BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045349
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGDDH 80
E+ RR + L S++P+ SK+ +L DA SYI L + +E ++ L G
Sbjct: 438 ERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL-GYSS 496
Query: 81 TEP----SVMNITTSGSTLEVNLICGLNRNFMFHEIISILEEEAAEVINVTRFNSGDRVI 136
P S +N+ TSG + V + C L + I EE EVIN S D V+
Sbjct: 497 NPPISLDSDINVQTSGEDVTVRINCPL-ESHPASRIFHAFEESKVEVINSNLEVSQDTVL 555
Query: 137 --FSVQSK 142
F V+S+
Sbjct: 556 HTFVVKSE 563
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 19 INEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLE 69
++EK RR + + L S+IPS SK+ ILDD Y+ LQK + LE
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 12 SSRAQRNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERK 71
+ R++ I+E+ RR MKD + L SL+P+ +K+ I+ DA Y+ LQ + L+
Sbjct: 127 TDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSD 186
Query: 72 KALLK 76
A L+
Sbjct: 187 IAGLE 191
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 ANSSAAGSSSRAQRNI-NEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQ 62
++S +SS A +NI +E++RR + + L S++P+ +K+ I+ DA SYI LQ
Sbjct: 42 SSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ 101
Query: 63 KNKESLE 69
++ LE
Sbjct: 102 YEEKKLE 108
>sp|P28574|MAX_MOUSE Protein max OS=Mus musculus GN=Max PE=1 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 9 AGSSSRAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL----- 61
+ + RA N E+ RR +KD L +PS K S QILD AT YI ++
Sbjct: 20 SAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKND 79
Query: 62 --QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 80 THQQDIDDLKRQNALLE 96
>sp|P52164|MAX_RAT Protein max OS=Rattus norvegicus GN=Max PE=1 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 9 AGSSSRAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL----- 61
+ + RA N E+ RR +KD L +PS K S QILD AT YI ++
Sbjct: 20 SAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 79
Query: 62 --QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 80 THQQDIDDLKRQNALLE 96
>sp|P61244|MAX_HUMAN Protein max OS=Homo sapiens GN=MAX PE=1 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 9 AGSSSRAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL----- 61
+ + RA N E+ RR +KD L +PS K S QILD AT YI ++
Sbjct: 20 SAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 79
Query: 62 --QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 80 THQQDIDDLKRQNALLE 96
>sp|P61245|MAX_FELCA Protein max OS=Felis catus GN=MAX PE=2 SV=1
Length = 160
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 9 AGSSSRAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL----- 61
+ + RA N E+ RR +KD L +PS K S QILD AT YI ++
Sbjct: 20 SAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 79
Query: 62 --QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 80 THQQDIDDLKRQNALLE 96
>sp|P52162|MAX_CHICK Protein max OS=Gallus gallus GN=MAX PE=3 SV=1
Length = 160
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 9 AGSSSRAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL----- 61
+ + RA N E+ RR +KD L +PS K S QILD AT YI ++
Sbjct: 20 SAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 79
Query: 62 --QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 80 THQQDIDDLKRQNALLE 96
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 2 AGANSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHL 61
GA +A S+ ++E+ RR + ++ L SL+PS +++ IL + +Y+ L
Sbjct: 404 GGATGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKEL 463
Query: 62 QKNKESLERKK 72
Q+ + LE +
Sbjct: 464 QRRVQELESSR 474
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 36.6 bits (83), Expect = 0.061, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 2 AGANSSAAGSSSRAQRN--INEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIM 59
GA +A S +N ++E+ RR + ++ L SL+PS +++ IL + +Y+
Sbjct: 400 GGATGAAQEMSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLK 459
Query: 60 HLQKNKESLERKK 72
LQ+ + LE +
Sbjct: 460 ELQRRVQELESSR 472
>sp|Q63379|MYCN_RAT N-myc proto-oncogene protein OS=Rattus norvegicus GN=Mycn PE=3 SV=1
Length = 462
Score = 36.2 bits (82), Expect = 0.081, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 5 NSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPS---NSKLSMPQILDDATSYIMHL 61
NS + S R NI E+ RR ++ L +P N K + IL AT Y+ L
Sbjct: 372 NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHAL 431
Query: 62 QKN-------KESLE-RKKALLKGDDH 80
Q N KE L+ R++ LLK +H
Sbjct: 432 QANEHQLLLEKEKLQARQQQLLKKIEH 458
>sp|Q07016|MAX_XENLA Protein max OS=Xenopus laevis GN=max PE=2 SV=1
Length = 163
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLIPS--NSKLSMPQILDDATSYIMHL-------QKN 64
RA N E+ RR +KD L +PS K S QILD AT YI ++ Q++
Sbjct: 25 RAHHNALERKRRDHIKDSFHGLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQD 84
Query: 65 KESLERKKALLK 76
+ L+R+ ALL+
Sbjct: 85 IDDLKRQNALLE 96
>sp|P03966|MYCN_MOUSE N-myc proto-oncogene protein OS=Mus musculus GN=Mycn PE=2 SV=2
Length = 462
Score = 35.8 bits (81), Expect = 0.094, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 5 NSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPS---NSKLSMPQILDDATSYIMHL 61
NS + S R NI E+ RR ++ L +P N K + IL AT Y+ L
Sbjct: 372 NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHAL 431
Query: 62 QKN-------KESLE-RKKALLKGDDH 80
Q N KE L+ R++ LLK +H
Sbjct: 432 QANEHQLLLEKEKLQARQQQLLKKIEH 458
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLE 69
E+ RR + D + L SL+P +KL IL DA +Y+ LQ + L+
Sbjct: 319 ERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQ 367
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGDDH 80
E+ RR + L +++P+ SK+ +L DA +YI +QK E +K ++K +
Sbjct: 325 ERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMKRRES 384
Query: 81 TE--PSVMNITTSGSTLEVNLICGLNRNFMFHEIISILEEE 119
+ P+ ++ V L C L + + I ++ E E
Sbjct: 385 NQITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLRENE 425
>sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein 2 OS=Mus musculus GN=Npas2
PE=1 SV=1
Length = 816
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 12 SSRAQRNINEKHRRMLMKDLISQLASLIPSNS-KLSMPQILDDATSYIMHLQKNKE---- 66
+ RA RN +EK RR LI +L+S++P N+ K+ +L+ + LQK+ E
Sbjct: 9 AKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGF---LQKHNEVSAQ 65
Query: 67 ------SLERKKALLKGDDHTEPS-------VMNITTSGSTLEVN-----LICGLNRNFM 108
+ K + L ++ T+ V+ +TT GS + V+ L+ L + M
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHLPADVM 125
Query: 109 FHEIISIL-EEEAAEVINV 126
+++ L E+E +EV +
Sbjct: 126 DQNLLNFLPEQEHSEVYKI 144
>sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein 2 OS=Homo sapiens GN=NPAS2
PE=2 SV=3
Length = 824
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 12 SSRAQRNINEKHRRMLMKDLISQLASLIPSNS-KLSMPQILDDATSYIMHLQKNKE---- 66
+ RA RN +EK RR LI +L+S++P N+ K+ +L+ + LQK+ E
Sbjct: 9 AKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGF---LQKHNEVSAQ 65
Query: 67 ------SLERKKALLKGDDHTEPS-------VMNITTSGSTLEVN-----LICGLNRNFM 108
+ K + L ++ T+ ++ +TT GS + V+ L+ L + M
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHLPSDVM 125
Query: 109 FHEIISIL-EEEAAEVINV 126
+++ L E+E +EV +
Sbjct: 126 DQNLLNFLPEQEHSEVYKI 144
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 18 NINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQ 62
N++EK RR + + + L SLIP+++K +LD+A Y+ LQ
Sbjct: 203 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 247
>sp|O80482|BH149_ARATH Transcription factor bHLH149 OS=Arabidopsis thaliana GN=BHLH149
PE=1 SV=1
Length = 207
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 35 LASLIPSNSKLSMPQILDDATSYIMHLQ 62
L L+P K+S+P +LD+AT YI L+
Sbjct: 155 LGRLVPGCRKVSVPNLLDEATDYIAALE 182
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 17/95 (17%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLE----------- 69
EK RR + + L +IPS +K+ ILDD Y+ L++ + LE
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTETR 505
Query: 70 ------RKKALLKGDDHTEPSVMNITTSGSTLEVN 98
RKK G+ + N T +G + VN
Sbjct: 506 GTMTMKRKKPCDAGERTSANCANNETGNGKKVSVN 540
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 18 NINEKHRRMLMKDLISQLASLIPSNS---KLSMPQILDDATSYIMHLQKNKESLERKK 72
N +E+ RR + L S L S +P++ KLS+P+ + + YI LQ+ + L +KK
Sbjct: 77 NASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKK 134
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 2 AGANSS---AAGSSSRAQRNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYI 58
+G +SS AA S + ++ ++E++RR + + L S++P+ SKL ++ D+ Y+
Sbjct: 37 SGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYM 96
Query: 59 MHLQKNKESLE 69
L +++LE
Sbjct: 97 QELIDQEKTLE 107
>sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens GN=MYCN PE=1 SV=2
Length = 464
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 5 NSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPS---NSKLSMPQILDDATSYIMHL 61
NS + S R NI E+ RR ++ L +P N K + IL AT Y+ L
Sbjct: 374 NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSL 433
Query: 62 QK-------NKESLE-RKKALLKGDDH 80
Q KE L+ R++ LLK +H
Sbjct: 434 QAEEHQLLLEKEKLQARQQQLLKKIEH 460
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 21 EKHRRMLMKDLISQLASLIPS-NSKLSMPQILDDATSYIMHLQKNKESLERKK 72
E+ RR M+D+ S+L +L+P K I+D+A S I L++ + LE +K
Sbjct: 78 ERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK 130
>sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein 2 OS=Gallus gallus
GN=NPAS2 PE=2 SV=1
Length = 815
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 12 SSRAQRNINEKHRRMLMKDLISQLASLIPSNS-KLSMPQILDDATSYIMHLQKNKE 66
+ RA RN +EK RR LI +L+S++P N+ K+ +L+ + LQK+ E
Sbjct: 9 AKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGF---LQKHNE 61
>sp|P52161|MAX_DANRE Protein max OS=Danio rerio GN=max PE=2 SV=1
Length = 165
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 11 SSSRAQRNINEKHRRMLMKDLISQLASLIP-------SNSKLSMPQILDDATSYIMHL-- 61
+ RA N E+ RR +KD L +P S + S QILD AT YI ++
Sbjct: 22 ADKRAHHNALERKRRDHIKDSFHSLRDSVPALQGEKQSIKQASRAQILDKATEYIQYMRR 81
Query: 62 -----QKNKESLERKKALLK 76
Q++ + L+R+ ALL+
Sbjct: 82 KNHTHQQDIDDLKRQNALLE 101
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
E+ RR + L S++P+ SK+ +L DA SYI LQ+ + +E ++
Sbjct: 400 ERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDER 451
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 18 NINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQ 62
N++EK RR + + + L LIP+++K +LD+A Y+ LQ
Sbjct: 99 NLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
>sp|Q61976|MYCN_MARMO N-myc proto-oncogene protein OS=Marmota monax GN=MYCN PE=3 SV=1
Length = 460
Score = 33.1 bits (74), Expect = 0.71, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 5 NSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPS---NSKLSMPQILDDATSYIMHL 61
NS + S R NI E+ RR ++ L +P N K + IL AT Y+ L
Sbjct: 370 NSDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSL 429
Query: 62 QKNKESLERKKALLKG 77
Q + L +K L+
Sbjct: 430 QAEEHQLLLEKEKLQA 445
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 22 KHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQ 62
+ RR + D + L SL+P+ +K+ + +L+DA Y+ LQ
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQ 188
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGDDH 80
E+ RR + D + L S++P SK+ IL DA Y+ KE L+R L +
Sbjct: 312 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYL------KELLQRINDLHNELES 365
Query: 81 TEPSVMNITTS 91
T P + T+S
Sbjct: 366 TPPGSLPPTSS 376
>sp|P04460|MYH6_RABIT Myosin-6 (Fragment) OS=Oryctolagus cuniculus GN=MYH6 PE=2 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 41 SNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGD-DHTEPSVMNITTSGSTLEVNL 99
+ +KL + Q +DD + +K + LER K L+GD T+ S+M++ LE L
Sbjct: 218 TKAKLKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLEERL 277
Query: 100 ICGLNRNFMFHEIISILEEEAAEVINVTR 128
+ F ++ S +E+E A V+ + +
Sbjct: 278 K---KKEFDISQLNSKIEDEQALVLQLQK 303
>sp|Q6GQ26|SRBP2_XENLA Sterol regulatory element-binding protein 2 OS=Xenopus laevis
GN=srebf2 PE=2 SV=1
Length = 1088
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLI-PSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ +++K+ +L A YI +LQ+ + L ++
Sbjct: 292 RTTHNIIEKRYRSSINDKIMELKDLVMGTDAKMHKSGVLKKAIDYIKYLQQVNQKLRQEN 351
Query: 73 ALLK 76
LK
Sbjct: 352 MALK 355
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 2 AGANSSAAGSSSRAQ--RNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIM 59
AG SS + SRA N +E+ RR + + L L+P++SK +LD+ Y+
Sbjct: 201 AGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK 260
Query: 60 HLQ 62
LQ
Sbjct: 261 QLQ 263
>sp|Q60429|SRBP2_CRIGR Sterol regulatory element-binding protein 2 OS=Cricetulus griseus
GN=SREBF2 PE=2 SV=1
Length = 1139
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLI-PSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ +++K+ +L A YI +LQ+ L ++
Sbjct: 330 RTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQEN 389
Query: 73 ALLK 76
+LK
Sbjct: 390 MVLK 393
>sp|Q5CZ79|AN20B_HUMAN Ankyrin repeat domain-containing protein 20B OS=Homo sapiens
GN=ANKRD20A8P PE=2 SV=2
Length = 823
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 1 MAGANSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMH 60
+ + SSAA QR I + + + K L + + K ++ Q ++ T+ M
Sbjct: 403 ICDSTSSAAAGRLTQQRKIGKTYPQQFPKKLKEE-------HDKCTLKQENEEKTNVNML 455
Query: 61 LQKNKESLERKKALLKGD---DHTEPSVMNITTSGSTLEVNLICGLNRNFMFHE 111
+KN+E LERK+ K + EP+V ++ T NR+F HE
Sbjct: 456 YKKNREELERKEKQYKKEVEAKQLEPTVQSLEMKSKTARNT----PNRDFHNHE 505
>sp|Q3T1I5|SRBP2_RAT Sterol regulatory element-binding protein 2 OS=Rattus norvegicus
GN=Srebf2 PE=2 SV=1
Length = 1133
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLI-PSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ +++K+ +L A YI +LQ+ L ++
Sbjct: 324 RTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQEN 383
Query: 73 ALLK 76
+LK
Sbjct: 384 MVLK 387
>sp|Q3U1N2|SRBP2_MOUSE Sterol regulatory element-binding protein 2 OS=Mus musculus
GN=Srebf2 PE=1 SV=2
Length = 1130
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLI-PSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ +++K+ +L A YI +LQ+ L ++
Sbjct: 321 RTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQEN 380
Query: 73 ALLK 76
+LK
Sbjct: 381 MVLK 384
>sp|Q12772|SRBP2_HUMAN Sterol regulatory element-binding protein 2 OS=Homo sapiens
GN=SREBF2 PE=1 SV=2
Length = 1141
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLI-PSNSKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ +++K+ +L A YI +LQ+ L ++
Sbjct: 332 RTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQEN 391
Query: 73 ALLK 76
+LK
Sbjct: 392 MVLK 395
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 19 INEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLE 69
+ E+ RR + + L S++P +K+ IL D +Y+ HL+K LE
Sbjct: 366 VAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGDDH 80
E+ RR + + + L++L+P K +L+DA ++ LQ+ + LE ++ + K D
Sbjct: 137 ERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQ 196
Query: 81 T 81
+
Sbjct: 197 S 197
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 8 AAGSSSRAQ------RNINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHL 61
A GS+SR + N+ E+ RR + + + L LIP +K + LDDA Y+ L
Sbjct: 245 ARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSL 304
Query: 62 Q 62
Q
Sbjct: 305 Q 305
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 22 KHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLKGDDHT 81
+ RR + + I L +L+P +K+ +LD+A +Y+ L+ ++LE + L D T
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKL---DQT 341
Query: 82 EPSVMNITTSGSTLEVNLICGLNRNFMFH 110
S + TS + + N N + H
Sbjct: 342 NLSFSSAPTSFPLFHPSFLPLQNPNQIHH 370
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 17 RNINEKHRRMLMKDLISQLASLIPS-NSKLSMPQILDDATSYIMHLQKNKESLERKKALL 75
R+I E+ RR + + + +L L+P+ +++ + +LD A YI LQ+ ++LE +A
Sbjct: 315 RSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARC 374
Query: 76 K 76
+
Sbjct: 375 R 375
>sp|A3KNA7|SRBP2_DANRE Sterol regulatory element-binding protein 2 OS=Danio rerio
GN=srebf2 PE=2 SV=1
Length = 1099
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 14 RAQRNINEKHRRMLMKDLISQLASLIPSN-SKLSMPQILDDATSYIMHLQKNKESLERKK 72
R NI EK R + D I +L L+ N +K+ +L A YI +LQ+ L ++
Sbjct: 322 RTTHNIIEKRYRSSINDKILELRDLVLGNDAKMHKSGVLRKAIDYIKYLQQVNHKLRQEN 381
Query: 73 ALLK 76
LK
Sbjct: 382 LTLK 385
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 21 EKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYIMHLQKNKESLERKKALLK 76
E+ RR + L +++P+ SK+ +L DA SYI L+ + E K L+
Sbjct: 421 ERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQ 476
>sp|Q9HAP2|MLXIP_HUMAN MLX-interacting protein OS=Homo sapiens GN=MLXIP PE=1 SV=2
Length = 919
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 7 SAAGSSSRAQRNIN-EKHRRMLMKDLISQLASLIPSNSKLSMPQI-LDDATSYIMHLQKN 64
+ A +R ++I+ E+ RR +K L SLI +NSKL+ I L YI LQ+
Sbjct: 713 NVAALKNRQMKHISAEQKRRFNIKMCFDMLNSLISNNSKLTSHAITLQKTVEYITKLQQE 772
Query: 65 KESLERKKALLK 76
+ ++ + L+
Sbjct: 773 RGQMQEEARRLR 784
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 2 AGANSSAAGSS-SRAQR--NINEKHRRMLMKDLISQLASLIPSNSKLSMPQILDDATSYI 58
AG + + GS SR+ N++E+ RR + + + L LIP+ +K+ +LD+A Y+
Sbjct: 330 AGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 389
Query: 59 MHLQ 62
LQ
Sbjct: 390 KSLQ 393
>sp|Q9Z304|MYCS_MOUSE Protein S-Myc OS=Mus musculus GN=Mycs PE=2 SV=2
Length = 431
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 5 NSSAAGSSSRAQRNINEKHRRMLMKDLISQLASLIPS---NSKLSMPQILDDATSYIMHL 61
NS R N E+ RR +M+ L L+P N K + IL AT YI L
Sbjct: 341 NSDWENIERRRNHNRMERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTL 400
Query: 62 QKNKESL--ERKK 72
Q ++ L ERKK
Sbjct: 401 QADESKLLVERKK 413
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,924,708
Number of Sequences: 539616
Number of extensions: 1726028
Number of successful extensions: 6677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 6566
Number of HSP's gapped (non-prelim): 263
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)