~~~----------d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~----~~~~~~l 147 (352)
++ +.. +..|.||||+|+..|+.+++++|++. .+.+++.+|..|+||||+|+..++ .+++ ++
T Consensus 130 ~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~-~~ 204 (285)
T 1wdy_A 130 NV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE---MGADVNACDNMGRNALIHALLSSDDSDVEAIT-HL 204 (285)
T ss_dssp CT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT---SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHH-HH
T ss_pred Cc-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh---cCCCCCccCCCCCCHHHHHHHccccchHHHHH-HH
Confidence 77 443 67788888888888888888888873 256677777777777777777776 4444 45
Q ss_pred HhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHH-cCCCCC
Q 045346 148 IKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKD-FGRGQY 192 (352)
Q Consensus 148 L~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~-~g~~~~ 192 (352)
|.+.|++++.+|.+|+||||+|+..++. +++++|.+ .|..+.
T Consensus 205 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 205 LLDHGADVNVRGERGKTPLILAVEKKHL---GLVQRLLEQEHIEIN 247 (285)
T ss_dssp HHHTTCCSSCCCTTSCCHHHHHHHTTCH---HHHHHHHHSSSCCTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCH---HHHHHHHhccCCCcc
Confidence 5557777777777777777777777544 66776666 554443
No 34
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.6e-30 Score=213.57 Aligned_cols=161 Identities=23% Similarity=0.197 Sum_probs=143.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHH
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHY 97 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (352)
.|.+|.||||.|++.|+.++++.|++.+....+..+ ..|.||||+|+..|+.+++++|+++++++ +.+|.+|+||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHH
Confidence 467889999999999999999999997665546777 78999999999999999999999999998 8899999999999
Q ss_pred HHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcH
Q 045346 98 AMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLK 177 (352)
Q Consensus 98 A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~ 177 (352)
|+..|+.+++++|++ .+.++|.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|.. ++.
T Consensus 82 A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~-- 153 (165)
T 3twr_A 82 ACSYGHYEVAELLVK----HGAVVNVADLWKFTPLHEAAAKGKYEICK-LLLQHGADPTKKNRDGNTPLDLVKD-GDT-- 153 (165)
T ss_dssp HHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCTGGGSCT-TCH--
T ss_pred HHHcCcHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCChhHhHhc-CCh--
Confidence 999999999999999 78899999999999999999999999985 5556899999999999999999876 443
Q ss_pred HHHHHHHHHcCC
Q 045346 178 EEIQKLSKDFGR 189 (352)
Q Consensus 178 ~~i~~~l~~~g~ 189 (352)
+++++|.+.|+
T Consensus 154 -~i~~~L~~~gA 164 (165)
T 3twr_A 154 -DIQDLLRGDAA 164 (165)
T ss_dssp -HHHHHHHTC--
T ss_pred -HHHHHHhhccc
Confidence 89999988764
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.7e-30 Score=212.25 Aligned_cols=161 Identities=17% Similarity=0.092 Sum_probs=146.2
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhc
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVS 101 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (352)
+.||||.|+..|+.++++.|++.+....+.++ ..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 57899999999999999999999988668888 89999999999999999999999999998 88899999999999999
Q ss_pred CCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHH
Q 045346 102 FRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQ 181 (352)
Q Consensus 102 ~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (352)
|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+..++. +++
T Consensus 80 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~---~~~ 151 (172)
T 3v30_A 80 GYTDIVGLLLE----RDVDINIYDWNGGTPLLYAVRGNHVKCVE-ALLARGADLTTEADSGYTPMDLAVALGYR---KVQ 151 (172)
T ss_dssp TCHHHHHHHHT----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCH---HHH
T ss_pred CCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCccccCCCCCCHHHHHHHhCcH---HHH
Confidence 99999999999 78899999999999999999999999985 55568999999999999999999999765 888
Q ss_pred HHHHHcCCCCC
Q 045346 182 KLSKDFGRGQY 192 (352)
Q Consensus 182 ~~l~~~g~~~~ 192 (352)
++|.+.|....
T Consensus 152 ~~L~~~~~~~~ 162 (172)
T 3v30_A 152 QVIENHILKLF 162 (172)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHHh
Confidence 88888765443
No 36
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.1e-30 Score=211.01 Aligned_cols=159 Identities=22% Similarity=0.213 Sum_probs=144.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHH
Q 045346 20 QYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAM 99 (352)
Q Consensus 20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (352)
+...||||.|+..|+.++++.|++++.++ +.++ ..|.||||+|+. |+.+++++|+++++++ +.+|..|+||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV-NAQN-GFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCC-TTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccC-ccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 35679999999999999999999999888 8888 899999999999 9999999999999998 888999999999999
Q ss_pred hcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc-ccccccCCcchHHHHhhcCCCcHH
Q 045346 100 VSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN-YDAVNKRNVSVRHIFSYGYPKLKE 178 (352)
Q Consensus 100 ~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~-~~~~n~~g~Tpl~~a~~~~~~~~~ 178 (352)
.+|+.+++++|++ .+.++|.+|.+|+||||+|++.|+.++++ +|.+.|++ ++.+|.+|+||+|+|+..++.
T Consensus 79 ~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~--- 150 (162)
T 1ihb_A 79 RAGFLDTLQTLLE----FQADVNIEDNEGNLPLHLAAKEGHLRVVE-FLVKHTASNVGHRNHKGDTACDLARLYGRN--- 150 (162)
T ss_dssp HHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHHSCCCTTCCCTTSCCHHHHHHHTTCH---
T ss_pred HcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHH-HHHHccCCCCCCcCCCCCcHHHHHHHcCCH---
Confidence 9999999999999 78899999999999999999999999995 45557887 699999999999999999765
Q ss_pred HHHHHHHHcCCC
Q 045346 179 EIQKLSKDFGRG 190 (352)
Q Consensus 179 ~i~~~l~~~g~~ 190 (352)
+++++|.+.|++
T Consensus 151 ~~~~~Ll~~GAd 162 (162)
T 1ihb_A 151 EVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHhCCC
Confidence 899999998864
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=4.4e-30 Score=228.74 Aligned_cols=174 Identities=22% Similarity=0.233 Sum_probs=154.6
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCc--cccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCC
Q 045346 15 IKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSA--SNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGW 92 (352)
Q Consensus 15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 92 (352)
++.+|.+|+||||+|++.|+.+++++|++++.+. .+.++ ..|.||||+|+..|+.+++++|+++|+++ +.+|..|+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~ 79 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN-DLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGH 79 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCC
Confidence 5788999999999999999999999999988773 37788 79999999999999999999999999998 88899999
Q ss_pred chhHHHHhcCCHHHHHHHHhcCch-------------------------------------------hhhhhccCCCCCC
Q 045346 93 NFLHYAMVSFRVEQLTNLLENNPL-------------------------------------------ARSLINEGDAMEN 129 (352)
Q Consensus 93 t~Lh~A~~~~~~~~v~~Ll~~~~~-------------------------------------------~~~~~n~~d~~G~ 129 (352)
||||+|+..|+.+++++|++.... .+.+++.+|.+|+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999985321 2345889999999
Q ss_pred cHHHHHHhcCChHHHHHHHhhcCccccccccC-CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 130 TPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR-NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 130 T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~-g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
||||+|+..|+.++++ +|.+.|++++.++.. |+||||+|+..++. +++++|.+.|..+...
T Consensus 160 t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~---~~v~~Ll~~gad~~~~ 221 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVR-LLRDAGADLNKPEPTCGRTPLHLAVEAQAA---SVLELLLKAGADPTAR 221 (282)
T ss_dssp CHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCcCHHHHHHHcCCH---HHHHHHHHcCCCCccc
Confidence 9999999999999985 555699999999865 99999999999765 8999999998877553
No 38
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.5e-30 Score=231.46 Aligned_cols=185 Identities=21% Similarity=0.183 Sum_probs=151.8
Q ss_pred HHHHHHHH---hcccccc----ccCCCCChHHHHHHHc---CCHHHHHHHhhcCCCcc------cc----ccCCCCCcHH
Q 045346 2 AALRKLVE---EKKKMIK----ETDQYGWTPIHYAAYY---GNYGMVNLLLEIDQSAS------NI----ANKDRKMTAL 61 (352)
Q Consensus 2 e~v~~lL~---~~~~~~~----~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~------~~----~~~~~g~tpL 61 (352)
|+++.|++ ..+.+++ ..|..|+||||+|+.. |+.+++++|++++++.. +. ++ ..|.|||
T Consensus 27 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d-~~g~tpL 105 (273)
T 2pnn_A 27 QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSY-YKGQTAL 105 (273)
T ss_dssp STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTT-TTTCCHH
T ss_pred HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccccc-CCCCCHH
Confidence 34555665 3555555 4588999999999987 99999999999876431 21 44 6899999
Q ss_pred HHHHhcCcHHHHHHHHhhCCCccccccC--------------CCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCC
Q 045346 62 HLAAGRGHARTVETILSLSPDCYELVDN--------------KGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAM 127 (352)
Q Consensus 62 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~--------------~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~ 127 (352)
|+|+..|+.+++++|+++++++ +.++. .|+||||+|+..|+.+++++|++... .|.++|.+|.+
T Consensus 106 ~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~gad~~~~d~~ 183 (273)
T 2pnn_A 106 HIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW-QPADISARDSV 183 (273)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-CCCCceeeCCC
Confidence 9999999999999999999998 66676 79999999999999999999998321 25789999999
Q ss_pred CCcHHHHHHhcCC---------hHHHHHHHhhcCcccc-------ccccCCcchHHHHhhcCCCcHHHHHHHHHHcCC-C
Q 045346 128 ENTPLHVLAAVRP---------KEFHAVMIKKTQANYD-------AVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGR-G 190 (352)
Q Consensus 128 G~T~Lh~A~~~~~---------~~~~~~lL~~~g~~~~-------~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~-~ 190 (352)
|+||||+|+..++ .+++ ++|.+.|++++ .+|.+|+||||+|+..++. +++++|.+.|+ +
T Consensus 184 g~tpLh~A~~~~~~~~~~~~~~~~~v-~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~---~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 184 GNTVLHALVEVADNTVDNTKFVTSMY-NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI---GVLAYILQREIHE 259 (273)
T ss_dssp SCCHHHHHHHHCCSCHHHHHHHHHHH-HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHTC-
T ss_pred CCcHHHHHHHccCcchhHHHHHHHHH-HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH---HHHHHHHHCCCCC
Confidence 9999999999887 4566 56667899996 5999999999999999766 99999999988 5
Q ss_pred CCC
Q 045346 191 QYS 193 (352)
Q Consensus 191 ~~~ 193 (352)
|..
T Consensus 260 p~~ 262 (273)
T 2pnn_A 260 PEC 262 (273)
T ss_dssp ---
T ss_pred chh
Confidence 544
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-30 Score=237.88 Aligned_cols=166 Identities=17% Similarity=0.138 Sum_probs=133.8
Q ss_pred HHHHHHhccccccc-cCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCc---HHHHHHHHhh
Q 045346 4 LRKLVEEKKKMIKE-TDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGH---ARTVETILSL 79 (352)
Q Consensus 4 v~~lL~~~~~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~---~~~v~~Ll~~ 79 (352)
+.+++...|.++|. +|.+|+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+ .++++.|++.
T Consensus 112 ~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d-~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 112 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGD-NMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCC-TTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred HHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 44555668899999 8999999999999999999999999999998 8889 899999999999999 7888888888
Q ss_pred CCCccccccCCCCchhHHHHh----cCCHHHHHHHHhcCch----------------hhh--------------------
Q 045346 80 SPDCYELVDNKGWNFLHYAMV----SFRVEQLTNLLENNPL----------------ARS-------------------- 119 (352)
Q Consensus 80 ~~~~~~~~d~~g~t~Lh~A~~----~~~~~~v~~Ll~~~~~----------------~~~-------------------- 119 (352)
+....+.+|.+|+||||+|+. .|+.++++.|++.... .+.
T Consensus 190 ~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~ 269 (327)
T 1sw6_A 190 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 269 (327)
T ss_dssp HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHH
T ss_pred hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHH
Confidence 743348899999999999999 8999999999874210 022
Q ss_pred -----hhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhc
Q 045346 120 -----LINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYG 172 (352)
Q Consensus 120 -----~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~ 172 (352)
++|.+|.+|+||||+|++.|+.++++ +|.++|++++.+|++|+||||+|+..
T Consensus 270 ~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~-~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 270 WIIANMLNAQDSNGDTCLNIAARLGNISIVD-ALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHTTTCCCTTSCCHHHHHHHHCCHHHHH-HHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHHHhCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 46777777777777777777777774 44456777777777777777777654
No 40
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.1e-29 Score=211.61 Aligned_cols=165 Identities=19% Similarity=0.159 Sum_probs=148.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHH
Q 045346 20 QYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAM 99 (352)
Q Consensus 20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (352)
.++.+|||.|+..|+.++++.|++.+....+.++ ..|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-DHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 5688999999999999999999998666558888 89999999999999999999999999998 888999999999999
Q ss_pred hcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHH
Q 045346 100 VSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEE 179 (352)
Q Consensus 100 ~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~ 179 (352)
..|+.+++++|++ .+.++|.+|.+|+||||+|+..++.++++ +|.++|++++.+|.+|+||+|+|... ...+
T Consensus 81 ~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tpl~~A~~~---~~~~ 152 (179)
T 3f6q_A 81 SHGHRDIVQKLLQ----YKADINAVNEHGNVPLHYACFWGQDQVAE-DLVANGALVSICNKYGEMPVDKAKAP---LREL 152 (179)
T ss_dssp HTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCSSBCCTTSCCGGGGSCHH---HHHH
T ss_pred HcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHHH-HHHHCCCCcchhccCCCCcHHHHHHH---HHHH
Confidence 9999999999999 78899999999999999999999999884 55568999999999999999999887 5569
Q ss_pred HHHHHHHcCCCCCCc
Q 045346 180 IQKLSKDFGRGQYSN 194 (352)
Q Consensus 180 i~~~l~~~g~~~~~~ 194 (352)
++++|.+.|..+...
T Consensus 153 ~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 153 LRERAEKMGQNLNRI 167 (179)
T ss_dssp HHHHHHHTTCCCSCB
T ss_pred HHHHHHHhhcCcccC
Confidence 999999999887653
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.3e-30 Score=230.03 Aligned_cols=176 Identities=20% Similarity=0.142 Sum_probs=149.2
Q ss_pred hccccccccC----CCCChHHHHHH---HcCCHHHHHHHhhcCCCc----------cccccCCCCCcHHHHHHhcCcHHH
Q 045346 10 EKKKMIKETD----QYGWTPIHYAA---YYGNYGMVNLLLEIDQSA----------SNIANKDRKMTALHLAAGRGHART 72 (352)
Q Consensus 10 ~~~~~~~~~d----~~g~tpLh~A~---~~g~~~~v~~Ll~~~~~~----------~~~~~~~~g~tpLh~A~~~g~~~~ 72 (352)
..+.+++..+ ..|+||||+|+ +.|+.+++++|++.+++. .+..| ..|.||||+|+..|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~ 108 (260)
T 3jxi_A 30 THKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVY-YRGQTALHIAIERRCKHY 108 (260)
T ss_dssp HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSS-EESBCHHHHHHHTTCHHH
T ss_pred hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccc-cCCCCHHHHHHHcCCHHH
Confidence 4677787666 77999999999 779999999999987542 12333 489999999999999999
Q ss_pred HHHHHhhCCCcccccc--------------CCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhc
Q 045346 73 VETILSLSPDCYELVD--------------NKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAV 138 (352)
Q Consensus 73 v~~Ll~~~~~~~~~~d--------------~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~ 138 (352)
+++|+++|+++ +..| ..|+||||+|+..|+.+++++|++... .|.++|.+|.+|+||||+|+..
T Consensus 109 v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 109 VELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH-KQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS-CCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-cCCCCcccCCCCCcHHHHHHHh
Confidence 99999999998 6666 689999999999999999999998321 2578999999999999999987
Q ss_pred CC---------hHHHHHHHhhcCccc-------cccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCC
Q 045346 139 RP---------KEFHAVMIKKTQANY-------DAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQY 192 (352)
Q Consensus 139 ~~---------~~~~~~lL~~~g~~~-------~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~ 192 (352)
++ .+++ ++|.+.|+++ +.+|.+|+||||+|+..++. +++++|.++|..+.
T Consensus 187 ~~~~~~~~~~~~~~v-~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 187 ADNTRENTKFVTKMY-DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI---GIFQHIIRREIADA 252 (260)
T ss_dssp CCSSHHHHHHHHHHH-HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHHHHH
T ss_pred ccCchhHHHHHHHHH-HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH---HHHHHHHHhCCCcc
Confidence 76 4555 5666799999 78999999999999999766 89999998775543
No 42
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-29 Score=205.92 Aligned_cols=151 Identities=20% Similarity=0.134 Sum_probs=138.7
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhc
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVS 101 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (352)
+.||||.|++.|+.+++++|++++.+. + .+ ..|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 468999999999999999999998876 3 46 78999999999999999999999999998 88899999999999999
Q ss_pred CCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHH
Q 045346 102 FRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQ 181 (352)
Q Consensus 102 ~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (352)
|+.+++++|++ .+.++|.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+..++. +++
T Consensus 78 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~---~i~ 149 (153)
T 1awc_B 78 GHANIVEVLLK----HGADVNAKDMLKMTALHWATEHNHQEVVE-LLIKYGADVHTQSKFCKTAFDISIDNGNE---DLA 149 (153)
T ss_dssp TCHHHHHHHHT----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHH
T ss_pred ChHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCccccCCCCCCHHHHHHHcCCH---HHH
Confidence 99999999999 78899999999999999999999999985 55568999999999999999999999766 666
Q ss_pred HHH
Q 045346 182 KLS 184 (352)
Q Consensus 182 ~~l 184 (352)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 655
No 43
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4.6e-30 Score=230.06 Aligned_cols=170 Identities=18% Similarity=0.108 Sum_probs=128.1
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCC
Q 045346 3 ALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPD 82 (352)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~ 82 (352)
.++++|.++ +++.+|.+|+||||+|+..|+.+++++|++++.++ +.+ +|.||||+|+..|+.+++++|+++|++
T Consensus 14 ~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 87 (285)
T 3kea_A 14 QLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL---ENEFPLHQAATLEDTKIVKILLFSGLD 87 (285)
T ss_dssp HHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC---TTCCHHHHHTTSSSCHHHHHHHHTTCC
T ss_pred HHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC---CCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 456666654 47888888888888888888888888888887766 433 478888888888888888888888888
Q ss_pred ccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCC-CcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 83 CYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAME-NTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G-~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
+ +.+|..|+||||+|+..|+.+++++|++ .|.+++.+|..| +||||+|+..|+.++++ +|.+.|++.... +.
T Consensus 88 ~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~-~~ 160 (285)
T 3kea_A 88 D-SQFDDKGNTALYYAVDSGNMQTVKLFVK----KNWRLMFYGKTGWKTSFYHAVMLNDVSIVS-YFLSEIPSTFDL-AI 160 (285)
T ss_dssp T-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----HCGGGGGCSSSGGGSHHHHHHHTTCHHHHH-HHHTTSCTTCCC-ST
T ss_pred C-CCcCCCCCcHHHHHHHcCCHHHHHHHHh----cCCCCCccCCCCCCCHHHHHHHcCCHHHHH-HHHhCCCccccc-cC
Confidence 7 6778888888888888888888888888 677788888888 68888888888777774 444456655222 26
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
|.||||+|+..++. +++++|.+.|
T Consensus 161 g~t~L~~A~~~g~~---~~v~~Ll~~g 184 (285)
T 3kea_A 161 LLSCIHITIKNGHV---DMMILLLDYM 184 (285)
T ss_dssp HHHHHHHHHHTTCH---HHHHHHHHHH
T ss_pred CccHHHHHHHcChH---HHHHHHHHcC
Confidence 77777777777554 6666666644
No 44
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=7.9e-29 Score=220.49 Aligned_cols=184 Identities=21% Similarity=0.206 Sum_probs=165.3
Q ss_pred HHHHHHHHhcccccccc-CCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhC
Q 045346 2 AALRKLVEEKKKMIKET-DQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLS 80 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 80 (352)
|+++.|++ .+.+++.. +..|+||||+|++.|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|++++
T Consensus 19 ~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 19 DLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRK-KNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp HHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHH-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 56777776 66778877 888999999999999999999999999988 7888 79999999999999999999999999
Q ss_pred CCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccC----------CCCCCcHHHHHHhcCChHHHHHHHhh
Q 045346 81 PDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEG----------DAMENTPLHVLAAVRPKEFHAVMIKK 150 (352)
Q Consensus 81 ~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~----------d~~G~T~Lh~A~~~~~~~~~~~lL~~ 150 (352)
+++ +..|..|+||||+|+.+|+.+++++|++ .+.+++.+ |..|.||||+|+..|+.+.++.++..
T Consensus 96 ~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 96 ADV-NECDFYGFTAFMEAAVYGKVKALKFLYK----RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp CCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHH----TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCC-CccCcccCCHHHHHHHhCCHHHHHHHHH----hCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 998 8889999999999999999999999999 56667666 88899999999999999999777766
Q ss_pred cCccccccccCCcchHHHHhhcCCC-cHHHHHHHHHHcCCCCCC
Q 045346 151 TQANYDAVNKRNVSVRHIFSYGYPK-LKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 151 ~g~~~~~~n~~g~Tpl~~a~~~~~~-~~~~i~~~l~~~g~~~~~ 193 (352)
.|++++..|..|+||+|+|+..++. ...+++++|.+.|..+..
T Consensus 171 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~ 214 (285)
T 1wdy_A 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV 214 (285)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC
T ss_pred cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCC
Confidence 6999999999999999999998764 346899999998877654
No 45
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.4e-29 Score=209.43 Aligned_cols=156 Identities=21% Similarity=0.299 Sum_probs=140.4
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
+.+++++...+..++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (172)
T 3v30_A 16 DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILA-KERESALSLASTGGYTDIVGLLLERDV 93 (172)
T ss_dssp HHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhc-ccCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 67889998877779999999999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++.+++ ++|.++|++....|..
T Consensus 94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~~~-~~L~~~~~~~~~~~~~ 167 (172)
T 3v30_A 94 DI-NIYDWNGGTPLLYAVRGNHVKCVEALLA----RGADLTTEADSGYTPMDLAVALGYRKVQ-QVIENHILKLFQSNLV 167 (172)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHHHHHHSCC---
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHhCcHHHH-HHHHHHHHHHhcccCC
Confidence 98 8899999999999999999999999999 7889999999999999999999999988 5666799999999999
Q ss_pred Ccch
Q 045346 162 NVSV 165 (352)
Q Consensus 162 g~Tp 165 (352)
|.||
T Consensus 168 ~~~p 171 (172)
T 3v30_A 168 PADP 171 (172)
T ss_dssp ----
T ss_pred CCCC
Confidence 9987
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=3.3e-29 Score=217.10 Aligned_cols=165 Identities=19% Similarity=0.195 Sum_probs=145.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhc-CCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCcc----ccccCCCCchh
Q 045346 21 YGWTPIHYAAYYGNYGMVNLLLEI-DQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCY----ELVDNKGWNFL 95 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~----~~~d~~g~t~L 95 (352)
.|+||||+|++.|+.++++.|++. +.++ +.+| ..|.||||+|+..|+.+++++|++.++++. +..|.+|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRG-AMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCC-CCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 589999999999999999999998 7776 8888 899999999999999999999999998763 44677999999
Q ss_pred HHHHhcCCHHHHHHHHhcCchhhhhhccCCC-------------CCCcHHHHHHhcCChHHHHHHHhhcCccccccccCC
Q 045346 96 HYAMVSFRVEQLTNLLENNPLARSLINEGDA-------------MENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRN 162 (352)
Q Consensus 96 h~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~-------------~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g 162 (352)
|+|+.+|+.+++++|++ .+.+++.++. +|+||||+|+..|+.++++ +|.++|++++.+|.+|
T Consensus 80 ~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g 154 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLA----RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVR-LLIEHGADIRAQDSLG 154 (232)
T ss_dssp HHHHHTTCHHHHHHHHH----TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHH-HHHHTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHh----CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCC
Confidence 99999999999999999 6677777765 7999999999999999995 5556899999999999
Q ss_pred cchHHHHhhcCCCcH-HHHHHHHHHcCCCCC
Q 045346 163 VSVRHIFSYGYPKLK-EEIQKLSKDFGRGQY 192 (352)
Q Consensus 163 ~Tpl~~a~~~~~~~~-~~i~~~l~~~g~~~~ 192 (352)
+||||+|+..++.+. .+++++|.+.|..+.
T Consensus 155 ~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 155 NTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 999999999987632 355699999888664
No 47
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=3.5e-29 Score=224.31 Aligned_cols=170 Identities=19% Similarity=0.236 Sum_probs=152.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.. ..|.||||+|+..|+.+++++|++.++
T Consensus 106 ~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 181 (285)
T 3d9h_A 106 SCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QPE--SDLASPIHEAARRGHVECVNSLIAYGG 181 (285)
T ss_dssp HHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SCS--CTTSCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CCC--CCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 56666665 78999999999999999999999999999999999887 443 469999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|.+|+||||+|+.+|+.+++++|++ .+.++|. |..|+||||+|+..++.++++ +|.+.|++++.+|.+
T Consensus 182 ~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~-~~~g~t~L~~A~~~~~~~~v~-~Ll~~gad~~~~d~~ 254 (285)
T 3d9h_A 182 NI-DHKISHLGTPLYLACENQQRACVKKLLE----SGADVNQ-GKGQDSPLHAVVRTASEELAC-LLMDFGADTQAKNAE 254 (285)
T ss_dssp CT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH----TTCCTTC-CBTTBCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTT
T ss_pred CC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH----CCCCCCC-CCCCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCcCCC
Confidence 98 8899999999999999999999999999 6778884 899999999999999999984 555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHc
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDF 187 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~ 187 (352)
|+||+|+|+.. .+++++|.+.
T Consensus 255 g~t~l~~A~~~-----~~~~~~Ll~~ 275 (285)
T 3d9h_A 255 GKRPVELVPPE-----SPLAQLFLER 275 (285)
T ss_dssp SCCGGGGSCTT-----SHHHHHHHHH
T ss_pred CCCHHHHhcCc-----cHHHHHHHHh
Confidence 99999999843 2678888776
No 48
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-29 Score=233.81 Aligned_cols=178 Identities=17% Similarity=0.122 Sum_probs=151.2
Q ss_pred HHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhC---CCcc
Q 045346 8 VEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLS---PDCY 84 (352)
Q Consensus 8 L~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~ 84 (352)
+.+.|.++|.+|..|+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++|++.+ .++
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~- 228 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDI- 228 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-
Confidence 34588899999999999999999999999999999999888 7888 78999999999999999999999877 566
Q ss_pred ccccCCCCchhHHHHhcC---CHHHHHHHHhcCchhhhhhcc--------CCCCCCcHHHHHHhcCChHHHHHHHhhcCc
Q 045346 85 ELVDNKGWNFLHYAMVSF---RVEQLTNLLENNPLARSLINE--------GDAMENTPLHVLAAVRPKEFHAVMIKKTQA 153 (352)
Q Consensus 85 ~~~d~~g~t~Lh~A~~~~---~~~~v~~Ll~~~~~~~~~~n~--------~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~ 153 (352)
+..|.+|+||||+|+..+ +.+++++|++ .+.+++. +|..|+||||+|+..|+.++++.|+...|+
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~----~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 304 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVE----KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS 304 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH----HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHH----CCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC
Confidence 778889999999999887 7889999998 5566654 677899999999999998888766665569
Q ss_pred cccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCcc
Q 045346 154 NYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSNG 195 (352)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~~ 195 (352)
+++.+|.+|+||||+|+..++. +++++|.+.|+.+....
T Consensus 305 ~~n~~d~~g~TpL~~A~~~g~~---~iv~~Ll~~gad~~~~d 343 (373)
T 2fo1_E 305 NKDKQDEDGKTPIMLAAQEGRI---EVVMYLIQQGASVEAVD 343 (373)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCH---HHHHHHHHTTCCSSCCC
T ss_pred CccCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCccCCC
Confidence 9999999999999999988665 88888888887765443
No 49
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=5.5e-29 Score=216.07 Aligned_cols=183 Identities=19% Similarity=0.194 Sum_probs=162.3
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .+.+++.+|..|.||||+|+..|+.+++++|++++.+.....+ ..|.||||+|+..|+.+++++|++.++
T Consensus 23 ~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~g~ 100 (240)
T 3eu9_A 23 ERCRELVE-AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGG-DLNSTPLHWATRQGHLSMVVQLMKYGA 100 (240)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT-TTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcC-CcCCChhHHHHHcCCHHHHHHHHHcCC
Confidence 56777776 7788999999999999999999999999999999998855555 679999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcccccccc-
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNK- 160 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~- 160 (352)
++ +..|..|.||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++...+..+|.+.|++++..+.
T Consensus 101 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~----~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~ 175 (240)
T 3eu9_A 101 DP-SLIDGEGCSCIHLAAQFGHTSIVAYLIA----KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY 175 (240)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTT
T ss_pred CC-cccCCCCCCHHHHHHHcCHHHHHHHHHh----cCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhcc
Confidence 98 7889999999999999999999999999 67889999999999999999777633334777789999999997
Q ss_pred CCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 161 RNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 161 ~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
.|.||||+|+..++. +++++|.+.|..+...
T Consensus 176 ~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~ 206 (240)
T 3eu9_A 176 HKNTALHWAVLAGNT---TVISLLLEAGANVDAQ 206 (240)
T ss_dssp TCCCHHHHHHHHTCH---HHHHHHHHHTCCTTCB
T ss_pred CCCcHHHHHHHcCCH---HHHHHHHHcCCCCCCc
Confidence 999999999999765 8999999988776543
No 50
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-29 Score=238.37 Aligned_cols=179 Identities=25% Similarity=0.272 Sum_probs=105.8
Q ss_pred HHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCC
Q 045346 3 ALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPD 82 (352)
Q Consensus 3 ~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~ 82 (352)
+++.|+. ++.+++..+.+|+||||+|+..|+.++++.|++.+.+. +.++ ..|.||||+|+..|+.+++++|++++++
T Consensus 194 ~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 270 (437)
T 1n11_A 194 IVKLLLP-RGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAES-VQGVTPLHLAAQEGHAEMVALLLSKQAN 270 (437)
T ss_dssp HHHHHGG-GTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHCCCHHHHHHHHhcCCC
Confidence 3443333 45555666666666666666666666666666666555 5555 5566666666666666666666666665
Q ss_pred ccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCC
Q 045346 83 CYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRN 162 (352)
Q Consensus 83 ~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g 162 (352)
+ +..|..|+||||+|+..|+.+++++|++ .+.++|.+|..|+||||+|+..|+.++++ +|.++|++++.+|..|
T Consensus 271 ~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~-~Ll~~gad~n~~~~~g 344 (437)
T 1n11_A 271 G-NLGNKSGLTPLHLVAQEGHVPVADVLIK----HGVMVDATTRMGYTPLHVASHYGNIKLVK-FLLQHQADVNAKTKLG 344 (437)
T ss_dssp T-TCCCTTCCCHHHHHHHHTCHHHHHHHHH----HTCCTTCCCSSCCCHHHHHHHSSCSHHHH-HHHHTTCCTTCCCTTS
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHh----CCccCCCCCCCCCCHHHHHHHcCcHHHHH-HHHhcCCCCCCCCCCC
Confidence 5 5556666666666666666666666665 45556666666666666666666655553 3334566666666666
Q ss_pred cchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 163 VSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 163 ~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
+||||+|+..++. +++++|.+.|+.+..
T Consensus 345 ~t~L~~A~~~g~~---~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 345 YSPLHQAAQQGHT---DIVTLLLKNGASPNE 372 (437)
T ss_dssp CCHHHHHHHTTCH---HHHHHHHHTTCCSCC
T ss_pred CCHHHHHHHCChH---HHHHHHHHCcCCCCC
Confidence 6666666665443 566666665555443
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.9e-29 Score=236.33 Aligned_cols=180 Identities=22% Similarity=0.201 Sum_probs=156.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ ++.+++..|..|.||||+|+..|+.+++++|++++.++ +..+ ..|.||||+|+..|+.++++.|++.++
T Consensus 160 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 236 (437)
T 1n11_A 160 RVAELLLE-RDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPA-WNGYTPLHIAAKQNQVEVARSLLQYGG 236 (437)
T ss_dssp HHHHHHHH-TTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45555555 78889999999999999999999999999999998887 7777 789999999999999999999999998
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +..+..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|++.|+.+++ ++|.++|++++.+|..
T Consensus 237 ~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~~~~~~~~ 310 (437)
T 1n11_A 237 SA-NAESVQGVTPLHLAAQEGHAEMVALLLS----KQANGNLGNKSGLTPLHLVAQEGHVPVA-DVLIKHGVMVDATTRM 310 (437)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCTTCCCHHHHHHHHTCHHHH-HHHHHHTCCTTCCCSS
T ss_pred CC-CCCCCCCCCHHHHHHHCCCHHHHHHHHh----cCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHhCCccCCCCCCC
Confidence 87 7788899999999999999999999998 6778889999999999999999998888 4555689999999999
Q ss_pred CcchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 162 NVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 162 g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
|+||||+|+..++. +++++|.+.|..+..
T Consensus 311 g~t~L~~A~~~g~~---~~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 311 GYTPLHVASHYGNI---KLVKFLLQHQADVNA 339 (437)
T ss_dssp CCCHHHHHHHSSCS---HHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHcCcH---HHHHHHHhcCCCCCC
Confidence 99999999999777 888888887766543
No 52
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-29 Score=232.90 Aligned_cols=179 Identities=17% Similarity=0.163 Sum_probs=158.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcC---CCccccccCCCCCcHHHHHHhcC---cHHHHHH
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEID---QSASNIANKDRKMTALHLAAGRG---HARTVET 75 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~~g~tpLh~A~~~g---~~~~v~~ 75 (352)
|+++.|++ .|++++.+|..|+||||+|+..|+.+++++|++++ .++ +..+ ..|.||||+|+..| +.+++++
T Consensus 180 ~iv~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d-~~g~t~L~~A~~~~~~~~~~~v~~ 256 (373)
T 2fo1_E 180 RLVAYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELD-RNGMTALMIVAHNEGRDQVASAKL 256 (373)
T ss_dssp HHHHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCC-TTSCCHHHHHHHSCSTTHHHHHHH
T ss_pred HHHHHHHH-CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcC-CCCCCHHHHHHHhCCcchHHHHHH
Confidence 46666665 78999999999999999999999999999999987 455 7788 89999999999998 8999999
Q ss_pred HHhhCCCccc-------cccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHH
Q 045346 76 ILSLSPDCYE-------LVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMI 148 (352)
Q Consensus 76 Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL 148 (352)
|+++++++.. ..|..|+||||+|+.+|+.+++++|++. .+.++|.+|.+|+||||+|+..|+.++++ +|
T Consensus 257 Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~d~~g~TpL~~A~~~g~~~iv~-~L 332 (373)
T 2fo1_E 257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE---KGSNKDKQDEDGKTPIMLAAQEGRIEVVM-YL 332 (373)
T ss_dssp HHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH---SCCCTTCCCTTCCCHHHHHHHHTCHHHHH-HH
T ss_pred HHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh---cCCCccCcCCCCCCHHHHHHHcCCHHHHH-HH
Confidence 9999999832 2577999999999999999999999983 23889999999999999999999999994 55
Q ss_pred hhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCC
Q 045346 149 KKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRG 190 (352)
Q Consensus 149 ~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~ 190 (352)
.++|++++.+|.+|+||+|+|+..++. +++++|.+.+..
T Consensus 333 l~~gad~~~~d~~g~t~l~~A~~~g~~---~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 333 IQQGASVEAVDATDHTARQLAQANNHH---NIVDIFDRCRPE 371 (373)
T ss_dssp HHTTCCSSCCCSSSCCHHHHHHHTTCH---HHHHHHHTTC--
T ss_pred HHcCCCccCCCCCCCCHHHHHHHcCCH---HHHHHHHhcCcc
Confidence 568999999999999999999999766 899999887653
No 53
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.5e-29 Score=225.29 Aligned_cols=178 Identities=15% Similarity=0.087 Sum_probs=158.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+| |+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 45 ~~v~~Ll~-~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga 119 (285)
T 3kea_A 45 RLVCTLLN-AGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDD-SQFD-DKGNTALYYAVDSGNMQTVKLFVKKNW 119 (285)
T ss_dssp HHHHHHHH-TTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCG
T ss_pred HHHHHHHh-CCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 56777776 688888874 899999999999999999999999998 8888 799999999999999999999999999
Q ss_pred CccccccCCC-CchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCC-CCCcHHHHHHhcCChHHHHHHHhhcCccccccc
Q 045346 82 DCYELVDNKG-WNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDA-MENTPLHVLAAVRPKEFHAVMIKKTQANYDAVN 159 (352)
Q Consensus 82 ~~~~~~d~~g-~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n 159 (352)
++ +.+|..| .||||+|+..|+.+++++|++. +.+. .|. .|+||||+|+..|+.++++ +|.++|++++.+|
T Consensus 120 ~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~----g~~~--~~~~~g~t~L~~A~~~g~~~~v~-~Ll~~gad~n~~~ 191 (285)
T 3kea_A 120 RL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSE----IPST--FDLAILLSCIHITIKNGHVDMMI-LLLDYMTSTNTNN 191 (285)
T ss_dssp GG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTT----SCTT--CCCSTHHHHHHHHHHTTCHHHHH-HHHHHHHHTCTTC
T ss_pred CC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhC----CCcc--ccccCCccHHHHHHHcChHHHHH-HHHHcCCCCCccc
Confidence 98 8889999 8999999999999999999994 4433 333 8999999999999999995 5556899999999
Q ss_pred cCCcch-HHHHhhcCCCcHHHHHHHHHHcCCCCCCcc
Q 045346 160 KRNVSV-RHIFSYGYPKLKEEIQKLSKDFGRGQYSNG 195 (352)
Q Consensus 160 ~~g~Tp-l~~a~~~~~~~~~~i~~~l~~~g~~~~~~~ 195 (352)
..|+|| ||+|+..++. +++++|.+.|+++....
T Consensus 192 ~~g~t~~L~~A~~~~~~---~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 192 SLLFIPDIKLAIDNKDI---EMLQALFKYDINIYSAN 225 (285)
T ss_dssp CCBCCTTHHHHHHHTCH---HHHHHHTTSCBCSTTTT
T ss_pred CCCCChHHHHHHHcCCH---HHHHHHHHcCCCCCCCC
Confidence 999998 9999999765 99999999998886643
No 54
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=213.01 Aligned_cols=178 Identities=21% Similarity=0.282 Sum_probs=155.7
Q ss_pred HHHHHHHHhcccccc-ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhC
Q 045346 2 AALRKLVEEKKKMIK-ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLS 80 (352)
Q Consensus 2 e~v~~lL~~~~~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 80 (352)
++++.|++ .+.+++ ..+..|+||||+|+..|+.+++++|++.+.++ +.++ ..|.||||+|+..|+.++++.|++++
T Consensus 56 ~~v~~Ll~-~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~ 132 (240)
T 3eu9_A 56 DLVKYYIS-KGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLID-GEGCSCIHLAAQFGHTSIVAYLIAKG 132 (240)
T ss_dssp HHHHHHHH-TTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHH-cCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHcCHHHHHHHHHhcC
Confidence 56777777 455555 44556999999999999999999999999988 7788 79999999999999999999999999
Q ss_pred CCccccccCCCCchhHHHHhcCC-HHHHHHHHhcCchhhhhhccCCC-CCCcHHHHHHhcCChHHHHHHHhhcCcccccc
Q 045346 81 PDCYELVDNKGWNFLHYAMVSFR-VEQLTNLLENNPLARSLINEGDA-MENTPLHVLAAVRPKEFHAVMIKKTQANYDAV 158 (352)
Q Consensus 81 ~~~~~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~ 158 (352)
+++ +..|..|.||||+|+..++ .++++.|++ .+.+++.++. .|+||||+|+..|+.++++ +|.++|++++.+
T Consensus 133 ~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~----~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~ 206 (240)
T 3eu9_A 133 QDV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLT----FNVSVNLGDKYHKNTALHWAVLAGNTTVIS-LLLEAGANVDAQ 206 (240)
T ss_dssp CCT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHH----TTCCTTCCCTTTCCCHHHHHHHHTCHHHHH-HHHHHTCCTTCB
T ss_pred CCc-cccCCCCCcHHHHHHHhCChHHHHHHHHh----cCCCcchhhccCCCcHHHHHHHcCCHHHHH-HHHHcCCCCCCc
Confidence 998 8889999999999997766 789999998 7788999997 8999999999999999985 555689999999
Q ss_pred ccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCC
Q 045346 159 NKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 159 n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~ 191 (352)
|.+|+||+|+|+..++. +++++|.+.+...
T Consensus 207 ~~~g~t~l~~A~~~~~~---~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 207 NIKGESALDLAKQRKNV---WMINHLQEARQAK 236 (240)
T ss_dssp CTTSCBHHHHHHHTTCH---HHHHHHHHHC---
T ss_pred CCCCCCHHHHHHHcCcH---HHHHHHHHhhhcc
Confidence 99999999999999766 8999998876543
No 55
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=1.8e-29 Score=219.57 Aligned_cols=172 Identities=17% Similarity=0.127 Sum_probs=145.6
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHhhcCCC---ccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCC
Q 045346 16 KETDQYGWTPIHYAAYYGNYGMVNLLLEIDQS---ASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGW 92 (352)
Q Consensus 16 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 92 (352)
+.+|.+|+||||+|+..|+.++++.|++.+.. ..+.++ ..|.||||+|+..|+.+++++|+++|+++ +.+|..|+
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 79 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGN 79 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCC-TTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence 46789999999999999999999999997653 237788 79999999999999999999999999998 88999999
Q ss_pred chhHHHHhcCCHHHHHHHHhcCch--hhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcccccccc-CCcchHHHH
Q 045346 93 NFLHYAMVSFRVEQLTNLLENNPL--ARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNK-RNVSVRHIF 169 (352)
Q Consensus 93 t~Lh~A~~~~~~~~v~~Ll~~~~~--~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~-~g~Tpl~~a 169 (352)
||||+|+..|+.+++++|++.... ....++.+|..|+||||+|+..|+.++++ +|.+.|++++.+|. .|.||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVE-LLVSLGADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCCHHHHH
Confidence 999999999999999999995431 12347889999999999999999999985 55568999999998 999999999
Q ss_pred hhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 170 SYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 170 ~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
+..++. +++++|.+.|+.+..
T Consensus 159 ~~~~~~---~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 159 VDLQNP---DLVSLLLKCGADVNR 179 (236)
T ss_dssp HHTTCH---HHHHHHHTTTCCSCC
T ss_pred HHcCCH---HHHHHHHHcCCCCCc
Confidence 999765 899999998876654
No 56
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=8.6e-29 Score=201.19 Aligned_cols=153 Identities=16% Similarity=0.130 Sum_probs=138.4
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhc
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVS 101 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 101 (352)
|.||||.|+..|+.++++.|++......+..+ ..|.||||+ +..|+.++++.|++.++++ +.+|..|+||||+|+.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 56999999999999999999998322337788 899999999 9999999999999999998 88999999999999999
Q ss_pred CCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHH
Q 045346 102 FRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQ 181 (352)
Q Consensus 102 ~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~ 181 (352)
|+.+++++|++ .|.++|.+|.+|+||||+|+..|+.++++.|+. . ++++.+|.+|+||+|+|+..++. +++
T Consensus 79 ~~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~~---~~v 149 (156)
T 1bd8_A 79 GFLDTLKVLVE----HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQRGAQ---DLV 149 (156)
T ss_dssp TCHHHHHHHHH----TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCCH---HHH
T ss_pred CcHHHHHHHHH----cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCcH---HHH
Confidence 99999999999 788999999999999999999999999965554 5 99999999999999999999766 777
Q ss_pred HHHHH
Q 045346 182 KLSKD 186 (352)
Q Consensus 182 ~~l~~ 186 (352)
++|.+
T Consensus 150 ~~Ll~ 154 (156)
T 1bd8_A 150 DILQG 154 (156)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77754
No 57
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=2.5e-28 Score=223.97 Aligned_cols=172 Identities=19% Similarity=0.237 Sum_probs=141.9
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ +|.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 72 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (351)
T 3utm_A 72 RIVQLLLQ-HGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMD-LWQFTPLHEAASKNRVEVCSLLLSHGA 148 (351)
T ss_dssp HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-cCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45566655 67778888888888888888888888888888888777 6777 678888888888888877777777655
Q ss_pred Ccc-----------------------------------------------------------------------------
Q 045346 82 DCY----------------------------------------------------------------------------- 84 (352)
Q Consensus 82 ~~~----------------------------------------------------------------------------- 84 (352)
++.
T Consensus 149 ~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~ 228 (351)
T 3utm_A 149 DPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQ 228 (351)
T ss_dssp CTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHH
T ss_pred CCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHH
Confidence 421
Q ss_pred ------------ccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcC
Q 045346 85 ------------ELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQ 152 (352)
Q Consensus 85 ------------~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (352)
+.+|.+|+||||+|+.+|+.+++++|++ .|.++|.+|..|+||||+|+..|+.+++ ++|.++|
T Consensus 229 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~n~~d~~g~t~L~~A~~~~~~~~v-~~Ll~~g 303 (351)
T 3utm_A 229 VAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK----HGAKMNALDSLGQTALHRAALAGHLQTC-RLLLSYG 303 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTT
T ss_pred HHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHHcC
Confidence 4467889999999999999999999999 7899999999999999999999999998 5566689
Q ss_pred ccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 153 ANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 153 ~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
++++.+|.+|+||+|+|. .++.+++.+.+
T Consensus 304 ad~~~~~~~g~tal~~a~-------~~~~~~l~~~~ 332 (351)
T 3utm_A 304 SDPSIISLQGFTAAQMGN-------EAVQQILSEST 332 (351)
T ss_dssp CCTTCCCTTSCCHHHHSC-------HHHHHHHHHC-
T ss_pred CCCCCcCCCCCChhhhhh-------HHHHHHHHhcc
Confidence 999999999999999983 25777777644
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.2e-28 Score=228.27 Aligned_cols=171 Identities=22% Similarity=0.133 Sum_probs=146.2
Q ss_pred ccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCC
Q 045346 11 KKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNK 90 (352)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 90 (352)
.+.+.+..|.+|+||||+|+..|+.+++++|++++.++ +.+| ..|.||||+|+..|+.+++++|++++++. .+.+
T Consensus 9 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~ 83 (364)
T 3ljn_A 9 PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQN-RFGCTALHLACKFGCVDTAKYLASVGEVH---SLWH 83 (364)
T ss_dssp -------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBT
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccC
Confidence 34567888999999999999999999999999999988 8888 89999999999999999999999999965 3468
Q ss_pred CCchhHHHHhcCCHHHHHHHHhcCchhhhhhcc-----------------CCCCCCcHHHHHHhcC--ChHHHHHHHhhc
Q 045346 91 GWNFLHYAMVSFRVEQLTNLLENNPLARSLINE-----------------GDAMENTPLHVLAAVR--PKEFHAVMIKKT 151 (352)
Q Consensus 91 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~-----------------~d~~G~T~Lh~A~~~~--~~~~~~~lL~~~ 151 (352)
|+||||+|+..|+.+++++|++.....+.+++. +|.+|+||||+|+..| +.++++ +|.+.
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~-~Ll~~ 162 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIK-ILVQL 162 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHH-HHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHH-HHHHc
Confidence 999999999999999999999953323555555 8999999999999999 888885 55567
Q ss_pred CccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCC
Q 045346 152 QANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRG 190 (352)
Q Consensus 152 g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~ 190 (352)
|++++.+|..|+||||+|+..++. +++++|.+.|..
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNR---EALDLMMDTVPS 198 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHCSC
T ss_pred CCCCcccCCCCCCHHHHHHHcCCH---HHHHHHHhcccc
Confidence 999999999999999999999766 889999886554
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=9.4e-28 Score=203.19 Aligned_cols=171 Identities=16% Similarity=0.098 Sum_probs=151.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHH
Q 045346 19 DQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYA 98 (352)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (352)
+..+.||||.|+..|+.+.++.|++.+....+..+ ..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVD-TEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 45789999999999999999999998874448888 89999999999999999999999999998 88999999999999
Q ss_pred HhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCC--c
Q 045346 99 MVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPK--L 176 (352)
Q Consensus 99 ~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~--~ 176 (352)
+..|+.+++++|++. .+.+++.+|..|+||||+|+..|+.++++.|+...+++++.+|..|+||+|+|+..++. .
T Consensus 80 ~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 80 GAQGRTEILAYMLKH---ATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHcCCHHHHHHHHhc---cCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 999999999999963 45689999999999999999999999996666543399999999999999999988763 3
Q ss_pred HHHHHHHHHHcCCCCCCc
Q 045346 177 KEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 177 ~~~i~~~l~~~g~~~~~~ 194 (352)
..+++++|.+.|..+...
T Consensus 157 ~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIK 174 (201)
T ss_dssp HHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHHCCCCCCcc
Confidence 368999999999877553
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-28 Score=221.22 Aligned_cols=163 Identities=24% Similarity=0.249 Sum_probs=144.4
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhC-
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLS- 80 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~- 80 (352)
|+++.|++ .|.+++.+|..|+||||+|+..|+.+++++|+++++++ +..+ ..|.||||+|+..|+.++++.++...
T Consensus 87 ~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~l~~A~~~~~~~~~~~ll~~~~ 163 (299)
T 1s70_B 87 DMVKFLVE-NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVN-SEGDTPLDIAEEEAMEELLQNEVNRQG 163 (299)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcC-CCCCCHHHHHHhcchHHHHHHHHhhcC
Confidence 56676666 78999999999999999999999999999999999988 8888 89999999999999999998877542
Q ss_pred CC-------------------------ccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHH
Q 045346 81 PD-------------------------CYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVL 135 (352)
Q Consensus 81 ~~-------------------------~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (352)
.+ .....+..|.||||+|+.+|+.+++++|++ .|.++|.+|.+|+||||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~d~~~~d~~g~tpL~~A 239 (299)
T 1s70_B 164 VDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ----ARYDVNIKDYDGWTPLHAA 239 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT----TTCCTTCCCTTCCCHHHHH
T ss_pred CCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH----cCCCCCCcCCCCCcHHHHH
Confidence 22 112356789999999999999999999999 7889999999999999999
Q ss_pred HhcCChHHHHHHHhhcCccccccccCCcchHHHHhhc
Q 045346 136 AAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYG 172 (352)
Q Consensus 136 ~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~ 172 (352)
+..|+.+++ .+|.+.|++++.+|..|+||+|+|.+.
T Consensus 240 ~~~~~~~~v-~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 240 AHWGKEEAC-RILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHTTCHHHH-HHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HhcCCHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 999999998 556668999999999999999999654
No 61
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.3e-28 Score=202.62 Aligned_cols=153 Identities=23% Similarity=0.347 Sum_probs=142.5
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.+++..+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 19 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (179)
T 3f6q_A 19 VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMN-RGDDTPLHLAASHGHRDIVQKLLQYKA 96 (179)
T ss_dssp HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 67889999889999999999999999999999999999999999988 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKR 161 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~ 161 (352)
++ +.+|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++.+++ ++|.+.|++++..+.+
T Consensus 97 ~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~~~~~-~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 97 DI-NAVNEHGNVPLHYACFWGQDQVAEDLVA----NGALVSICNKYGEMPVDKAKAPLRELLR-ERAEKMGQNLNRIPYK 170 (179)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCSSBCCTTSCCGGGGSCHHHHHHHH-HHHHHTTCCCSCBCCC
T ss_pred CC-CccCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCcchhccCCCCcHHHHHHHHHHHHH-HHHHHhhcCcccCCcc
Confidence 98 8899999999999999999999999999 7889999999999999999999887777 5667799999987765
Q ss_pred C
Q 045346 162 N 162 (352)
Q Consensus 162 g 162 (352)
+
T Consensus 171 ~ 171 (179)
T 3f6q_A 171 D 171 (179)
T ss_dssp C
T ss_pred c
Confidence 5
No 62
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=2.2e-28 Score=199.11 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=117.3
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCc-
Q 045346 15 IKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWN- 93 (352)
Q Consensus 15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t- 93 (352)
.+..++.|.||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+ .|+.+++++|+++++++ +.+|..|+|
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~tt 80 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPN-SYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTR 80 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCC-SSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcH
Confidence 4567889999999999999999999999999888 8888 79999999985 99999999999999998 889999999
Q ss_pred hhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHH
Q 045346 94 FLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIF 169 (352)
Q Consensus 94 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a 169 (352)
|||+|+..|+.+++++|++ .|.++|.+|.+|+||||+|+..|+.+++ ++|.++|++++.+|..|.||.+-+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~v-~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHR----AGARLDVRDAWGRLPVDLAEELGHRDVA-RYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHH----HTCCSSCCCTTCCCHHHHHHHHTCHHHH-HHHSSCC-----------------
T ss_pred HHHHHHHCCCHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHhCHHHHH-HHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999 7899999999999999999999999988 566679999999999999998744
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=3.4e-28 Score=214.08 Aligned_cols=165 Identities=13% Similarity=0.084 Sum_probs=140.1
Q ss_pred CCChHHHHHHHcCCHH----HHHHHhhcCCCcccc----ccCCCCCcHHHHHHhc---CcHHHHHHHHhhCCCccc----
Q 045346 21 YGWTPIHYAAYYGNYG----MVNLLLEIDQSASNI----ANKDRKMTALHLAAGR---GHARTVETILSLSPDCYE---- 85 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~----~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~---- 85 (352)
.|+||||+|++.|+.+ ++++|++++.++ +. +| ..|.||||+|+.. |+.+++++|++.++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d-~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEG-STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBT-TTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCC-CCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 4899999999999997 567777788888 65 77 8999999999999 999999999999876621
Q ss_pred ------cccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCC-------------CCcHHHHHHhcCChHHHHH
Q 045346 86 ------LVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAM-------------ENTPLHVLAAVRPKEFHAV 146 (352)
Q Consensus 86 ------~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~-------------G~T~Lh~A~~~~~~~~~~~ 146 (352)
..|..|+||||+|+..|+.+++++|++ .|.++|.+|.. |+||||+|+..|+.++++.
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVE----NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHH----cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 234789999999999999999999999 78889999886 9999999999999999955
Q ss_pred HHhh--cCccccccccCCcchHHHHhhcCCCcH------HHHHHHHHHcCCCC
Q 045346 147 MIKK--TQANYDAVNKRNVSVRHIFSYGYPKLK------EEIQKLSKDFGRGQ 191 (352)
Q Consensus 147 lL~~--~g~~~~~~n~~g~Tpl~~a~~~~~~~~------~~i~~~l~~~g~~~ 191 (352)
|+.. .|++++.+|.+|+||||+|+..++... .+++++|.+.|+++
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 5543 899999999999999999998433221 13888998877655
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4.5e-27 Score=193.89 Aligned_cols=142 Identities=27% Similarity=0.406 Sum_probs=130.3
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 28 ~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 104 (169)
T 2y1l_E 28 DEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVD-HAGMTPLRLAALFGHLEIVEVLLKNGA 104 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56777776 68889999999999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcC
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQ 152 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (352)
++ +.+|.+|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..|+.++++ +|.+.|
T Consensus 105 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~~~-~L~~~G 169 (169)
T 2y1l_E 105 DV-NANDMEGHTPLHLAAMFGHLEIVEVLLK----NGADVNAQDKFGKTAFDISIDNGNEDLAE-ILQKLN 169 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHTC-
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHhCCHHHHH-HHHHcC
Confidence 98 8889999999999999999999999999 78899999999999999999999999885 544443
No 65
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=6.7e-28 Score=191.62 Aligned_cols=134 Identities=17% Similarity=0.113 Sum_probs=121.6
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCC-
Q 045346 12 KKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNK- 90 (352)
Q Consensus 12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~- 90 (352)
+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+. |+.+++++|+++++++ +.+|..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~ 77 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALN-RFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPAT 77 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCC
Confidence 4578899999999999999999999999999999887 8888 799999999999 9999999999999998 788888
Q ss_pred CCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc
Q 045346 91 GWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN 154 (352)
Q Consensus 91 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~ 154 (352)
|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.++++ +|.++|+|
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~~~-~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHR----AGARLDVCDAWGRLPVDLAEEQGHRDIAR-YLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHH----TCCCCCCCSSSSSCHHHHHHHHTCHHHHH-HHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHHH-HHHHcCCC
Confidence 9999999999999999999999 77889999999999999999999988884 55557764
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.4e-27 Score=195.13 Aligned_cols=143 Identities=18% Similarity=0.264 Sum_probs=129.5
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ ++.+++.+|..|+||||+|+. |+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 19 ~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 19 EQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKD-RTGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56777775 788899999999999999999 9999999999999988 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhh-hccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSL-INEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN 154 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~-~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~ 154 (352)
++ +.+|.+|+||||+|+..|+.+++++|++ .+.+ ++.+|.+|+||||+|+..|+.+++ ++|.++|+|
T Consensus 95 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~t~l~~A~~~~~~~~~-~~Ll~~GAd 162 (162)
T 1ihb_A 95 DV-NIEDNEGNLPLHLAAKEGHLRVVEFLVK----HTASNVGHRNHKGDTACDLARLYGRNEVV-SLMQANGAG 162 (162)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----HSCCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTC--
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----ccCCCCCCcCCCCCcHHHHHHHcCCHHHH-HHHHHhCCC
Confidence 98 8899999999999999999999999999 5665 689999999999999999999998 455567875
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.5e-28 Score=212.15 Aligned_cols=161 Identities=14% Similarity=0.068 Sum_probs=113.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHH
Q 045346 19 DQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYA 98 (352)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (352)
+..|.||||.|++.|+.+.++.|+++|.++ +. + ..|.||||.|+..|+.++++.|++.++++ +.+|..|+||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-N-PLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-cc-C-chhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 457999999999999999999999999888 43 3 57899999999999999999999999988 88999999999999
Q ss_pred HhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCc-chHHHH--hhcCCC
Q 045346 99 MVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNV-SVRHIF--SYGYPK 175 (352)
Q Consensus 99 ~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~-Tpl~~a--~~~~~~ 175 (352)
+.+|+.+++++|++ .|.++|.+|.+|+||||+|+..|+.+++ ++|.++|++++.+|..|. ||+|+| +..++.
T Consensus 78 ~~~g~~~~v~~Ll~----~ga~~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQ----FGVNVNAADSDGWTPLHCAASCNNVQVC-KFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHTCHHHHHHHHH----HTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence 99999999999999 7899999999999999999999999998 555568999999998887 999999 556555
Q ss_pred cHHHHHHHHHHcCCCC
Q 045346 176 LKEEIQKLSKDFGRGQ 191 (352)
Q Consensus 176 ~~~~i~~~l~~~g~~~ 191 (352)
+++++|.+.|..+
T Consensus 153 ---~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 153 ---QCSQFLYGVQEKM 165 (239)
T ss_dssp ---CHHHHHHHHHHHT
T ss_pred ---HHHHHHHHhhhcc
Confidence 6778887766544
No 68
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=7.4e-28 Score=214.01 Aligned_cols=176 Identities=16% Similarity=0.117 Sum_probs=141.0
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHHhhc----CCCccc---cccCCCCCcHHHHHHhc---CcHHHHHHHHhhCC
Q 045346 12 KKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEI----DQSASN---IANKDRKMTALHLAAGR---GHARTVETILSLSP 81 (352)
Q Consensus 12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~----~~~~~~---~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~ 81 (352)
++..+..|..|+||||+|++.|+.++++.|++. +.+... ..+ ..|.||||+|+.. |+.+++++|++.++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~-~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDP-ETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCT-TTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccC-cCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 456778899999999999999999999998874 333311 345 7999999999987 99999999999876
Q ss_pred Ccc----------ccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCC--------------CCCcHHHHHHh
Q 045346 82 DCY----------ELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDA--------------MENTPLHVLAA 137 (352)
Q Consensus 82 ~~~----------~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~--------------~G~T~Lh~A~~ 137 (352)
+.. ...|..|+||||+|+..|+.+++++|++ .|.++|.+|. +|+||||+|+.
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 157 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE----NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHH
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH----CCCCcCccccccccccccccccccCCCCHHHHHHH
Confidence 531 1256789999999999999999999999 7888999887 79999999999
Q ss_pred cCChHHHHHHHhh--cCccccccccCCcchHHHHhhcCCCcH------HHHHHHHHHcCCCCC
Q 045346 138 VRPKEFHAVMIKK--TQANYDAVNKRNVSVRHIFSYGYPKLK------EEIQKLSKDFGRGQY 192 (352)
Q Consensus 138 ~~~~~~~~~lL~~--~g~~~~~~n~~g~Tpl~~a~~~~~~~~------~~i~~~l~~~g~~~~ 192 (352)
.|+.++++.|+.. .|++++.+|.+|+||||+|+..++... .+++++|.+.|..+.
T Consensus 158 ~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 9999999555543 899999999999999999999876421 578888888776543
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5e-27 Score=193.04 Aligned_cols=145 Identities=23% Similarity=0.302 Sum_probs=132.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.+++ .+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 17 ~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 17 LYLATRIE-QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLG-KGRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp HHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHH-cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcC-CCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 56778887 56789999999999999999999999999999999888 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANY 155 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~ 155 (352)
++ +.+|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..|+.++++ +|.+++.+.
T Consensus 94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~~~-~L~~~~~~~ 161 (167)
T 3v31_A 94 DV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE----SGADPTIETDSGYNSMDLAVALGYRSVQQ-VIESHLLKL 161 (167)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHHTCHHHHH-HHHHHHHHH
T ss_pred CC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCcHHHHH-HHHHHHHHH
Confidence 98 8889999999999999999999999999 78899999999999999999999999985 454455554
No 70
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=1.1e-26 Score=212.86 Aligned_cols=175 Identities=19% Similarity=0.190 Sum_probs=149.0
Q ss_pred HHHHHHHHhccccccc----------cCCCCChHHHHHHHcCCHHHHHHHhhc-CCCccccccCCCCCcHHHHHHhcCc-
Q 045346 2 AALRKLVEEKKKMIKE----------TDQYGWTPIHYAAYYGNYGMVNLLLEI-DQSASNIANKDRKMTALHLAAGRGH- 69 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~----------~d~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~tpLh~A~~~g~- 69 (352)
++++.++. .|++++. .+..|.||||+|++.|+.+++++|+++ +.++ +.++ ..|.||+|.++..++
T Consensus 139 ~~~~~ll~-~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d-~~g~t~l~~~~~~~~~ 215 (337)
T 4g8k_A 139 KALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACD-NMGRNALIHALLSSDD 215 (337)
T ss_dssp HHHHHHHH-TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCC-TTSCCHHHHHHHHSCT
T ss_pred HHHHHHHH-cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccC-CCCCcHHHHHHHHcCc
Confidence 34555554 6665553 455799999999999999999999975 7777 8888 899999999876543
Q ss_pred ---HHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHH
Q 045346 70 ---ARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAV 146 (352)
Q Consensus 70 ---~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~ 146 (352)
.+++++|+++|+++ +.+|.+|+||||+|++.|+.++++.|++. .+.++|.+|.+|+||||+|++.|+.+++ +
T Consensus 216 ~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~---~~~~vn~~d~~G~TpL~~A~~~g~~~iv-~ 290 (337)
T 4g8k_A 216 SDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQ---EHIEINDTDSDGKTALLLAVELKLKKIA-E 290 (337)
T ss_dssp TTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTS---TTCCTTCBCTTSCBHHHHHHHTTCHHHH-H
T ss_pred ccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHh---cCCcccCcCCCCCCHHHHHHHcCCHHHH-H
Confidence 46889999999998 88999999999999999999999999984 4678999999999999999999999999 5
Q ss_pred HHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCC
Q 045346 147 MIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQY 192 (352)
Q Consensus 147 lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~ 192 (352)
+|.++|+++|. .+|||+|+..++. +++++|.++|+.+.
T Consensus 291 ~Ll~~GAd~n~-----~~~L~~A~~~~~~---~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 291 LLCKRGASTDC-----GDLVMTARRNYDH---SLVKVLLSHGAKED 328 (337)
T ss_dssp HHHTTSCSSTT-----CCHHHHHHHTTCH---HHHHHHHHTTCCC-
T ss_pred HHHHCCCCCCC-----CCHHHHHHHcCCH---HHHHHHHHCcCCCC
Confidence 56678999875 4699999999766 89999999998874
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1e-26 Score=188.86 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=129.4
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
+.++.+++..+.+++.+|..|+||||+ +..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++|+
T Consensus 16 ~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQD-TSGTSPVHDAARTGFLDTLKVLVEHGA 92 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 678889987666899999999999999 9999999999999999988 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHh
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIK 149 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~ 149 (352)
++ +.+|.+|+||||+|+.+|+.+++++|++ . .+++.+|.+|+||||+|+..|+.++++.|+.
T Consensus 93 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 93 DV-NVPDGTGALPIHLAVQEGHTAVVSFLAA----E-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CS-CCCCTTSCCHHHHHHHHTCHHHHHHHHT----T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred CC-CCcCCCCCcHHHHHHHhChHHHHHHHHh----c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 98 8899999999999999999999999998 5 7899999999999999999999999965553
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.4e-27 Score=193.66 Aligned_cols=143 Identities=20% Similarity=0.269 Sum_probs=130.6
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|.++.|++..+.+++..|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 22 ~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 99 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKD-KGGLVPLHNACSYGHYEVAELLVKHGA 99 (165)
T ss_dssp HHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccC-CCCCCHHHHHHHcCcHHHHHHHHhCCC
Confidence 67888888888889999999999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQA 153 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~ 153 (352)
++ +.+|..|+||||+|+.+|+.+++++|++ .|.+++.+|.+|+||||+|+. ++.+++ ++|.+.|+
T Consensus 100 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~a~~-~~~~i~-~~L~~~gA 164 (165)
T 3twr_A 100 VV-NVADLWKFTPLHEAAAKGKYEICKLLLQ----HGADPTKKNRDGNTPLDLVKD-GDTDIQ-DLLRGDAA 164 (165)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCTGGGSCT-TCHHHH-HHHHTC--
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCcccCCCCCChhHhHhc-CChHHH-HHHhhccc
Confidence 98 8899999999999999999999999999 788999999999999999877 777877 55555554
No 73
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-26 Score=186.56 Aligned_cols=135 Identities=24% Similarity=0.335 Sum_probs=124.5
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++. +.+++ .|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 16 ~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 91 (153)
T 1awc_B 16 DEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DART-KVDRTPLHMAASEGHANIVEVLLKHGA 91 (153)
T ss_dssp HHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-CCCCCHHHHHHHcChHHHHHHHHHcCC
Confidence 567777774 55555 5889999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHH
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHA 145 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~ 145 (352)
++ +.+|.+|+||||+|+.+|+.+++++|++ .|.+++.+|.+|+||||+|+..|+.++++
T Consensus 92 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 150 (153)
T 1awc_B 92 DV-NAKDMLKMTALHWATEHNHQEVVELLIK----YGADVHTQSKFCKTAFDISIDNGNEDLAE 150 (153)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 98 8899999999999999999999999999 78899999999999999999999988874
No 74
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.6e-26 Score=194.49 Aligned_cols=140 Identities=21% Similarity=0.139 Sum_probs=130.2
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
++++.|++ .+.+++.+|..|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++
T Consensus 49 ~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (192)
T 2rfm_A 49 NAIDKLVE-NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKD-FSGKTPLMWSIIFGYSEMSYFLLEHGA 125 (192)
T ss_dssp GGHHHHHH-HHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHH-hccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 56777776 57889999999999999999999999999999999988 8888 799999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHh
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIK 149 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~ 149 (352)
++ +.+|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..|+.++++.|+.
T Consensus 126 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 126 NV-NDRNLEGETPLIVASKYGRSEIVKKLLE----LGADISARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp CS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH----TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 98 8899999999999999999999999999 788999999999999999999999999965554
No 75
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=207.40 Aligned_cols=160 Identities=16% Similarity=0.145 Sum_probs=134.6
Q ss_pred HHHHHHhcccccc---ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhC
Q 045346 4 LRKLVEEKKKMIK---ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLS 80 (352)
Q Consensus 4 v~~lL~~~~~~~~---~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 80 (352)
+++||+ ++..++ ..+.+|.||||+|+..|+.+++++|++.+.++ +.+| ..|.||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~-~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLR-KAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPN-EEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred Ceehhc-cCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 355665 444444 45567888999999999999999999999988 8888 89999999999999999999999999
Q ss_pred CCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCC-CCCCcHHHHH--HhcCChHHHHHHHhhcCccccc
Q 045346 81 PDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGD-AMENTPLHVL--AAVRPKEFHAVMIKKTQANYDA 157 (352)
Q Consensus 81 ~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A--~~~~~~~~~~~lL~~~g~~~~~ 157 (352)
+++ +.+|..|+||||+|+.+|+.+++++|++ .|.+++.+| .+|+||||+| +..|+.+++ ++|.+.|++++.
T Consensus 78 a~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v-~~Ll~~ga~~~~ 151 (229)
T 2vge_A 78 ANV-NSPDSHGWTPLHCAASCNDTVICMALVQ----HGAAIFATTLSDGATAFEKCDPYREGYADCA-TYLADVEQSMGL 151 (229)
T ss_dssp CCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHH-HHHHHHHHHTTT
T ss_pred CCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcccccCCCCCCHHHHHHHHhcChHHHH-HHHHHcCCCccc
Confidence 998 8899999999999999999999999999 788999987 6999999999 899988888 555668999988
Q ss_pred cccCCcchHHHHhhc
Q 045346 158 VNKRNVSVRHIFSYG 172 (352)
Q Consensus 158 ~n~~g~Tpl~~a~~~ 172 (352)
+|..|.||++.+...
T Consensus 152 ~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 152 MNSGAVYALWDYSAE 166 (229)
T ss_dssp SGGGEEEESSCBCCS
T ss_pred ccCCchHHHHHHhhc
Confidence 888888888865444
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.9e-28 Score=211.34 Aligned_cols=162 Identities=12% Similarity=0.051 Sum_probs=144.9
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
|+++.|++ .|.+++.+|..|+||||+|+..|+.+++++|+++++++ +.+| ..|.||||+|+..|+.+++++|++.++
T Consensus 35 ~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 35 EVVQQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPD-SHGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56777776 67889999999999999999999999999999999998 8888 799999999999999999999999999
Q ss_pred Cccccc-cCCCCchhHHH--HhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc--cc
Q 045346 82 DCYELV-DNKGWNFLHYA--MVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN--YD 156 (352)
Q Consensus 82 ~~~~~~-d~~g~t~Lh~A--~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~--~~ 156 (352)
++ +.. +.+|+||||+| +..|+.+++++|++ .|.+++.+|..|.||+|.++..+.. .+|.+.|++ ++
T Consensus 112 ~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~~l~~~~~~~~~----~~ll~~ga~~~~~ 182 (229)
T 2vge_A 112 AI-FATTLSDGATAFEKCDPYREGYADCATYLAD----VEQSMGLMNSGAVYALWDYSAEFGD----ELSFREGESVTVL 182 (229)
T ss_dssp CT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH----HHHHTTTSGGGEEEESSCBCCSSTT----BCCBCTTCEEEEE
T ss_pred Cc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHH----cCCCcccccCCchHHHHHHhhcccc----ccCcccccccccc
Confidence 99 555 47999999999 99999999999999 8999999999999999976655422 355667888 77
Q ss_pred ccccCCcchHHHHhhcCCC
Q 045346 157 AVNKRNVSVRHIFSYGYPK 175 (352)
Q Consensus 157 ~~n~~g~Tpl~~a~~~~~~ 175 (352)
.+|.+|+||||+|+..++.
T Consensus 183 ~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 183 RRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp ESSCTTCSSEEEEEETTEE
T ss_pred ccCCCcccHHHHHHHcCCc
Confidence 8899999999999998766
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=4.2e-27 Score=197.28 Aligned_cols=153 Identities=12% Similarity=0.011 Sum_probs=131.1
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcH----HHHHHHHhhCCCccccccCCCCchhHH
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHA----RTVETILSLSPDCYELVDNKGWNFLHY 97 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (352)
++++||.|++.|+.+.++.+++.+.+. ..+ ..|+||||+|+.+|+. +++++|+++|+++ +.+|.+|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~-~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KES-VLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHH-HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccc-cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 578999999999999999999876543 223 5799999999999975 5999999999999 8899999999999
Q ss_pred HHhcCC------HHHHHHHHhcCchhhhhhccCCCCCC-cHHHHHHhcCCh-----HHHHHHHhh-cCccccccccCCcc
Q 045346 98 AMVSFR------VEQLTNLLENNPLARSLINEGDAMEN-TPLHVLAAVRPK-----EFHAVMIKK-TQANYDAVNKRNVS 164 (352)
Q Consensus 98 A~~~~~------~~~v~~Ll~~~~~~~~~~n~~d~~G~-T~Lh~A~~~~~~-----~~~~~lL~~-~g~~~~~~n~~g~T 164 (352)
|+..++ .+++++|++ .|+++|.+|.+|+ ||||+|+..+.. +++ ++|.+ +|++++.+|++|+|
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~----~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv-~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLE----KGADITALYKPYKIVVFKNIFNYFVDENEMIPLY-KLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH----TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHH-HHHHTSTTCCTTCCCTTSCC
T ss_pred HHHcCCcchhhHHHHHHHHHH----CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHH-HHHHHhcCCCCcccCCCCCC
Confidence 999987 578999999 8999999999999 999999995542 345 55566 99999999999999
Q ss_pred hHHHHhhcCCCcHHHHHHHHHH
Q 045346 165 VRHIFSYGYPKLKEEIQKLSKD 186 (352)
Q Consensus 165 pl~~a~~~~~~~~~~i~~~l~~ 186 (352)
|||+|...++. +++++|.+
T Consensus 157 pL~~A~~~~~~---~~v~~L~~ 175 (186)
T 3t8k_A 157 ALEFVKRCQKP---IALKMMED 175 (186)
T ss_dssp HHHHHHTTTCH---HHHHHHHH
T ss_pred HHHHHHHcCCH---HHHHHHHH
Confidence 99999998766 66666554
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=8.9e-27 Score=203.19 Aligned_cols=163 Identities=15% Similarity=0.152 Sum_probs=130.4
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCC
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSP 81 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 81 (352)
+.++.+++ +|.+++. +..|.||||+|+..|+.++++.|+++++++ +.+| ..|.||||+|+..|+.+++++|+++++
T Consensus 19 ~~~~~ll~-~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga 94 (239)
T 1ycs_B 19 KTGSERIA-HGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPN-DEGITALHNAVCAGHTEIVKFLVQFGV 94 (239)
T ss_dssp --------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHhc-cCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34555554 7887875 478999999999999999999999999987 8888 899999999999999999999999999
Q ss_pred CccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCC-cHHHHH--HhcCChHHHHHHHhhcCcccccc
Q 045346 82 DCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMEN-TPLHVL--AAVRPKEFHAVMIKKTQANYDAV 158 (352)
Q Consensus 82 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~-T~Lh~A--~~~~~~~~~~~lL~~~g~~~~~~ 158 (352)
++ +.+|.+|+||||+|+.+|+.+++++|++ .|.+++.+|.+|. ||||+| +..|+.+++ ++|.+.|++++..
T Consensus 95 ~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~-~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 95 NV-NAADSDGWTPLHCAASCNNVQVCKFLVE----SGAAVFAMTYSDMQTAADKCEEMEEGYTQCS-QFLYGVQEKMGIM 168 (239)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHH-HHHHHHHHHTTTT
T ss_pred CC-CccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcceecCCCCcchHHHHHHhhhccHHHH-HHHHHhhhccccc
Confidence 98 8899999999999999999999999999 7889999998887 999999 778888988 5566689888876
Q ss_pred ---------ccCCcchHHHHhhcCC
Q 045346 159 ---------NKRNVSVRHIFSYGYP 174 (352)
Q Consensus 159 ---------n~~g~Tpl~~a~~~~~ 174 (352)
+..++++.+++...|+
T Consensus 169 ~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 169 NKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp GGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred ccceEEEEeccCCCCCCcccccCCC
Confidence 4456777777766654
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=3.1e-26 Score=209.16 Aligned_cols=160 Identities=16% Similarity=0.091 Sum_probs=135.6
Q ss_pred HHHHHHHcCCHHHHHHHhhcCCCcccc-ccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCC
Q 045346 25 PIHYAAYYGNYGMVNLLLEIDQSASNI-ANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFR 103 (352)
Q Consensus 25 pLh~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 103 (352)
.+|+|+..+..++++.|++.+.++ +. +| ..|.||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+.+|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dv-n~~~d-~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNL-NIPVD-EHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCS-CSCCS-TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCc-ccccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcc
Confidence 358888888889999999999998 77 78 89999999999999999999999999999 8899999999999999998
Q ss_pred ---HHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHh----cCChHHHHHHHhhcCc-----------------------
Q 045346 104 ---VEQLTNLLENNPLARSLINEGDAMENTPLHVLAA----VRPKEFHAVMIKKTQA----------------------- 153 (352)
Q Consensus 104 ---~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~----~~~~~~~~~lL~~~g~----------------------- 153 (352)
.+.++.|++. ...+++.+|.+|+||||+|++ .|+.++++.++. .+.
T Consensus 177 ~~~~~~~~~ll~~---~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~-~~~~~~~~~~~~~i~~~~~~~g~~~~ 252 (327)
T 1sw6_A 177 NYDSGTFEALLDY---LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLD-ILMGWIVKKQNRPIQSGTNEKESKPN 252 (327)
T ss_dssp HHHTTCHHHHHHH---HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHH-HHHHHHHHGGGCCEEEC---------
T ss_pred cccHHHHHHHHHh---hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHH-HHHHHHhcccchHHHhhhhcccCCcc
Confidence 6788888883 126799999999999999999 888888865543 321
Q ss_pred ----------------------cccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCc
Q 045346 154 ----------------------NYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSN 194 (352)
Q Consensus 154 ----------------------~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~ 194 (352)
+++.+|.+|+||||+|+..++. +++++|.+.|+++...
T Consensus 253 ~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~---~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 253 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI---SIVDALLDYGADPFIA 312 (327)
T ss_dssp -------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCH---HHHHHHHHTTCCTTCC
T ss_pred cccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCccc
Confidence 5788899999999999999765 8999999998877543
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.4e-26 Score=201.64 Aligned_cols=168 Identities=15% Similarity=0.111 Sum_probs=139.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhh----cCCCcccccc---CCCCCcHHHHHH---hcCcHHHHHHHHhhCCCc-----
Q 045346 19 DQYGWTPIHYAAYYGNYGMVNLLLE----IDQSASNIAN---KDRKMTALHLAA---GRGHARTVETILSLSPDC----- 83 (352)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~----~~~~~~~~~~---~~~g~tpLh~A~---~~g~~~~v~~Ll~~~~~~----- 83 (352)
+..|+||||.|++.|+.+.++.|++ .+.++ +..+ +..|.||||+|+ ..|+.+++++|++.+++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 5679999999999999996555554 77776 4333 157999999999 779999999999987542
Q ss_pred -----cccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCC--------------CCCCcHHHHHHhcCChHHH
Q 045346 84 -----YELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGD--------------AMENTPLHVLAAVRPKEFH 144 (352)
Q Consensus 84 -----~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d--------------~~G~T~Lh~A~~~~~~~~~ 144 (352)
....|.+|+||||+|+..|+.+++++|++ .|.++|.+| .+|+||||+|+..|+.+++
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVE----KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHh----CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 14456699999999999999999999999 788899998 6899999999999999999
Q ss_pred HHHHhh--cCccccccccCCcchHHHHhhcCCCcH------HHHHHHHHHcCCCC
Q 045346 145 AVMIKK--TQANYDAVNKRNVSVRHIFSYGYPKLK------EEIQKLSKDFGRGQ 191 (352)
Q Consensus 145 ~~lL~~--~g~~~~~~n~~g~Tpl~~a~~~~~~~~------~~i~~~l~~~g~~~ 191 (352)
+.|+.. .|++++.+|.+|+||||+|+..++... .+++++|.+.|+.+
T Consensus 157 ~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 157 HYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 544443 899999999999999999998766422 47888888877654
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=7.2e-26 Score=179.83 Aligned_cols=130 Identities=16% Similarity=0.123 Sum_probs=120.2
Q ss_pred ccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCC-C
Q 045346 50 NIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAM-E 128 (352)
Q Consensus 50 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~-G 128 (352)
+.++ ..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+. |+.+++++|++ .+.++|.+|.. |
T Consensus 6 ~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~----~g~~~~~~~~~~g 78 (136)
T 1d9s_A 6 HMLG-GSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLL----HGAEPNCADPATL 78 (136)
T ss_dssp SCCC-CCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHH----HTCCSSCCBTTTT
T ss_pred cCCC-CCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHH----CCCCCCCcCCCCC
Confidence 7777 79999999999999999999999999998 8889999999999999 99999999999 78899999999 9
Q ss_pred CcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCC
Q 045346 129 NTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRG 190 (352)
Q Consensus 129 ~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~ 190 (352)
+||||+|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+..++. +++++|.+.|++
T Consensus 79 ~t~L~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~---~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLV-VLHRAGARLDVCDAWGRLPVDLAEEQGHR---DIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHH-HHHHTCCCCCCCSSSSSCHHHHHHHHTCH---HHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHH-HHHHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 99999999999999985 55569999999999999999999999665 899999887753
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.3e-25 Score=173.70 Aligned_cols=126 Identities=34% Similarity=0.417 Sum_probs=112.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHh
Q 045346 21 YGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMV 100 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 100 (352)
+|+||||+|++.|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence 5889999999999999999999998887 7777 78999999999999999999999999888 7888999999999999
Q ss_pred cCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc
Q 045346 101 SFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN 154 (352)
Q Consensus 101 ~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~ 154 (352)
.|+.+++++|++ .+.+++.+|.+|+||||+|+..++.++++ +|.++|+|
T Consensus 78 ~~~~~~~~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~~~-~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLE----AGADVNAKDKNGRTPLHLAARNGHLEVVK-LLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHHTCC
T ss_pred cChHHHHHHHHH----cCCCCcccCCCCCCHHHHHHHcCcHHHHH-HHHHcCCC
Confidence 999999999998 67888999999999999999999988885 55557765
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.2e-25 Score=178.48 Aligned_cols=128 Identities=23% Similarity=0.260 Sum_probs=110.0
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhH
Q 045346 17 ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLH 96 (352)
Q Consensus 17 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (352)
.....|.||||+|+..|+.+++++|++++.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+|.+|+||||
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~ 85 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLH 85 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHH
Confidence 34556889999999999999999999998887 7788 78999999999999999999999999988 778899999999
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcC
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQ 152 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (352)
+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..++.++++ +|.+.|
T Consensus 86 ~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~tpl~~A~~~~~~~~~~-~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLK----HGADVNAQDKFGKTAFDISIGNGNEDLAE-ILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHC-
T ss_pred HHHHcCCHHHHHHHHH----cCCCCcCcCCCCCCHHHHHHHCCCHHHHH-HHHHcC
Confidence 9999999999999998 67888999999999999999999988885 444343
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=4.1e-26 Score=181.38 Aligned_cols=121 Identities=23% Similarity=0.211 Sum_probs=81.2
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhH
Q 045346 17 ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLH 96 (352)
Q Consensus 17 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (352)
.+|.+|+||||+|+..|+.+++++|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKD-HAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHH
Confidence 45666777777777777777777777766666 5666 56777777777777777777777766666 566666677777
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHH
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFH 144 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~ 144 (352)
+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..+..+++
T Consensus 82 ~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLS----YGASRNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHhhccHHHHH
Confidence 7777777777766666 5566666666677777766655543333
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=5.3e-25 Score=196.14 Aligned_cols=145 Identities=21% Similarity=0.238 Sum_probs=130.8
Q ss_pred HHHHHHHHhccccccccCCCCChHHHHHH-----HcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHH
Q 045346 2 AALRKLVEEKKKMIKETDQYGWTPIHYAA-----YYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETI 76 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~~d~~g~tpLh~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 76 (352)
++++.|++....+++.+|..|+||||+|+ ..++.++++.|++.+... +..+ ..|.||||+|+..|+.+++++|
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~-~~g~tpLh~A~~~g~~~~v~~L 202 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKAS-QAGQTALMLAVSHGRVDVVKAL 202 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCT-TTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccC-CCCCCHHHHHHHcCCHHHHHHH
Confidence 56777887554599999999999999999 668899999999999776 6777 7899999999999999999999
Q ss_pred HhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcC
Q 045346 77 LSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQ 152 (352)
Q Consensus 77 l~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g 152 (352)
+++|+++ +.+|.+|+||||+|+.+|+.+++++|++. .|.++|.+|.+|+||||+|+..|+.++++.|+.+.+
T Consensus 203 l~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~---~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 203 LACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAV---PSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTS---TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhc---CCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999998 88999999999999999999999999984 478899999999999999999999999977776544
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=4e-25 Score=184.69 Aligned_cols=141 Identities=21% Similarity=0.149 Sum_probs=125.1
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCcccccc-CCCCchhH
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVD-NKGWNFLH 96 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh 96 (352)
.|.+|+||||+|+..|+.++++.|++ +.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+| ..|+||||
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~ 115 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHH
Confidence 35689999999999999999999999 7777 8888 89999999999999999999999999998 5566 89999999
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCc
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKL 176 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~ 176 (352)
+|+..|+.+++++|++ .|.+++.+|.+|+||||+|++.++. ..+.+|+++|+..+
T Consensus 116 ~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~--- 170 (183)
T 3deo_A 116 MAAGYVRPEVVEALVE----LGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIG--- 170 (183)
T ss_dssp HHHHTTCHHHHHHHHH----HTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHH---
T ss_pred HHHhcCcHHHHHHHHH----cCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcC---
Confidence 9999999999999999 7899999999999999999875421 45689999999884
Q ss_pred HHHHHHHHHHc
Q 045346 177 KEEIQKLSKDF 187 (352)
Q Consensus 177 ~~~i~~~l~~~ 187 (352)
..+++++|.++
T Consensus 171 ~~~i~~~L~~~ 181 (183)
T 3deo_A 171 LEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 45788877653
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.9e-25 Score=187.10 Aligned_cols=147 Identities=10% Similarity=0.026 Sum_probs=123.2
Q ss_pred HHHHHHHhccccccccC-CCCChHHHHHHHcCCH----HHHHHHhhcCCCccccccCCCCCcHHHHHHhcCc------HH
Q 045346 3 ALRKLVEEKKKMIKETD-QYGWTPIHYAAYYGNY----GMVNLLLEIDQSASNIANKDRKMTALHLAAGRGH------AR 71 (352)
Q Consensus 3 ~v~~lL~~~~~~~~~~d-~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~------~~ 71 (352)
.++.++.. .++.+| ..|+||||+|+..|+. +++++|+++|+++ +.++ ..|+||||+|+..|+ .+
T Consensus 21 ~~~~l~~~---~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d-~~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 21 DFLELFEK---GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRT-KEGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHH---SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCC-TTCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhc---CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCC-CCCCcHHHHHHHcCCcchhhHHH
Confidence 45555553 345555 7799999999999985 5999999999999 9999 899999999999987 68
Q ss_pred HHHHHHhhCCCccccccCCCC-chhHHHHhcCC-----HHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHH
Q 045346 72 TVETILSLSPDCYELVDNKGW-NFLHYAMVSFR-----VEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHA 145 (352)
Q Consensus 72 ~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A~~~~~-----~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~ 145 (352)
++++|+++|+++ +.+|.+|+ ||||+|+..+. .+++++|++. .|+++|.+|.+|+||||+|++.++.+.+
T Consensus 96 iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~---~gad~~~~d~~G~TpL~~A~~~~~~~~v- 170 (186)
T 3t8k_A 96 LCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ---SGLQLLIKDKWGLTALEFVKRCQKPIAL- 170 (186)
T ss_dssp HHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS---TTCCTTCCCTTSCCHHHHHHTTTCHHHH-
T ss_pred HHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh---cCCCCcccCCCCCCHHHHHHHcCCHHHH-
Confidence 899999999999 88999999 99999999554 4588888873 4789999999999999999999998888
Q ss_pred HHHhhcCccccccc
Q 045346 146 VMIKKTQANYDAVN 159 (352)
Q Consensus 146 ~lL~~~g~~~~~~n 159 (352)
++|.+...+.+.++
T Consensus 171 ~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 171 KMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhccc
Confidence 55555555565554
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=5.1e-25 Score=174.99 Aligned_cols=128 Identities=23% Similarity=0.269 Sum_probs=112.6
Q ss_pred cccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCc
Q 045346 51 IANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENT 130 (352)
Q Consensus 51 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 130 (352)
.+| .+|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+|
T Consensus 5 ~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTN-HRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ----HKALVNTTGYQNDS 78 (137)
T ss_dssp CCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCGGGCC
T ss_pred CcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH----cCCcccCcCCCCCC
Confidence 456 79999999999999999999999999998 8899999999999999999999999999 78899999999999
Q ss_pred HHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 131 PLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 131 ~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
|||+|+..++.++++ +|.+.|++++.+|.+|+||+|+|... ...++++++.+.+
T Consensus 79 ~L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tpl~~A~~~---~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVK-LLLSYGASRNAVNIFGLRPVDYTDDE---SMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCGGGGCCCH---HHHHHHSCC----
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCCCCCCCCCHHHHHhhc---cHHHHHhhccccc
Confidence 999999999999985 55568999999999999999999866 4456666655544
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.8e-24 Score=171.69 Aligned_cols=125 Identities=22% Similarity=0.200 Sum_probs=115.0
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHH
Q 045346 55 DRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHV 134 (352)
Q Consensus 55 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~ 134 (352)
..|.||||+|+..|+.++++.|+++++++ +.+|..|+||||+|+.+|+.+++++|++ .+.++|.+|.+|+||||+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLK----NGADVNAVDAIGFTPLHL 86 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTCCCHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHH
Confidence 57889999999999999999999999998 8889999999999999999999999999 788999999999999999
Q ss_pred HHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcC
Q 045346 135 LAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFG 188 (352)
Q Consensus 135 A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g 188 (352)
|+..|+.++++ +|.+.|++++.+|.+|+||+|+|+..++. +++++|.+.|
T Consensus 87 A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~---~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAE-VLLKHGADVNAQDKFGKTAFDISIGNGNE---DLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHC-
T ss_pred HHHcCCHHHHH-HHHHcCCCCcCcCCCCCCHHHHHHHCCCH---HHHHHHHHcC
Confidence 99999999985 55568999999999999999999999765 8888887764
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=5e-24 Score=166.04 Aligned_cols=126 Identities=29% Similarity=0.309 Sum_probs=116.6
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHH
Q 045346 56 RKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVL 135 (352)
Q Consensus 56 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (352)
+|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|+.+++.+++++|++ .+.+++.+|..|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHH----cCCCCcccCCCCCcHHHHH
Confidence 5899999999999999999999999998 7889999999999999999999999999 6788999999999999999
Q ss_pred HhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCC
Q 045346 136 AAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRG 190 (352)
Q Consensus 136 ~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~ 190 (352)
+..++.++++ +|.+.|++++.+|.+|+||+|+|+..++. +++++|.+.|++
T Consensus 76 ~~~~~~~~~~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~Gad 126 (126)
T 1n0r_A 76 ARNGHLEVVK-LLLEAGADVNAKDKNGRTPLHLAARNGHL---EVVKLLLEAGAY 126 (126)
T ss_dssp HHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHTCC
T ss_pred HHcChHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHcCcH---HHHHHHHHcCCC
Confidence 9999999985 55568999999999999999999999665 899999988763
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.2e-24 Score=190.23 Aligned_cols=142 Identities=21% Similarity=0.141 Sum_probs=126.4
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCcccccc-CCCCchhH
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVD-NKGWNFLH 96 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh 96 (352)
.+.+|.||||+|++.|+.++++.|++ +.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+| ..|+||||
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHH
Confidence 34578999999999999999999999 7777 8888 89999999999999999999999999999 5566 88999999
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCc
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKL 176 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~ 176 (352)
+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..++ +..+.||+|+|+..++
T Consensus 117 ~A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~-- 172 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVE----LGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGL-- 172 (244)
T ss_dssp HHHHTTCHHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHH--
T ss_pred HHHHcCCHHHHHHHHH----CCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcCh--
Confidence 9999999999999999 789999999999999999986332 2578999999999854
Q ss_pred HHHHHHHHHHcC
Q 045346 177 KEEIQKLSKDFG 188 (352)
Q Consensus 177 ~~~i~~~l~~~g 188 (352)
.+++++|.+.+
T Consensus 173 -~~iv~~L~~~~ 183 (244)
T 3ui2_A 173 -EKVINVLEGQV 183 (244)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHhc
Confidence 47888888753
No 92
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=2.5e-25 Score=191.64 Aligned_cols=140 Identities=19% Similarity=0.120 Sum_probs=102.3
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhh-CCCccccccCCCCc
Q 045346 15 IKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSL-SPDCYELVDNKGWN 93 (352)
Q Consensus 15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t 93 (352)
++..|.+|.||||+|+..|+.++++.|++.+.++ +.+| ..|.||||+|+..|+.+++++|++. ++++ +.+|..|+|
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~t 142 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLD-KAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDT 142 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCC
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCc-cccC-CCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCC
Confidence 3455667888888888888888888888888777 7777 7888888888888888888888887 7776 778888888
Q ss_pred hhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCC
Q 045346 94 FLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRN 162 (352)
Q Consensus 94 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g 162 (352)
|||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+++ +.+...|++.+..|.+|
T Consensus 143 pL~~A~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~~~~~~~~l-~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLA----KGARTDLRNIEKKLAFDMATNAACASLL-KKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHH----HTCCSCCCCTTSCCHHHHCCSHHHHHHH-C----------------
T ss_pred HHHHHHHcCCHHHHHHHHH----cCCCCccccCCCCCHHHHhcchhHHHHH-HHHhccchhhhccchhh
Confidence 8888888888888888888 6788888888888888888888777776 44455777777766655
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=2.2e-24 Score=168.14 Aligned_cols=111 Identities=17% Similarity=0.073 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHH
Q 045346 19 DQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYA 98 (352)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 98 (352)
+..|.||||+|+..|+.++++.|++++.++ +.++ ..|.||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTL-EGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCC-TTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 445667777777777777777777777665 6666 67777777777777777777777777766 66677777777777
Q ss_pred HhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHH
Q 045346 99 MVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLA 136 (352)
Q Consensus 99 ~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~ 136 (352)
+..|+.+++++|++ .+.+++.+|.+|+||||+|+
T Consensus 81 ~~~~~~~~v~~Ll~----~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 81 VYEGHVSCVKLLLS----KGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCC
T ss_pred HHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHhC
Confidence 77777777777777 56667777777777777763
No 94
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=3e-24 Score=174.56 Aligned_cols=134 Identities=15% Similarity=0.091 Sum_probs=115.9
Q ss_pred cccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCc
Q 045346 51 IANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENT 130 (352)
Q Consensus 51 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 130 (352)
..+ +.|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+ +|+.+++++|++ .|.++|.+|.+|+|
T Consensus 7 ~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~----~g~~~~~~d~~g~t 79 (156)
T 1bi7_B 7 SSM-EPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLL----HGAEPNCADPATLT 79 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHT----TTCCCCCCCTTTCC
T ss_pred CCC-ccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHH----cCCCCCCcCCCCCc
Confidence 345 78999999999999999999999999998 888999999999985 899999999999 78899999999999
Q ss_pred -HHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCCcc
Q 045346 131 -PLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYSNG 195 (352)
Q Consensus 131 -~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~~~ 195 (352)
|||+|+..|+.++++ +|.++|++++.+|.+|+||+|+|+..++. +++++|.+.|+.+....
T Consensus 80 tpL~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~---~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLV-VLHRAGARLDVRDAWGRLPVDLAEELGHR---DVARYLRAAAGGTRGSN 141 (156)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHHTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHSSCC-------
T ss_pred HHHHHHHHCCCHHHHH-HHHHcCCCCcccCCCCCCHHHHHHHhCHH---HHHHHHHHcCCCCCccC
Confidence 999999999999985 55568999999999999999999999765 99999999988775543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=7.7e-24 Score=190.88 Aligned_cols=141 Identities=19% Similarity=0.106 Sum_probs=118.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCcccc------ccCCCCCcHHHHHHhc---CcHHHHHHHHhhCCCccccccCCC
Q 045346 21 YGWTPIHYAAYYGNYGMVNLLLEIDQSASNI------ANKDRKMTALHLAAGR---GHARTVETILSLSPDCYELVDNKG 91 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g 91 (352)
.+.++||.|+..|+.+.++.|++.+.++ +. .+ ..|.||||+|+.. |+.+++++|+++++++ +.+|.+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G 226 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADG 226 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSC-SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccC-CCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCC
Confidence 3457899999999999999999998887 44 46 7899999999997 8999999999999998 8889999
Q ss_pred CchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhh
Q 045346 92 WNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSY 171 (352)
Q Consensus 92 ~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~ 171 (352)
+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+++ .+|.+.|++ .|.||||+|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~G~TpL~~A~~~~~~~iv-~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHHKECE-ELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH----TTCCCSCCCTTSCCHHHHHHHHTCHHHH-HHHHHHHHH------TTSSCCC----
T ss_pred CCHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHhcCC------CCCChhHHHHh
Confidence 999999999999999999999 7889999999999999999999999888 455567765 68999999998
Q ss_pred cCCC
Q 045346 172 GYPK 175 (352)
Q Consensus 172 ~~~~ 175 (352)
.++.
T Consensus 296 ~g~~ 299 (301)
T 2b0o_E 296 WVIS 299 (301)
T ss_dssp ----
T ss_pred cCCc
Confidence 7653
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.4e-23 Score=163.45 Aligned_cols=111 Identities=18% Similarity=0.090 Sum_probs=102.4
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHH
Q 045346 55 DRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHV 134 (352)
Q Consensus 55 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~ 134 (352)
..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..|+.+++++|++ .+.++|.+|.+|+||||+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLL----KGADINAPDKHHITPLLS 79 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHT----TTCCTTCCCTTSCCHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCcCCCCCCCHHHH
Confidence 57889999999999999999999999998 8889999999999999999999999999 788999999999999999
Q ss_pred HHhcCChHHHHHHHhhcCccccccccCCcchHHHHhh
Q 045346 135 LAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSY 171 (352)
Q Consensus 135 A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~ 171 (352)
|+..++.++++ +|.+.|++++.+|.+|+||+|+|..
T Consensus 80 A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 80 AVYEGHVSCVK-LLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999985 5556899999999999999999943
No 97
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=1.7e-24 Score=200.52 Aligned_cols=156 Identities=13% Similarity=0.038 Sum_probs=125.6
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHhhcCCCcc--ccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCcc--ccccCCCC
Q 045346 17 ETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSAS--NIANKDRKMTALHLAAGRGHARTVETILSLSPDCY--ELVDNKGW 92 (352)
Q Consensus 17 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~--~~~d~~g~ 92 (352)
..+.+++||||+|++.|+.+++++|++++.... ...+ ..|.||||+|+.+|+.++|++|++++++.. +..+.+ +
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~-~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-Y 164 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--C-HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-H
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-C
Confidence 345667899999999999999999999886321 1233 467899999999999999999999998631 222333 9
Q ss_pred chhHHHHhcCCHHHHHHHHhcCchhhhhhcc--CCCCCCcHHHHHH-hcCChHHHHHHHhhcCccccccccCCcchHHHH
Q 045346 93 NFLHYAMVSFRVEQLTNLLENNPLARSLINE--GDAMENTPLHVLA-AVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIF 169 (352)
Q Consensus 93 t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~--~d~~G~T~Lh~A~-~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a 169 (352)
||||+|+.+|+.+++++|++ .|.+++. +|.+|+||||+|+ ..|+.++++.|+ +.|+ .|.||+++|
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~----~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll-~~ga-------~~~taL~~A 232 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCE----LAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLL-DCPV-------MLAYAEIHE 232 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHH----SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHT-TSHH-------HHHHHHHCT
T ss_pred CHHHHHHHCCCHHHHHHHHH----cCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHH-hCCC-------ccchHHHHH
Confidence 99999999999999999999 6677776 8889999999999 999999996555 4664 389999999
Q ss_pred hhcCCCcHHHHHHHHHHcCC
Q 045346 170 SYGYPKLKEEIQKLSKDFGR 189 (352)
Q Consensus 170 ~~~~~~~~~~i~~~l~~~g~ 189 (352)
+..|+. +++++|.+.|.
T Consensus 233 a~~g~~---evv~lL~~~ga 249 (376)
T 2aja_A 233 FEYGEK---YVNPFIARHVN 249 (376)
T ss_dssp TTTTTT---THHHHHHHHHH
T ss_pred HHCCCH---HHHHHHHhcCc
Confidence 999887 67777777553
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=4.9e-23 Score=177.18 Aligned_cols=167 Identities=14% Similarity=0.051 Sum_probs=126.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCC--------------CccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCc
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQ--------------SASNIANKDRKMTALHLAAGRGHARTVETILSLSPDC 83 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~--------------~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~ 83 (352)
.|..++++.+++.+.|....+..+.+.+- ...+..+ ..|.||||+|+..|+.++++.|++.++++
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 99 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA-ESIDNPLHEAAKRGNLSWLRECLDNRVGV 99 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHE-EEESCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccc-cccccccccccccCcHHHHHHHHhCCCCc
Confidence 35566777777777776543322221110 0012234 57899999999999999999999999998
Q ss_pred cccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCc
Q 045346 84 YELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNV 163 (352)
Q Consensus 84 ~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~ 163 (352)
+.+|..|+||||+|+.+|+.+++++|++. .+.++|.+|.+|+||||+|+..|+.++++ +|.+.|++++.+|.+|+
T Consensus 100 -~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~g~~~~~~d~~g~tpL~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~ 174 (222)
T 3ehr_A 100 -NGLDKAGSTALYWACHGGHKDIVEMLFTQ---PNIELNQQNKLGDTALHAAAWKGYADIVQ-LLLAKGARTDLRNIEKK 174 (222)
T ss_dssp -TCCCTTSCCHHHHHHHTTCHHHHHHHTTS---TTCCCCCCCTTSCCHHHHHHHHTCHHHHH-HHHHHTCCSCCCCTTSC
T ss_pred -cccCCCCCCHHHHHHHcCCHHHHHHHHcC---CCCCccccCCCCCCHHHHHHHcCCHHHHH-HHHHcCCCCccccCCCC
Confidence 88899999999999999999999999993 27899999999999999999999999985 55568999999999999
Q ss_pred chHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 164 SVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 164 Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
||+|+|+.. ...++++.+.+.|..+..
T Consensus 175 t~l~~A~~~---~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 175 LAFDMATNA---ACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CHHHHCCSH---HHHHHHC-----------
T ss_pred CHHHHhcch---hHHHHHHHHhccchhhhc
Confidence 999999987 566888888887766543
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1e-23 Score=176.14 Aligned_cols=136 Identities=18% Similarity=0.151 Sum_probs=114.2
Q ss_pred HHcCCHHHHHHHhhcCCCcc----------ccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHH
Q 045346 30 AYYGNYGMVNLLLEIDQSAS----------NIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAM 99 (352)
Q Consensus 30 ~~~g~~~~v~~Ll~~~~~~~----------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (352)
++.|..+.+++|++.+.... ...+ .+|.||||+|+..|+.++++.|++ +.++ +.+|.+|+||||+|+
T Consensus 8 a~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~ 84 (183)
T 3deo_A 8 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV-SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVA 84 (183)
T ss_dssp EEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHH-HHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHH
T ss_pred HHhcCCchhHHHHHHhCCCCccccchhcccccCC-CCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHH
Confidence 34455566666665422211 1123 578999999999999999999999 8887 889999999999999
Q ss_pred hcCCHHHHHHHHhcCchhhhhhccCC-CCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcC
Q 045346 100 VSFRVEQLTNLLENNPLARSLINEGD-AMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGY 173 (352)
Q Consensus 100 ~~~~~~~v~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~ 173 (352)
.+|+.+++++|++ .|.++|.+| .+|+||||+|+..|+.++++ +|.++|++++.+|.+|+||+|+|+..+
T Consensus 85 ~~~~~~~v~~Ll~----~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 85 GLGSDKCVRLLAE----AGADLDHRDMRGGLTALHMAAGYVRPEVVE-ALVELGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHTCHHHHHHHHH----TTCCTTCCCSSSSCCHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTTSCCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH----cCCCCCcCCCCCCCCHHHHHHhcCcHHHHH-HHHHcCCCCcCCCCCCCCHHHHHHHhc
Confidence 9999999999999 788999998 89999999999999999985 555689999999999999999998754
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=5.5e-22 Score=191.05 Aligned_cols=138 Identities=19% Similarity=0.116 Sum_probs=115.0
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCccccc------cCCCCCcHHHHHHh---cCcHHHHHHHHhhCCCccccccCCCC
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSASNIA------NKDRKMTALHLAAG---RGHARTVETILSLSPDCYELVDNKGW 92 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~~g~tpLh~A~~---~g~~~~v~~Ll~~~~~~~~~~d~~g~ 92 (352)
..+.||.|+..|+.+.++.|+++|+++ +.+ + ..|.||||+|+. .|+.+++++|+++|+++ +.+|.+|+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~-~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~ 208 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN 208 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSC-CSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccc-cccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCC
Confidence 447899999999999999999999887 555 6 789999999976 89999999999999998 88999999
Q ss_pred chhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHH
Q 045346 93 NFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRH 167 (352)
Q Consensus 93 t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~ 167 (352)
||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+.+++ .+|.++|++++..+.+..+++.
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~----~ga~~~~~d~~g~tpl~~A~~~~~~~~~-~~Ll~~ga~~~~~~~h~~~~~~ 278 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLK----GRALVGTVNEAGETALDIARKKHHKECE-ELLEQAQAGTFAFPLHVDYSWV 278 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHH----TCCCCSCCCTTCCCHHHHHHHTTCHHHH-HHHHHTCC--------------
T ss_pred cHHHHHHHcCCHHHHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHhCCCCCCCcceeecccc
Confidence 99999999999999999999 7899999999999999999999999988 5666799998875444333333
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=5.3e-22 Score=183.20 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=113.2
Q ss_pred CCCCChHHHHHHHc-CCHHHHHHHhhcCCCccccccC-CCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhH
Q 045346 19 DQYGWTPIHYAAYY-GNYGMVNLLLEIDQSASNIANK-DRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLH 96 (352)
Q Consensus 19 d~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 96 (352)
+..+.||||.|+.. |+.++++.|++++.++ +..+. ..|.||||+|+..|+.+++++|+++++++ +..|..|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 34567899999999 9999999999999988 55542 58999999999999999999999999998 889999999999
Q ss_pred HHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhh--cCccccccccCCcchHHHHhhc
Q 045346 97 YAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKK--TQANYDAVNKRNVSVRHIFSYG 172 (352)
Q Consensus 97 ~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~--~g~~~~~~n~~g~Tpl~~a~~~ 172 (352)
+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.++++.|+.. .+.+....+..+.|+++++...
T Consensus 274 ~A~~~g~~~~v~~LL~----~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 274 HATILGHTGLACLFLK----RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHH----CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999999999 7899999999999999999999999998655442 2244456677888999888654
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=3.8e-21 Score=171.27 Aligned_cols=167 Identities=15% Similarity=0.104 Sum_probs=136.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCCC-------cc-------------cc-----cc----CCCCCcHHHHHHhcC
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQS-------AS-------------NI-----AN----KDRKMTALHLAAGRG 68 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-------~~-------------~~-----~~----~~~g~tpLh~A~~~g 68 (352)
.|..+.++++.+...|+..+.+++...-+. .. +. .. .....++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 678899999999999997776665432111 10 00 00 011246899999999
Q ss_pred cHHHHHHHHhhCCCcc-----ccccCCCCchhHHHHhc---CCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCC
Q 045346 69 HARTVETILSLSPDCY-----ELVDNKGWNFLHYAMVS---FRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRP 140 (352)
Q Consensus 69 ~~~~v~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~ 140 (352)
+.+.++.+++.++++. +..|..|+||||+|+.. |+.+++++|++ .|+++|.+|.+|+||||+|+..|+
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~----~ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ----NSGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH----HCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH----CCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999863 34588999999999999 89999999999 789999999999999999999999
Q ss_pred hHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCC
Q 045346 141 KEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQY 192 (352)
Q Consensus 141 ~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~ 192 (352)
.++++ +|.++|++++.+|.+|+||||+|+..++. +++++|.+.|+++.
T Consensus 218 ~~~v~-~Ll~~gad~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 218 AECLK-LLLRGKASIEIANESGETPLDIAKRLKHE---HCEELLTQALSGRF 265 (278)
T ss_dssp HHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHTTCC
T ss_pred HHHHH-HHHHcCCCCCCccCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCC
Confidence 99985 55569999999999999999999999765 89999999877643
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=5.2e-22 Score=178.88 Aligned_cols=126 Identities=17% Similarity=0.077 Sum_probs=107.6
Q ss_pred HHHHHHHHhccccccc------cCCCCChHHHHHHHc---CCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHH
Q 045346 2 AALRKLVEEKKKMIKE------TDQYGWTPIHYAAYY---GNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHART 72 (352)
Q Consensus 2 e~v~~lL~~~~~~~~~------~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~ 72 (352)
+.+++++. .+.+++. .|..|+||||+|+.. |+.+++++|+++++++ +.+| ..|.||||+|+..|+.++
T Consensus 165 ~~v~~ll~-~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d-~~G~TpLh~A~~~g~~~~ 241 (301)
T 2b0o_E 165 LSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKA-ADGNTALHYAALYNQPDC 241 (301)
T ss_dssp HHHHHHHH-TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCC-TTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHh-cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCC-CCCCCHHHHHHHcCCHHH
Confidence 45677774 7777887 689999999999997 8999999999999998 8888 899999999999999999
Q ss_pred HHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCCh
Q 045346 73 VETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPK 141 (352)
Q Consensus 73 v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~ 141 (352)
+++|+++|+++ +.+|.+|+||||+|+..|+.+++++|++ .+.+ .|+||||+|++.|+.
T Consensus 242 v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~----~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 242 LKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ----AQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHH----HHHH------TTSSCCC--------
T ss_pred HHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH----hcCC------CCCChhHHHHhcCCc
Confidence 99999999998 8899999999999999999999999998 5554 589999999998853
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=2.2e-23 Score=182.31 Aligned_cols=142 Identities=16% Similarity=0.069 Sum_probs=120.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHH
Q 045346 20 QYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAM 99 (352)
Q Consensus 20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 99 (352)
..+.+++.+++..|+.+.++.+...+.+ .+ ..|.||||+|+..|+.++++.|++ +.++ +.+|.+|+||||+|+
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~----~~-~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~ 85 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD----VV-SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVA 85 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH----HH-HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHH
T ss_pred CCCccHHHHHHHcCCCcccccccccccc----cc-cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHH
Confidence 3466777777777776665554443322 23 578999999999999999999999 8887 889999999999999
Q ss_pred hcCCHHHHHHHHhcCchhhhhhccCC-CCCCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcC
Q 045346 100 VSFRVEQLTNLLENNPLARSLINEGD-AMENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGY 173 (352)
Q Consensus 100 ~~~~~~~v~~Ll~~~~~~~~~~n~~d-~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~ 173 (352)
.+|+.+++++|++ .|.++|.+| .+|+||||+|+..|+.++++ +|.++|++++.+|.+|+||+|+|+..+
T Consensus 86 ~~g~~~~v~~Ll~----~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 86 GLGSDKCVRLLAE----AGADLDHRDMRGGLTALHMAAGYVRPEVVE-ALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HHTCHHHHHHHHH----TTCCTTCCCSSSCCCHHHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred HCCCHHHHHHHHH----cCCCCCcCCCCCCCCHHHHHHHcCCHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 9999999999999 788999998 88999999999999999985 555689999999999999999998653
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=8e-22 Score=151.52 Aligned_cols=107 Identities=27% Similarity=0.229 Sum_probs=52.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHH
Q 045346 18 TDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHY 97 (352)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 97 (352)
+|.+|+||||+|+..|+.++++.|++++.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+|.+|+||||+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARS-KDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHL 81 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCC-SSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 3445555555555555555555555554444 4444 44555555555555555555555555444 4444455555555
Q ss_pred HHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcH
Q 045346 98 AMVSFRVEQLTNLLENNPLARSLINEGDAMENTP 131 (352)
Q Consensus 98 A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~ 131 (352)
|+..++.+++++|++ .|+++|.++..|.||
T Consensus 82 A~~~~~~~~~~~Ll~----~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA----KGADVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHT----TSSSHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHH----cCCCCCcCCcccccc
Confidence 555555555555544 344444444444444
No 106
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=5e-23 Score=190.67 Aligned_cols=154 Identities=16% Similarity=0.162 Sum_probs=119.9
Q ss_pred HHHHHHHHhccc---cccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCc--cccccCCCCCcHHHHHHhcCcHHHHHHH
Q 045346 2 AALRKLVEEKKK---MIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSA--SNIANKDRKMTALHLAAGRGHARTVETI 76 (352)
Q Consensus 2 e~v~~lL~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~tpLh~A~~~g~~~~v~~L 76 (352)
|+++.|++ .+. ..+..|..|+||||+|++.|+.+++++|++++++. .+..+ .+ .||||+|+.+|+.+++++|
T Consensus 106 e~v~~Ll~-~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~-~~-~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 106 SALDTLCL-LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA-EN-YHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp HHHHHHTT-C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH-HH-HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH-cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC-CC-CCHHHHHHHCCCHHHHHHH
Confidence 56777776 443 12344567889999999999999999999999752 13333 23 8999999999999999999
Q ss_pred HhhCCCcccc--ccCCCCchhHHHH-hcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCc
Q 045346 77 LSLSPDCYEL--VDNKGWNFLHYAM-VSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQA 153 (352)
Q Consensus 77 l~~~~~~~~~--~d~~g~t~Lh~A~-~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~ 153 (352)
+++|+++ +. .|.+|+||||+|+ .+|+.+++++|++ .|. .|+||||+|+..|+.+++ ++|.+.|+
T Consensus 183 l~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~----~ga-------~~~taL~~Aa~~g~~evv-~lL~~~ga 249 (376)
T 2aja_A 183 CELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLD----CPV-------MLAYAEIHEFEYGEKYVN-PFIARHVN 249 (376)
T ss_dssp HHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT----SHH-------HHHHHHHCTTTTTTTTHH-HHHHHHHH
T ss_pred HHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHh----CCC-------ccchHHHHHHHCCCHHHH-HHHHhcCc
Confidence 9999987 54 7889999999999 9999999999998 443 289999999999999977 56666888
Q ss_pred cccccccCCcchHHHHhhcCCC
Q 045346 154 NYDAVNKRNVSVRHIFSYGYPK 175 (352)
Q Consensus 154 ~~~~~n~~g~Tpl~~a~~~~~~ 175 (352)
+++..+. +++.|+..|+.
T Consensus 250 ~~~~~~~----~l~~A~~~g~~ 267 (376)
T 2aja_A 250 RLKEMHD----AFKLSNPDGVF 267 (376)
T ss_dssp HHHHHHT----TTTTTSSSSCC
T ss_pred ccccccH----HHHHHHHCCCh
Confidence 7765543 45555554443
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=2.2e-21 Score=172.79 Aligned_cols=126 Identities=17% Similarity=0.181 Sum_probs=113.7
Q ss_pred CChHHHHHHHcCCHHHHHHHhhcCCCcc-----ccccCCCCCcHHHHHHhc---CcHHHHHHHHhhCCCccccccCCCCc
Q 045346 22 GWTPIHYAAYYGNYGMVNLLLEIDQSAS-----NIANKDRKMTALHLAAGR---GHARTVETILSLSPDCYELVDNKGWN 93 (352)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t 93 (352)
..++||.|+..|+.+.++.+++.+.+.. +..+ ..|.||||+|+.. |+.+++++|+++|+++ +.+|.+|+|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~-~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGH-EPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCS-STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccc-cCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCC
Confidence 4578999999999999999999988752 3346 7899999999999 8999999999999998 889999999
Q ss_pred hhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhcCcc
Q 045346 94 FLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKTQAN 154 (352)
Q Consensus 94 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~g~~ 154 (352)
|||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..|+.++++ +|.+.|++
T Consensus 208 pLh~A~~~g~~~~v~~Ll~----~gad~~~~d~~g~tpL~~A~~~~~~~~v~-~Ll~~ga~ 263 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLR----GKASIEIANESGETPLDIAKRLKHEHCEE-LLTQALSG 263 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHH-HHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHH----cCCCCCCccCCCCCHHHHHHHcCCHHHHH-HHHHcCCC
Confidence 9999999999999999999 78999999999999999999999999884 55556664
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=3.7e-21 Score=142.03 Aligned_cols=89 Identities=37% Similarity=0.483 Sum_probs=61.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHh
Q 045346 21 YGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMV 100 (352)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 100 (352)
+|+||||+|+..|+.+++++|++++.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+|.+|+||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence 3667777777777777777777766666 6666 56777777777777777777777777666 6666677777777777
Q ss_pred cCCHHHHHHHHh
Q 045346 101 SFRVEQLTNLLE 112 (352)
Q Consensus 101 ~~~~~~v~~Ll~ 112 (352)
.|+.+++++|++
T Consensus 78 ~~~~~~~~~Ll~ 89 (93)
T 1n0q_A 78 NGHLEVVKLLLE 89 (93)
T ss_dssp TTCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 777777777666
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=5.7e-21 Score=141.04 Aligned_cols=93 Identities=32% Similarity=0.359 Sum_probs=82.9
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcHHHHH
Q 045346 56 RKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTPLHVL 135 (352)
Q Consensus 56 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A 135 (352)
+|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE----AGADVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCCccCCCCCCHHHHH
Confidence 4889999999999999999999999998 8889999999999999999999999999 7888999999999999999
Q ss_pred HhcCChHHHHHHHhhcCcc
Q 045346 136 AAVRPKEFHAVMIKKTQAN 154 (352)
Q Consensus 136 ~~~~~~~~~~~lL~~~g~~ 154 (352)
+..|+.++++ +|.+.|++
T Consensus 76 ~~~~~~~~~~-~Ll~~ga~ 93 (93)
T 1n0q_A 76 ARNGHLEVVK-LLLEAGAY 93 (93)
T ss_dssp HHTTCHHHHH-HHHHTTCC
T ss_pred HHcCCHHHHH-HHHHcCCC
Confidence 9999999885 45557764
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=2.5e-21 Score=148.75 Aligned_cols=109 Identities=25% Similarity=0.229 Sum_probs=99.2
Q ss_pred cccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCc
Q 045346 51 IANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENT 130 (352)
Q Consensus 51 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 130 (352)
.+| .+|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++.+++++|++ .+.+++.+|.+|+|
T Consensus 4 ~~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~----~g~~~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGS-KDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA----KGADVNARSKDGNT 77 (115)
T ss_dssp CCS-CSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTT----TTCCTTCCCTTCCC
T ss_pred ccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH----cCCCCcccCCCCCC
Confidence 356 79999999999999999999999999998 8889999999999999999999999999 78899999999999
Q ss_pred HHHHHHhcCChHHHHHHHhhcCccccccccCCcchH
Q 045346 131 PLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVR 166 (352)
Q Consensus 131 ~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl 166 (352)
|||+|+..++.+++ ++|.++|++++.++..|.||-
T Consensus 78 pl~~A~~~~~~~~~-~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIV-KLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHH-HHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHCCCHHHH-HHHHHcCCCCCcCCccccccc
Confidence 99999999999998 556679999999999999885
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=6.2e-20 Score=176.74 Aligned_cols=128 Identities=17% Similarity=0.120 Sum_probs=113.6
Q ss_pred CCcHHHHHHhcCcHHHHHHHHhhCCCccccc------cCCCCchhHHHHh---cCCHHHHHHHHhcCchhhhhhccCCCC
Q 045346 57 KMTALHLAAGRGHARTVETILSLSPDCYELV------DNKGWNFLHYAMV---SFRVEQLTNLLENNPLARSLINEGDAM 127 (352)
Q Consensus 57 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~------d~~g~t~Lh~A~~---~~~~~~v~~Ll~~~~~~~~~~n~~d~~ 127 (352)
..+.||.|+..|+.+.++.|++.|+++ +.. |..|+||||+||. .|+.+++++|++ .|+++|.+|.+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~----~ga~vn~~d~~ 206 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ----NGGHLDAKAAD 206 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH----HSCCTTCCCSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH----cCCCCCccCCC
Confidence 347899999999999999999999998 544 8899999999966 899999999999 88999999999
Q ss_pred CCcHHHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCCCCCC
Q 045346 128 ENTPLHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGRGQYS 193 (352)
Q Consensus 128 G~T~Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~~~~~ 193 (352)
|+||||+|+..|+.+++ ++|.++|++++.+|++|+||||+|+..++. +++++|.+.|+++..
T Consensus 207 g~TpLh~A~~~g~~~~v-~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCL-KLLLKGRALVGTVNEAGETALDIARKKHHK---ECEELLEQAQAGTFA 268 (497)
T ss_dssp SCCHHHHHTTTTCHHHH-HHHHHTCCCCSCCCTTCCCHHHHHHHTTCH---HHHHHHHHTCC----
T ss_pred CCcHHHHHHHcCCHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHhCCCCCC
Confidence 99999999999999998 555678999999999999999999999766 899999998876543
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=5.5e-20 Score=169.66 Aligned_cols=126 Identities=17% Similarity=0.110 Sum_probs=113.9
Q ss_pred CCCCcHHHHHHhc-CcHHHHHHHHhhCCCcccccc--CCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCCcH
Q 045346 55 DRKMTALHLAAGR-GHARTVETILSLSPDCYELVD--NKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMENTP 131 (352)
Q Consensus 55 ~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~ 131 (352)
..+.||||.|+.. |+.++++.|++.++++ +..| ..|+||||+|+..|+.+++++|++ .|+++|.+|.+|+||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~----~Gadvn~~d~~G~Tp 271 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQ----NGANVNQADSAGRGP 271 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHH----cCCCCCCCCCCCCCH
Confidence 3456899999999 9999999999999998 6677 899999999999999999999999 789999999999999
Q ss_pred HHHHHhcCChHHHHHHHhhcCccccccccCCcchHHHHhhcCCCcHHHHHHHHHHcCC
Q 045346 132 LHVLAAVRPKEFHAVMIKKTQANYDAVNKRNVSVRHIFSYGYPKLKEEIQKLSKDFGR 189 (352)
Q Consensus 132 Lh~A~~~~~~~~~~~lL~~~g~~~~~~n~~g~Tpl~~a~~~~~~~~~~i~~~l~~~g~ 189 (352)
||+|+..|+.++++ +|.+.|++++.+|.+|.||||+|+..++. +++++|+..+.
T Consensus 272 Lh~A~~~g~~~~v~-~LL~~Gad~~~~d~~G~TpL~~A~~~g~~---~iv~lLl~~~~ 325 (368)
T 3jue_A 272 LHHATILGHTGLAC-LFLKRGADLGARDSEGRDPLTIAMETANA---DIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHH-HHHHCcCCCCCcCCCCCCHHHHHHHCCCH---HHHHHHHHcCC
Confidence 99999999999884 55568999999999999999999999766 78888877653
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=5.1e-19 Score=134.81 Aligned_cols=96 Identities=20% Similarity=0.133 Sum_probs=71.4
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCC
Q 045346 12 KKMIKETDQYGWTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKG 91 (352)
Q Consensus 12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g 91 (352)
+......|.+|+||||+|+..|+.+++++|++++.++ +.+| ..|.||||+|+..|+.+++++|+++++++ +.+|..|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d-~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g 90 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKD-KNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFG 90 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCC
Confidence 3445667778888888888888888888888887776 7777 68888888888888888888888888877 7778888
Q ss_pred CchhHHHHhcCCHHHHHHH
Q 045346 92 WNFLHYAMVSFRVEQLTNL 110 (352)
Q Consensus 92 ~t~Lh~A~~~~~~~~v~~L 110 (352)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 8888888888888877765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=9.3e-18 Score=127.77 Aligned_cols=90 Identities=20% Similarity=0.190 Sum_probs=78.0
Q ss_pred ccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHHhcCchhhhhhccCCCCCC
Q 045346 50 NIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSFRVEQLTNLLENNPLARSLINEGDAMEN 129 (352)
Q Consensus 50 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~n~~d~~G~ 129 (352)
...+ .+|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.+|+.+++++|++ .|.+++.+|.+|+
T Consensus 18 ~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~ 91 (110)
T 2zgd_A 18 SHMG-SDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLE----AGADVXAQDKFGK 91 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH----TTCCTTCCCTTSC
T ss_pred cccC-CccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCccccccCCC
Confidence 4455 78899999999999999999999999888 7788999999999999999999999998 6788999999999
Q ss_pred cHHHHHHhcCChHHHH
Q 045346 130 TPLHVLAAVRPKEFHA 145 (352)
Q Consensus 130 T~Lh~A~~~~~~~~~~ 145 (352)
||||+|+..|+.++++
T Consensus 92 tpl~~A~~~~~~~~~~ 107 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAE 107 (110)
T ss_dssp CHHHHHHHHTCHHHHH
T ss_pred cHHHHHHHcCCHHHHH
Confidence 9999999999888774
No 115
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=58.74 E-value=17 Score=18.78 Aligned_cols=22 Identities=18% Similarity=0.378 Sum_probs=14.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHh
Q 045346 329 LGLAIITCLIGLSFFLLVIWIM 350 (352)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~ 350 (352)
.|-+|.-.+..+.|+.+.||.|
T Consensus 5 iweviaglvalltflafgfwlf 26 (32)
T 2lx0_A 5 IWEVIAGLVALLTFLAFGFWLF 26 (32)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555556777888876
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=46.96 E-value=93 Score=27.59 Aligned_cols=22 Identities=32% Similarity=0.523 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHh
Q 045346 303 LWLTLFSMGAMVIAFVTGTYAM 324 (352)
Q Consensus 303 ~~~~~~~~~~~~~af~~~~~~~ 324 (352)
-.++.++++++..+|++|+|-+
T Consensus 304 k~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 304 KVLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHHhhhcc
Confidence 3577788888999999999953
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=44.11 E-value=30 Score=30.55 Aligned_cols=22 Identities=32% Similarity=0.407 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhHh
Q 045346 303 LWLTLFSMGAMVIAFVTGTYAM 324 (352)
Q Consensus 303 ~~~~~~~~~~~~~af~~~~~~~ 324 (352)
-.++.+++.++..+|++|+|-+
T Consensus 280 k~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 280 KILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhccC
Confidence 3567778888899999999954
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.27 E-value=89 Score=24.68 Aligned_cols=107 Identities=12% Similarity=0.024 Sum_probs=65.0
Q ss_pred ChHHHHHHHcCCHHHHHHHhhcCCCccccccCCCCCcHHHHHHhcCcHHHHHHHHhhCCCccccccCCCCchhHHHHhcC
Q 045346 23 WTPIHYAAYYGNYGMVNLLLEIDQSASNIANKDRKMTALHLAAGRGHARTVETILSLSPDCYELVDNKGWNFLHYAMVSF 102 (352)
Q Consensus 23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 102 (352)
.+=+-+|.+.|+.+....+.+...+. . .-..-=..|...|+.++++.-.++..+. .+ .+.+....|
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~-~-----~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~------~~--L~~Ly~~tg 74 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDS-I-----TWERLIQEALAQGNASLAEMIYQTQHSF------DK--LSFLYLVTG 74 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCH-H-----HHHHHHHHHHHTTCHHHHHHHHHHTTCH------HH--HHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCH-H-----HHHHHHHHHHHcCChHHHHHHHHHhCCH------HH--HHHHHHHhC
Confidence 45577899999988877776532211 1 1112224577789999999888865554 22 334444567
Q ss_pred CHHHHHHHHhcCchhhhhhccCCCCCCcHHHHHHhcCChHHHHHHHhhc
Q 045346 103 RVEQLTNLLENNPLARSLINEGDAMENTPLHVLAAVRPKEFHAVMIKKT 151 (352)
Q Consensus 103 ~~~~v~~Ll~~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~~~~~lL~~~ 151 (352)
+.+-++.+.+. -....+-+.+.|.+-..|+.+-...+|.+.
T Consensus 75 ~~e~L~kla~i--------A~~~g~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 75 DVNKLSKMQNI--------AQTREDFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp CHHHHHHHHHH--------HHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred CHHHHHHHHHH--------HHHCccHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 66666655542 122334566777777788777666666643
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=20.76 E-value=67 Score=18.21 Aligned_cols=17 Identities=24% Similarity=0.135 Sum_probs=12.5
Q ss_pred HHHHHHcCCHHHHHHHh
Q 045346 26 IHYAAYYGNYGMVNLLL 42 (352)
Q Consensus 26 Lh~A~~~g~~~~v~~Ll 42 (352)
+..||+.|+.+.++.|=
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 56778888888777764
Done!