Query 045351
Match_columns 349
No_of_seqs 150 out of 1249
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 12:23:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045351.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045351hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177 Long chain fatty acid 100.0 7.9E-46 1.7E-50 323.0 24.2 313 17-338 41-389 (596)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 7.2E-44 1.6E-48 328.4 27.7 307 28-345 8-335 (528)
3 KOG1176 Acyl-CoA synthetase [L 100.0 2.5E-42 5.4E-47 319.9 31.5 292 48-342 34-342 (537)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 6.1E-42 1.3E-46 325.9 28.6 304 28-342 11-334 (534)
5 PRK07788 acyl-CoA synthetase; 100.0 1.7E-41 3.7E-46 325.3 27.0 294 29-339 50-362 (549)
6 PTZ00342 acyl-CoA synthetase; 100.0 2.5E-41 5.4E-46 329.6 27.8 306 28-339 61-500 (746)
7 PLN02860 o-succinylbenzoate-Co 100.0 4.4E-41 9.4E-46 323.2 28.3 304 28-339 7-328 (563)
8 PLN02574 4-coumarate--CoA liga 100.0 2.6E-40 5.7E-45 317.6 32.4 322 5-338 16-358 (560)
9 PLN02246 4-coumarate--CoA liga 100.0 2.2E-40 4.8E-45 316.8 31.3 313 12-338 8-337 (537)
10 PLN02654 acetate-CoA ligase 100.0 3.4E-40 7.3E-45 321.8 31.2 309 28-342 87-442 (666)
11 PLN02861 long-chain-fatty-acid 100.0 1.2E-40 2.7E-45 324.6 27.3 299 28-339 43-422 (660)
12 PRK06334 long chain fatty acid 100.0 1.9E-40 4E-45 316.9 26.8 301 28-338 19-338 (539)
13 TIGR02316 propion_prpE propion 100.0 6.8E-40 1.5E-44 318.5 30.3 311 28-344 51-398 (628)
14 PLN02736 long-chain acyl-CoA s 100.0 4.9E-40 1.1E-44 320.6 29.3 300 28-339 44-415 (651)
15 PRK08180 feruloyl-CoA synthase 100.0 6.6E-40 1.4E-44 317.8 29.4 303 28-339 39-379 (614)
16 PLN02614 long-chain acyl-CoA s 100.0 4.9E-40 1.1E-44 320.3 27.0 298 28-339 45-425 (666)
17 PLN03052 acetate--CoA ligase; 100.0 1.1E-39 2.4E-44 319.5 29.2 307 28-342 174-514 (728)
18 PRK08314 long-chain-fatty-acid 100.0 2.2E-39 4.8E-44 310.6 30.1 308 22-339 6-344 (546)
19 PRK13295 cyclohexanecarboxylat 100.0 4E-39 8.8E-44 308.7 31.2 306 28-339 24-351 (547)
20 PLN02330 4-coumarate--CoA liga 100.0 5.2E-39 1.1E-43 307.9 31.8 317 12-338 13-342 (546)
21 PRK05857 acyl-CoA synthetase; 100.0 3.7E-39 8.1E-44 308.3 29.9 310 15-339 4-324 (540)
22 KOG1179 Very long-chain acyl-C 100.0 1.2E-39 2.7E-44 289.9 23.8 296 27-330 76-383 (649)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 5.8E-39 1.2E-43 312.2 30.4 307 31-342 60-403 (625)
24 PRK13382 acyl-CoA synthetase; 100.0 3.7E-39 7.9E-44 308.2 28.1 294 28-338 43-350 (537)
25 PRK07656 long-chain-fatty-acid 100.0 3.8E-39 8.3E-44 306.7 27.9 297 28-339 5-321 (513)
26 COG1022 FAA1 Long-chain acyl-C 100.0 4.7E-39 1E-43 300.5 26.8 314 28-348 16-400 (613)
27 PRK06839 acyl-CoA synthetase; 100.0 9E-39 1.9E-43 302.9 28.9 293 29-339 3-302 (496)
28 PRK03640 O-succinylbenzoic aci 100.0 1E-38 2.3E-43 301.5 28.9 295 28-344 2-297 (483)
29 PRK07529 AMP-binding domain pr 100.0 2.3E-38 4.9E-43 307.8 30.7 301 28-338 25-371 (632)
30 PRK07638 acyl-CoA synthetase; 100.0 1.9E-38 4.1E-43 300.0 29.2 290 28-339 1-293 (487)
31 PTZ00237 acetyl-CoA synthetase 100.0 6E-39 1.3E-43 312.1 26.1 305 28-339 58-419 (647)
32 PLN03102 acyl-activating enzym 100.0 1.1E-38 2.4E-43 307.2 27.4 303 28-341 14-340 (579)
33 PF00501 AMP-binding: AMP-bind 100.0 8.5E-40 1.8E-44 303.3 19.0 296 34-342 1-320 (417)
34 PRK05605 long-chain-fatty-acid 100.0 1.6E-38 3.5E-43 306.2 28.6 322 7-338 11-374 (573)
35 PRK08279 long-chain-acyl-CoA s 100.0 2E-38 4.3E-43 307.1 29.2 299 28-338 37-351 (600)
36 PRK00174 acetyl-CoA synthetase 100.0 3.5E-38 7.6E-43 307.2 31.0 300 28-340 66-410 (637)
37 PRK04319 acetyl-CoA synthetase 100.0 4.1E-38 8.8E-43 303.1 30.9 304 28-340 42-363 (570)
38 PRK12582 acyl-CoA synthetase; 100.0 1.1E-38 2.5E-43 309.7 27.1 302 28-339 49-391 (624)
39 PRK06145 acyl-CoA synthetase; 100.0 3.9E-38 8.4E-43 298.7 29.8 299 28-339 2-304 (497)
40 PRK06187 long-chain-fatty-acid 100.0 2.5E-38 5.5E-43 301.5 28.0 296 28-338 6-319 (521)
41 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.8E-38 8.2E-43 300.0 28.8 293 29-338 1-313 (515)
42 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.1E-38 1.3E-42 299.3 29.6 288 28-327 23-324 (527)
43 PRK10524 prpE propionyl-CoA sy 100.0 5.4E-38 1.2E-42 305.6 29.3 310 28-343 52-398 (629)
44 PLN02387 long-chain-fatty-acid 100.0 2.1E-38 4.5E-43 310.3 26.2 302 28-340 58-460 (696)
45 PRK06155 crotonobetaine/carnit 100.0 1.3E-37 2.8E-42 297.7 30.7 303 27-339 20-331 (542)
46 PRK08315 AMP-binding domain pr 100.0 2.6E-37 5.6E-42 297.2 32.0 313 18-339 8-355 (559)
47 PRK09274 peptide synthase; Pro 100.0 4.6E-38 1E-42 301.8 26.5 293 28-339 6-329 (552)
48 PRK05852 acyl-CoA synthetase; 100.0 2.3E-37 5E-42 295.8 31.1 304 28-338 16-333 (534)
49 PRK12583 acyl-CoA synthetase; 100.0 2.9E-37 6.2E-42 296.8 31.7 305 28-339 18-357 (558)
50 PRK06087 short chain acyl-CoA 100.0 1.7E-37 3.7E-42 297.6 29.6 304 28-338 23-339 (547)
51 PRK08316 acyl-CoA synthetase; 100.0 1.1E-37 2.3E-42 297.5 27.7 296 28-338 11-325 (523)
52 PRK12467 peptide synthase; Pro 100.0 5.8E-38 1.3E-42 350.4 29.9 291 28-339 3095-3391(3956)
53 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.1E-37 6.8E-42 295.1 30.7 305 28-338 22-348 (538)
54 PRK13388 acyl-CoA synthetase; 100.0 3E-37 6.5E-42 295.1 30.4 293 28-339 3-302 (540)
55 PRK10252 entF enterobactin syn 100.0 1.3E-37 2.8E-42 325.5 30.3 290 28-338 458-755 (1296)
56 PRK06188 acyl-CoA synthetase; 100.0 3.1E-37 6.8E-42 294.3 30.0 302 28-342 12-323 (524)
57 PRK07786 long-chain-fatty-acid 100.0 1.4E-37 3.1E-42 297.7 27.5 296 28-338 17-329 (542)
58 PRK13383 acyl-CoA synthetase; 100.0 2.4E-37 5.1E-42 294.5 28.0 291 28-339 35-331 (516)
59 PRK06060 acyl-CoA synthetase; 100.0 2E-37 4.3E-42 305.1 28.0 289 28-339 4-300 (705)
60 PLN02430 long-chain-fatty-acid 100.0 2.2E-37 4.8E-42 301.4 27.5 302 27-340 41-423 (660)
61 PRK12467 peptide synthase; Pro 100.0 1.6E-37 3.5E-42 346.8 30.2 293 28-338 1574-1873(3956)
62 PRK08043 bifunctional acyl-[ac 100.0 1.2E-37 2.6E-42 307.0 25.8 301 28-338 204-517 (718)
63 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.7E-37 7.9E-42 292.3 28.2 292 29-339 1-298 (502)
64 PRK07769 long-chain-fatty-acid 100.0 1.5E-37 3.3E-42 302.4 25.8 282 27-326 20-330 (631)
65 PRK05677 long-chain-fatty-acid 100.0 1.2E-36 2.7E-41 292.4 30.4 305 28-338 24-364 (562)
66 TIGR01217 ac_ac_CoA_syn acetoa 100.0 8.7E-37 1.9E-41 297.4 29.5 297 28-340 87-421 (652)
67 PTZ00216 acyl-CoA synthetase; 100.0 2.2E-37 4.7E-42 303.7 25.1 300 28-338 69-465 (700)
68 PRK07514 malonyl-CoA synthase; 100.0 1.3E-36 2.9E-41 288.6 29.8 297 28-338 3-307 (504)
69 PRK12316 peptide synthase; Pro 100.0 3.4E-37 7.3E-42 349.2 30.1 292 28-338 511-809 (5163)
70 PRK03584 acetoacetyl-CoA synth 100.0 1.4E-36 3E-41 296.8 30.1 297 28-339 86-419 (655)
71 PRK06018 putative acyl-CoA syn 100.0 1.5E-36 3.2E-41 290.7 28.8 304 28-338 10-331 (542)
72 TIGR03443 alpha_am_amid L-amin 100.0 8.6E-37 1.9E-41 320.7 29.2 302 28-338 236-568 (1389)
73 PRK07867 acyl-CoA synthetase; 100.0 2.3E-36 4.9E-41 288.2 29.1 293 28-338 5-303 (529)
74 PRK07470 acyl-CoA synthetase; 100.0 1.2E-36 2.6E-41 290.6 27.2 298 28-339 7-319 (528)
75 PRK06178 acyl-CoA synthetase; 100.0 2.3E-36 5.1E-41 290.9 29.4 322 10-338 14-366 (567)
76 PRK05620 long-chain-fatty-acid 100.0 2E-36 4.4E-41 291.7 28.3 306 28-338 10-336 (576)
77 PRK12316 peptide synthase; Pro 100.0 8.9E-37 1.9E-41 345.8 29.7 292 28-338 2003-2300(5163)
78 PRK12476 putative fatty-acid-- 100.0 6E-37 1.3E-41 297.1 24.4 281 28-326 34-341 (612)
79 PRK07008 long-chain-fatty-acid 100.0 1.6E-36 3.5E-41 290.1 26.8 304 28-338 10-331 (539)
80 PRK04813 D-alanine--poly(phosp 100.0 3.4E-36 7.5E-41 285.7 28.2 293 28-339 2-300 (503)
81 PRK06164 acyl-CoA synthetase; 100.0 6.7E-36 1.4E-40 286.2 30.2 302 28-338 10-332 (540)
82 PRK05851 long-chain-fatty-acid 100.0 1.2E-36 2.6E-41 290.0 24.9 292 30-339 4-317 (525)
83 PRK07798 acyl-CoA synthetase; 100.0 3.3E-36 7.1E-41 287.8 27.7 303 28-338 3-335 (533)
84 PRK05691 peptide synthase; Val 100.0 2.1E-36 4.6E-41 340.5 29.9 289 28-340 3720-4019(4334)
85 COG1021 EntE Peptide arylation 100.0 4.6E-37 1E-41 262.8 18.7 292 27-329 27-332 (542)
86 PRK08008 caiC putative crotono 100.0 4.9E-36 1.1E-40 285.6 27.9 304 28-338 7-325 (517)
87 PRK10946 entE enterobactin syn 100.0 7.8E-36 1.7E-40 285.3 29.0 284 28-327 25-325 (536)
88 PRK08633 2-acyl-glycerophospho 100.0 2.3E-36 5.1E-41 312.9 27.2 304 28-339 615-937 (1146)
89 PRK09088 acyl-CoA synthetase; 100.0 8.7E-36 1.9E-40 281.9 28.7 284 36-339 3-290 (488)
90 PRK05691 peptide synthase; Val 100.0 4.1E-36 8.8E-41 338.2 30.8 289 28-339 1131-1423(4334)
91 TIGR03205 pimA dicarboxylate-- 100.0 2E-35 4.3E-40 282.9 30.9 304 28-339 21-351 (541)
92 PLN02479 acetate-CoA ligase 100.0 1.3E-35 2.8E-40 285.6 28.2 301 28-337 20-346 (567)
93 PRK06710 long-chain-fatty-acid 100.0 1.6E-35 3.5E-40 284.9 28.9 304 28-338 24-361 (563)
94 PRK12492 long-chain-fatty-acid 100.0 1.7E-35 3.7E-40 284.5 28.3 305 28-338 24-371 (562)
95 PRK08162 acyl-CoA synthetase; 100.0 2.6E-35 5.7E-40 282.4 28.4 303 28-338 18-333 (545)
96 PRK09192 acyl-CoA synthetase; 100.0 1.6E-35 3.5E-40 285.6 27.0 284 28-327 21-324 (579)
97 TIGR02262 benz_CoA_lig benzoat 100.0 5.7E-35 1.2E-39 277.7 29.7 296 31-338 7-316 (508)
98 PRK05850 acyl-CoA synthetase; 100.0 1.3E-35 2.9E-40 286.3 25.2 282 28-327 1-313 (578)
99 PRK07059 Long-chain-fatty-acid 100.0 3.8E-35 8.3E-40 281.9 27.8 305 28-339 23-366 (557)
100 PRK07868 acyl-CoA synthetase; 100.0 3.8E-35 8.3E-40 296.4 28.8 295 27-337 446-756 (994)
101 PRK08751 putative long-chain f 100.0 5.4E-35 1.2E-39 281.1 28.4 326 7-338 3-367 (560)
102 KOG1256 Long-chain acyl-CoA sy 100.0 3.6E-35 7.9E-40 271.2 25.2 309 28-346 75-465 (691)
103 PRK07787 acyl-CoA synthetase; 100.0 1.1E-34 2.3E-39 273.2 28.9 266 41-338 11-279 (471)
104 PRK13390 acyl-CoA synthetase; 100.0 7.7E-35 1.7E-39 276.3 27.5 292 36-338 5-308 (501)
105 PRK06814 acylglycerophosphoeth 100.0 6.1E-35 1.3E-39 301.7 28.9 303 28-339 631-946 (1140)
106 PRK08308 acyl-CoA synthetase; 100.0 2.1E-34 4.6E-39 266.8 28.3 247 50-339 2-250 (414)
107 PRK09029 O-succinylbenzoic aci 100.0 2.6E-34 5.6E-39 269.7 27.8 274 29-339 3-278 (458)
108 TIGR01733 AA-adenyl-dom amino 100.0 2.3E-34 5.1E-39 266.0 27.1 268 60-339 1-274 (408)
109 PRK13391 acyl-CoA synthetase; 100.0 3.7E-34 8E-39 272.3 28.4 294 36-338 5-313 (511)
110 PRK08974 long-chain-fatty-acid 100.0 9.2E-34 2E-38 272.5 31.0 305 28-338 23-363 (560)
111 PRK08276 long-chain-fatty-acid 100.0 1.1E-33 2.3E-38 268.6 28.1 284 49-339 2-301 (502)
112 PRK07768 long-chain-fatty-acid 100.0 1.1E-33 2.3E-38 271.2 27.0 293 29-340 3-322 (545)
113 PRK07445 O-succinylbenzoic aci 100.0 4.2E-34 9.1E-39 267.1 23.5 250 58-341 19-270 (452)
114 PRK12406 long-chain-fatty-acid 100.0 4.8E-33 1E-37 264.6 29.0 288 48-339 3-310 (509)
115 TIGR01923 menE O-succinylbenzo 100.0 3E-33 6.6E-38 260.9 26.0 257 60-340 1-258 (436)
116 KOG1180 Acyl-CoA synthetase [L 100.0 1.8E-33 4E-38 249.8 18.6 321 18-348 30-450 (678)
117 PTZ00297 pantothenate kinase; 100.0 1E-31 2.2E-36 272.9 25.9 251 28-292 427-706 (1452)
118 KOG1175 Acyl-CoA synthetase [L 100.0 6.6E-31 1.4E-35 243.5 25.9 314 28-346 63-406 (626)
119 PLN03051 acyl-activating enzym 100.0 3.3E-31 7.2E-36 251.1 22.5 247 91-339 1-277 (499)
120 TIGR03089 conserved hypothetic 100.0 1.4E-28 3E-33 207.6 20.5 211 34-277 2-227 (227)
121 COG1020 EntF Non-ribosomal pep 100.0 7.7E-27 1.7E-31 228.0 27.2 290 28-339 227-521 (642)
122 KOG3628 Predicted AMP-binding 99.9 7.9E-20 1.7E-24 173.9 20.5 307 28-339 770-1108(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 99.8 7.5E-20 1.6E-24 166.5 15.7 145 186-339 95-244 (386)
124 PRK07824 O-succinylbenzoic aci 99.8 3.8E-18 8.2E-23 155.1 16.4 152 182-338 31-188 (358)
125 TIGR02155 PA_CoA_ligase phenyl 99.7 3E-16 6.4E-21 145.8 13.0 153 184-338 73-233 (422)
126 TIGR03335 F390_ftsA coenzyme F 99.6 1.6E-14 3.4E-19 134.7 12.2 152 183-338 83-242 (445)
127 KOG1178 Non-ribosomal peptide 99.6 6.2E-15 1.3E-19 144.4 8.9 288 29-326 37-351 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.2 3.1E-10 6.7E-15 102.1 11.8 157 183-340 87-250 (438)
129 KOG3628 Predicted AMP-binding 99.1 4.5E-10 9.8E-15 108.5 9.8 281 30-326 96-422 (1363)
130 TIGR02304 aden_form_hyp probab 98.5 2.2E-06 4.8E-11 79.0 12.6 140 188-336 101-248 (430)
131 PF04443 LuxE: Acyl-protein sy 97.0 0.017 3.6E-07 52.4 12.5 158 183-341 86-268 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.9 0.054 1.2E-06 49.7 9.2 82 57-140 108-191 (438)
133 TIGR03335 F390_ftsA coenzyme F 91.3 1.9 4.1E-05 40.5 10.1 79 57-139 104-184 (445)
134 TIGR02155 PA_CoA_ligase phenyl 89.7 2.7 5.8E-05 39.1 9.6 82 58-141 94-177 (422)
135 TIGR03089 conserved hypothetic 82.6 11 0.00024 31.8 8.8 54 76-132 171-226 (227)
136 PRK06187 long-chain-fatty-acid 78.6 27 0.00058 33.1 11.1 93 45-142 166-266 (521)
137 PF00501 AMP-binding: AMP-bind 74.6 29 0.00062 31.9 9.8 89 183-281 7-99 (417)
138 PRK07656 long-chain-fatty-acid 73.7 24 0.00051 33.5 9.3 93 45-142 165-266 (513)
139 PF01041 DegT_DnrJ_EryC1: DegT 73.1 9.2 0.0002 34.8 6.0 66 69-139 51-121 (363)
140 COG0399 WecE Predicted pyridox 73.0 18 0.00039 33.1 7.6 67 68-139 59-130 (374)
141 TIGR02370 pyl_corrinoid methyl 71.9 45 0.00097 27.4 9.2 87 230-319 86-182 (197)
142 KOG1177 Long chain fatty acid 71.6 23 0.00049 33.3 7.8 107 203-311 75-198 (596)
143 PLN02736 long-chain acyl-CoA s 70.5 77 0.0017 31.4 12.2 106 183-292 56-167 (651)
144 PF03321 GH3: GH3 auxin-respon 69.7 2.3 5E-05 40.9 1.3 31 183-213 77-108 (528)
145 TIGR01733 AA-adenyl-dom amino 68.9 48 0.001 30.2 9.9 97 45-145 119-225 (408)
146 cd01445 TST_Repeats Thiosulfat 67.6 16 0.00034 28.1 5.4 41 69-110 81-124 (138)
147 PRK06334 long chain fatty acid 65.8 53 0.0012 31.6 9.8 94 45-142 182-284 (539)
148 PRK12583 acyl-CoA synthetase; 65.7 85 0.0019 30.1 11.3 80 57-140 219-300 (558)
149 PRK09274 peptide synthase; Pro 65.1 55 0.0012 31.5 9.8 98 184-283 19-121 (552)
150 KOG1250 Threonine/serine dehyd 65.0 68 0.0015 29.4 9.2 88 45-140 80-169 (457)
151 TIGR02379 ECA_wecE TDP-4-keto- 64.8 33 0.00071 31.4 7.7 62 73-139 61-127 (376)
152 PRK08315 AMP-binding domain pr 64.4 68 0.0015 30.9 10.3 80 57-140 217-298 (559)
153 PLN03051 acyl-activating enzym 64.1 69 0.0015 30.4 10.2 93 45-141 118-218 (499)
154 PRK04319 acetyl-CoA synthetase 63.5 55 0.0012 31.7 9.5 94 45-142 204-306 (570)
155 PRK10696 tRNA 2-thiocytidine b 63.3 76 0.0016 27.3 9.3 70 68-138 13-94 (258)
156 KOG1176 Acyl-CoA synthetase [L 62.2 39 0.00084 32.7 7.9 89 203-292 43-136 (537)
157 PLN03102 acyl-activating enzym 61.9 83 0.0018 30.6 10.4 96 183-289 26-125 (579)
158 PRK02261 methylaspartate mutas 61.7 46 0.00099 25.5 6.9 55 229-283 5-62 (137)
159 PRK11706 TDP-4-oxo-6-deoxy-D-g 61.4 41 0.00088 30.8 7.7 61 74-139 62-127 (375)
160 TIGR01923 menE O-succinylbenzo 61.3 63 0.0014 29.8 9.2 90 45-141 110-207 (436)
161 PLN03052 acetate--CoA ligase; 60.5 94 0.002 31.4 10.7 99 184-285 188-290 (728)
162 PLN02249 indole-3-acetic acid- 60.3 4.5 9.8E-05 39.4 1.3 30 183-212 97-127 (597)
163 PTZ00342 acyl-CoA synthetase; 60.3 70 0.0015 32.5 9.7 117 183-309 73-206 (746)
164 PRK06839 acyl-CoA synthetase; 58.6 1.3E+02 0.0028 28.3 11.0 97 183-290 14-115 (496)
165 PRK06164 acyl-CoA synthetase; 58.1 72 0.0016 30.6 9.2 93 45-142 180-280 (540)
166 PRK00174 acetyl-CoA synthetase 58.1 1E+02 0.0022 30.5 10.4 96 184-284 80-179 (637)
167 PRK08316 acyl-CoA synthetase; 57.8 98 0.0021 29.4 10.1 86 204-290 35-123 (523)
168 TIGR03098 ligase_PEP_1 acyl-Co 57.4 58 0.0013 30.9 8.4 81 57-142 179-260 (515)
169 PTZ00237 acetyl-CoA synthetase 56.8 1.1E+02 0.0025 30.2 10.5 94 185-283 75-172 (647)
170 TIGR02188 Ac_CoA_lig_AcsA acet 56.8 1.1E+02 0.0023 30.1 10.4 97 183-284 69-169 (625)
171 PLN02247 indole-3-acetic acid- 56.8 11 0.00024 36.7 3.3 29 185-213 88-117 (606)
172 PLN02565 cysteine synthase 56.6 99 0.0021 27.7 9.1 92 46-140 30-122 (322)
173 PLN02654 acetate-CoA ligase 56.2 1.2E+02 0.0026 30.2 10.6 96 184-284 102-201 (666)
174 PRK08008 caiC putative crotono 56.0 1.2E+02 0.0026 28.8 10.3 101 183-289 19-123 (517)
175 PLN03013 cysteine synthase 55.8 1.4E+02 0.0031 27.9 10.1 91 47-140 139-230 (429)
176 PRK06188 acyl-CoA synthetase; 55.7 1.4E+02 0.0031 28.3 10.8 91 45-140 167-264 (524)
177 PRK07788 acyl-CoA synthetase; 55.5 73 0.0016 30.6 8.8 85 205-290 74-161 (549)
178 PLN02860 o-succinylbenzoate-Co 54.6 1.2E+02 0.0026 29.3 10.2 93 45-142 171-271 (563)
179 PRK08308 acyl-CoA synthetase; 54.5 1.6E+02 0.0035 27.0 10.7 93 45-142 100-201 (414)
180 PRK11658 UDP-4-amino-4-deoxy-L 54.3 65 0.0014 29.5 7.8 65 69-138 59-128 (379)
181 PLN02246 4-coumarate--CoA liga 53.9 1.3E+02 0.0028 28.9 10.2 95 45-140 178-281 (537)
182 PRK13388 acyl-CoA synthetase; 53.5 1.3E+02 0.0028 29.0 10.1 96 184-289 14-113 (540)
183 TIGR02262 benz_CoA_lig benzoat 53.4 1.4E+02 0.0031 28.2 10.4 94 45-141 160-262 (508)
184 cd02069 methionine_synthase_B1 53.3 77 0.0017 26.4 7.4 88 229-321 90-186 (213)
185 PRK07529 AMP-binding domain pr 53.3 1.1E+02 0.0023 30.3 9.7 97 183-283 37-137 (632)
186 PF02350 Epimerase_2: UDP-N-ac 52.9 69 0.0015 29.0 7.6 202 62-287 50-270 (346)
187 PRK03640 O-succinylbenzoic aci 52.9 1.7E+02 0.0037 27.4 10.8 93 45-142 140-240 (483)
188 cd02070 corrinoid_protein_B12- 52.8 1.3E+02 0.0028 24.7 10.5 86 229-317 84-178 (201)
189 PLN02387 long-chain-fatty-acid 52.6 1.4E+02 0.0029 30.1 10.3 87 204-292 105-195 (696)
190 PRK05857 acyl-CoA synthetase; 52.6 99 0.0021 29.7 9.2 96 182-285 25-123 (540)
191 PRK13295 cyclohexanecarboxylat 52.5 1.2E+02 0.0026 29.1 9.8 97 183-284 36-136 (547)
192 PRK03584 acetoacetyl-CoA synth 52.3 1.5E+02 0.0032 29.4 10.6 95 184-284 97-195 (655)
193 PRK05620 long-chain-fatty-acid 52.3 1.4E+02 0.003 28.9 10.2 94 45-140 180-281 (576)
194 PRK05677 long-chain-fatty-acid 52.2 1.3E+02 0.0029 29.0 10.1 95 184-288 37-135 (562)
195 PRK07470 acyl-CoA synthetase; 51.9 1.8E+02 0.004 27.7 10.9 96 45-142 162-265 (528)
196 TIGR01136 cysKM cysteine synth 51.5 1.7E+02 0.0037 25.7 10.7 92 46-140 22-113 (299)
197 PLN02574 4-coumarate--CoA liga 50.4 1.4E+02 0.003 28.9 9.8 99 183-290 51-154 (560)
198 COG0318 CaiC Acyl-CoA syntheta 49.9 2E+02 0.0043 27.8 10.7 95 45-141 170-274 (534)
199 PRK02261 methylaspartate mutas 49.7 1.2E+02 0.0025 23.3 7.6 55 85-139 4-62 (137)
200 TIGR03588 PseC UDP-4-keto-6-de 49.6 93 0.002 28.4 8.1 67 69-139 55-129 (380)
201 PRK07059 Long-chain-fatty-acid 49.6 1.5E+02 0.0033 28.5 10.0 94 184-288 36-133 (557)
202 PRK07798 acyl-CoA synthetase; 49.6 1.9E+02 0.0041 27.5 10.6 85 204-290 27-115 (533)
203 PRK08314 long-chain-fatty-acid 49.5 1E+02 0.0022 29.6 8.7 85 205-291 35-124 (546)
204 PRK15407 lipopolysaccharide bi 48.0 86 0.0019 29.5 7.6 56 80-139 107-167 (438)
205 COG2236 Predicted phosphoribos 47.9 32 0.0007 28.1 4.2 34 56-90 4-37 (192)
206 PF14552 Tautomerase_2: Tautom 47.9 33 0.00072 23.6 3.7 52 45-96 26-77 (82)
207 PRK08279 long-chain-acyl-CoA s 47.7 2E+02 0.0044 28.0 10.6 97 183-290 49-149 (600)
208 PRK06155 crotonobetaine/carnit 47.7 1.2E+02 0.0027 29.1 9.0 86 205-291 46-134 (542)
209 PLN02330 4-coumarate--CoA liga 47.6 1.3E+02 0.0028 29.0 9.1 99 183-289 40-141 (546)
210 PRK06702 O-acetylhomoserine am 47.5 1.1E+02 0.0025 28.6 8.2 57 81-139 97-155 (432)
211 PRK09162 hypoxanthine-guanine 47.3 59 0.0013 26.2 5.7 51 56-109 14-64 (181)
212 PRK11761 cysM cysteine synthas 47.1 2E+02 0.0044 25.3 10.7 90 46-139 27-117 (296)
213 cd01519 RHOD_HSP67B2 Member of 47.1 52 0.0011 23.4 4.9 52 58-110 37-92 (106)
214 TIGR03590 PseG pseudaminic aci 47.0 1.3E+02 0.0028 26.2 8.2 94 56-157 9-111 (279)
215 PRK13237 tyrosine phenol-lyase 47.0 1.5E+02 0.0032 28.1 8.8 70 57-131 76-174 (460)
216 PRK08043 bifunctional acyl-[ac 46.9 2.1E+02 0.0045 28.8 10.7 91 45-139 364-463 (718)
217 TIGR01217 ac_ac_CoA_syn acetoa 46.9 1.9E+02 0.004 28.8 10.2 93 186-284 99-195 (652)
218 PF05621 TniB: Bacterial TniB 46.7 64 0.0014 28.5 6.0 52 86-139 98-153 (302)
219 TIGR02316 propion_prpE propion 46.5 2.2E+02 0.0048 28.0 10.7 95 184-283 65-163 (628)
220 PRK05605 long-chain-fatty-acid 46.2 1.2E+02 0.0025 29.5 8.6 96 183-289 44-143 (573)
221 PRK07514 malonyl-CoA synthase; 46.0 1.4E+02 0.003 28.2 9.0 86 203-290 26-115 (504)
222 PF08734 GYD: GYD domain; Int 45.9 1E+02 0.0022 21.6 6.6 66 61-127 15-90 (91)
223 PRK12492 long-chain-fatty-acid 45.8 1.4E+02 0.0031 28.8 9.1 83 204-287 48-134 (562)
224 PRK07638 acyl-CoA synthetase; 45.7 1.2E+02 0.0025 28.6 8.4 83 57-144 161-244 (487)
225 PRK07008 long-chain-fatty-acid 45.5 1.5E+02 0.0032 28.5 9.2 82 57-140 194-276 (539)
226 PRK05850 acyl-CoA synthetase; 45.5 2.2E+02 0.0048 27.6 10.4 105 183-290 13-124 (578)
227 cd01449 TST_Repeat_2 Thiosulfa 45.3 45 0.00097 24.3 4.4 40 69-109 64-103 (118)
228 COG5012 Predicted cobalamin bi 45.1 79 0.0017 26.5 6.0 81 238-321 116-204 (227)
229 PRK08751 putative long-chain f 45.1 1.2E+02 0.0026 29.2 8.5 95 183-288 37-136 (560)
230 PRK10595 SOS cell division inh 45.0 79 0.0017 25.1 5.8 65 72-137 70-140 (164)
231 COG0031 CysK Cysteine synthase 44.6 2E+02 0.0044 25.4 8.8 60 79-139 56-116 (300)
232 TIGR01139 cysK cysteine syntha 44.4 2.2E+02 0.0047 25.0 9.3 92 45-140 20-112 (298)
233 PRK09088 acyl-CoA synthetase; 44.2 2E+02 0.0044 27.0 9.8 92 184-284 8-103 (488)
234 PRK13383 acyl-CoA synthetase; 44.2 1.5E+02 0.0032 28.2 8.9 84 205-290 60-147 (516)
235 PRK08162 acyl-CoA synthetase; 44.1 1.2E+02 0.0025 29.2 8.2 83 205-289 43-129 (545)
236 PLN02556 cysteine synthase/L-3 43.7 1.8E+02 0.0039 26.6 8.8 91 47-139 75-165 (368)
237 PRK13391 acyl-CoA synthetase; 43.4 2.6E+02 0.0056 26.5 10.4 98 184-289 10-110 (511)
238 PRK08276 long-chain-fatty-acid 42.6 1.7E+02 0.0038 27.6 9.1 83 205-289 11-97 (502)
239 TIGR02275 DHB_AMP_lig 2,3-dihy 42.5 2.7E+02 0.0059 26.5 10.4 93 45-142 182-284 (527)
240 PF13580 SIS_2: SIS domain; PD 42.2 62 0.0014 24.7 4.9 54 61-114 81-136 (138)
241 TIGR03443 alpha_am_amid L-amin 41.2 1.7E+02 0.0038 32.1 9.7 99 183-283 248-350 (1389)
242 PLN02620 indole-3-acetic acid- 41.0 18 0.00039 35.3 2.0 31 183-213 98-129 (612)
243 PRK10524 prpE propionyl-CoA sy 40.7 2.9E+02 0.0064 27.1 10.6 95 184-283 66-164 (629)
244 PLN02861 long-chain-fatty-acid 39.7 2.3E+02 0.005 28.2 9.7 87 204-291 76-165 (660)
245 PF06543 Lac_bphage_repr: Lact 39.6 26 0.00055 21.1 1.7 24 305-328 22-45 (49)
246 PLN02723 3-mercaptopyruvate su 39.5 52 0.0011 29.4 4.6 52 58-110 238-295 (320)
247 COG1167 ARO8 Transcriptional r 39.1 1.5E+02 0.0033 28.0 7.9 58 225-286 176-237 (459)
248 cd02070 corrinoid_protein_B12- 38.8 2.2E+02 0.0047 23.3 9.9 84 56-139 48-141 (201)
249 TIGR01796 CM_mono_aroH monofun 38.7 41 0.00088 24.9 3.1 56 59-114 13-71 (117)
250 PRK11493 sseA 3-mercaptopyruva 38.3 56 0.0012 28.5 4.6 52 58-110 201-257 (281)
251 TIGR00936 ahcY adenosylhomocys 37.8 2.3E+02 0.0051 26.3 8.6 59 81-139 29-89 (406)
252 PLN02238 hypoxanthine phosphor 37.4 98 0.0021 25.2 5.5 50 57-109 10-59 (189)
253 PF00464 SHMT: Serine hydroxym 37.3 2.7E+02 0.0058 25.9 8.8 116 81-208 107-245 (399)
254 PLN02614 long-chain acyl-CoA s 37.2 4.3E+02 0.0094 26.3 12.0 105 183-291 57-167 (666)
255 PRK08633 2-acyl-glycerophospho 36.9 2.9E+02 0.0064 29.4 10.5 94 45-142 781-883 (1146)
256 PLN02479 acetate-CoA ligase 36.8 4E+02 0.0086 25.8 10.8 95 183-287 32-129 (567)
257 COG1022 FAA1 Long-chain acyl-C 36.8 2.6E+02 0.0057 27.7 9.1 99 41-145 187-293 (613)
258 COG1064 AdhP Zn-dependent alco 36.8 1.1E+02 0.0023 27.7 6.0 60 75-139 159-218 (339)
259 KOG0331 ATP-dependent RNA heli 36.5 2.2E+02 0.0048 27.4 8.2 73 66-139 324-399 (519)
260 TIGR03595 Obg_CgtA_exten Obg f 36.0 37 0.0008 22.5 2.4 18 72-90 46-63 (69)
261 cd01979 Pchlide_reductase_N Pc 35.9 3.3E+02 0.0071 25.2 9.4 56 83-139 275-331 (396)
262 KOG1179 Very long-chain acyl-C 35.9 1.6E+02 0.0035 28.6 7.2 74 65-140 264-340 (649)
263 PRK06087 short chain acyl-CoA 35.3 4.1E+02 0.0088 25.4 10.8 89 45-138 186-283 (547)
264 PRK05852 acyl-CoA synthetase; 35.3 2.8E+02 0.0061 26.5 9.3 90 184-281 29-121 (534)
265 cd03466 Nitrogenase_NifN_2 Nit 35.2 1.9E+02 0.0042 27.0 7.9 56 83-139 299-358 (429)
266 PLN00011 cysteine synthase 34.9 3.3E+02 0.0072 24.3 9.1 91 47-140 33-124 (323)
267 PRK07867 acyl-CoA synthetase; 34.7 2.5E+02 0.0053 26.9 8.8 83 205-288 28-114 (529)
268 PF09269 DUF1967: Domain of un 34.7 41 0.00088 22.3 2.4 20 70-90 44-63 (69)
269 cd01976 Nitrogenase_MoFe_alpha 34.5 3.5E+02 0.0076 25.3 9.4 57 82-139 298-355 (421)
270 KOG0023 Alcohol dehydrogenase, 34.5 1.3E+02 0.0028 26.9 5.9 64 74-141 173-236 (360)
271 PLN02409 serine--glyoxylate am 34.2 2.2E+02 0.0048 26.2 8.1 9 82-90 82-90 (401)
272 cd02037 MRP-like MRP (Multiple 34.1 2.3E+02 0.005 22.2 8.4 86 28-118 14-103 (169)
273 PRK15423 hypoxanthine phosphor 33.8 1.4E+02 0.003 24.1 5.8 46 58-104 8-54 (178)
274 PRK05939 hypothetical protein; 33.7 2.2E+02 0.0048 26.3 7.9 57 81-139 83-139 (397)
275 TIGR01138 cysM cysteine syntha 33.7 3.3E+02 0.0071 23.9 9.3 92 45-139 22-113 (290)
276 PRK13390 acyl-CoA synthetase; 33.6 4.1E+02 0.009 25.0 10.6 93 184-284 10-105 (501)
277 PRK11121 nrdG anaerobic ribonu 33.6 41 0.00088 26.4 2.6 32 306-337 69-107 (154)
278 TIGR01284 alt_nitrog_alph nitr 33.5 3.5E+02 0.0076 25.6 9.3 57 83-139 324-381 (457)
279 PRK12406 long-chain-fatty-acid 33.0 2.5E+02 0.0055 26.5 8.5 84 205-290 11-98 (509)
280 PRK14185 bifunctional 5,10-met 32.8 3.3E+02 0.0073 24.0 8.3 78 62-139 11-97 (293)
281 cd00615 Orn_deC_like Ornithine 32.8 2.2E+02 0.0047 24.9 7.4 55 81-138 96-161 (294)
282 COG1167 ARO8 Transcriptional r 32.7 2.3E+02 0.0051 26.8 8.0 59 81-140 176-235 (459)
283 PRK05851 long-chain-fatty-acid 32.5 4.3E+02 0.0093 25.2 10.0 89 45-137 151-251 (525)
284 PF04122 CW_binding_2: Putativ 32.4 1.7E+02 0.0037 20.2 7.5 70 63-136 7-77 (92)
285 PLN02550 threonine dehydratase 32.3 4.2E+02 0.0091 26.1 9.6 90 46-141 124-213 (591)
286 KOG0025 Zn2+-binding dehydroge 32.0 1.7E+02 0.0037 25.9 6.1 64 80-143 157-221 (354)
287 TIGR01203 HGPRTase hypoxanthin 31.8 1.5E+02 0.0033 23.5 5.7 20 59-78 3-22 (166)
288 TIGR00623 sula cell division i 31.8 1.4E+02 0.003 23.9 5.3 42 72-114 74-115 (168)
289 PRK13849 putative crown gall t 31.8 1.9E+02 0.004 24.4 6.5 86 28-118 16-117 (231)
290 TIGR01734 D-ala-DACP-lig D-ala 31.6 4E+02 0.0087 25.0 9.7 81 57-141 159-242 (502)
291 cd06451 AGAT_like Alanine-glyo 31.5 2.7E+02 0.0058 24.9 8.1 55 82-137 72-130 (356)
292 cd01967 Nitrogenase_MoFe_alpha 31.4 3.4E+02 0.0075 25.0 8.9 36 81-117 283-318 (406)
293 TIGR01137 cysta_beta cystathio 31.0 3.7E+02 0.008 25.2 9.1 91 46-139 26-116 (454)
294 cd01448 TST_Repeat_1 Thiosulfa 30.9 1.5E+02 0.0033 21.6 5.4 41 69-110 65-106 (122)
295 PRK05205 bifunctional pyrimidi 30.9 1.6E+02 0.0035 23.5 5.8 46 57-104 5-51 (176)
296 PRK08574 cystathionine gamma-s 30.8 2.4E+02 0.0051 26.0 7.6 57 81-139 89-145 (385)
297 PRK14807 histidinol-phosphate 30.6 3.2E+02 0.007 24.5 8.4 55 81-138 97-155 (351)
298 cd02071 MM_CoA_mut_B12_BD meth 30.5 2.3E+02 0.0049 21.0 9.4 83 238-325 11-101 (122)
299 PRK06178 acyl-CoA synthetase; 30.3 2.9E+02 0.0063 26.6 8.6 85 205-291 58-146 (567)
300 PRK06018 putative acyl-CoA syn 30.3 2.5E+02 0.0055 26.9 8.1 84 204-289 38-125 (542)
301 PRK09177 xanthine-guanine phos 29.8 1.8E+02 0.0039 22.8 5.7 36 57-95 8-43 (156)
302 TIGR03201 dearomat_had 6-hydro 29.6 2.5E+02 0.0054 25.2 7.5 58 75-137 159-216 (349)
303 PF02729 OTCace_N: Aspartate/o 29.3 2.7E+02 0.0058 21.5 9.0 77 63-140 16-103 (142)
304 PF00156 Pribosyltran: Phospho 29.2 1.7E+02 0.0037 21.4 5.4 27 58-85 4-30 (125)
305 cd07100 ALDH_SSADH1_GabD1 Myco 29.2 4.2E+02 0.0091 24.7 9.1 48 227-274 96-149 (429)
306 PRK09331 Sep-tRNA:Cys-tRNA syn 29.1 3.1E+02 0.0068 25.0 8.1 56 81-139 99-166 (387)
307 TIGR01285 nifN nitrogenase mol 29.0 3.4E+02 0.0074 25.5 8.4 57 83-140 310-382 (432)
308 TIGR01278 DPOR_BchB light-inde 28.8 1.7E+02 0.0036 28.2 6.4 56 83-138 294-351 (511)
309 COG4009 Uncharacterized protei 28.7 1.9E+02 0.0042 19.7 5.7 66 57-134 8-76 (88)
310 COG0365 Acs Acyl-coenzyme A sy 28.7 3.5E+02 0.0076 26.2 8.4 97 189-290 27-127 (528)
311 cd06448 L-Ser-dehyd Serine deh 28.5 4.2E+02 0.0092 23.5 9.6 91 46-140 16-106 (316)
312 PRK08974 long-chain-fatty-acid 28.4 2.4E+02 0.0053 27.1 7.6 82 205-287 48-133 (560)
313 PRK10717 cysteine synthase A; 28.0 4.4E+02 0.0095 23.5 10.8 93 45-140 27-119 (330)
314 PRK10252 entF enterobactin syn 27.9 5.5E+02 0.012 27.9 10.9 92 45-140 597-698 (1296)
315 PRK04914 ATP-dependent helicas 27.8 3.6E+02 0.0078 28.4 8.8 71 66-140 479-555 (956)
316 PRK07787 acyl-CoA synthetase; 27.7 5.1E+02 0.011 24.2 10.5 90 45-140 127-225 (471)
317 cd07050 BMC_EutL_repeat2 ethan 27.7 1E+02 0.0022 21.1 3.3 41 72-112 3-43 (87)
318 PRK06814 acylglycerophosphoeth 27.7 5.8E+02 0.013 27.3 10.8 92 45-140 792-892 (1140)
319 PRK10946 entE enterobactin syn 27.6 5.3E+02 0.012 24.6 9.8 91 45-140 181-281 (536)
320 PLN03154 putative allyl alcoho 27.5 3.1E+02 0.0066 24.7 7.7 56 79-137 154-210 (348)
321 PF01297 TroA: Periplasmic sol 27.4 1.3E+02 0.0027 25.7 4.9 80 62-143 128-211 (256)
322 PRK04870 histidinol-phosphate 27.2 3.8E+02 0.0082 24.0 8.3 54 82-138 103-160 (356)
323 cd01974 Nitrogenase_MoFe_beta 27.1 3.2E+02 0.0068 25.7 7.8 47 82-129 301-351 (435)
324 PRK10287 thiosulfate:cyanide s 27.0 2.4E+02 0.0053 20.3 5.7 48 57-112 41-88 (104)
325 PTZ00271 hypoxanthine-guanine 27.0 1.7E+02 0.0038 24.3 5.4 49 57-105 26-78 (211)
326 PLN00020 ribulose bisphosphate 26.8 4.5E+02 0.0098 24.4 8.2 73 67-139 131-220 (413)
327 smart00450 RHOD Rhodanese Homo 26.7 2.1E+02 0.0045 19.4 5.3 40 70-110 43-82 (100)
328 PRK13382 acyl-CoA synthetase; 26.7 5E+02 0.011 24.8 9.4 83 205-289 68-154 (537)
329 COG4821 Uncharacterized protei 26.6 1E+02 0.0022 25.4 3.8 54 65-139 86-139 (243)
330 PRK11070 ssDNA exonuclease Rec 26.6 3.7E+02 0.008 26.4 8.3 94 58-158 49-160 (575)
331 PF03702 UPF0075: Uncharacteri 26.4 45 0.00098 30.4 2.0 36 304-339 286-321 (364)
332 PRK12582 acyl-CoA synthetase; 26.3 2.8E+02 0.006 27.3 7.7 96 183-283 61-165 (624)
333 PLN02419 methylmalonate-semial 26.0 5.7E+02 0.012 25.3 9.5 67 226-292 248-325 (604)
334 cd02067 B12-binding B12 bindin 25.8 2.7E+02 0.0058 20.3 7.1 36 104-139 23-58 (119)
335 PRK06060 acyl-CoA synthetase; 25.7 3.8E+02 0.0082 26.9 8.6 92 184-287 19-114 (705)
336 PF05221 AdoHcyase: S-adenosyl 25.6 4E+02 0.0087 23.1 7.3 61 80-140 39-101 (268)
337 PTZ00397 macrophage migration 25.6 1.7E+02 0.0037 21.4 4.7 40 57-96 67-106 (116)
338 cd02071 MM_CoA_mut_B12_BD meth 25.3 2.8E+02 0.0062 20.4 6.7 38 102-139 21-58 (122)
339 TIGR02822 adh_fam_2 zinc-bindi 25.2 2.8E+02 0.0061 24.6 7.0 57 75-136 158-214 (329)
340 PTZ00216 acyl-CoA synthetase; 25.1 5.2E+02 0.011 25.9 9.4 88 202-291 118-209 (700)
341 PRK07786 long-chain-fatty-acid 25.0 4.4E+02 0.0095 25.2 8.7 82 205-288 42-127 (542)
342 PLN02723 3-mercaptopyruvate su 24.8 1.7E+02 0.0037 26.1 5.4 49 69-118 89-139 (320)
343 PRK07768 long-chain-fatty-acid 24.8 6.1E+02 0.013 24.2 9.7 90 45-138 151-253 (545)
344 PRK07503 methionine gamma-lyas 24.8 3.7E+02 0.008 24.9 7.8 55 81-138 101-157 (403)
345 PRK06381 threonine synthase; V 24.7 2.1E+02 0.0047 25.3 6.0 88 46-140 31-118 (319)
346 cd01016 TroA Metal binding pro 24.7 2.4E+02 0.0051 24.6 6.1 82 62-143 137-222 (276)
347 TIGR02080 O_succ_thio_ly O-suc 24.6 3.6E+02 0.0078 24.7 7.6 55 81-138 87-143 (382)
348 PRK09192 acyl-CoA synthetase; 24.4 5.7E+02 0.012 24.8 9.4 85 204-290 48-143 (579)
349 cd00640 Trp-synth-beta_II Tryp 24.3 4.3E+02 0.0093 22.2 8.9 92 45-140 14-105 (244)
350 cd07139 ALDH_AldA-Rv0768 Mycob 24.2 6.1E+02 0.013 24.0 9.4 48 227-274 137-190 (471)
351 PRK11493 sseA 3-mercaptopyruva 24.2 1.9E+02 0.004 25.2 5.4 49 67-116 71-121 (281)
352 PRK07239 bifunctional uroporph 24.1 1.8E+02 0.0039 26.6 5.6 39 85-129 99-137 (381)
353 COG0436 Aspartate/tyrosine/aro 23.9 1.5E+02 0.0033 27.3 5.0 21 196-216 239-260 (393)
354 COG1184 GCD2 Translation initi 23.8 5.2E+02 0.011 22.9 9.0 60 80-140 116-179 (301)
355 PF00455 DeoRC: DeoR C termina 23.8 1.6E+02 0.0035 23.1 4.5 54 252-314 19-73 (161)
356 PRK09029 O-succinylbenzoic aci 23.7 3.9E+02 0.0085 24.8 7.9 79 204-283 27-108 (458)
357 PRK14119 gpmA phosphoglyceromu 23.3 1.7E+02 0.0037 24.5 4.9 36 59-95 150-185 (228)
358 PRK02910 light-independent pro 23.2 2.9E+02 0.0063 26.7 6.9 57 83-139 292-350 (519)
359 TIGR02370 pyl_corrinoid methyl 23.2 4.2E+02 0.009 21.7 10.1 55 85-139 85-143 (197)
360 PRK09224 threonine dehydratase 23.2 4.6E+02 0.01 25.2 8.2 91 45-141 34-124 (504)
361 PRK12483 threonine dehydratase 23.2 6E+02 0.013 24.6 8.9 90 46-141 52-141 (521)
362 cd08294 leukotriene_B4_DH_like 23.1 3.8E+02 0.0082 23.4 7.4 56 79-137 139-194 (329)
363 PRK04837 ATP-dependent RNA hel 23.1 6.1E+02 0.013 23.5 11.0 79 59-141 234-315 (423)
364 PRK06234 methionine gamma-lyas 23.0 4.8E+02 0.01 24.1 8.2 56 81-138 100-156 (400)
365 PRK09629 bifunctional thiosulf 23.0 1.5E+02 0.0033 29.2 5.0 41 69-110 209-249 (610)
366 TIGR03208 cyc_hxne_CoA_lg cycl 22.9 6.7E+02 0.014 23.9 10.6 91 45-140 194-293 (538)
367 PRK12476 putative fatty-acid-- 22.9 7.2E+02 0.016 24.3 11.6 103 184-289 47-156 (612)
368 PRK04813 D-alanine--poly(phosp 22.8 3.4E+02 0.0073 25.5 7.4 78 205-283 27-107 (503)
369 KOG0257 Kynurenine aminotransf 22.8 3.1E+02 0.0066 25.5 6.4 80 56-138 66-145 (420)
370 PLN02356 phosphateglycerate ki 22.8 5.3E+02 0.012 24.2 8.2 91 46-139 68-158 (423)
371 COG1611 Predicted Rossmann fol 22.7 3.7E+02 0.0079 22.3 6.5 70 46-122 15-84 (205)
372 COG2897 SseA Rhodanese-related 22.6 1.8E+02 0.004 25.5 4.9 56 57-112 202-262 (285)
373 PRK06710 long-chain-fatty-acid 22.4 3.4E+02 0.0075 26.1 7.5 82 205-287 49-133 (563)
374 PF08479 POTRA_2: POTRA domain 22.3 1.2E+02 0.0027 20.1 3.2 26 55-81 27-52 (76)
375 PHA02518 ParA-like protein; Pr 22.3 2.3E+02 0.0049 23.0 5.4 85 28-118 15-110 (211)
376 cd02185 AroH Chorismate mutase 22.2 1.1E+02 0.0024 22.7 3.0 55 60-114 14-71 (117)
377 PF08845 SymE_toxin: Toxin Sym 22.2 99 0.0021 19.6 2.4 22 72-94 30-51 (57)
378 PLN02430 long-chain-fatty-acid 22.2 7.9E+02 0.017 24.5 11.8 103 184-290 55-163 (660)
379 TIGR02372 4_coum_CoA_lig 4-cou 22.1 6.2E+02 0.013 23.2 9.8 107 28-142 80-195 (386)
380 PRK09422 ethanol-active dehydr 22.0 3.4E+02 0.0074 23.9 6.9 56 79-137 158-213 (338)
381 CHL00076 chlB photochlorophyll 21.9 3.9E+02 0.0085 25.8 7.5 56 83-138 304-361 (513)
382 TIGR00649 MG423 conserved hypo 21.9 3.5E+02 0.0076 25.2 7.1 62 79-140 314-384 (422)
383 TIGR01127 ilvA_1Cterm threonin 21.9 5.2E+02 0.011 23.6 8.1 90 45-140 14-103 (380)
384 cd07109 ALDH_AAS00426 Uncharac 21.8 6.7E+02 0.015 23.5 10.1 48 227-274 117-170 (454)
385 TIGR03877 thermo_KaiC_1 KaiC d 21.7 2.5E+02 0.0053 23.7 5.6 54 79-132 16-73 (237)
386 TIGR01124 ilvA_2Cterm threonin 21.5 5.1E+02 0.011 24.9 8.1 91 45-141 31-121 (499)
387 PRK08134 O-acetylhomoserine am 21.4 4.6E+02 0.01 24.6 7.7 33 104-138 124-156 (433)
388 cd07105 ALDH_SaliADH Salicylal 21.4 6.7E+02 0.015 23.4 8.9 49 226-274 97-151 (432)
389 PRK07476 eutB threonine dehydr 21.4 5.1E+02 0.011 23.0 7.8 51 90-140 72-122 (322)
390 PTZ00149 hypoxanthine phosphor 21.3 3.2E+02 0.0069 23.4 6.0 38 57-96 56-93 (241)
391 cd02069 methionine_synthase_B1 21.2 4.8E+02 0.01 21.7 10.5 83 56-139 52-147 (213)
392 TIGR02618 tyr_phenol_ly tyrosi 21.1 4.3E+02 0.0093 25.0 7.3 69 56-130 68-166 (450)
393 PRK07050 cystathionine beta-ly 21.0 5.1E+02 0.011 23.9 7.9 22 199-220 218-240 (394)
394 PRK13690 hypothetical protein; 21.0 1.9E+02 0.0041 23.2 4.2 35 60-94 2-36 (184)
395 PRK07769 long-chain-fatty-acid 20.9 8E+02 0.017 24.1 11.8 103 184-289 34-143 (631)
396 TIGR01862 N2-ase-Ialpha nitrog 20.9 7.1E+02 0.015 23.4 9.4 57 83-139 316-373 (443)
397 cd00401 AdoHcyase S-adenosyl-L 20.8 7E+02 0.015 23.3 8.6 67 72-139 25-93 (413)
398 PF07722 Peptidase_C26: Peptid 20.6 91 0.002 26.0 2.6 36 101-138 30-65 (217)
399 PRK06437 hypothetical protein; 20.5 2.3E+02 0.005 18.4 4.0 49 21-92 15-63 (67)
400 TIGR02825 B4_12hDH leukotriene 20.5 4.5E+02 0.0098 23.0 7.3 56 79-138 134-190 (325)
401 cd06451 AGAT_like Alanine-glyo 20.5 6.1E+02 0.013 22.5 8.5 77 61-138 27-104 (356)
402 PF00667 FAD_binding_1: FAD bi 20.4 99 0.0021 25.8 2.8 30 79-108 40-69 (219)
403 cd01561 CBS_like CBS_like: Thi 20.3 5.8E+02 0.013 22.2 8.8 93 45-141 16-109 (291)
404 TIGR01286 nifK nitrogenase mol 20.2 4.7E+02 0.01 25.3 7.6 47 83-130 362-412 (515)
405 cd02042 ParA ParA and ParB of 20.2 3.2E+02 0.0068 19.1 5.7 34 84-118 40-73 (104)
406 cd01968 Nitrogenase_NifE_I Nit 20.0 7E+02 0.015 23.1 8.7 56 83-139 286-342 (410)
No 1
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=7.9e-46 Score=323.03 Aligned_cols=313 Identities=18% Similarity=0.199 Sum_probs=260.3
Q ss_pred CCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch
Q 045351 17 LRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR 96 (349)
Q Consensus 17 ~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~ 96 (349)
....+++.. .|+.+.+...+ +.. ||+.|++....+.++||++|.+.++++|+.|.. +|+++||||++..||+.+
T Consensus 41 g~~~ipl~~--~Tigq~l~~~t--~~v-~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~ 114 (596)
T KOG1177|consen 41 GCSQIPLDS--ETIGQLLETTT--ERV-PDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYE 114 (596)
T ss_pred CCCCCCccc--ccHHHHHHHHh--hcc-CcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHH
Confidence 334444544 89999999999 999 999999988778889999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc-----ccc---------------c---Ccc-e
Q 045351 97 VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK-----IPQ---------------L---KYG-T 152 (349)
Q Consensus 97 ~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~---------------~---~~~-~ 152 (349)
|+++.+||.++|.+.+++||.+..+++++.+++.+.+++|+...+... +.+ . ... +
T Consensus 115 w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthv 194 (596)
T KOG1177|consen 115 WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHV 194 (596)
T ss_pred HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEE
Confidence 999999999999999999999999999999999999999998643211 111 0 011 2
Q ss_pred EEeCCCC-------ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCC
Q 045351 153 VLLDSPE-------FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAAR 225 (349)
Q Consensus 153 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 225 (349)
+..+.+. +.+++...... .-...........||+.+-|.|||||||.|||+.+||.|++++........+ +
T Consensus 195 i~~~ed~~~~Ga~~~sev~~~~s~~-~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g-~ 272 (596)
T KOG1177|consen 195 ILADEDHPLPGAFLLSEVLKAASKE-ERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG-Y 272 (596)
T ss_pred EecCCCCcCCCceehHHHHHhcchH-HHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC-c
Confidence 2222110 11111111000 0011122334667899999999999999999999999999999999888888 6
Q ss_pred CCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcc
Q 045351 226 SRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSS 303 (349)
Q Consensus 226 ~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~ 303 (349)
.++.++++..|+||.+|. .+++.+|..|+++|++ +.|++...+++|.++++|.++++|+++..|++.+ ....+++++
T Consensus 273 ~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~-~~~~~~~s~ 351 (596)
T KOG1177|consen 273 NEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIP-QKQQVDLSS 351 (596)
T ss_pred CcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcch-hhccCchhh
Confidence 888899999999999997 8999999999999997 5799999999999999999999999999999999 999999999
Q ss_pred hheehccCCCCCHHHHHHHHHHc---CCcccccccccC
Q 045351 304 IEVVASGGAHLTLSVIRKYLQLN---RTVNRQLCLEFG 338 (349)
Q Consensus 304 lr~i~~gG~~l~~~~~~~~~~~~---~~~~~~~~~~~G 338 (349)
+|.++.||+++++++++.+.+.. +....|+.||++
T Consensus 352 lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts 389 (596)
T KOG1177|consen 352 LRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETS 389 (596)
T ss_pred hhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccC
Confidence 99999999999999999999955 445556778875
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=7.2e-44 Score=328.43 Aligned_cols=307 Identities=20% Similarity=0.224 Sum_probs=246.6
Q ss_pred cchhhh-hhcccCCCCCCCCCeEEEeCCC---CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSY-VFSLLESHAPPPDTTALIDTAS---RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~-l~~~~~~~~~~~~~~ai~~~~~---~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.|+... ++... .... ++++|+++..+ .+.+||+||.+.++++|+.|++..|+ +||||++++|+.+|.++++||
T Consensus 8 lN~~~n~~dr~~-~~~~-~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA 84 (528)
T COG0365 8 LNLALNALDRHL-EADR-PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLA 84 (528)
T ss_pred eechhhhhhhhh-hccC-CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHH
Confidence 444433 44443 1234 78999998633 27899999999999999999864678 999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcc---------eEEeCCCC--ccccccccCCCCC
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYG---------TVLLDSPE--FEPLSATDSLDYY 172 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~ 172 (349)
|+++|++++|+.+..+.+++...+++++++++++++......+..... +++.+... +.+....
T Consensus 85 ~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~------ 158 (528)
T COG0365 85 TARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEK------ 158 (528)
T ss_pred HHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhc------
Confidence 999999999999999999999999999999999998766554431110 22222211 1111111
Q ss_pred CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhh
Q 045351 173 DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLG 251 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~ 251 (349)
............+|+++|+|||||||.||||+++|..++............+.++|++++..++.|++|. ..++.+|.
T Consensus 159 -~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~ 237 (528)
T COG0365 159 -ASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLA 237 (528)
T ss_pred -cCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHh
Confidence 1112223348889999999999999999999999998888776655433336799999999999999999 56899999
Q ss_pred cCCEEEEcCC--C-CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC-
Q 045351 252 MGESLVCMGK--F-DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR- 327 (349)
Q Consensus 252 ~G~~~v~~~~--~-~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~- 327 (349)
+|+++++.+. + ++..+++.|+++++|.++++|+.++.|.+.. ..+++++++||.+.++||||+++.++++.+.++
T Consensus 238 ~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g-~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~ 316 (528)
T COG0365 238 SGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLG-LGEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGV 316 (528)
T ss_pred cCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcC-CcccccchhheeeeccCCCCCHHHHHHHHHHhCC
Confidence 9999999852 3 4999999999999999999999999999997 578899999999999999999999999999974
Q ss_pred -CcccccccccCceeeecC
Q 045351 328 -TVNRQLCLEFGAPIISLS 345 (349)
Q Consensus 328 -~~~~~~~~~~G~~~i~~~ 345 (349)
....++.||+|++++.-.
T Consensus 317 ~i~d~~gqTEtg~~~~~~~ 335 (528)
T COG0365 317 WILDIYGQTETGMGFIAGR 335 (528)
T ss_pred CEeccccccccCccccCCC
Confidence 456677899986655443
No 3
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=319.86 Aligned_cols=292 Identities=33% Similarity=0.458 Sum_probs=238.4
Q ss_pred eEEEeCC-CCceeeHHHHHHHHHHHHHHHhhhcC--CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 48 TALIDTA-SRHRILYPDLTLRIKTLAYSLKTKYK--LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 48 ~ai~~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~g--~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+.+++.. .|+.+||.|+++++.++|..|.+ +| +++||+|++++||++++.++++||+++|++..++||.....++.
T Consensus 34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~ 112 (537)
T KOG1176|consen 34 TSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIA 112 (537)
T ss_pred ceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHH
Confidence 6777653 26999999999999999999997 65 89999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCeEEEEcCccccccccc----CcceEEeCCC----CccccccccC--CCCCCCCccccccccCCCCcEEEEec
Q 045351 125 RQIHLSKPVIAFATHDTAHKIPQL----KYGTVLLDSP----EFEPLSATDS--LDYYDDDEERVRVSVSLSDPAAILYS 194 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~T 194 (349)
+.++.++++++|++.+..+++.+. ...++++... ...+...... ..+..............+|++.|+||
T Consensus 113 ~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~il~S 192 (537)
T KOG1176|consen 113 KQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPVSEDDTAAILYS 192 (537)
T ss_pred HHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccCCCCCeEEEecC
Confidence 999999999999999888776542 2555555543 1111111111 00000111111445677999999999
Q ss_pred cCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHh-hhhcCCEEEEcCCCCHHHHHHHHHh
Q 045351 195 SGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLR-SLGMGESLVCMGKFDFGRMLKAVEE 273 (349)
Q Consensus 195 SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~-~l~~G~~~v~~~~~~~~~~~~~i~~ 273 (349)
|||||.||||++||+++..+.......+. +...++.++.+|++|.+|+...+. .+..|+++++...|++..+++.+++
T Consensus 193 SGTTg~PKgV~lsHr~~~~~~~~~~~~~~-~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~k 271 (537)
T KOG1176|consen 193 SGTTGLPKGVVLSHRNLIANTLSIKIGWE-LTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEK 271 (537)
T ss_pred CCCCCCCceEEEecHHHHHHHHHhhhccc-CCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHH
Confidence 99999999999999999999887776666 677999999999999999977776 5555666666678899999999999
Q ss_pred hcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcc---cccccccCceee
Q 045351 274 FRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVN---RQLCLEFGAPII 342 (349)
Q Consensus 274 ~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~---~~~~~~~G~~~i 342 (349)
|++|++.++|.++..|++.+ ...+++++++|.+.+||+++++++.+++.+++|... -|++||.|+.+.
T Consensus 272 ykvt~~~~vP~~~~~l~~~p-~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~ 342 (537)
T KOG1176|consen 272 YKVTHLFLVPPVLNMLAKSP-IVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLIT 342 (537)
T ss_pred hCEEEEEcChHHHHHHhcCC-ccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCcee
Confidence 99999999999999999998 888899999999999999999999999999998332 245566664433
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.1e-42 Score=325.91 Aligned_cols=304 Identities=27% Similarity=0.353 Sum_probs=247.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.+...+ ..+ |+++|+++.+.+.++||+||.++++++|+.|++ .|+++||+|+|+++|+++++++++||+++
T Consensus 11 ~~~~~~l~~~a--~~~-~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 11 LTLASLLERAA--RRN-PDRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccHHHHHHHHH--HhC-CCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 78999999999 999 999999997323349999999999999999999 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC----cc-eEEeC-CCC------ccccccccCCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK----YG-TVLLD-SPE------FEPLSATDSLDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~----~~-~~~~~-~~~------~~~~~~~~~~~~~~~~ 175 (349)
|++++|++|..+.+++.++++.++++.++++..+.+...... .. .+... ... +....... ..
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 160 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEG------PG 160 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhcc------CC
Confidence 999999999999999999999999999999987333322211 11 11111 111 11111100 00
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccC-CCCCcEEEEecChhhHhhHH-HHHhhhhcC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAA-RSRPAVVLCTVPYFHSYGFT-CCLRSLGMG 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G 253 (349)
.........++++++|+|||||||.||||++||+|+..+.......+.. +.++|++++++|++|.+|+. .++..++.|
T Consensus 161 ~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G 240 (534)
T COG0318 161 PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGG 240 (534)
T ss_pred cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcC
Confidence 1111112678999999999999999999999999999998887777663 57889999999999999995 455569999
Q ss_pred CEEEEcC--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcc-hheehccCCCCCHHHHHHHHHHcCCc-
Q 045351 254 ESLVCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSS-IEVVASGGAHLTLSVIRKYLQLNRTV- 329 (349)
Q Consensus 254 ~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~-lr~i~~gG~~l~~~~~~~~~~~~~~~- 329 (349)
+++++.+ .|++..++..+.++++|++.++|+++..|+..+ .....++++ +|.+++||+++++++++++.++|+..
T Consensus 241 ~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~-~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~ 319 (534)
T COG0318 241 GTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNP-EKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIA 319 (534)
T ss_pred CEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCC-ccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCc
Confidence 9999997 699999999999999999999999999999987 666666665 99999999999999999999999743
Q ss_pred --ccccccccCceee
Q 045351 330 --NRQLCLEFGAPII 342 (349)
Q Consensus 330 --~~~~~~~~G~~~i 342 (349)
..|++||....++
T Consensus 320 i~~~YG~TE~~~~~~ 334 (534)
T COG0318 320 ILEGYGLTETSPVVT 334 (534)
T ss_pred eEEeecccccCceee
Confidence 4455666644333
No 5
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-41 Score=325.29 Aligned_cols=294 Identities=19% Similarity=0.233 Sum_probs=246.1
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
++.+++...+ +.+ |+++|++++ ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|
T Consensus 50 ~~~~~~~~~a--~~~-pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~G 123 (549)
T PRK07788 50 PFAGLVAHAA--RRA-PDRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGKVG 123 (549)
T ss_pred hHHHHHHHHH--HHC-CCceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 7899999999 999 999999987 7899999999999999999998 999999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----CcceEEeCCCC----------ccccccccCCCCCC
Q 045351 109 VVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYGTVLLDSPE----------FEPLSATDSLDYYD 173 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~~~ 173 (349)
++++|+++..+.+++.++++.+++++++++++....+... ....+...... +.++...
T Consensus 124 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 196 (549)
T PRK07788 124 ARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAG------- 196 (549)
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcC-------
Confidence 9999999999999999999999999999998765544321 11121111100 1111100
Q ss_pred CCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcC
Q 045351 174 DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMG 253 (349)
Q Consensus 174 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G 253 (349)
..........++.++++|||||||.||+|.++|+++...+......++ +..+++++...|++|.+|+...+.++..|
T Consensus 197 --~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~g~~~~~~~l~~G 273 (549)
T PRK07788 197 --SSTAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVP-FRAGETTLLPAPMFHATGWAHLTLAMALG 273 (549)
T ss_pred --CCCCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCC-CCcCCeEEEccchHHHHHHHHHHHHHHhC
Confidence 001111234567899999999999999999999999998887777777 68899999999999999998788899999
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC--CCCCCcchheehccCCCCCHHHHHHHHHHcCC--c
Q 045351 254 ESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM--DGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--V 329 (349)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~ 329 (349)
+++++...+++..+++.++++++|++.++|.+++.|++.. .. ...++++||.+++||+++++++++++.+.++. .
T Consensus 274 ~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 352 (549)
T PRK07788 274 STVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLG-PEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLY 352 (549)
T ss_pred CEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCc-ccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccce
Confidence 9999998899999999999999999999999999999875 43 56678999999999999999999999998853 3
Q ss_pred ccccccccCc
Q 045351 330 NRQLCLEFGA 339 (349)
Q Consensus 330 ~~~~~~~~G~ 339 (349)
+.|+.+|.|.
T Consensus 353 ~~YG~TE~~~ 362 (549)
T PRK07788 353 NLYGSTEVAF 362 (549)
T ss_pred eccCcchhch
Confidence 4455666553
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-41 Score=329.59 Aligned_cols=306 Identities=18% Similarity=0.195 Sum_probs=236.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCC---ceeeHHHHHHHHHHHHHHHhhhc---CCCCC-----------CEEEEE
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASR---HRILYPDLTLRIKTLAYSLKTKY---KLSKY-----------DVAFLL 90 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~---~~~Ty~~l~~~~~~~a~~L~~~~---g~~~g-----------d~V~i~ 90 (349)
.|+.++|...+ +.+ |+++|+++...+ +++||+|+.+++.++|+.|.+ + |+++| |+|+|+
T Consensus 61 ~~l~~~l~~~~--~~~-p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~-~~~~Gv~~g~~~~~~~~g~~d~V~i~ 136 (746)
T PTZ00342 61 KHIMKLLLEKY--KLN-NNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNT-YEGKGIPEKKYNEEQNNGKFKLLGLY 136 (746)
T ss_pred chHHHHHHHHH--hhc-CCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHH-HhhcCCCcCccccccccccccEEEEE
Confidence 79999999999 999 999999874223 789999999999999999996 5 99999 999999
Q ss_pred cCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-Cc-ceEEeCCCCcc---
Q 045351 91 SQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KY-GTVLLDSPEFE--- 161 (349)
Q Consensus 91 ~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~-~~~~~~~~~~~--- 161 (349)
++|+++|+++.+||+++|++.+|+++.++.+++.++++.+++++++++.+..+.+.. . .. .+++++.....
T Consensus 137 ~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 216 (746)
T PTZ00342 137 GSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEI 216 (746)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccc
Confidence 999999999999999999999999999999999999999999999998765544332 1 11 24444431100
Q ss_pred ----------------c-------------------------------------cccccCC------CCCC----CCccc
Q 045351 162 ----------------P-------------------------------------LSATDSL------DYYD----DDEER 178 (349)
Q Consensus 162 ----------------~-------------------------------------~~~~~~~------~~~~----~~~~~ 178 (349)
. +...... .+.+ .....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (746)
T PTZ00342 217 NINKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNY 296 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCC
Confidence 0 0000000 0000 00000
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc-CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEE
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA-ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v 257 (349)
......+++++.|+|||||||.||||++||+|+++.+........ ...+.+++++.+|++|++++...+.+++.|++++
T Consensus 297 ~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 297 KIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEE
Confidence 112456799999999999999999999999999998866543211 0235689999999999999977788999999999
Q ss_pred EcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhc--------CCCCCC-------------------------------
Q 045351 258 CMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARD--------GGTMDG------------------------------- 298 (349)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~--------~~~~~~------------------------------- 298 (349)
+.+. ++..+++.|+++++|+++++|.++++|... + ..++
T Consensus 377 ~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 377 IWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLP-PLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 9865 899999999999999999999999998752 1 1000
Q ss_pred ---CCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 299 ---YDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 299 ---~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
.-.++||.+++||+++++++.++|...++ ..+.|++||.++
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~ 500 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTG 500 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccc
Confidence 00268999999999999999999998874 334456677654
No 7
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=4.4e-41 Score=323.20 Aligned_cols=304 Identities=20% Similarity=0.234 Sum_probs=244.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|.+.+ .++ |+++|++++ ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 7 ~~~~~~~~~~~--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 7 AHICQCLTRLA--TLR-GNAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred hHHHHHHHHHH--Hhc-CCceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 68999999999 999 999999986 7899999999999999999999 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc-----c-Ccc-eEEeCCCC------ccccccccCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ-----L-KYG-TVLLDSPE------FEPLSATDSLDYYDD 174 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-----~-~~~-~~~~~~~~------~~~~~~~~~~~~~~~ 174 (349)
|++++|+++..+.+++.++++.++++++++++........ . ... .+..+... +.+.....+......
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRAL 160 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCcc
Confidence 9999999999999999999999999999998754221111 0 111 11222111 001110000000000
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCC
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGE 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~ 254 (349)
..........++++++|+|||||||.||||+++|+++..+.......++ +.++++++...|++|.+|+...+.++..|+
T Consensus 161 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~ 239 (563)
T PLN02860 161 GTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVG-YGEDDVYLHTAPLCHIGGLSSALAMLMVGA 239 (563)
T ss_pred ccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcC-CCCCCEEEEecCchhhccHHHHHHHHHcCc
Confidence 0001112346789999999999999999999999999987776666666 688999999999999999988899999999
Q ss_pred EEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC--CCCCCcchheehccCCCCCHHHHHHHHHHcCCc---
Q 045351 255 SLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM--DGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV--- 329 (349)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~--- 329 (349)
++++.+++++..+++.|+++++|++.++|.++..|.+.. .. ....+++||.+++||+++++++.+++.+.|++.
T Consensus 240 ~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~ 318 (563)
T PLN02860 240 CHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLT-RKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLF 318 (563)
T ss_pred eEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhh-hhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCcee
Confidence 999999999999999999999999999999999998764 22 234578999999999999999999999998643
Q ss_pred ccccccccCc
Q 045351 330 NRQLCLEFGA 339 (349)
Q Consensus 330 ~~~~~~~~G~ 339 (349)
+.|+++|.|.
T Consensus 319 ~~YG~TE~~~ 328 (563)
T PLN02860 319 SAYGMTEACS 328 (563)
T ss_pred cCCCccccCc
Confidence 3355666653
No 8
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.6e-40 Score=317.59 Aligned_cols=322 Identities=30% Similarity=0.448 Sum_probs=250.8
Q ss_pred CCccccceeeccCCCCCCCCC-CCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCC
Q 045351 5 NGFCSETKIFHSLRPSIAFPP-ETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSK 83 (349)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~ 83 (349)
..++++++.+.++.+..++|. ++.++.+.+.... .+ |+++|+++...+..+||+||.++++++|+.|.++.|+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~ 91 (560)
T PLN02574 16 FWYSPETGIYSSKHPPVPLPSDPNLDAVSFIFSHH---NH-NGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQ 91 (560)
T ss_pred cccCcCCeeecCCCCCCCCCCCCCCCHHHHHhcCc---cc-CCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Confidence 456667777777666555544 2255555555543 46 899999987556689999999999999999995479999
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCC-----
Q 045351 84 YDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSP----- 158 (349)
Q Consensus 84 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----- 158 (349)
||+|+++++|+.++++++|||+++|++++|++|..+.+++.++++.+++++++++.+....+......++.++..
T Consensus 92 gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (560)
T PLN02574 92 GDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFDS 171 (560)
T ss_pred CCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCccccccc
Confidence 999999999999999999999999999999999999999999999999999999877655544333333332210
Q ss_pred ------CccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCCCCC
Q 045351 159 ------EFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAARSRP 228 (349)
Q Consensus 159 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~ 228 (349)
.+..+... ...........++++++++|||||||.||||++||+++...+..+.. .+.....+
T Consensus 172 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~ 244 (560)
T PLN02574 172 KRIEFPKFYELIKE-------DFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSD 244 (560)
T ss_pred CccCcccHHHHhhc-------CCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCC
Confidence 00000100 01111122345789999999999999999999999999987765432 22212356
Q ss_pred cEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC-CCCCCcchhe
Q 045351 229 AVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM-DGYDLSSIEV 306 (349)
Q Consensus 229 ~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~-~~~~l~~lr~ 306 (349)
++++..+|++|.+|+ ..++.++..|+++++.+.+++..+++.|+++++|++.++|.++..|.+.. .. ...+++++|.
T Consensus 245 ~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~lr~ 323 (560)
T PLN02574 245 NVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKA-KGVCGEVLKSLKQ 323 (560)
T ss_pred cEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCc-cccccCccccceE
Confidence 889999999999999 56678888999999999999999999999999999999999999999875 32 4567889999
Q ss_pred ehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 307 VASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 307 i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
+++||+++++++++++.+.+++. +.|+++|.|
T Consensus 324 ~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~ 358 (560)
T PLN02574 324 VSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTEST 358 (560)
T ss_pred EEEecccCCHHHHHHHHHHCCCCcEEecccccccC
Confidence 99999999999999999998643 234455544
No 9
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.2e-40 Score=316.76 Aligned_cols=313 Identities=30% Similarity=0.435 Sum_probs=256.9
Q ss_pred eeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEc
Q 045351 12 KIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLS 91 (349)
Q Consensus 12 ~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~ 91 (349)
..+.+..+....+. ..|+.+++.+++ ..+ |+++|+++..+++++||.||.++++++|+.|.+ .|+++||+|++++
T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~l~~~~--~~~-~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~i~~ 82 (537)
T PLN02246 8 FIFRSKLPDIYIPN-HLPLHDYCFERL--SEF-SDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVMLLL 82 (537)
T ss_pred eEecCCCCCCCCCC-CCcHHHHHHHHH--HhC-CCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEC
Confidence 44556666666554 479999999999 889 999999986556899999999999999999998 9999999999999
Q ss_pred CCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----CcceEEeCCCCc-----cc
Q 045351 92 QNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYGTVLLDSPEF-----EP 162 (349)
Q Consensus 92 ~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~-----~~ 162 (349)
+|+++++++++||+++|++++|+++..+.+++..+++.++++++++++...+.+... ...++.++.... .+
T Consensus 83 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 162 (537)
T PLN02246 83 PNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSE 162 (537)
T ss_pred CCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHH
Confidence 999999999999999999999999999999999999999999999988765544321 223444432110 01
Q ss_pred cccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCCCCCcEEEEecChh
Q 045351 163 LSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAARSRPAVVLCTVPYF 238 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~l~~~p~~ 238 (349)
.... ...........++++++++|||||||.||||+++|+++...+..... .+. +..++++++..|++
T Consensus 163 ~~~~-------~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~pl~ 234 (537)
T PLN02246 163 LTQA-------DENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-FHSDDVILCVLPMF 234 (537)
T ss_pred HhcC-------CCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccC-CCCCcEEEEeechH
Confidence 1100 01111122346789999999999999999999999999987765433 344 68899999999999
Q ss_pred hHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHH
Q 045351 239 HSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLS 317 (349)
Q Consensus 239 ~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~ 317 (349)
|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|.++..|.+.. .....+++++|.+++||++++++
T Consensus 235 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~~~~gg~~l~~~ 313 (537)
T PLN02246 235 HIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSP-VVEKYDLSSIRMVLSGAAPLGKE 313 (537)
T ss_pred HHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCc-cccccCccceeEEEEecCcCCHH
Confidence 99998 55778999999999999999999999999999999999999999999876 55566788999999999999999
Q ss_pred HHHHHHHHcCCc---ccccccccC
Q 045351 318 VIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 318 ~~~~~~~~~~~~---~~~~~~~~G 338 (349)
+.+.+.+.+++. +.|+.+|.|
T Consensus 314 ~~~~~~~~~~~~~~~~~YG~tE~~ 337 (537)
T PLN02246 314 LEDAFRAKLPNAVLGQGYGMTEAG 337 (537)
T ss_pred HHHHHHHHcCCCeEeccccccccC
Confidence 999999999654 334556654
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.4e-40 Score=321.83 Aligned_cols=309 Identities=19% Similarity=0.203 Sum_probs=236.0
Q ss_pred cchhh-hhhcccCCC-CCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH
Q 045351 28 TSVTS-YVFSLLESH-APPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY 101 (349)
Q Consensus 28 ~tl~~-~l~~~~~~~-~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~ 101 (349)
.|+.. +|+..+ . .+ |+++|+++.. .++.+||+||.+++.++|+.|++ .|+++||+|+++++|++++++++
T Consensus 87 ~N~~~~~l~~~~--~~~~-~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~e~v~a~ 162 (666)
T PLN02654 87 TNICYNCLDRNV--EAGN-GDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLMELPIAM 162 (666)
T ss_pred eeHHHHHHHHhh--ccCC-CCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHH
Confidence 55644 454454 4 47 9999998742 23789999999999999999998 99999999999999999999999
Q ss_pred HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc------------------Ccc-eEEeCCCCcc-
Q 045351 102 LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL------------------KYG-TVLLDSPEFE- 161 (349)
Q Consensus 102 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------~~~-~~~~~~~~~~- 161 (349)
|||+++|++++|+++..+.+++..+++.++++++|+++......+.. ... ++..+.....
T Consensus 163 lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (666)
T PLN02654 163 LACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMK 242 (666)
T ss_pred HHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccc
Confidence 99999999999999999999999999999999999987643221110 000 1111110000
Q ss_pred --cc-cccc-CCCC----CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHH-hhhhccccCCCCCcEEE
Q 045351 162 --PL-SATD-SLDY----YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAV-AGGHAVRAARSRPAVVL 232 (349)
Q Consensus 162 --~~-~~~~-~~~~----~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~l 232 (349)
.. .... +..+ .............++++++|+|||||||.||||+++|++++... ......++ +.++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~-~~~~d~~~ 321 (666)
T PLN02654 243 REDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFD-YKPTDVYW 321 (666)
T ss_pred ccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcC-CCCCcEEE
Confidence 00 0000 0000 00000011123467999999999999999999999999986543 34445555 78899999
Q ss_pred EecChhhHhhH-HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchh
Q 045351 233 CTVPYFHSYGF-TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIE 305 (349)
Q Consensus 233 ~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr 305 (349)
+..|+.|+.|. ..++.+|+.|+++++.++ +++..+++.|+++++|++.++|++++.|.+.. . ....++++||
T Consensus 322 ~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~l~~Lr 400 (666)
T PLN02654 322 CTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDG-DEYVTRHSRKSLR 400 (666)
T ss_pred EcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhC-ccccccCChhhee
Confidence 99999999998 667899999999999863 48999999999999999999999999999875 3 3456789999
Q ss_pred eehccCCCCCHHHHHHHHHHcCC-----cccccccccCceee
Q 045351 306 VVASGGAHLTLSVIRKYLQLNRT-----VNRQLCLEFGAPII 342 (349)
Q Consensus 306 ~i~~gG~~l~~~~~~~~~~~~~~-----~~~~~~~~~G~~~i 342 (349)
.+++||+++++++++++.+.++. .+.|+.+|.|+..+
T Consensus 401 ~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~ 442 (666)
T PLN02654 401 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMI 442 (666)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeee
Confidence 99999999999999999999863 44566677665443
No 11
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.2e-40 Score=324.55 Aligned_cols=299 Identities=17% Similarity=0.180 Sum_probs=230.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC-----CCC--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT-----ASR--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~-----~~~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|+.++|...+ +++ |+++|+.+. ..+ +++||+||.++++++|+.|.+ .|+++||+|+|+++|+++|+++
T Consensus 43 ~t~~~~l~~~~--~~~-p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~~ 118 (660)
T PLN02861 43 DSPWQFFSDAV--KKY-PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWIIA 118 (660)
T ss_pred CCHHHHHHHHH--HhC-CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 68999999999 999 999999641 112 579999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c--Ccc-eEEeCCCC--------------
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L--KYG-TVLLDSPE-------------- 159 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~--~~~-~~~~~~~~-------------- 159 (349)
++||+++|++++|+++..+.+++.++++.++++++|+++...+.+.. . ..+ ++..+...
T Consensus 119 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 198 (660)
T PLN02861 119 MEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSC 198 (660)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEE
Confidence 99999999999999999999999999999999999998655433211 1 122 33333211
Q ss_pred --ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc----CCCCCcEEEE
Q 045351 160 --FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA----ARSRPAVVLC 233 (349)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~~~~~~~~l~ 233 (349)
+.++... ...........++++++|+|||||||.||||++||++++..+......+. .+..+|++++
T Consensus 199 ~~~~~~~~~-------~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~ 271 (660)
T PLN02861 199 FSWEEFSLM-------GSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFS 271 (660)
T ss_pred EEHHHHHHh-------CcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEE
Confidence 0011100 00001112346799999999999999999999999999988766544332 1367899999
Q ss_pred ecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC--------------------
Q 045351 234 TVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-------------------- 293 (349)
Q Consensus 234 ~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-------------------- 293 (349)
.+|++|.+++...+.+++.|+++++.+ +++..+++.|+++++|+++++|.+++.|.+.-
T Consensus 272 ~lPl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~ 350 (660)
T PLN02861 272 YLPLAHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYN 350 (660)
T ss_pred ECcHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 999999999865667899999998884 68999999999999999999999999886410
Q ss_pred --------C--------CCCCC-------CC-cchheehccCCCCCHHHHHHHHHHcCC---cccccccccCc
Q 045351 294 --------G--------TMDGY-------DL-SSIEVVASGGAHLTLSVIRKYLQLNRT---VNRQLCLEFGA 339 (349)
Q Consensus 294 --------~--------~~~~~-------~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~---~~~~~~~~~G~ 339 (349)
+ ..... .+ +++|.+++||+++++++. +|.+.++. .+.|++||.++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~ 422 (660)
T PLN02861 351 YKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCG 422 (660)
T ss_pred HHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhh
Confidence 0 00000 11 578999999999999975 56666643 34566777654
No 12
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.9e-40 Score=316.90 Aligned_cols=301 Identities=18% Similarity=0.185 Sum_probs=242.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|.+.+ +++ |+++|+++.. .+++||+||.++++++|+.|.+ .+||+|+++++|+++++++++||+++
T Consensus 19 ~~~~~~~~~~~--~~~-p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~~ 90 (539)
T PRK06334 19 KTVLESFLKLC--SEM-TTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLLS 90 (539)
T ss_pred CcHHHHHHHHH--HhC-CCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHhc
Confidence 58999999999 999 9999998862 4789999999999999999997 38999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-------CcceEEeCCCC----ccccccccC-CCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-------KYGTVLLDSPE----FEPLSATDS-LDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~-~~~~~~~ 175 (349)
|++++|+++..+.+++.++++.+++++++++.+....+... ...++..+... +.+...... .......
T Consensus 91 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (539)
T PRK06334 91 GKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFEW 170 (539)
T ss_pred CCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCchh
Confidence 99999999999999999999999999999987654443321 11233322110 000000000 0000000
Q ss_pred --ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhc
Q 045351 176 --EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGM 252 (349)
Q Consensus 176 --~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~ 252 (349)
.........++++++|+|||||||.||||++||+++..........++ +..+|++++.+|++|.+|+ ..++.++..
T Consensus 171 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~ 249 (539)
T PRK06334 171 LMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFS-PKEDDVMMSFLPPFHAYGFNSCTLFPLLS 249 (539)
T ss_pred hhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcC-CCCCceEEEecchHhhhhhHHHHHHHHHc
Confidence 000112456789999999999999999999999999988877776676 6889999999999999999 567889999
Q ss_pred CCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--
Q 045351 253 GESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV-- 329 (349)
Q Consensus 253 G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~-- 329 (349)
|+++++.. .+++..+++.|+++++|++.++|.+++.|++.. .....++++||.+++||+++++++.+++.+.+++.
T Consensus 250 G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 250 GVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTA-KKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred CCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhh-hhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 99999885 589999999999999999999999999999876 55566789999999999999999999999998643
Q ss_pred -ccccccccC
Q 045351 330 -NRQLCLEFG 338 (349)
Q Consensus 330 -~~~~~~~~G 338 (349)
+.|+.||.|
T Consensus 329 ~~~YG~TE~~ 338 (539)
T PRK06334 329 RQGYGTTECS 338 (539)
T ss_pred EecccccccC
Confidence 345566654
No 13
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=6.8e-40 Score=318.50 Aligned_cols=311 Identities=17% Similarity=0.185 Sum_probs=238.2
Q ss_pred cch-hhhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHH
Q 045351 28 TSV-TSYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYL 102 (349)
Q Consensus 28 ~tl-~~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~l 102 (349)
.|+ .+.+...+ ... |+++|+++.. .++.+||+||.++++++|+.|++ .|+++||+|+++++|++++++++|
T Consensus 51 ~n~~~~~l~~~~--~~~-p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v~~~l 126 (628)
T TIGR02316 51 TNLCHNALDRHL--DER-GEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAVFAML 126 (628)
T ss_pred eeHHHHHHHHHh--CcC-CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHH
Confidence 444 45666677 778 9999999731 24789999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc---------c----c---ccCcceEEeCCCCcc-cccc
Q 045351 103 SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK---------I----P---QLKYGTVLLDSPEFE-PLSA 165 (349)
Q Consensus 103 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~----~---~~~~~~~~~~~~~~~-~~~~ 165 (349)
||+++|++++|+++..+.+++.++++.++++++|+++..... + . .....++.++..... ....
T Consensus 127 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 206 (628)
T TIGR02316 127 ACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIP 206 (628)
T ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCccc
Confidence 999999999999999999999999999999999997643210 0 0 011223333321000 0000
Q ss_pred ccCCCCC---CC--CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHH-hhhhccccCCCCCcEEEEecChhh
Q 045351 166 TDSLDYY---DD--DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAV-AGGHAVRAARSRPAVVLCTVPYFH 239 (349)
Q Consensus 166 ~~~~~~~---~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~l~~~p~~~ 239 (349)
..+..+. .. ..........++++++|+|||||||.||||+++|.+++... ......++ +.++|++++..|+.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 285 (628)
T TIGR02316 207 GRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFG-IRAGQVMFSASDVGW 285 (628)
T ss_pred CccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcC-CCCCcEEEEcCCCCe
Confidence 0000000 00 00011122467899999999999999999999999986443 33444455 688899999999999
Q ss_pred HhhH-HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchheehccCC
Q 045351 240 SYGF-TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGA 312 (349)
Q Consensus 240 ~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~ 312 (349)
+.|+ ..++.+|+.|+++++.+. +++..+++.|+++++|+++++|++++.|.+.. . ....++++||.+++||+
T Consensus 286 ~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 286 VVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQD-AAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcC-CcccccCCccceeEEEEecC
Confidence 9997 678899999999999863 48999999999999999999999999998764 2 34567899999999999
Q ss_pred CCCHHHHHHHHHHcC--CcccccccccCceeeec
Q 045351 313 HLTLSVIRKYLQLNR--TVNRQLCLEFGAPIISL 344 (349)
Q Consensus 313 ~l~~~~~~~~~~~~~--~~~~~~~~~~G~~~i~~ 344 (349)
++++++++++.+.++ ..+.|+.||.|..+++.
T Consensus 365 ~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~ 398 (628)
T TIGR02316 365 PLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAI 398 (628)
T ss_pred CCCHHHHHHHHHHhCCCEEecccccccCceeecC
Confidence 999999999998885 34456678877555443
No 14
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.9e-40 Score=320.64 Aligned_cols=300 Identities=16% Similarity=0.132 Sum_probs=238.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEe---CCC----CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALID---TAS----RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~---~~~----~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|+.+.+...+ +.+ |+++|+.. .+. .+.+||+||.++++++|+.|.+ .|+++||+|+|+++|+++|+++
T Consensus 44 ~tl~~~l~~~a--~~~-p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 44 GTLHDNFVYAV--ETF-RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCHHHHHHHHH--HhC-CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHH
Confidence 68999999999 999 99999942 111 2569999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-Ccc-eEEeCCCC---------------
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KYG-TVLLDSPE--------------- 159 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~~-~~~~~~~~--------------- 159 (349)
++||+++|++++|+++..+.+++.++++.++++++|++.+..+.+.. . ..+ ++..+..+
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 199 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIV 199 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEE
Confidence 99999999999999999999999999999999999998765443221 1 112 22222110
Q ss_pred -ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChh
Q 045351 160 -FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYF 238 (349)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~ 238 (349)
+.++.... ...........++++++|+|||||||.||||++||+++...+......++ +.++|++++.+|++
T Consensus 200 ~~~~~~~~~------~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~-~~~~d~~l~~lPl~ 272 (651)
T PLN02736 200 TYSKLLAQG------RSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTK-FYPSDVHISYLPLA 272 (651)
T ss_pred EHHHHHHhc------ccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccC-CCCCCEEEEeCCHH
Confidence 01111100 00001122356799999999999999999999999999999888877777 68899999999999
Q ss_pred hHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCC------------------------
Q 045351 239 HSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG------------------------ 294 (349)
Q Consensus 239 ~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~------------------------ 294 (349)
|.+++...+.+++.|+++++.+. ++..+++.|+++++|+++++|.+++.|.+...
T Consensus 273 h~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (651)
T PLN02736 273 HIYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQA 351 (651)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999888899999999988864 88999999999999999999999988765310
Q ss_pred ----CCCC------------CCC-cchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 295 ----TMDG------------YDL-SSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 295 ----~~~~------------~~l-~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
.... ..+ +++|.+++||+++++++.+++.+.++ ..+.|++||.++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 415 (651)
T PLN02736 352 LENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSC 415 (651)
T ss_pred HHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhch
Confidence 0000 011 48999999999999999999998875 234456666654
No 15
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.6e-40 Score=317.81 Aligned_cols=303 Identities=20% Similarity=0.226 Sum_probs=235.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC---CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA---SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.|+.+.|...+ ..+ |+++|+++.+ ..+++||+||.++++++|++|.+ .|+++||+|+++++|+++|+++++||
T Consensus 39 ~~l~~~l~~~a--~~~-p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~lA~ 114 (614)
T PRK08180 39 RRLTDRLVHWA--QEA-PDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLALAA 114 (614)
T ss_pred ccHHHHHHHHH--HHC-CCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 68999999999 889 9999998742 13789999999999999999998 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCC-----HHHHHHHHhhcCCeEEEEcCcc--cccccc---cCcceEEeCCC-------Ccccccccc
Q 045351 105 FSLGVVVSPCNPSCT-----IPEILRQIHLSKPVIAFATHDT--AHKIPQ---LKYGTVLLDSP-------EFEPLSATD 167 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~-----~~~l~~~l~~~~~~~i~~~~~~--~~~~~~---~~~~~~~~~~~-------~~~~~~~~~ 167 (349)
+++|++++|+++.++ .+++.++++.++++++++++.. ...+.. ....++..+.. .+.++....
T Consensus 115 ~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 194 (614)
T PRK08180 115 MYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLATP 194 (614)
T ss_pred HHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhccc
Confidence 999999999999988 7999999999999999997531 111111 12223332211 111111110
Q ss_pred CCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCC--CCcEEEEecChhhHhhH-H
Q 045351 168 SLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARS--RPAVVLCTVPYFHSYGF-T 244 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~-~ 244 (349)
.. ...........++++++|+|||||||.||||++||+++...+......+. .. .++++++.+|++|.+|+ .
T Consensus 195 ~~----~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~lPl~h~~g~~~ 269 (614)
T PRK08180 195 PT----AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFP-FLAEEPPVLVDWLPWNHTFGGNH 269 (614)
T ss_pred cc----cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhcc-ccCCCCcEEEEecchHHHhhHHH
Confidence 00 00001112346789999999999999999999999999988877666655 32 56899999999999998 6
Q ss_pred HHHhhhhcCCEEEEcC-CCCH---HHHHHHHHhhcccEEEechHHHHHHHhcCC---CCCCCCCcchheehccCCCCCHH
Q 045351 245 CCLRSLGMGESLVCMG-KFDF---GRMLKAVEEFRVSHVVLAPPVVLKMARDGG---TMDGYDLSSIEVVASGGAHLTLS 317 (349)
Q Consensus 245 ~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~---~~~~~~l~~lr~i~~gG~~l~~~ 317 (349)
.++.+++.|+++++.+ .+++ ..+++.++++++|+++++|.+++.|++... .....++++||.+++||++++++
T Consensus 270 ~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~ 349 (614)
T PRK08180 270 NLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQD 349 (614)
T ss_pred HHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHH
Confidence 7778999999999976 3444 467889999999999999999999987430 22344578999999999999999
Q ss_pred HHHHHHHHc----C----CcccccccccCc
Q 045351 318 VIRKYLQLN----R----TVNRQLCLEFGA 339 (349)
Q Consensus 318 ~~~~~~~~~----~----~~~~~~~~~~G~ 339 (349)
+.+++.+.+ + ..+.|++||.|.
T Consensus 350 ~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~ 379 (614)
T PRK08180 350 VWDRLDRVAEATCGERIRMMTGLGMTETAP 379 (614)
T ss_pred HHHHHHHHHHhhcCCCceeeeeecccccCC
Confidence 999998752 2 234456677653
No 16
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.9e-40 Score=320.29 Aligned_cols=298 Identities=16% Similarity=0.146 Sum_probs=229.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC-----CCC--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT-----ASR--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~-----~~~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|+.+++...+ +.+ |+++|+.+. ..+ +++||+||.++++++|+.|.+ .|+++||+|+|+++|+++|+++
T Consensus 45 ~t~~~~l~~~a--~~~-pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~~ 120 (666)
T PLN02614 45 DSCWDVFRMSV--EKY-PNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWIIS 120 (666)
T ss_pred CcHHHHHHHHH--HhC-CCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 58999999999 899 999999842 112 358999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc-c-----Cc-ceEEeCCCC--------------
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ-L-----KY-GTVLLDSPE-------------- 159 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-~-----~~-~~~~~~~~~-------------- 159 (349)
++||+++|++++|+++..+.+++.++++.++++++|++++....+.. . .. .++.++...
T Consensus 121 ~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~ 200 (666)
T PLN02614 121 MEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVI 200 (666)
T ss_pred HHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEE
Confidence 99999999999999999999999999999999999998754333211 0 01 233333210
Q ss_pred --ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc-----cCCCCCcEEE
Q 045351 160 --FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR-----AARSRPAVVL 232 (349)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~l 232 (349)
+.++..... ..........++|+++|+|||||||.||||++||+++...+......+ . +..+|+++
T Consensus 201 ~~~~~~~~~~~------~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~-~~~~d~~l 273 (666)
T PLN02614 201 YAWDEFLKLGE------GKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAA-LTVKDVYL 273 (666)
T ss_pred EEHHHHHhhcc------cCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccC-CCCCcEEE
Confidence 011110000 000111234678999999999999999999999999998876654332 3 57889999
Q ss_pred EecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC----------------
Q 045351 233 CTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM---------------- 296 (349)
Q Consensus 233 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~---------------- 296 (349)
+.+|++|.+++......++.|+++++.+ +++..+++.|+++++|+++++|.+++.|.... ..
T Consensus 274 ~~lPl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~-~~~~~~~~~~~~~~~~~a 351 (666)
T PLN02614 274 SYLPLAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGL-QKKLSDGGFLKKFVFDSA 351 (666)
T ss_pred EeccHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHH-HHHHhccCHHHHHHHHHH
Confidence 9999999999866667788999998875 69999999999999999999999999886421 00
Q ss_pred ---------------CCC-------------CC-cchheehccCCCCCHHHHHHHHHHcCC---cccccccccCc
Q 045351 297 ---------------DGY-------------DL-SSIEVVASGGAHLTLSVIRKYLQLNRT---VNRQLCLEFGA 339 (349)
Q Consensus 297 ---------------~~~-------------~l-~~lr~i~~gG~~l~~~~~~~~~~~~~~---~~~~~~~~~G~ 339 (349)
... .+ ++||.+++||+++++.+ ++|.+.+++ .+.|++||.++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~ 425 (666)
T PLN02614 352 FSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCA 425 (666)
T ss_pred HHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhh
Confidence 000 01 68999999999999875 667777643 34456666543
No 17
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-39 Score=319.49 Aligned_cols=307 Identities=20% Similarity=0.176 Sum_probs=237.5
Q ss_pred cchhhhhh-cccCCCCCCCCCeEEEeCCCC------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVF-SLLESHAPPPDTTALIDTASR------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~-~~~~~~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|+.+.+. ..+ ... |+++|+++.+++ +.+||+||.+++.++|+.|++ .|+++||+|+++++|+++++++
T Consensus 174 ln~~~~~l~~~~--~~~-pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~e~via 249 (728)
T PLN03052 174 LNVAECCLTPKP--SKT-DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNVHAVII 249 (728)
T ss_pred eEHHHHHHHHHh--ccC-CCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHH
Confidence 56666444 444 557 999999986432 589999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccc----------ccCcceEEeCCC------------
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIP----------QLKYGTVLLDSP------------ 158 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~------------ 158 (349)
+|||+++|++++|+++..+.+++.++++.++++++|+++.....-+ .....++++...
T Consensus 250 ~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 329 (728)
T PLN03052 250 YLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGD 329 (728)
T ss_pred HHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCC
Confidence 9999999999999999999999999999999999999875321100 001112222211
Q ss_pred -CccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecCh
Q 045351 159 -EFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPY 237 (349)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~ 237 (349)
.+.++...... . ............++++++|+|||||||.||||+++|.+++.........++ +.++|++++..|+
T Consensus 330 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~-l~~~d~~~~~~~l 406 (728)
T PLN03052 330 MSWDDFLARANG-L-RRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLD-IRKGDIVCWPTNL 406 (728)
T ss_pred ccHHHHHhcccc-c-cccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcC-CCCCcEEEECCCc
Confidence 01111110000 0 000000111235689999999999999999999999998776655444455 6889999999999
Q ss_pred hhHhhHHHHHhhhhcCCEEEEcCC-CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCH
Q 045351 238 FHSYGFTCCLRSLGMGESLVCMGK-FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTL 316 (349)
Q Consensus 238 ~~~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~ 316 (349)
.|+.+...++.+|+.|+++++.++ .++..+++.++++++|++.++|++++.|.+.. ...+.++++||.+++||+++++
T Consensus 407 ~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~-~~~~~dlssLr~i~s~Ge~l~~ 485 (728)
T PLN03052 407 GWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTN-CMAGLDWSSIRCFGSTGEASSV 485 (728)
T ss_pred HHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcC-CcccCChhheeEEEecCCCCCH
Confidence 999999888899999999999964 46678999999999999999999999998875 5567889999999999999999
Q ss_pred HHHHHHHHHcC---CcccccccccCceee
Q 045351 317 SVIRKYLQLNR---TVNRQLCLEFGAPII 342 (349)
Q Consensus 317 ~~~~~~~~~~~---~~~~~~~~~~G~~~i 342 (349)
+...++.+.++ ..+.|+.||.|+.++
T Consensus 486 ~~~~~~~~~~~~~~i~~~yG~TE~~~~~~ 514 (728)
T PLN03052 486 DDYLWLMSRAGYKPIIEYCGGTELGGGFV 514 (728)
T ss_pred HHHHHHHHhcCCCCeEeeccChhhCcccc
Confidence 99888887663 445567777765444
No 18
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-39 Score=310.59 Aligned_cols=308 Identities=24% Similarity=0.316 Sum_probs=249.9
Q ss_pred CCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhc-CCCCCCEEEEEcCCCchHHHH
Q 045351 22 AFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKY-KLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 22 ~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~-g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.+|. .|+.+.|...+ +.+ |+++|+++. ++.+||+||.+++.++|+.|.+ . |+++||+|+++++|+++++++
T Consensus 6 ~~~~--~tl~~~l~~~a--~~~-~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~ 77 (546)
T PRK08314 6 TLPE--TSLFHNLEVSA--RRY-PDKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIA 77 (546)
T ss_pred CCCC--CCHHHHHHHHH--HHc-CCCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHH
Confidence 4555 89999999999 899 999999987 7899999999999999999998 7 999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----Ccc-eEEeCCCCc---------cccccc
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYG-TVLLDSPEF---------EPLSAT 166 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~-~~~~~~~~~---------~~~~~~ 166 (349)
++||+++|++++|+++..+.+++.++++.+++++++++......+... ... ++.....+. ..+...
T Consensus 78 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 78 YYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred HHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccccccc
Confidence 999999999999999999999999999999999999988765544321 111 111110000 000000
Q ss_pred cC----------CCCC---CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEE
Q 045351 167 DS----------LDYY---DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLC 233 (349)
Q Consensus 167 ~~----------~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~ 233 (349)
.. ..+. ............++++++|+|||||||.||+|.++|++++.++......+. +..+|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~ 236 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSN-STPESVVLA 236 (546)
T ss_pred ccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC-CCCCceEEE
Confidence 00 0000 000011122456789999999999999999999999999998888777766 689999999
Q ss_pred ecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCC
Q 045351 234 TVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGA 312 (349)
Q Consensus 234 ~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~ 312 (349)
.+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|.++..+...+ .....+++++|.+++||+
T Consensus 237 ~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~-~~~~~~~~~l~~~~~gG~ 315 (546)
T PRK08314 237 VLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASP-GLAERDLSSLRYIGGGGA 315 (546)
T ss_pred EcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCC-CccccCchhhheeeeccc
Confidence 9999999998 67789999999999999999999999999999999999999999998876 556667889999999999
Q ss_pred CCCHHHHHHHHHHcCC--cccccccccCc
Q 045351 313 HLTLSVIRKYLQLNRT--VNRQLCLEFGA 339 (349)
Q Consensus 313 ~l~~~~~~~~~~~~~~--~~~~~~~~~G~ 339 (349)
++++++++++.+.++. .+.|+.+|.|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 344 (546)
T PRK08314 316 AMPEAVAERLKELTGLDYVEGYGLTETMA 344 (546)
T ss_pred cCCHHHHHHHHHHcCCcEEeccccccccc
Confidence 9999999999998842 23345566543
No 19
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4e-39 Score=308.69 Aligned_cols=306 Identities=20% Similarity=0.235 Sum_probs=247.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC----CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS----RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.|+.+.|...+ +.+ |+++|+++.+. .+.+||+||.++++++|++|.+ .|+++||+|+++++|++++++++||
T Consensus 24 ~~l~~~l~~~a--~~~-p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 24 RTINDDLDACV--ASC-PDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCHHHHHHHHH--HHC-CCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHH
Confidence 68999999999 889 99999998632 2899999999999999999998 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc-----cccc----c-Cc-ceEEeCCCCc---cccccccCC
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH-----KIPQ----L-KY-GTVLLDSPEF---EPLSATDSL 169 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~----~-~~-~~~~~~~~~~---~~~~~~~~~ 169 (349)
|+++|++++|+++..+.+++.++++.++++++++++.... .+.. . .. .++.++.... .++......
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPAW 179 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCcc
Confidence 9999999999999999999999999999999999875411 1110 0 11 2333332211 111111000
Q ss_pred CC-CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHH
Q 045351 170 DY-YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCL 247 (349)
Q Consensus 170 ~~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~ 247 (349)
.. .............++++++++|||||||.||+|+++|+++...+......++ +.+++++++..|++|.+|+ ..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~l~~~p~~h~~g~~~~~~ 258 (547)
T PRK13295 180 EQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLG-LGADDVILMASPMAHQTGFMYGLM 258 (547)
T ss_pred ccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhC-CCCCCeEEEecCchhhhhHHHHHH
Confidence 00 0001111122356789999999999999999999999999998888777777 6889999999999999988 6788
Q ss_pred hhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 248 RSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 248 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
.++..|+++++.+.+++..+++.++++++|++.++|.++..|.... .....++++||.+++||+++++++.+++.+.++
T Consensus 259 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~-~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~ 337 (547)
T PRK13295 259 MPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAV-KESGRPVSSLRTFLCAGAPIPGALVERARAALG 337 (547)
T ss_pred HHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcc-cccCCCcccceEEEEecCCCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999876 556677899999999999999999999999883
Q ss_pred --CcccccccccCc
Q 045351 328 --TVNRQLCLEFGA 339 (349)
Q Consensus 328 --~~~~~~~~~~G~ 339 (349)
..+.|+.||.|.
T Consensus 338 ~~~~~~YG~TE~~~ 351 (547)
T PRK13295 338 AKIVSAWGMTENGA 351 (547)
T ss_pred CCeEEeccCCCCCC
Confidence 334455666553
No 20
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5.2e-39 Score=307.88 Aligned_cols=317 Identities=23% Similarity=0.377 Sum_probs=252.7
Q ss_pred eeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEc
Q 045351 12 KIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLS 91 (349)
Q Consensus 12 ~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~ 91 (349)
..+.++.+..+.+. ..|+.+++...+ ..+ |+++|+++..+++.+||.||.+++.++|+.|.+ .|+++||+|++++
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~l~~~a--~~~-p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~ 87 (546)
T PLN02330 13 HIFRSRYPSVPVPD-KLTLPDFVLQDA--ELY-ADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVVVVVL 87 (546)
T ss_pred eeeccCCCCCCCCC-CCcHHHHHhhhh--hcC-CCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEC
Confidence 44555666655444 478999999999 999 999999986557899999999999999999998 9999999999999
Q ss_pred CCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCC------cccccc
Q 045351 92 QNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPE------FEPLSA 165 (349)
Q Consensus 92 ~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 165 (349)
+|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+......++.++... +.++..
T Consensus 88 ~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 167 (546)
T PLN02330 88 PNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLE 167 (546)
T ss_pred CCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHh
Confidence 99999999999999999999999999999999999999999999999887766655444554444221 222221
Q ss_pred ccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc-CCCCCcEEEEecChhhHhhH-
Q 045351 166 TDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA-ARSRPAVVLCTVPYFHSYGF- 243 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~- 243 (349)
.... ...........++++++++|||||||.||||.++|+++...+........ .....++.+...|++|.+|+
T Consensus 168 ~~~~----~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~ 243 (546)
T PLN02330 168 AADR----AGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGIT 243 (546)
T ss_pred hccc----cCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHH
Confidence 1100 00011122345689999999999999999999999999876654322221 12345689999999999998
Q ss_pred HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCc--chheehccCCCCCHHHHHH
Q 045351 244 TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLS--SIEVVASGGAHLTLSVIRK 321 (349)
Q Consensus 244 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~--~lr~i~~gG~~l~~~~~~~ 321 (349)
..++.++..|+++++.+.+++..+++.++++++|++.++|.++..+...+ .....+++ ++|.+++||++++++++++
T Consensus 244 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~~~l~~i~~~g~~l~~~~~~~ 322 (546)
T PLN02330 244 GICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNP-IVEEFDLSKLKLQAIMTAAAPLAPELLTA 322 (546)
T ss_pred HHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCc-cccccccchheeeeEEEcCCcCCHHHHHH
Confidence 56778899999999999999999999999999999999999999998875 44445554 4789999999999999999
Q ss_pred HHHHcCCc---ccccccccC
Q 045351 322 YLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 322 ~~~~~~~~---~~~~~~~~G 338 (349)
+.+.|++. +.|+.+|.|
T Consensus 323 ~~~~~~~~~~~~~YG~tE~~ 342 (546)
T PLN02330 323 FEAKFPGVQVQEAYGLTEHS 342 (546)
T ss_pred HHHHcCCCeEEecccccccc
Confidence 99998543 334556654
No 21
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-39 Score=308.31 Aligned_cols=310 Identities=19% Similarity=0.220 Sum_probs=241.9
Q ss_pred ccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC
Q 045351 15 HSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS 94 (349)
Q Consensus 15 ~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~ 94 (349)
+...+...+|+ |+.+.|...+ +.+ |+++|+++.+.++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+
T Consensus 4 ~~~~~~~~~~~---~~~~~l~~~a--~~~-p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~ 76 (540)
T PRK05857 4 KKFQAMPQLPS---TVLDRVFEQA--RQQ-PEAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNG 76 (540)
T ss_pred ccccccccCCc---chHHHHHHHH--hhC-CCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCC
Confidence 34556666665 8999999999 999 999999875446789999999999999999998 9999999999999999
Q ss_pred chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----CcceEEeCCCCccccccccCC
Q 045351 95 VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYGTVLLDSPEFEPLSATDSL 169 (349)
Q Consensus 95 ~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 169 (349)
+++++++|||+++|++++|+++..+.+++.++++.++++++++++........+ ....+..+.............
T Consensus 77 ~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (540)
T PRK05857 77 PETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLD 156 (540)
T ss_pred HHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccccccccc
Confidence 999999999999999999999999999999999999999999987653221111 112222222111100000000
Q ss_pred CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCCCCCcEEEEecChhhHhhHHH
Q 045351 170 DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAARSRPAVVLCTVPYFHSYGFTC 245 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~l~~~p~~~~~g~~~ 245 (349)
...........++++++++|||||||.||||.+||+++..+...... .+. ...++++++.+|++|.+++..
T Consensus 157 ----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~h~~~l~~ 231 (540)
T PRK05857 157 ----AASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVT-WVVGETTYSPLPATHIGGLWW 231 (540)
T ss_pred ----ccccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccc-cccCceeeecCCccccchHHH
Confidence 00001122356789999999999999999999999999876543221 122 456789999999999999988
Q ss_pred HHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHH
Q 045351 246 CLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQL 325 (349)
Q Consensus 246 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 325 (349)
.+.+++.|+++++. ..++..+++.|+++++|+++++|.+++.|.+.. .....+++++|.+++||++++....+ +.+.
T Consensus 232 ~~~~l~~G~~~v~~-~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~ 308 (540)
T PRK05857 232 ILTCLMHGGLCVTG-GENTTSLLEILTTNAVATTCLVPTLLSKLVSEL-KSANATVPSLRLVGYGGSRAIAADVR-FIEA 308 (540)
T ss_pred HHHHhhcceeEEec-CCChhHHHHHHHhcCcceEEeChHHHHHHHhcc-ccCCCcCccceEEEEcCccCCchhHH-HHHH
Confidence 88999999998764 568999999999999999999999999998876 55667789999999999999988775 4555
Q ss_pred cC--CcccccccccCc
Q 045351 326 NR--TVNRQLCLEFGA 339 (349)
Q Consensus 326 ~~--~~~~~~~~~~G~ 339 (349)
++ ..+.|+.+|.|.
T Consensus 309 ~g~~i~~~YG~TE~~~ 324 (540)
T PRK05857 309 TGVRTAQVYGLSETGC 324 (540)
T ss_pred hCCeeecccCCCcCCc
Confidence 53 334456677654
No 22
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=289.90 Aligned_cols=296 Identities=20% Similarity=0.235 Sum_probs=253.2
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
+.|+.+.+.+++ +++ |+++|+++.+.++.+||+|+.+.+++.|+.|.. .|++.||.|+++++|++||+.++|++++
T Consensus 76 ~~ti~~~F~~~v--rr~-p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLaK 151 (649)
T KOG1179|consen 76 RRTIAELFLSQV--RRQ-PDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLAK 151 (649)
T ss_pred CCcHHHHHHHHH--HhC-CCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHHh
Confidence 489999999999 999 999999998777999999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-------CcceEEeCCC----CccccccccCCCCCCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-------KYGTVLLDSP----EFEPLSATDSLDYYDDD 175 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 175 (349)
+|++.+.||++...+.+.|.++.++++.++++.+..+.+.+. +......+.. ...++....+.....+.
T Consensus 152 lGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~v 231 (649)
T KOG1179|consen 152 LGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPV 231 (649)
T ss_pred hCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCC
Confidence 999999999999999999999999999999998766444331 2223333211 12233333222111122
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGE 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~ 254 (349)
+........-.++++.+|||||||.||+.++||.-...........++ ++++|+++..+|+||..|. .++..++..|+
T Consensus 232 p~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g-~~~~DvvY~~lPLYHsaa~ilGi~~~l~~Ga 310 (649)
T KOG1179|consen 232 PVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFG-MTADDVVYTTLPLYHSAAGILGIGGCLLHGA 310 (649)
T ss_pred CcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEcchhHHHHHHHHHHHHHHhcCc
Confidence 223444566678999999999999999999999999988887888888 8999999999999999988 89999999999
Q ss_pred EEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcc
Q 045351 255 SLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVN 330 (349)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 330 (349)
|+|+-.+|++..+|+...+|++|+..-+-.+++.|++++ ......-..+|..+ |..+-+++|++|.++|+..+
T Consensus 311 T~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p-~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~ 383 (649)
T KOG1179|consen 311 TVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQP-PSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIK 383 (649)
T ss_pred eEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCC-CChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCe
Confidence 999999999999999999999999999999999999998 76666677889888 88899999999999997653
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=5.8e-39 Score=312.18 Aligned_cols=307 Identities=20% Similarity=0.205 Sum_probs=234.8
Q ss_pred hhhhhcccCCCCCCCCCeEEEeCCC----CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 31 TSYVFSLLESHAPPPDTTALIDTAS----RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 31 ~~~l~~~~~~~~~~~~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.+.|...+ ..+ |+++|+++... .+.+||+||.+++.++|+.|++ +|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~l~~~~--~~~-p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 60 YNCVDRHL--EAR-PDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred HHHHHHhh--ccC-CCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 44555667 778 99999987432 3689999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc---------c----cccC--cc-eEEeCCCCcc-ccccccCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK---------I----PQLK--YG-TVLLDSPEFE-PLSATDSL 169 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~----~~~~--~~-~~~~~~~~~~-~~~~~~~~ 169 (349)
+|++++|+++..+.+++.++++.++++++|+++..... + .... .. ++.++..... ........
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDV 215 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccc
Confidence 99999999999999999999999999999998753211 0 0011 11 2222211100 00000000
Q ss_pred C----CCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEecChhhHhhH-
Q 045351 170 D----YYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCTVPYFHSYGF- 243 (349)
Q Consensus 170 ~----~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~g~- 243 (349)
. ..............++++++|+|||||||.||||+++|++++..... ....++ +.++|++++..|++|..|.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~g~~ 294 (625)
T TIGR02188 216 WWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFD-IKDGDIFWCTADVGWITGHS 294 (625)
T ss_pred cHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccC-CCCCcEEEECCCchhhhccH
Confidence 0 00001111122456789999999999999999999999998765544 333444 6888999999999999987
Q ss_pred HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCC-CCCCCCCcchheehccCCCCCHHH
Q 045351 244 TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG-TMDGYDLSSIEVVASGGAHLTLSV 318 (349)
Q Consensus 244 ~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~~l~~lr~i~~gG~~l~~~~ 318 (349)
..++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+... .....++++||.+++||+++++++
T Consensus 295 ~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 374 (625)
T TIGR02188 295 YIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEA 374 (625)
T ss_pred HHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHH
Confidence 568899999999999853 489999999999999999999999999988641 123467899999999999999999
Q ss_pred HHHHHHHcCC-----cccccccccCceee
Q 045351 319 IRKYLQLNRT-----VNRQLCLEFGAPII 342 (349)
Q Consensus 319 ~~~~~~~~~~-----~~~~~~~~~G~~~i 342 (349)
++++.+.++. .+.|+.||.|..++
T Consensus 375 ~~~~~~~~~~~~~~i~~~yG~TE~~~~~~ 403 (625)
T TIGR02188 375 WMWYYKVVGKERCPIVDTWWQTETGGIMI 403 (625)
T ss_pred HHHHHHHcCCCCCceEecccccccCCcee
Confidence 9999998853 24456677665443
No 24
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-39 Score=308.17 Aligned_cols=294 Identities=18% Similarity=0.209 Sum_probs=243.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.++|...+ +++ |+++|+++. ++.+||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 43 ~~~~~~l~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 116 (537)
T PRK13382 43 MGPTSGFAIAA--QRC-PDRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANRI 116 (537)
T ss_pred CCHHHHHHHHH--HhC-CCCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHHc
Confidence 68999999999 999 999999986 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc------CcceEEeCCCC----ccccccccCCCCCCCCcc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL------KYGTVLLDSPE----FEPLSATDSLDYYDDDEE 177 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 177 (349)
|++++|+++..+.+++.++++.+++++++++.+....+... ...+....... +..+... ...
T Consensus 117 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 188 (537)
T PRK13382 117 GADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAA--------HAG 188 (537)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhc--------cCc
Confidence 99999999999999999999999999999987654433220 01111111110 1111110 000
Q ss_pred ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEE
Q 045351 178 RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 178 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v 257 (349)
. .....+++.++++|||||||.||||+++|+++..........+. +..+++++...|++|.+|+..++.++..|++++
T Consensus 189 ~-~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~ 266 (537)
T PRK13382 189 Q-RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTP-WRAEEPTVIVAPMFHAWGFSQLVLAASLACTIV 266 (537)
T ss_pred C-CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhC-CCCCCeEEEecChHhhhHHHHHHHHHhcCcEEE
Confidence 0 11234678999999999999999999999999888777666666 678899999999999999988899999999999
Q ss_pred EcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchheehccCCCCCHHHHHHHHHHcCC--ccccc
Q 045351 258 CMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQL 333 (349)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~ 333 (349)
+...+++..+++.|+++++|++.++|.+++.|.+.. . ....+++++|.+++||+++++++++.+.+.++. .+.|+
T Consensus 267 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG 345 (537)
T PRK13382 267 TRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLP-AEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYN 345 (537)
T ss_pred ECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCC-chhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEeccc
Confidence 999999999999999999999999999999998764 2 234456789999999999999999999999853 34455
Q ss_pred ccccC
Q 045351 334 CLEFG 338 (349)
Q Consensus 334 ~~~~G 338 (349)
.+|.|
T Consensus 346 ~TE~~ 350 (537)
T PRK13382 346 ATEAG 350 (537)
T ss_pred ccccC
Confidence 66655
No 25
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-39 Score=306.66 Aligned_cols=297 Identities=21% Similarity=0.258 Sum_probs=249.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ +.+ |+++|+++. ++++||+||++++.++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 5 ~~i~~~l~~~~--~~~-~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~~ 78 (513)
T PRK07656 5 MTLPELLARAA--RRF-GDKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALKA 78 (513)
T ss_pred ccHHHHHHHHH--HHC-CCCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 68999999999 889 999999997 8899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-Ccc-eEEeCCCCc----------cccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KYG-TVLLDSPEF----------EPLSATDSLDY 171 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~~-~~~~~~~~~----------~~~~~~~~~~~ 171 (349)
|++++|+++..+.+++..+++.++++++++++........ . ... ++....... .++...
T Consensus 79 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 153 (513)
T PRK07656 79 GAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAA----- 153 (513)
T ss_pred CeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhc-----
Confidence 9999999999999999999999999999998765443221 0 111 222221111 111110
Q ss_pred CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhh
Q 045351 172 YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSL 250 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l 250 (349)
...........++++++++|||||||.||+|.++|+++...+......++ +.+++++++..|++|.+|+ ..++.++
T Consensus 154 --~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (513)
T PRK07656 154 --GDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLG-LTEGDRYLAANPFFHVFGYKAGVNAPL 230 (513)
T ss_pred --CCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhC-CCCCCeEEEccchHHHHHHHHHHHHHH
Confidence 01111223457789999999999999999999999999988887777777 7899999999999999998 5678999
Q ss_pred hcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--
Q 045351 251 GMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT-- 328 (349)
Q Consensus 251 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~-- 328 (349)
..|+++++.+.+++..+++.++++++|++.++|.+++.|.+.. .....+++++|.+++||+++++++++++.+.++.
T Consensus 231 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~ 309 (513)
T PRK07656 231 MRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHP-DRSAEDLSSLRLAVTGAASMPVALLERFESELGVDI 309 (513)
T ss_pred HcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCC-CcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCc
Confidence 9999999998899999999999999999999999999999987 6666678999999999999999999999999865
Q ss_pred -cccccccccCc
Q 045351 329 -VNRQLCLEFGA 339 (349)
Q Consensus 329 -~~~~~~~~~G~ 339 (349)
.+.|+.+|.|+
T Consensus 310 ~~~~YG~tE~~~ 321 (513)
T PRK07656 310 VLTGYGLSEASG 321 (513)
T ss_pred eEeEEccccCCC
Confidence 34456677654
No 26
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4.7e-39 Score=300.50 Aligned_cols=314 Identities=22% Similarity=0.241 Sum_probs=238.4
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC--CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS--RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
.++...+.+++ +.+ ++.+|+..... .+.+||+|+++++.++|+.|.. .|+..||+|+|++.|+++|+++.+||+
T Consensus 16 ~~~~~~~~~~~--~~~-~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 16 HTLPKRLAERV--KDR-PDGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred ccHHHHHHHHh--hcC-CcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 57999999999 999 99889986543 3899999999999999999999 999779999999999999999999999
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcc-cccccccCc--c----eE-EeC---------CCCccccccccC
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDT-AHKIPQLKY--G----TV-LLD---------SPEFEPLSATDS 168 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~-~~~~~~~~~--~----~~-~~~---------~~~~~~~~~~~~ 168 (349)
.+|++.+|+.+..+.+++.++++.++++++|++... .+.+..... + .+ ..+ ...+........
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGI 171 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccc
Confidence 999999999999999999999999999999998743 222221110 0 00 000 000111111100
Q ss_pred CC--CCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHH-
Q 045351 169 LD--YYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTC- 245 (349)
Q Consensus 169 ~~--~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~- 245 (349)
.. ...........+..+||+|.|+|||||||.||||++||+|+++++...........++|++++.+|+.|++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~ 251 (613)
T COG1022 172 SLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFE 251 (613)
T ss_pred hhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHH
Confidence 00 000111112246789999999999999999999999999999999998887743689999999999999999954
Q ss_pred HHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC------CC------------------------
Q 045351 246 CLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG------GT------------------------ 295 (349)
Q Consensus 246 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~------~~------------------------ 295 (349)
....+..|+++.... ++..+++.++++++|.++++|.+|+.+.+.- ..
T Consensus 252 ~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~ 329 (613)
T COG1022 252 GGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLG 329 (613)
T ss_pred HHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 555555555555544 9999999999999999999999997764321 00
Q ss_pred ------------------CCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCceeeecCCCC
Q 045351 296 ------------------MDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGAPIISLSKQQ 348 (349)
Q Consensus 296 ------------------~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~~~i~~~~~~ 348 (349)
++... .++|.+++||+++++++...++... |...-||+||+.+.+...++++
T Consensus 330 ~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~~ 400 (613)
T COG1022 330 GGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPDR 400 (613)
T ss_pred cCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccccC
Confidence 00111 4789999999999999999999876 5555577888755444443443
No 27
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-39 Score=302.91 Aligned_cols=293 Identities=20% Similarity=0.246 Sum_probs=244.0
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
.+.+++...+ +.+ |+++|++++ ++.+||+||+++++++|+.|.++.|+.+||+|+++++|+++++++++||+++|
T Consensus 3 ~~~~~~~~~a--~~~-p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 77 (496)
T PRK06839 3 GIAYWIEKRA--YLH-PDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVE 77 (496)
T ss_pred cHHHHHHHHH--HHC-CCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 5788999999 899 999999987 89999999999999999999754799999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC-----cceEEeCCCCccccccccCCCCCCCCcccccccc
Q 045351 109 VVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK-----YGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSV 183 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
++++|+++..+.+++..+++.++++++++++.....+.... ...+.+. ++.+.... ........
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~ 146 (496)
T PRK06839 78 CIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT--SLKEIEDR---------KIDNFVEK 146 (496)
T ss_pred cEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec--chHhhhcc---------CCCCCCCC
Confidence 99999999999999999999999999999876554433211 1122221 11111111 00111234
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKF 262 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~ 262 (349)
.++++++|+|||||||.||+|.++|+++..........++ +..++++++.+|++|.+|+ ..++.++..|+++++.+.+
T Consensus 147 ~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~ 225 (496)
T PRK06839 147 NESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAID-LTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225 (496)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcC-CCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCC
Confidence 5689999999999999999999999999877666556666 6889999999999999998 5667899999999999999
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCc
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGA 339 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~ 339 (349)
++..+++.++++++|++.++|.+++.+.... .....+++++|.+++||+++++++.+.+.+.. +..+.|+.+|.|.
T Consensus 226 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~ 302 (496)
T PRK06839 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCS-KFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQGFGMTETSP 302 (496)
T ss_pred CHHHHHHHHHhhCCeEEEehHHHHHHHHhCc-ccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEeeccCCCCCc
Confidence 9999999999999999999999999999886 66667789999999999999999999998862 2334466677664
No 28
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-38 Score=301.50 Aligned_cols=295 Identities=21% Similarity=0.248 Sum_probs=243.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.++|.+++ ... ||++|+++. ++.+||+||.+++.++|++|.+ .|+++||+|+++++|+.++++++|||+++
T Consensus 2 ~~~~~~l~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (483)
T PRK03640 2 ETMPNWLKQRA--FLT-PDRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQL 75 (483)
T ss_pred CcHHHHHHHHH--HhC-CCceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhC
Confidence 58999999999 999 999999987 7999999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++..+++.++++++++++.......... .. .+.++..... ..........+++
T Consensus 76 G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~~------~~~~~~~~~~------~~~~~~~~~~~~~ 142 (483)
T PRK03640 76 GAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-SV------KFAELMNGPK------EEAEIQEEFDLDE 142 (483)
T ss_pred CcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc-cc------cHHHHhhccc------ccCCCCCCCCCCC
Confidence 999999999999999999999999999999876543322210 00 0111111100 1111122346789
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRM 267 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~ 267 (349)
+++++|||||||.||+|.+||.++...+......++ +.+++++++.+|++|.+|+..++.++..|+++++.+.+++..+
T Consensus 143 ~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~ 221 (483)
T PRK03640 143 VATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLG-LTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKI 221 (483)
T ss_pred eEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcC-CCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHH
Confidence 999999999999999999999999888776666666 7899999999999999999888899999999999999999999
Q ss_pred HHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCceeeec
Q 045351 268 LKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGAPIISL 344 (349)
Q Consensus 268 ~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~~~i~~ 344 (349)
++.++++++|++.++|.+++.|.... ... ....++|.+++||+++++++++.+.+.- +..+.|+.+|.|..++..
T Consensus 222 ~~~i~~~~~t~l~~~P~~~~~l~~~~-~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 297 (483)
T PRK03640 222 NKLLQTGGVTIISVVSTMLQRLLERL-GEG-TYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYGMTETASQIVTL 297 (483)
T ss_pred HHHHHHhCCcEEEeHHHHHHHHHhCc-Ccc-ccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeeccCccccccccc
Confidence 99999999999999999999998764 322 2346899999999999999999887742 333445566665444433
No 29
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.3e-38 Score=307.79 Aligned_cols=301 Identities=22% Similarity=0.233 Sum_probs=237.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC------CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT------ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY 101 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~------~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~ 101 (349)
.|+.++|...+ +.+ |+++|+++. ..++++||+||.+++.++|+.|++ +|+++||+|+++++|++++++++
T Consensus 25 ~t~~~~l~~~a--~~~-p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 25 ASTYELLSRAA--ARH-PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred CCHHHHHHHHH--HHC-CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHH
Confidence 58999999999 999 999999863 135799999999999999999998 99999999999999999999999
Q ss_pred HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc-----ccc----cc-Cc-ceEEeCCCCc----------
Q 045351 102 LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH-----KIP----QL-KY-GTVLLDSPEF---------- 160 (349)
Q Consensus 102 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~----~~-~~-~~~~~~~~~~---------- 160 (349)
|||+++| +++|+++.++.+++.++++.++++++++++.... .+. .. .. .++.++....
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccc
Confidence 9999999 5799999999999999999999999999865321 110 00 11 1222222110
Q ss_pred ----------cccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcE
Q 045351 161 ----------EPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAV 230 (349)
Q Consensus 161 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 230 (349)
.++....... . ...........++++++++|||||||.||+|.+||+++..........+. +.++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~-~~~~d~ 256 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQ-P-GDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLG-LGPGDT 256 (632)
T ss_pred ccccccccccCCHHHHHhcC-C-CccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcC-CCCCCE
Confidence 0010000000 0 00011112346789999999999999999999999999988877776666 688999
Q ss_pred EEEecChhhHhhH-HHHHhhhhcCCEEEEcCC--C-C---HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcc
Q 045351 231 VLCTVPYFHSYGF-TCCLRSLGMGESLVCMGK--F-D---FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSS 303 (349)
Q Consensus 231 ~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~ 303 (349)
+++.+|++|.+++ ..++.++..|+++++.++ + + ...+++.++++++|++.++|.++..|.+.+ ....++++
T Consensus 257 ~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~--~~~~~~~s 334 (632)
T PRK07529 257 VFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVP--VDGHDISS 334 (632)
T ss_pred EEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc--ccCCCccc
Confidence 9999999999998 578899999999999853 2 2 367889999999999999999999999874 33457899
Q ss_pred hheehccCCCCCHHHHHHHHHHcC--CcccccccccC
Q 045351 304 IEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 304 lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
||.+++||+++++++.+++.+.++ ..+.|+.||.|
T Consensus 335 lr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~ 371 (632)
T PRK07529 335 LRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEAT 371 (632)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccC
Confidence 999999999999999999999884 23345556654
No 30
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-38 Score=300.00 Aligned_cols=290 Identities=16% Similarity=0.161 Sum_probs=239.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
|++.+.|.+.+ +.+ |+++|+++. ++.+||.||.+++.++|+.|.+ .| .+|++|+|+++|+++++++++||+++
T Consensus 1 ~~~~~~~~~~a--~~~-p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~-~~~~~v~i~~~~~~~~~~~~la~~~~ 73 (487)
T PRK07638 1 MGITKEYKKHA--SLQ-PNKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KE-SKNKTIAILLENRIEFLQLFAGAAMA 73 (487)
T ss_pred CChHHHHHHHH--HhC-CCCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 46889999999 899 999999987 7899999999999999999998 77 48999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.+++++++++......+......++..+ .+...... ............++
T Consensus 74 G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~ 144 (487)
T PRK07638 74 GWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID--EWKRMIEK-------YLPTYAPIENVQNA 144 (487)
T ss_pred CeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh--hhhhhhhh-------ccccccccccCCCC
Confidence 9999999999999999999999999999999866555443222332222 12111111 11111111233567
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRM 267 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~ 267 (349)
+++|+|||||||.||||+++|+++...+......++ +.++|+++...|++|..++...+.+++.|+++++.+.+++..+
T Consensus 145 ~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~ 223 (487)
T PRK07638 145 PFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFH-MKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQV 223 (487)
T ss_pred cEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC-cCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHH
Confidence 899999999999999999999999998887777777 7899999999999999988888999999999999999999999
Q ss_pred HHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 268 LKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 268 ~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
++.++++++|++.++|+++..|.+.. .. ..+.+.++++|++++.++.+++.+.+|+. +.|+.+|.|.
T Consensus 224 ~~~i~~~~~t~~~~~P~~~~~l~~~~-~~----~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 293 (487)
T PRK07638 224 LDKLETENISVMYTVPTMLESLYKEN-RV----IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSF 293 (487)
T ss_pred HHHHHHcCCeEEEeCcHHHHHHHhCc-Cc----CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCc
Confidence 99999999999999999999998763 21 24455667888999999999999998643 3345666653
No 31
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-39 Score=312.11 Aligned_cols=305 Identities=17% Similarity=0.185 Sum_probs=227.7
Q ss_pred cch-hhhhhcccCCCC--CCCCCeEEEeCCC----CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSV-TSYVFSLLESHA--PPPDTTALIDTAS----RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl-~~~l~~~~~~~~--~~~~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|. .++++..+ .. . |+++|+++... .+++||+||+++++++|+.|++ +|+++||+|+++++|+++++++
T Consensus 58 ~n~~~~~l~~~~--~~~~~-~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~~e~~~~ 133 (647)
T PTZ00237 58 LNTCYNVLDIHV--KNPLK-RDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANTLEPLIA 133 (647)
T ss_pred eeHHHHHHHHhh--cccCC-CCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHH
Confidence 444 44455554 33 6 89999987421 3689999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc---------ccccc----c---CcceEEeCC-C-----
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA---------HKIPQ----L---KYGTVLLDS-P----- 158 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~----~---~~~~~~~~~-~----- 158 (349)
+|||+++|++++|+++..+.+++.++++.++++++|+++... +.+.+ . ...++.+.. .
T Consensus 134 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 213 (647)
T PTZ00237 134 MLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSES 213 (647)
T ss_pred HHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccc
Confidence 999999999999999999999999999999999999975321 10100 0 012222210 0
Q ss_pred C---------------ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhh-HHHHHhhhhccc
Q 045351 159 E---------------FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRN-LVAAVAGGHAVR 222 (349)
Q Consensus 159 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~-l~~~~~~~~~~~ 222 (349)
. +.++...... . ............++++++|+|||||||.||||+++|.+ +...........
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~ 291 (647)
T PTZ00237 214 DLKKIETIPTIPNTLSWYDEIKKIKE-N-NQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII 291 (647)
T ss_pred ccccccccCCCcccccHHHHHhhhcc-c-cCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc
Confidence 0 0000000000 0 00000112245679999999999999999999999998 444333323333
Q ss_pred cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC--CC----HHHHHHHHHhhcccEEEechHHHHHHHhcCCC-
Q 045351 223 AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK--FD----FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT- 295 (349)
Q Consensus 223 ~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~- 295 (349)
. ...++++++..|+.|+.+...++.+|+.|+++++.+. ++ +..+++.++++++|++.++|++++.|.+....
T Consensus 292 ~-~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 370 (647)
T PTZ00237 292 E-KDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEA 370 (647)
T ss_pred C-CCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccc
Confidence 3 5678999999999999877778899999999999853 22 68899999999999999999999999875301
Q ss_pred ---CCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 296 ---MDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 296 ---~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
....++++||.+++||+++++++.+++.+.++ ..+.|+.||.|.
T Consensus 371 ~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~ 419 (647)
T PTZ00237 371 TIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGI 419 (647)
T ss_pred cccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhCh
Confidence 24567899999999999999999999999884 334456677664
No 32
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.1e-38 Score=307.24 Aligned_cols=303 Identities=21% Similarity=0.270 Sum_probs=238.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|...+ +.+ |+++|+++. ++++||+||.++++++|+.|.+ +|+++||+|+|+++|++++++++|||+++
T Consensus 14 ~~~~~~l~~~~--~~~-p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 14 LTPITFLKRAS--ECY-PNRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred ccHHHHHHHHH--HhC-CCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 57889999999 889 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----------CcceEEeCCCCc-----------ccccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----------KYGTVLLDSPEF-----------EPLSA 165 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~-----------~~~~~ 165 (349)
|++++|+++..+.+++.++++.++++++|++++..+.+.+. ..+++.++.... .++..
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQ 167 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHh
Confidence 99999999999999999999999999999987655433221 123333332110 00000
Q ss_pred ccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHH
Q 045351 166 TDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTC 245 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 245 (349)
.... .. ...........++++++|+|||||||.||+|+++|+++..........+. +...++++..+|++|..|+..
T Consensus 168 ~~~~-~~-~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~l~~~pl~h~~g~~~ 244 (579)
T PLN03102 168 RGEP-TP-SLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWE-MGTCPVYLWTLPMFHCNGWTF 244 (579)
T ss_pred ccCC-CC-cccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcC-CCCCCeEEecCChhhhcchhH
Confidence 0000 00 00000011235689999999999999999999999997655444444444 567788999999999999977
Q ss_pred HHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHH
Q 045351 246 CLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQL 325 (349)
Q Consensus 246 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 325 (349)
.+.++..|+++++.+++++..+++.|+++++|++.++|.++..|.+.. .......++++.+++||+++++.+.+++.+
T Consensus 245 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~- 322 (579)
T PLN03102 245 TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGN-SLDLSPRSGPVHVLTGGSPPPAALVKKVQR- 322 (579)
T ss_pred HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCc-ccccCCcccceEEEECCCCCCHHHHHHHHH-
Confidence 788899999999998889999999999999999999999999998875 444445567888999999999999998865
Q ss_pred cC--CcccccccccCcee
Q 045351 326 NR--TVNRQLCLEFGAPI 341 (349)
Q Consensus 326 ~~--~~~~~~~~~~G~~~ 341 (349)
++ ..+.|+.+|.|+.+
T Consensus 323 ~g~~i~~~YG~tE~~~~~ 340 (579)
T PLN03102 323 LGFQVMHAYGLTEATGPV 340 (579)
T ss_pred cCCeEEeecCccccCccc
Confidence 42 33445666766433
No 33
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=8.5e-40 Score=303.26 Aligned_cols=296 Identities=26% Similarity=0.352 Sum_probs=230.5
Q ss_pred hhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEec
Q 045351 34 VFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSP 113 (349)
Q Consensus 34 l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 113 (349)
|.+++ +++ ||++|+++ +.++.+||+||+++++++|..|++ +|+++||+|+++++|+.+++++++||+++|++++|
T Consensus 1 f~~~a--~~~-pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 1 FERQA--QRY-PDRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHH--HHS-TTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred ChhHH--hhC-CCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeecccccccccccc
Confidence 35567 778 99999999 348999999999999999999997 99999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhcCCeEEEE----cCcccccccc------cCcceEEeCCCCccccccccCCCCCCCCccccccc-
Q 045351 114 CNPSCTIPEILRQIHLSKPVIAFA----THDTAHKIPQ------LKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVS- 182 (349)
Q Consensus 114 i~~~~~~~~l~~~l~~~~~~~i~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 182 (349)
+++..+.+++.++++.++++++++ +......+.. ....++.++............. .........
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 151 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSA----SLSDEPQSPE 151 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHH----HHCHCSHSTT
T ss_pred cccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccc----ccccccccCC
Confidence 999999999999999999999997 2222111111 1122444443332211100000 000000000
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh--ccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH--AVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 259 (349)
..++++++++|||||||.||+|.++|++++..+..+. ...+ +. +++++.+|++|.+|+ ..++.+++.|++++++
T Consensus 152 ~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~-~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 152 DSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFG-LG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp HTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTT-TT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CCccceeEeeccccccccccccccccccccccccccccccccc-cC--ceEEeecccccccccccccccccccccccccc
Confidence 1569999999999999999999999999999987764 2222 23 599999999999999 9999999999999999
Q ss_pred CCCC---HHHHHHHHHhhcccEEEechHHHHHHHhcCCCC----CCCCCcchheehccCCCCCHHHHHHHHHHcCC---c
Q 045351 260 GKFD---FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM----DGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT---V 329 (349)
Q Consensus 260 ~~~~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~----~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~---~ 329 (349)
+.++ +..+++.++++++|++.++|.+++.|++.. .. ...++++||.+++||+++++++.+++.+.++. .
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 307 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSP-EEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPII 307 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHH-HTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEE
T ss_pred ccccccccccchhcccccccccccccccccccccccc-cccccccccccccccccccccccCChhhccccccccccccce
Confidence 8764 477899999999999999999999999843 22 24578899999999999999999999999975 3
Q ss_pred ccccccccCceee
Q 045351 330 NRQLCLEFGAPII 342 (349)
Q Consensus 330 ~~~~~~~~G~~~i 342 (349)
+.|+.+|.|...+
T Consensus 308 ~~YG~tE~~~~~~ 320 (417)
T PF00501_consen 308 NLYGSTETGSIAT 320 (417)
T ss_dssp EEEEEGGGSSEEE
T ss_pred ecccccccceeee
Confidence 5566788876655
No 34
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-38 Score=306.23 Aligned_cols=322 Identities=24% Similarity=0.263 Sum_probs=248.3
Q ss_pred ccccceeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCE
Q 045351 7 FCSETKIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDV 86 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~ 86 (349)
++..+.....+..+...+.++.|+.+++.+.+ +++ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~-p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~ 84 (573)
T PRK05605 11 ADKPWLQSYAPWTPHDLDYGDTTLVDLYDNAV--ARF-GDRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDR 84 (573)
T ss_pred hcCCchhhcCCCCCcccCCCcCCHHHHHHHHH--HHC-CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 34444444444333333323379999999999 889 999999986 7899999999999999999998 99999999
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcc-eEEeCCCC--
Q 045351 87 AFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYG-TVLLDSPE-- 159 (349)
Q Consensus 87 V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~-~~~~~~~~-- 159 (349)
|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|++++....+.. .... ++.++...
T Consensus 85 V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 164 (573)
T PRK05605 85 VAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAM 164 (573)
T ss_pred EEEECCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccc
Confidence 9999999999999999999999999999999999999999999999999997764433221 1111 11111000
Q ss_pred -------------------------------ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeech
Q 045351 160 -------------------------------FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQ 208 (349)
Q Consensus 160 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~ 208 (349)
+.++...... ............++++++++|||||||.||+|.+||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~ 241 (573)
T PRK05605 165 PLLQRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIG---GDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTH 241 (573)
T ss_pred ccccccccccccccccccccccccCCCcceeHHHHhhcccc---ccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEec
Confidence 0000000000 000001112345789999999999999999999999
Q ss_pred hhHHHHHhhhhccccC-CCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHH
Q 045351 209 RNLVAAVAGGHAVRAA-RSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVV 286 (349)
Q Consensus 209 ~~l~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l 286 (349)
+++...+......+.. ...++++++..|++|.+|+ ..++.+++.|+++++.+.+++..+++.++++++|++.++|.++
T Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~ 321 (573)
T PRK05605 242 RNLFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLY 321 (573)
T ss_pred HHHHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHH
Confidence 9998877654332221 1357899999999999998 5677889999999999889999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccC
Q 045351 287 LKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 287 ~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
+.|.+.. .....+++++|.+++||+++++++.+++.+.++ ..+.|+.+|.|
T Consensus 322 ~~l~~~~-~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~ 374 (573)
T PRK05605 322 EKIAEAA-EERGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETS 374 (573)
T ss_pred HHHHhCc-cccCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhc
Confidence 9999886 666677899999999999999999999988774 23334556654
No 35
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-38 Score=307.10 Aligned_cols=299 Identities=20% Similarity=0.215 Sum_probs=242.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+.|...+ +++ |+++|++++ ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 37 ~tl~~~l~~~a--~~~-p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA~~~~ 110 (600)
T PRK08279 37 RSLGDVFEEAA--ARH-PDRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLGLAKL 110 (600)
T ss_pred ccHHHHHHHHH--HhC-CCCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 78999999999 999 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Cc-ceEEeCCC------CccccccccCCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KY-GTVLLDSP------EFEPLSATDSLDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~------~~~~~~~~~~~~~~~~~ 175 (349)
|++++|+++..+.+++.++++.+++++++++++..+.+... .. .++..+.. .+.++...... .. ..
T Consensus 111 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 188 (600)
T PRK08279 111 GAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAG-AP-TT 188 (600)
T ss_pred CcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhccc-CC-cc
Confidence 99999999999999999999999999999998765544321 11 12222111 11111111000 00 00
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH-HHHhhhhcCC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT-CCLRSLGMGE 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G~ 254 (349)
..........+++++|+|||||||.||||++||+++...+......++ +.+++++++.+|++|.+|+. .++.++..|+
T Consensus 189 ~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~ 267 (600)
T PRK08279 189 NPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLR-LTPDDVLYCCLPLYHNTGGTVAWSSVLAAGA 267 (600)
T ss_pred CCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcC-CCCCcEEEEecCchhhhhHHHHHHHHHhcCc
Confidence 011122346689999999999999999999999999999988877777 78999999999999999994 5557788999
Q ss_pred EEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC---ccc
Q 045351 255 SLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT---VNR 331 (349)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~---~~~ 331 (349)
++++.+.+++..+++.++++++|++.++|.+++.+.... ........++|.+ +|++++++++++|.+.++. .+.
T Consensus 268 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~-~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~ 344 (600)
T PRK08279 268 TLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQP-PKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEF 344 (600)
T ss_pred EEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCC-CCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeee
Confidence 999999999999999999999999999999999998875 4444445677764 4778999999999999864 334
Q ss_pred ccccccC
Q 045351 332 QLCLEFG 338 (349)
Q Consensus 332 ~~~~~~G 338 (349)
|+++|.|
T Consensus 345 YG~tE~~ 351 (600)
T PRK08279 345 YAASEGN 351 (600)
T ss_pred ecccccc
Confidence 5566654
No 36
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-38 Score=307.24 Aligned_cols=300 Identities=20% Similarity=0.240 Sum_probs=233.9
Q ss_pred cchh-hhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHH
Q 045351 28 TSVT-SYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYL 102 (349)
Q Consensus 28 ~tl~-~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~l 102 (349)
.|+. +.|...+ +.+ |+++|+++.. ..+.+||+||++++.++|+.|++ .|+++||+|+++++|++++++++|
T Consensus 66 ~n~~~~~l~~~~--~~~-p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~l 141 (637)
T PRK00174 66 LNVSYNCLDRHL--KTR-GDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAAVAML 141 (637)
T ss_pred eEHHHHHHHHhh--ccC-CCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3443 4566677 778 9999999742 23689999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc---------cc----cc-Cc-ceEEeCCCC--------
Q 045351 103 SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK---------IP----QL-KY-GTVLLDSPE-------- 159 (349)
Q Consensus 103 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~~----~~-~~-~~~~~~~~~-------- 159 (349)
||+++|++++|+++..+.+++.++++.++++++|+++..... +. .. .. .++..+...
T Consensus 142 A~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (637)
T PRK00174 142 ACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEG 221 (637)
T ss_pred HHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCC
Confidence 999999999999999999999999999999999997654311 00 00 11 122222111
Q ss_pred ----ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEe
Q 045351 160 ----FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCT 234 (349)
Q Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~ 234 (349)
+.++... ...........++++++|+|||||||.||||+++|++++..... ....++ +.+++++++.
T Consensus 222 ~~~~~~~~~~~-------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~-~~~~d~~~~~ 293 (637)
T PRK00174 222 RDLWWHELVAG-------ASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFD-YKDGDVYWCT 293 (637)
T ss_pred CcccHHHHHhh-------cCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccC-CCCCcEEEEc
Confidence 0000000 01111122456789999999999999999999999998765543 333344 6788999999
Q ss_pred cChhhHhhH-HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchhee
Q 045351 235 VPYFHSYGF-TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVV 307 (349)
Q Consensus 235 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i 307 (349)
.|++|..++ ..++.+|..|+++++.+. +++..+++.|+++++|++.++|++++.|++.. . ....++++||.+
T Consensus 294 ~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i 372 (637)
T PRK00174 294 ADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEG-DEHPKKYDLSSLRLL 372 (637)
T ss_pred CCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcC-CcccccCCccceeEE
Confidence 999999988 578899999999999752 48999999999999999999999999998864 3 234568899999
Q ss_pred hccCCCCCHHHHHHHHHHcCC-----cccccccccCce
Q 045351 308 ASGGAHLTLSVIRKYLQLNRT-----VNRQLCLEFGAP 340 (349)
Q Consensus 308 ~~gG~~l~~~~~~~~~~~~~~-----~~~~~~~~~G~~ 340 (349)
++||+++++++++++.+.++. .+.|+.||.|..
T Consensus 373 ~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~ 410 (637)
T PRK00174 373 GSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGI 410 (637)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCc
Confidence 999999999999999988753 344556666543
No 37
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-38 Score=303.14 Aligned_cols=304 Identities=20% Similarity=0.205 Sum_probs=241.6
Q ss_pred cchh-hhhhcccCCC-CCCCCCeEEEeCC--CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVT-SYVFSLLESH-APPPDTTALIDTA--SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~-~~l~~~~~~~-~~~~~~~ai~~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.++. +.+...+ . .+ |+++|+++.+ ..+.+||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++||
T Consensus 42 ~~~~~~~~~~~~--~~~~-~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la 117 (570)
T PRK04319 42 VNIAYEAIDRHA--DGGR-KDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFALLG 117 (570)
T ss_pred eeHHHHHHHHhh--ccCC-CCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHH
Confidence 4544 5666666 4 57 9999998752 34789999999999999999998 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc--c-Cc-ceEEeCCCCc-----cccccccCCCCCCC
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ--L-KY-GTVLLDSPEF-----EPLSATDSLDYYDD 174 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~--~-~~-~~~~~~~~~~-----~~~~~~~~~~~~~~ 174 (349)
|+++|++++|+++..+.+++.++++.+++++++++......... . .. .++.++.... .++...... .
T Consensus 118 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 193 (570)
T PRK04319 118 ALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQ----A 193 (570)
T ss_pred HHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhh----c
Confidence 99999999999999999999999999999999998765443321 1 11 2333332110 000000000 0
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcC
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMG 253 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G 253 (349)
..........++++++++|||||||.||||.++|++++..+......++ +.+++++++..|++|.+|+ ..++.++..|
T Consensus 194 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 194 SDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLD-LHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred CCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcC-CCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 1111122346789999999999999999999999999988877777776 6889999999999999987 6788999999
Q ss_pred CEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCC-CCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Cc
Q 045351 254 ESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG-TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TV 329 (349)
Q Consensus 254 ~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~ 329 (349)
+++++.. .+++..+++.|+++++|+++++|.+++.|.+... .....++++||.+++||+++++++.+++.+.++ ..
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~ 352 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIH 352 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeE
Confidence 9999885 6899999999999999999999999999987640 134566889999999999999999999999874 33
Q ss_pred ccccccccCce
Q 045351 330 NRQLCLEFGAP 340 (349)
Q Consensus 330 ~~~~~~~~G~~ 340 (349)
+.|+++|.|..
T Consensus 353 ~~YG~tE~~~~ 363 (570)
T PRK04319 353 DNWWMTETGGI 363 (570)
T ss_pred eceeecccCCE
Confidence 44566776643
No 38
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-38 Score=309.69 Aligned_cols=302 Identities=22% Similarity=0.263 Sum_probs=230.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC--C--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS--R--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~--~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.|+.+.|...+ +.+ |+++|+++.+. + +.+||+||.++++++|++|.+ .|+++||+|+++++|+++|+++++|
T Consensus 49 ~~l~~~l~~~a--~~~-pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA 124 (624)
T PRK12582 49 RSIPHLLAKWA--AEA-PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-LGLDPGRPVMILSGNSIEHALMTLA 124 (624)
T ss_pred cCHHHHHHHHH--HHC-CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHH
Confidence 58999999999 899 99999987531 1 689999999999999999998 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCH-----HHHHHHHhhcCCeEEEEcCcc--ccccc---ccCcceEEeCCCC-------ccccccc
Q 045351 104 LFSLGVVVSPCNPSCTI-----PEILRQIHLSKPVIAFATHDT--AHKIP---QLKYGTVLLDSPE-------FEPLSAT 166 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~-----~~l~~~l~~~~~~~i~~~~~~--~~~~~---~~~~~~~~~~~~~-------~~~~~~~ 166 (349)
|+++|++++|+++.++. +++.++++.++++++|+++.. ...+. ....+++..+... +.++...
T Consensus 125 ~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 204 (624)
T PRK12582 125 AMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLAAT 204 (624)
T ss_pred HHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHhhc
Confidence 99999999999999875 899999999999999997641 11111 1122333333211 1111111
Q ss_pred cCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCC---CcEEEEecChhhHhhH
Q 045351 167 DSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSR---PAVVLCTVPYFHSYGF 243 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~---~~~~l~~~p~~~~~g~ 243 (349)
... ...........++++++|+|||||||.||||++||+++...+......+. ... .++++..+|++|.+|+
T Consensus 205 ~~~----~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~~~~~~~l~~lPl~h~~g~ 279 (624)
T PRK12582 205 PPT----AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRP-REPDPPPPVSLDWMPWNHTMGG 279 (624)
T ss_pred CCc----chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhcc-ccCCCCCceEEEechHHHHHhH
Confidence 000 00001112345789999999999999999999999999987766544433 222 5799999999999998
Q ss_pred -HHHHhhhhcCCEEEEcC-CCCH---HHHHHHHHhhcccEEEechHHHHHHHhcCCCC----CCCCCcchheehccCCCC
Q 045351 244 -TCCLRSLGMGESLVCMG-KFDF---GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM----DGYDLSSIEVVASGGAHL 314 (349)
Q Consensus 244 -~~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~----~~~~l~~lr~i~~gG~~l 314 (349)
..++.++..|+++++.+ .+++ ..+++.++++++|+++++|.+++.|.+.. .. ...++++||.+++||+++
T Consensus 280 ~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~-~~~~~~~~~~~~slr~i~~gGa~l 358 (624)
T PRK12582 280 NANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAM-EKDDALRRSFFKNLRLMAYGGATL 358 (624)
T ss_pred HHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHH-hhCHHHHHHHhhheeEEEecCCCC
Confidence 55668899999999975 3443 45677889999999999999999987643 21 224578999999999999
Q ss_pred CHHHHHHHHHHc--------CCcccccccccCc
Q 045351 315 TLSVIRKYLQLN--------RTVNRQLCLEFGA 339 (349)
Q Consensus 315 ~~~~~~~~~~~~--------~~~~~~~~~~~G~ 339 (349)
++++.+++.+.+ +..+.|++||.|.
T Consensus 359 ~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~ 391 (624)
T PRK12582 359 SDDLYERMQALAVRTTGHRIPFYTGYGATETAP 391 (624)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEeccccccccc
Confidence 999999998863 2334456677654
No 39
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-38 Score=298.66 Aligned_cols=299 Identities=20% Similarity=0.217 Sum_probs=244.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+++.+.+...+ +.. |+++|+++. ++.+||.||.+++.++|..|.+ .|+++|++|+++++|+.++++++|||+++
T Consensus 2 ~~~~~~~~~~~--~~~-~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (497)
T PRK06145 2 FNLSASIAFHA--RRT-PDRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASYL 75 (497)
T ss_pred ccHHHHHHHHH--HHC-CCceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57889999999 899 999999987 7999999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.+++++++++++....... ....+.++............. ...........+++
T Consensus 76 G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 150 (497)
T PRK06145 76 GAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAAQADSRRLAQG----GLEIPPQAAVAPTD 150 (497)
T ss_pred CcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcccchhHHHhcc----CCCCCCCCCCCccc
Confidence 9999999999999999999999999999998765433221 112222221100000000000 00011112356789
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGR 266 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~ 266 (349)
+++++|||||||.||+|.+||+++..........++ +..+++++...|++|.+++ ...+.++..|+++++.+.+++..
T Consensus 151 ~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 229 (497)
T PRK06145 151 LVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALG-LTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEA 229 (497)
T ss_pred eEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC-CCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHH
Confidence 999999999999999999999999877665555566 6889999999999999999 55678899999999999999999
Q ss_pred HHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 267 MLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 267 ~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
+++.++++++|++.++|.++..|+... .....+++++|.+++||++++.++++++.+.|+.. +.|+.+|.|.
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~ll~~~-~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 304 (497)
T PRK06145 230 VLAAIERHRLTCAWMAPVMLSRVLTVP-DRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCS 304 (497)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHcCC-CccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCC
Confidence 999999999999999999999999876 55666788999999999999999999999998643 3345566554
No 40
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-38 Score=301.53 Aligned_cols=296 Identities=24% Similarity=0.270 Sum_probs=249.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ +.+ |+++|+.+. ++.+||+||++++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++
T Consensus 6 ~~l~~~l~~~~--~~~-p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~~~ 79 (521)
T PRK06187 6 LTIGRILRHGA--RKH-PDKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVPKI 79 (521)
T ss_pred CCHHHHHHHHH--HHC-CCceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 78999999999 999 999999997 6779999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC-----c-ceEEeCCCC----------ccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK-----Y-GTVLLDSPE----------FEPLSATDSLDY 171 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-----~-~~~~~~~~~----------~~~~~~~~~~~~ 171 (349)
|++++|+++..+.+++..+++.+++++++++.+..+.+.+.. . .++..+... +.++...
T Consensus 80 G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 154 (521)
T PRK06187 80 GAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAA----- 154 (521)
T ss_pred CeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhc-----
Confidence 999999999999999999999999999999987655443311 1 233322211 1111111
Q ss_pred CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhh
Q 045351 172 YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 251 (349)
............+++++++|||||||.||+|.+||+++..........++ +..++++++..|++|.+++...+.++.
T Consensus 155 --~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~l~ 231 (521)
T PRK06187 155 --ASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLK-LSRDDVYLVIVPMFHVHAWGLPYLALM 231 (521)
T ss_pred --CCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhC-CCCCCEEEEeCCchHHhhHHHHHHHHH
Confidence 11111123456688999999999999999999999999988888777777 789999999999999999977677999
Q ss_pred cCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Cc
Q 045351 252 MGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TV 329 (349)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~ 329 (349)
.|+++++++.+++..+++.++++++|.+.++|.+++.|.... .....+++++|.+++||++++.++++.+.+.++ ..
T Consensus 232 ~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~-~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~ 310 (521)
T PRK06187 232 AGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAP-RAYFVDFSSLRLVIYGGAALPPALLREFKEKFGIDLV 310 (521)
T ss_pred hCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCc-CCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchh
Confidence 999999998889999999999999999999999999999887 666677899999999999999999999999873 23
Q ss_pred ccccccccC
Q 045351 330 NRQLCLEFG 338 (349)
Q Consensus 330 ~~~~~~~~G 338 (349)
+.|+.+|.|
T Consensus 311 ~~YG~tE~~ 319 (521)
T PRK06187 311 QGYGMTETS 319 (521)
T ss_pred eeeccCccC
Confidence 334556654
No 41
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.8e-38 Score=299.99 Aligned_cols=293 Identities=20% Similarity=0.243 Sum_probs=242.6
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
++.+.+...+ +.+ |+++|+.+. ++++||++|.+++.++|+.|.+ .|+.+||+|+++++|+.+++++++||+++|
T Consensus 1 ~~~~~~~~~~--~~~-p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 1 LLHHLLEDAA--ARL-PDATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred CHHHHHHHHH--HHC-CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 3678888888 889 999999987 7899999999999999999998 999999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----C-cceEEeCCCC-----------ccccccccCCCC
Q 045351 109 VVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----K-YGTVLLDSPE-----------FEPLSATDSLDY 171 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~-~~~~~~~~~~-----------~~~~~~~~~~~~ 171 (349)
++++|+++..+.+++..+++.+++++++++....+.+... . ..++.++... +..+...
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLAL----- 149 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcc-----
Confidence 9999999999999999999999999999987654433221 1 1233333211 1111100
Q ss_pred CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhh
Q 045351 172 YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 251 (349)
...........+++++++|||||||.||+|.+||+++...+......+. +..++++++.+|++|.+|+..++.++.
T Consensus 150 ---~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~ 225 (515)
T TIGR03098 150 ---GDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLE-NRPDDRLLAVLPLSFDYGFNQLTTAFY 225 (515)
T ss_pred ---ccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhC-CCcccEEEEECchhhHhHHHHHHHHHH
Confidence 0011112345578999999999999999999999999988887777776 688999999999999999988899999
Q ss_pred cCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--
Q 045351 252 MGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV-- 329 (349)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~-- 329 (349)
.|+++++.+.+++..+++.++++++|++.++|.++..|.+.. ....+++++|.+.+||+++++++++++.+.++..
T Consensus 226 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~ 303 (515)
T TIGR03098 226 VGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLD--WPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARL 303 (515)
T ss_pred cCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcc--cCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeE
Confidence 999999999899999999999999999999999999998753 3334678999999999999999999999998543
Q ss_pred -ccccccccC
Q 045351 330 -NRQLCLEFG 338 (349)
Q Consensus 330 -~~~~~~~~G 338 (349)
..|+++|.+
T Consensus 304 ~~~YG~tE~~ 313 (515)
T TIGR03098 304 FLMYGLTEAF 313 (515)
T ss_pred eeeecccccc
Confidence 334455543
No 42
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.1e-38 Score=299.28 Aligned_cols=288 Identities=19% Similarity=0.209 Sum_probs=239.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.+...+ +.+ |+++|++++ ++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 23 ~~l~~~~~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 96 (527)
T TIGR02275 23 KPLTDILRDQA--ARY-PDAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFALLKL 96 (527)
T ss_pred CcHHHHHHHHH--HHC-CCceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 57999999999 889 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc--------ccc-c-Ccc-eEEeCCCC-ccccccccCCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK--------IPQ-L-KYG-TVLLDSPE-FEPLSATDSLDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------~~~-~-~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 175 (349)
|++++++++..+.+++.++++.++++++++++..... +.. . ... ++...... .......... ..
T Consensus 97 G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 172 (527)
T TIGR02275 97 GIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLES----PA 172 (527)
T ss_pred CeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhC----cC
Confidence 9999999999999999999999999999998653211 100 0 111 11111110 0000000000 00
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH--HHHhhhhcC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT--CCLRSLGMG 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~--~~~~~l~~G 253 (349)
.........++++++++|||||||.||+|.+||+++..++......+. +..++++++.+|++|.+++. .++.++..|
T Consensus 173 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G 251 (527)
T TIGR02275 173 EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICW-LTQQTRYLCALPAAHNYPLSSPGALGVFYAG 251 (527)
T ss_pred ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC-CCcCCEEEECCChHhhhhhhHHHHHHHHhcC
Confidence 011122456789999999999999999999999999998888777776 68899999999999999984 578999999
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 254 ESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
+++++.+.+++..+++.++++++|++.++|.+++.+.+.. .....+++++|.+++||++++.++.+++.+.++
T Consensus 252 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g 324 (527)
T TIGR02275 252 GCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAA-SKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG 324 (527)
T ss_pred CeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCc-cccCCCccceEEEEEcCCCCCHHHHHHHHHHhC
Confidence 9999998899999999999999999999999999998876 666677899999999999999999999999884
No 43
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.4e-38 Score=305.58 Aligned_cols=310 Identities=18% Similarity=0.216 Sum_probs=235.5
Q ss_pred cch-hhhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHH
Q 045351 28 TSV-TSYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYL 102 (349)
Q Consensus 28 ~tl-~~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~l 102 (349)
.|+ .+.+...+ ... |+++|+++.. ..+.+||+||.+++.++|+.|++ .|+++||+|+++++|++++++++|
T Consensus 52 ~n~~~~~l~~~~--~~~-p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~l 127 (629)
T PRK10524 52 TNLCHNAVDRHL--AKR-PEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEAAFAML 127 (629)
T ss_pred eeHHHHHHHHhh--ccC-CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHH
Confidence 454 45566667 778 9999998631 24789999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc---------ccc-------ccCcceEEeCCCCcc-cccc
Q 045351 103 SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH---------KIP-------QLKYGTVLLDSPEFE-PLSA 165 (349)
Q Consensus 103 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~-------~~~~~~~~~~~~~~~-~~~~ 165 (349)
||+++|++++|+++..+.+++.++++.++++++|+++.... .+. .....++.++..... ....
T Consensus 128 A~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 207 (629)
T PRK10524 128 ACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVA 207 (629)
T ss_pred HHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCccc
Confidence 99999999999999999999999999999999999764211 110 011223333321000 0000
Q ss_pred ccCCCCC---CC-C-ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEecChhh
Q 045351 166 TDSLDYY---DD-D-EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCTVPYFH 239 (349)
Q Consensus 166 ~~~~~~~---~~-~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~~p~~~ 239 (349)
.....+. .. . .........++++++|+|||||||.||||+++|.+++..... ....++ +.+++++++..|+.|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 286 (629)
T PRK10524 208 GRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFG-GKAGETFFCASDIGW 286 (629)
T ss_pred CCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcC-CCCCCEEEEcCCCCe
Confidence 0000000 00 0 001111346789999999999999999999999998654433 333444 678899999999999
Q ss_pred HhhH-HHHHhhhhcCCEEEEcC----CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchheehccCC
Q 045351 240 SYGF-TCCLRSLGMGESLVCMG----KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGA 312 (349)
Q Consensus 240 ~~g~-~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~ 312 (349)
..+. ..++.+|+.|+++++.+ ..++..+++.++++++|++.++|++++.|.+.. . ....++++||.+++||+
T Consensus 287 ~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~l~~lr~i~~~Ge 365 (629)
T PRK10524 287 VVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQD-PALLRKHDLSSLRALFLAGE 365 (629)
T ss_pred eccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcC-cccccccChhheeEEEEeCC
Confidence 9887 67889999999999885 347899999999999999999999999988764 2 34567899999999999
Q ss_pred CCCHHHHHHHHHHcC--CcccccccccCceeee
Q 045351 313 HLTLSVIRKYLQLNR--TVNRQLCLEFGAPIIS 343 (349)
Q Consensus 313 ~l~~~~~~~~~~~~~--~~~~~~~~~~G~~~i~ 343 (349)
++++++.+++.+.++ ..+.|+.+|.|.++++
T Consensus 366 ~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~ 398 (629)
T PRK10524 366 PLDEPTASWISEALGVPVIDNYWQTETGWPILA 398 (629)
T ss_pred CCCHHHHHHHHHhcCCCeEeccccccccchhhc
Confidence 999999999998884 3344567777654443
No 44
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.1e-38 Score=310.30 Aligned_cols=302 Identities=17% Similarity=0.158 Sum_probs=230.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC----------CCC-----------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCE
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT----------ASR-----------HRILYPDLTLRIKTLAYSLKTKYKLSKYDV 86 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~----------~~~-----------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~ 86 (349)
.|+.++|...+ +.+ ||++|+... .++ +++||+|+.++++++|+.|.+ +|+++||+
T Consensus 58 ~t~~~l~~~~~--~~~-pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd~ 133 (696)
T PLN02387 58 TTLAALFEQSC--KKY-SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEER 133 (696)
T ss_pred CCHHHHHHHHH--HHC-CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 78999999999 999 999999431 012 349999999999999999998 99999999
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----C-cceEEeCCCCc
Q 045351 87 AFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----K-YGTVLLDSPEF 160 (349)
Q Consensus 87 V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~-~~~~~~~~~~~ 160 (349)
|+|+++|+++|+++++||+++|++++|+++..+.+++.++++.++++++|++.+....+... . ..++.++....
T Consensus 134 Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~ 213 (696)
T PLN02387 134 VAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGV 213 (696)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999987654443321 1 12444443211
Q ss_pred c-----------------ccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc
Q 045351 161 E-----------------PLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA 223 (349)
Q Consensus 161 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~ 223 (349)
. ++.... ...........++|+++|+|||||||.||||++||++++..+......+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~ 287 (696)
T PLN02387 214 DSDSSLSGSSNWTVSSFSEVEKLG------KENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVP 287 (696)
T ss_pred hhhhhhhccCCcEEEEHHHHHHhh------ccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcC
Confidence 0 000000 00011122346799999999999999999999999999998877655542
Q ss_pred CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCC------C--HHHHHHHHHhhcccEEEechHHHHHHHhcCCC
Q 045351 224 ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKF------D--FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT 295 (349)
Q Consensus 224 ~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~------~--~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 295 (349)
.+.++|++++.+|++|.+++...+..+..|+++.+.... + +..++..++++++|++.++|.++++|.+.. .
T Consensus 288 ~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~-~ 366 (696)
T PLN02387 288 KLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGV-R 366 (696)
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHH-H
Confidence 267899999999999999997666677888887765432 1 234567899999999999999999886531 0
Q ss_pred CC-------------------------------C---------------CCC-cchheehccCCCCCHHHHHHHHHHcC-
Q 045351 296 MD-------------------------------G---------------YDL-SSIEVVASGGAHLTLSVIRKYLQLNR- 327 (349)
Q Consensus 296 ~~-------------------------------~---------------~~l-~~lr~i~~gG~~l~~~~~~~~~~~~~- 327 (349)
.+ . ..+ +++|.+++||+++++++.+.+...++
T Consensus 367 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~ 446 (696)
T PLN02387 367 KKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGA 446 (696)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCC
Confidence 00 0 001 58999999999999999887777664
Q ss_pred -CcccccccccCce
Q 045351 328 -TVNRQLCLEFGAP 340 (349)
Q Consensus 328 -~~~~~~~~~~G~~ 340 (349)
..+.|++||.++.
T Consensus 447 ~v~~~YG~TEt~~~ 460 (696)
T PLN02387 447 PIGQGYGLTETCAG 460 (696)
T ss_pred CeeEeechhhcccc
Confidence 3344566776543
No 45
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.3e-37 Score=297.73 Aligned_cols=303 Identities=18% Similarity=0.171 Sum_probs=245.0
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
..++.++|...+ +.+ |+++|+++. ++.+||+||.+++.++|..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 20 ~~~l~~~l~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~~~ 93 (542)
T PRK06155 20 ERTLPAMLARQA--ERY-PDRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGCAW 93 (542)
T ss_pred ccCHHHHHHHHH--HHC-CCCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 378999999999 999 999999987 7899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC------cceEEeCCCCccccccccC-CCCCCCCcccc
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK------YGTVLLDSPEFEPLSATDS-LDYYDDDEERV 179 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 179 (349)
+|++++|+++..+.+++.++++.+++++++++.+....+.... ..++.++............ ...........
T Consensus 94 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (542)
T PRK06155 94 LGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAP 173 (542)
T ss_pred hCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCC
Confidence 9999999999999999999999999999999886655443211 1233333211100000000 00000000111
Q ss_pred ccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 180 RVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 180 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
.....++++++|+|||||||.||+|.++|+++..........++ +.+++++++..|++|.+++..++.+++.|+++++.
T Consensus 174 ~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~ 252 (542)
T PRK06155 174 AAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLE-IGADDVLYTTLPLFHTNALNAFFQALLAGATYVLE 252 (542)
T ss_pred CCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcC-CCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEee
Confidence 22346789999999999999999999999999888777667676 78899999999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Cccccccccc
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEF 337 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~ 337 (349)
+++++..+++.|+++++|++.++|.++..|.+.+ .......+++|.++.|| +++++.+++.+.++ ..+.|+.+|.
T Consensus 253 ~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~ 329 (542)
T PRK06155 253 PRFSASGFWPAVRRHGATVTYLLGAMVSILLSQP-ARESDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTET 329 (542)
T ss_pred CCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCc-CccccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeeccccc
Confidence 9999999999999999999999999999998876 55566677899887655 67899999998874 3344556665
Q ss_pred Cc
Q 045351 338 GA 339 (349)
Q Consensus 338 G~ 339 (349)
|.
T Consensus 330 ~~ 331 (542)
T PRK06155 330 NF 331 (542)
T ss_pred Cc
Confidence 53
No 46
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.6e-37 Score=297.16 Aligned_cols=313 Identities=20% Similarity=0.241 Sum_probs=249.7
Q ss_pred CCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH
Q 045351 18 RPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV 97 (349)
Q Consensus 18 ~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~ 97 (349)
......++ .++.+.|...+ +.+ |+++|+++.+.++.+||+||.++++++|+.|.+ .|+++||+|+++++|++++
T Consensus 8 ~~~~~~~~--~~l~~~l~~~~--~~~-~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~ 81 (559)
T PRK08315 8 PTDVPLLE--QTIGQLLDRTA--ARY-PDREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEW 81 (559)
T ss_pred CCcCChhh--ccHHHHHHHHH--HHC-CCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHH
Confidence 33334444 79999999999 999 999999987667899999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc-----cc----cc---------------CcceE
Q 045351 98 PVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK-----IP----QL---------------KYGTV 153 (349)
Q Consensus 98 ~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~----~~---------------~~~~~ 153 (349)
++++|||+++|++++|+++..+.+++..+++.++++++++++..... +. +. ...++
T Consensus 82 ~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (559)
T PRK08315 82 VLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVI 161 (559)
T ss_pred HHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEE
Confidence 99999999999999999999999999999999999999998753211 00 00 00111
Q ss_pred EeCCC------CccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCC
Q 045351 154 LLDSP------EFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSR 227 (349)
Q Consensus 154 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 227 (349)
..+.. .+.++...... ..............++++++++|||||||.||+|.+||+++..++......++ +..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~ 239 (559)
T PRK08315 162 FLGDEKHPGMLNFDELLALGRA-VDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMK-LTE 239 (559)
T ss_pred eecccCCcccccHHHHHhhccc-cccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcC-CCC
Confidence 11111 11111100000 00000111122356788999999999999999999999999998888777777 789
Q ss_pred CcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchh
Q 045351 228 PAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIE 305 (349)
Q Consensus 228 ~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr 305 (349)
+++++...|++|.+|+ ..++.++..|+++++. ..+++..+++.++++++|++.++|.++..++... .....++++||
T Consensus 240 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~-~~~~~~~~~lr 318 (559)
T PRK08315 240 EDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHP-DFARFDLSSLR 318 (559)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCc-ccCCCCchhhh
Confidence 9999999999999998 6788999999999854 5789999999999999999999999999998876 55666789999
Q ss_pred eehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 306 VVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 306 ~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
.+++||++++.++++++.+.++.. +.|+.+|.|.
T Consensus 319 ~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 355 (559)
T PRK08315 319 TGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSP 355 (559)
T ss_pred eeEecCCCCCHHHHHHHHHHcCCcceeEEEccccccc
Confidence 999999999999999999988643 3455666543
No 47
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.6e-38 Score=301.84 Aligned_cols=293 Identities=20% Similarity=0.276 Sum_probs=234.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCC--------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASR--------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV 99 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~--------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~ 99 (349)
.|+.+.+...+ +++ |+++|+++.+.+ +.+||+||.++++++|++|.+ .|+++||+|+++++|+.++++
T Consensus 6 ~~~~~~l~~~a--~~~-p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 6 ANIARHLPRAA--QER-PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred hhHHHHHHHHH--HhC-CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHHH
Confidence 68899999999 889 999999986322 289999999999999999998 999999999999999999999
Q ss_pred HHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC--ccccccccc---Cc-ceEEeCCC------Ccccccccc
Q 045351 100 LYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH--DTAHKIPQL---KY-GTVLLDSP------EFEPLSATD 167 (349)
Q Consensus 100 ~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~--~~~~~~~~~---~~-~~~~~~~~------~~~~~~~~~ 167 (349)
+++||+++|++++|+++..+.+++.++++.+++++++++. .....+... .. .++.++.. .+.++....
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDG 161 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccC
Confidence 9999999999999999999999999999999999999865 221111110 11 12222211 111111000
Q ss_pred CCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHH
Q 045351 168 SLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCL 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~ 247 (349)
...........++++++|+|||||||.||+|++||+++...+......++ +.++++.++..|++|.+++
T Consensus 162 ------~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~pl~~~~~~---- 230 (552)
T PRK09274 162 ------AAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYG-IEPGEIDLPTFPLFALFGP---- 230 (552)
T ss_pred ------ccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhC-CCCCceeeeccCHHHhhhh----
Confidence 00111122456789999999999999999999999999998888777777 7889999999999886543
Q ss_pred hhhhcCCEEEEcC-------CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHH
Q 045351 248 RSLGMGESLVCMG-------KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIR 320 (349)
Q Consensus 248 ~~l~~G~~~v~~~-------~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~ 320 (349)
..|+++++.+ .+++..+++.|+++++|+++++|.+++.|.+.. .....++++||.+++||+++++++.+
T Consensus 231 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~~~~~~~~ 306 (552)
T PRK09274 231 ---ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYG-EANGIKLPSLRRVISAGAPVPIAVIE 306 (552)
T ss_pred ---hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHh-hhcCCCCchhhEEEecCCcCCHHHHH
Confidence 4588887764 468999999999999999999999999999876 55667889999999999999999999
Q ss_pred HHHHHcCC----cccccccccCc
Q 045351 321 KYLQLNRT----VNRQLCLEFGA 339 (349)
Q Consensus 321 ~~~~~~~~----~~~~~~~~~G~ 339 (349)
++.+.++. .+.|+++|.|.
T Consensus 307 ~~~~~~~~~~~~~~~YG~TE~~~ 329 (552)
T PRK09274 307 RFRAMLPPDAEILTPYGATEALP 329 (552)
T ss_pred HHHHHcCCCceEEccccccccce
Confidence 99999852 23455666553
No 48
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-37 Score=295.79 Aligned_cols=304 Identities=17% Similarity=0.155 Sum_probs=238.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ .++ |+++|+++.++++.+||+||.++++++|+.|.+ .|+++||+|+++++|+.++++++|||+++
T Consensus 16 ~~l~~~l~~~a--~~~-p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 91 (534)
T PRK05852 16 PRIADLVEVAA--TRL-PEAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASRA 91 (534)
T ss_pred ccHHHHHHHHH--HhC-CCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 68999999999 889 999999986556789999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc-----cCcceEEeCCCCcc-cccc-ccCCCCCCCCccccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ-----LKYGTVLLDSPEFE-PLSA-TDSLDYYDDDEERVR 180 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 180 (349)
|++++|+++..+.+++.++++.+++++++++......... ....+......... .... ....... .......
T Consensus 92 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 170 (534)
T PRK05852 92 DLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATE-PTPATST 170 (534)
T ss_pred CcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccC-CCccccc
Confidence 9999999999999999999999999999987643221111 00111111110000 0000 0000000 0000011
Q ss_pred cccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc
Q 045351 181 VSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM 259 (349)
Q Consensus 181 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 259 (349)
.....++.++++|||||||.||||.++|+++...+......+. +..+|++++..|++|.+|+ ..++.+++.|+++++.
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 249 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYR-LSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP 249 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC-CCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC
Confidence 1223567899999999999999999999999998888877777 7899999999999999999 5678899999998886
Q ss_pred C--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC--CCCCCcchheehccCCCCCHHHHHHHHHHcCCc--cccc
Q 045351 260 G--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM--DGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV--NRQL 333 (349)
Q Consensus 260 ~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~--~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~--~~~~ 333 (349)
. .+++..+++.|+++++|.++++|.++..|.+.. .. ...+.+++|.+.+||+++++++++.+.+.++.. +.|+
T Consensus 250 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG 328 (534)
T PRK05852 250 ARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERA-ATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFG 328 (534)
T ss_pred CCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhc-ccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccC
Confidence 4 578999999999999999999999999998865 32 234568999999999999999999999988532 2344
Q ss_pred ccccC
Q 045351 334 CLEFG 338 (349)
Q Consensus 334 ~~~~G 338 (349)
.+|.|
T Consensus 329 ~tE~~ 333 (534)
T PRK05852 329 MTEAT 333 (534)
T ss_pred ccccc
Confidence 55554
No 49
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-37 Score=296.78 Aligned_cols=305 Identities=21% Similarity=0.240 Sum_probs=244.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ +++ |+++|+++.+.++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 18 ~~l~~~l~~~~--~~~-p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 18 QTIGDAFDATV--ARF-PDREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred CcHHHHHHHHH--HHC-CCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 68999999999 999 999999987667899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc-----cccc-----------------c-Cc-ceEEeCCCC----
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH-----KIPQ-----------------L-KY-GTVLLDSPE---- 159 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~-----------------~-~~-~~~~~~~~~---- 159 (349)
|++++++++..+.+++.++++.++++++++++.... .+.. . .. ..+..+...
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGF 173 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccc
Confidence 999999999999999999999999999999764321 0000 0 00 011111100
Q ss_pred --ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecCh
Q 045351 160 --FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPY 237 (349)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~ 237 (349)
+......... ..............+++.++++|||||||.||+|.++|+++..++......++ +..++++++..|+
T Consensus 174 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~~~~~p~ 251 (558)
T PRK12583 174 LAWHELQARGET-VSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLG-LTEHDRLCVPVPL 251 (558)
T ss_pred cchHhhhhcccc-cccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhC-CCCCCeEEEecCc
Confidence 1111100000 00000111122345788999999999999999999999999988887777777 7889999999999
Q ss_pred hhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCC
Q 045351 238 FHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLT 315 (349)
Q Consensus 238 ~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~ 315 (349)
+|.+|. ..++.++..|+++++. ..+++..+++.++++++|++.++|.++..++... .....+++++|.+++||++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~-~~~~~~~~~lr~i~~~G~~~~ 330 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHP-QRGNFDLSSLRTGIMAGAPCP 330 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccc-cccCCCchhheEEEecCCCCC
Confidence 999998 6788899999999876 4679999999999999999999999999888775 555677899999999999999
Q ss_pred HHHHHHHHHHcCCc---ccccccccCc
Q 045351 316 LSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 316 ~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
+++.+++.+.++.. +.|+.+|.|.
T Consensus 331 ~~~~~~~~~~~~~~~i~~~YG~tE~~~ 357 (558)
T PRK12583 331 IEVMRRVMDEMHMAEVQIAYGMTETSP 357 (558)
T ss_pred HHHHHHHHHHcCCcceecccccccccc
Confidence 99999999998643 3345566553
No 50
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.7e-37 Score=297.57 Aligned_cols=304 Identities=22% Similarity=0.236 Sum_probs=241.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+++...+ +.+ |+++|+++. +++.+||+||+++++++|+.|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 23 ~~l~~~~~~~~--~~~-pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 23 ASLADYWQQTA--RAM-PDKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred CCHHHHHHHHH--HHC-CCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 57999999999 889 999999986 35899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc-----ccc----cc-Cc-ceEEeCCCCccccccccCCCCCCCCc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH-----KIP----QL-KY-GTVLLDSPEFEPLSATDSLDYYDDDE 176 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~----~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
|++++|+++..+.+++.++++.++++++++++.... .+. .. .. .++..+....................
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEP 177 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCc
Confidence 999999999999999999999999999999764311 111 11 11 22222221100000000000000000
Q ss_pred cccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCE
Q 045351 177 ERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGES 255 (349)
Q Consensus 177 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~ 255 (349)
.........+++++|+|||||||.||+|.++|.++..........++ +.+++++++..|++|.+|+ ..++.+++.|++
T Consensus 178 ~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~ 256 (547)
T PRK06087 178 LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLN-LTWQDVFMMPAPLGHATGFLHGVTAPFLIGAR 256 (547)
T ss_pred ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC-CCCCCeEEEecchHHHHHHHHHHHHHHhcCCE
Confidence 01122356789999999999999999999999999988877776666 6889999999999999998 578889999999
Q ss_pred EEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccc
Q 045351 256 LVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLC 334 (349)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~ 334 (349)
+++.+.+++..+++.+++++++++..+|.++..+++.. .....+++++|.+++||+++++++.+.+.+.. +..+.|+.
T Consensus 257 ~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~-~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~~~~l~~~YG~ 335 (547)
T PRK06087 257 SVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLL-EKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGS 335 (547)
T ss_pred EEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhcc-ccCCCCCCCeEEEEEcCCCCCHHHHHHHHHcCCcEEEEecc
Confidence 99999999999999999999999998888888888765 55566788999999999999999999877642 23344556
Q ss_pred cccC
Q 045351 335 LEFG 338 (349)
Q Consensus 335 ~~~G 338 (349)
+|.|
T Consensus 336 TE~~ 339 (547)
T PRK06087 336 TESS 339 (547)
T ss_pred cccC
Confidence 6655
No 51
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-37 Score=297.46 Aligned_cols=296 Identities=23% Similarity=0.244 Sum_probs=246.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|...+ +.+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 11 ~~l~~~l~~~a--~~~-~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~~ 84 (523)
T PRK08316 11 QTIGDILRRSA--RRY-PDKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACARA 84 (523)
T ss_pred CCHHHHHHHHH--HHC-CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57999999999 899 999999987 7999999999999999999999 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----CcceEEe-CC-------C---CccccccccCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYGTVLL-DS-------P---EFEPLSATDSLDYY 172 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~~~~~-~~-------~---~~~~~~~~~~~~~~ 172 (349)
|++++|+++..+.+++.++++.+++++++++.+....+... ....+.. .. . .+.++...
T Consensus 85 G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 158 (523)
T PRK08316 85 GAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEA------ 158 (523)
T ss_pred CcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhc------
Confidence 99999999999999999999999999999998765444321 0010000 00 0 00011100
Q ss_pred CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhh
Q 045351 173 DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLG 251 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~ 251 (349)
............+++++++|||||||.||+|.+||+++..........++ +.+++++++.+|++|..|+ ..++.++.
T Consensus 159 -~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~p~~h~~g~~~~~~~~~~ 236 (523)
T PRK08316 159 -GSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGD-MSADDIPLHALPLYHCAQLDVFLGPYLY 236 (523)
T ss_pred -CCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhC-CCCCceEEEccCCchhhhHHHHHHHHHh
Confidence 01111233466789999999999999999999999999998887777777 7899999999999999998 45667899
Q ss_pred cCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--
Q 045351 252 MGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV-- 329 (349)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~-- 329 (349)
.|+++++.+.+++..+++.++++++|++.++|.++..|.+.. .....+++++|.+++||++++.++.+.+.+.+++.
T Consensus 237 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~ 315 (523)
T PRK08316 237 VGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHP-DFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRF 315 (523)
T ss_pred cCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCc-ccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCce
Confidence 999999998889999999999999999999999999999886 66677889999999999999999999999988543
Q ss_pred -ccccccccC
Q 045351 330 -NRQLCLEFG 338 (349)
Q Consensus 330 -~~~~~~~~G 338 (349)
+.|+.+|.|
T Consensus 316 ~~~YG~tE~~ 325 (523)
T PRK08316 316 YNCYGQTEIA 325 (523)
T ss_pred eeeecccccC
Confidence 334455544
No 52
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.8e-38 Score=350.37 Aligned_cols=291 Identities=19% Similarity=0.204 Sum_probs=249.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.++|..++ .++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+|+++|++++++++|||+++
T Consensus 3095 ~~~~~l~~~~a--~~~-p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~a 3168 (3956)
T PRK12467 3095 RLVHQLIEAQV--ART-PEAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLKA 3168 (3956)
T ss_pred ccHHHHHHHHH--HhC-CCcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 68999999999 999 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-CcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|+++..+.+++.++++.+++++++++....+.+... ....+.++...... ...........++
T Consensus 3169 Ga~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 3237 (3956)
T PRK12467 3169 GGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNG-----------YSENNPSTRVMGE 3237 (3956)
T ss_pred CcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcc-----------cCCCCCcccCCCC
Confidence 99999999999999999999999999999988765544321 22233333211110 1111122346789
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC--CCH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK--FDF 264 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--~~~ 264 (349)
++++|+|||||||.||||+++|+++.+.+.+....++ +.++++++...|++|+.++..++.+|+.|+++++.+. +++
T Consensus 3238 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~ 3316 (3956)
T PRK12467 3238 NLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYE-LDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDP 3316 (3956)
T ss_pred ceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcC-CCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCH
Confidence 9999999999999999999999999999998888888 7999999999999999999999999999999999975 799
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
..+++.|+++++|++.++|++++.+.+.. ...++++||.+++||+++++++.++|.+.++.. +.|+.||.+.
T Consensus 3317 ~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~---~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 3391 (3956)
T PRK12467 3317 EELWQAIHAHRISIACFPPAYLQQFAEDA---GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVV 3391 (3956)
T ss_pred HHHHHHHHHcCCEEEEcCHHHHHHHHhcc---cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEe
Confidence 99999999999999999999999998753 234678899999999999999999999988643 4455566543
No 53
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.1e-37 Score=295.13 Aligned_cols=305 Identities=20% Similarity=0.224 Sum_probs=244.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.|+.+.+...+ ..+ |+++|++..+ .++.+||+||++++.++|+.|.+ .|+++|++|+++++|+.+++++++|
T Consensus 22 ~~~~~~~~~~~--~~~-p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 22 RTINDHFDAAV--ANC-PDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred CcHHHHHHHHH--HHC-CCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 58999999999 889 9999998621 24799999999999999999998 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc-----c---cc-c--CcceEEeCCCC---ccccccccCC
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK-----I---PQ-L--KYGTVLLDSPE---FEPLSATDSL 169 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~---~~-~--~~~~~~~~~~~---~~~~~~~~~~ 169 (349)
|+++|++++|+++..+.+++.++++.++++++++++..... . .. . ...++..+... +.........
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPER 177 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhcccc
Confidence 99999999999999999999999999999999998754211 0 00 1 11233333211 1111111000
Q ss_pred -CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHH
Q 045351 170 -DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCL 247 (349)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~ 247 (349)
...............++++++++|||||||.||||+++|+++...+......++ +..++++++.+|++|..|+ ..++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~g~~~~~~ 256 (538)
T TIGR03208 178 DDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLE-LGGGDVILMASPMAHQTGFMYGLM 256 (538)
T ss_pred ccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcC-CCCCCeEEEeCCchhHHHHHHHHH
Confidence 000000001112456789999999999999999999999999998888877777 6889999999999999988 6788
Q ss_pred hhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 248 RSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 248 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
.+++.|+++++.+.+++..+++.++++++|++.++|.++..+.... .....+++++|.+++||+++++++++++.+.++
T Consensus 257 ~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~-~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~ 335 (538)
T TIGR03208 257 MPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAV-KESGAPVPSLFTFLCAGAPIPGILVERAWELLG 335 (538)
T ss_pred HHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhch-hccCCCCCcceEEEEcCCCCCHHHHHHHHHHcC
Confidence 9999999999999899999999999999999999999999998765 444567889999999999999999999999884
Q ss_pred --CcccccccccC
Q 045351 328 --TVNRQLCLEFG 338 (349)
Q Consensus 328 --~~~~~~~~~~G 338 (349)
..+.|+.+|.|
T Consensus 336 ~~~~~~YG~tE~~ 348 (538)
T TIGR03208 336 ALIVSAWGMTENG 348 (538)
T ss_pred CeEEeeeccCcCC
Confidence 23445556654
No 54
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-37 Score=295.11 Aligned_cols=293 Identities=14% Similarity=0.098 Sum_probs=235.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCC-CCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKL-SKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.|+.+.|..++ . |+++|+++. +..+||.||.++++++|..|.+ .|+ .+||+|+++++|+++++++++||++
T Consensus 3 ~~~~~~l~~~~----~-p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~~ 74 (540)
T PRK13388 3 DTIAQLLRDRA----G-DDTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAAL 74 (540)
T ss_pred hhHHHHHHhhc----c-CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHHh
Confidence 47888887755 6 899999986 7899999999999999999998 999 7999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc---CcceEEeCCCCccccccccCCCCCCCCcccccccc
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL---KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSV 183 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
+|++++|+++..+.+++.++++.+++++++++++..+.+.+. ..+++.++...+.+..... .........
T Consensus 75 ~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~ 147 (540)
T PRK13388 75 GGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAA-------GALTPHREV 147 (540)
T ss_pred CCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccc-------cCcCCCCCC
Confidence 999999999999999999999999999999987665544332 2233444332222222111 000111235
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH-HHHhhhhcCCEEEEcCCC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT-CCLRSLGMGESLVCMGKF 262 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~G~~~v~~~~~ 262 (349)
.++++++++|||||||.||||.++|+++..........++ +..+++++..+|++|.+++. .++.+|..|+++++.+.+
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~ 226 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFG-LTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKF 226 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhC-CCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCC
Confidence 6799999999999999999999999999988877777777 78899999999999999994 445689999999999889
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
++..+++.++++++|++..+|..+..+...+ ........+++.+ + |++++++..+++.+.++ ..+.|+.+|.|.
T Consensus 227 ~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~-~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 302 (540)
T PRK13388 227 SASGFLDDVRRYGATYFNYVGKPLAYILATP-ERPDDADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAV 302 (540)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCC-CCccccccceEEE-E-CCCCCHHHHHHHHHHhCCceecccccccccc
Confidence 9999999999999999999999999998765 4332333456643 3 66778888899988874 334455666553
No 55
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.3e-37 Score=325.53 Aligned_cols=290 Identities=18% Similarity=0.190 Sum_probs=243.4
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|..++ +.+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+.++++++|||+++
T Consensus 458 ~~l~~~~~~~~--~~~-p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~~ 531 (1296)
T PRK10252 458 TTLSALVAQQA--AKT-PDAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVEA 531 (1296)
T ss_pred CCHHHHHHHHH--HhC-CCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 78999999999 999 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC-cceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK-YGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|+++..+.+++.++++.+++++++++......+.... ......+. .... ..........++
T Consensus 532 G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~ 598 (1296)
T PRK10252 532 GAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYNA-----PLAP--------QGAAPLQLSQPH 598 (1296)
T ss_pred CCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeeccc-----cccc--------ccCCCCCCCCCC
Confidence 999999999999999999999999999999887655443311 11111110 0000 000111123678
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC---CCC
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG---KFD 263 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~ 263 (349)
++++|+|||||||.||||+++|+++.+.+.+....++ +.++++++...|++|..++..++.+|+.|+++++.+ ..+
T Consensus 599 ~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~ 677 (1296)
T PRK10252 599 HTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYP-LTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRD 677 (1296)
T ss_pred CeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC-CCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCC
Confidence 9999999999999999999999999999998888888 789999999999999999999999999999999985 468
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCC--CCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMD--GYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
+..+++.++++++|++.++|+++..+++.. ... ...++++|.+++||+++++++.++|.+.++. .+.|+.||.|
T Consensus 678 ~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~-~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~ 755 (1296)
T PRK10252 678 PLAMQQFFAEYGVTTTHFVPSMLAAFVASL-TPEGARQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAA 755 (1296)
T ss_pred HHHHHHHHHHcCCeEEEeCHHHHHHHHhhh-ccccccccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhh
Confidence 999999999999999999999999988764 222 2346889999999999999999999987642 2334445544
No 56
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-37 Score=294.27 Aligned_cols=302 Identities=20% Similarity=0.203 Sum_probs=246.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+.|...+ +++ |+++|++++ ++.+||.||.+++.++|+.|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 12 ~~~~~~~~~~~--~~~-~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 12 ATYGHLLVSAL--KRY-PDRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred ccHHHHHHHHH--HHC-CCCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 68999999999 889 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCc-ccccccc----c-Cc-ceEEeCCC-CccccccccCCCCCCCCcccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHD-TAHKIPQ----L-KY-GTVLLDSP-EFEPLSATDSLDYYDDDEERV 179 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~-~~~~~~~----~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 179 (349)
|++++|+++..+.+++.++++.++++.+++++. ....... . .. .++.++.. ...+....... ......
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 161 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAK----FGPAPL 161 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhc----cCcccc
Confidence 999999999999999999999999999999875 2222111 0 01 12222211 11111111000 011111
Q ss_pred ccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 180 RVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 180 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
.....++++++++|||||||.||+|.++|.++...+......+. +..++++++..|++|.+|+. ++.+++.|+++++.
T Consensus 162 ~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~-~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~ 239 (524)
T PRK06188 162 VAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWE-WPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVL 239 (524)
T ss_pred cccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC-CCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEc
Confidence 12234567999999999999999999999999998888888777 78999999999999998874 57889999999999
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--cccccccc
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV--NRQLCLEF 337 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~--~~~~~~~~ 337 (349)
+.+++..+++.++++++|++.++|.++..|+... .....+++++|.+++||++++++..+.+.+.++.. +.|+.+|.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 318 (524)
T PRK06188 240 AKFDPAEVLRAIEEQRITATFLVPTMIYALLDHP-DLRTRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEA 318 (524)
T ss_pred CCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCc-CccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCcccc
Confidence 9999999999999999999999999999999887 66667889999999999999999999999888543 33556776
Q ss_pred Cceee
Q 045351 338 GAPII 342 (349)
Q Consensus 338 G~~~i 342 (349)
|..+.
T Consensus 319 ~~~~~ 323 (524)
T PRK06188 319 PMVIT 323 (524)
T ss_pred CCcee
Confidence 54333
No 57
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-37 Score=297.69 Aligned_cols=296 Identities=23% Similarity=0.251 Sum_probs=242.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.+.+...+ +.+ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 17 ~n~~~~~~~~a--~~~-~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~a~~~~ 90 (542)
T PRK07786 17 QNWVNQLARHA--LMQ-PDAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVLAANML 90 (542)
T ss_pred cCHHHHHHHHH--HHC-CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 78999999999 999 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Ccc-eEEeCCC------CccccccccCCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYG-TVLLDSP------EFEPLSATDSLDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~-~~~~~~~------~~~~~~~~~~~~~~~~~ 175 (349)
|++++|+++..+.+++.++++.+++++++++....+.+... ... ++..+.. .+.++... ..
T Consensus 91 G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 163 (542)
T PRK07786 91 GAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAE-------AG 163 (542)
T ss_pred CeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhc-------cC
Confidence 99999999999999999999999999999987655433221 111 2222211 11111111 01
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCE
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGES 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~ 255 (349)
..........+++++++|||||||.||+|.+||+++...+......++....++++++..|++|.+|+..++.++..|++
T Consensus 164 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~ 243 (542)
T PRK07786 164 PAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAP 243 (542)
T ss_pred CCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCE
Confidence 11112234567899999999999999999999999998887766666522578899999999999999889999999999
Q ss_pred EEEcC--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---c
Q 045351 256 LVCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---N 330 (349)
Q Consensus 256 ~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~ 330 (349)
+++.+ .+++..+++.++++++|.++++|.++..|.... .....+ .++|.+++||+++++++++.+.+.+++. +
T Consensus 244 ~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~-~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~ 321 (542)
T PRK07786 244 TVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQ-QARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILA 321 (542)
T ss_pred EEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCc-ccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEe
Confidence 99874 679999999999999999999999999998875 433333 3699999999999999999999998643 3
Q ss_pred cccccccC
Q 045351 331 RQLCLEFG 338 (349)
Q Consensus 331 ~~~~~~~G 338 (349)
.|+.+|.|
T Consensus 322 ~YG~tE~~ 329 (542)
T PRK07786 322 AFGQTEMS 329 (542)
T ss_pred eecccccc
Confidence 34556654
No 58
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-37 Score=294.50 Aligned_cols=291 Identities=17% Similarity=0.182 Sum_probs=236.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ ..+ |+++|++++ ++.+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 35 ~~~~~~~~~~a--~~~-p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 108 (516)
T PRK13383 35 TNPYTLLAVTA--ARW-PGRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVGLL 108 (516)
T ss_pred CcHHHHHHHHH--HHC-CCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 68999999999 889 999999986 6799999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.++++++++++...+.+......+..++..... .. . .. ..+...++
T Consensus 109 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----~~----~~p~~~~~ 175 (516)
T PRK13383 109 GADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAG---AE--E----SG----GRPAVAAP 175 (516)
T ss_pred CeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhh---hh--c----CC----CCCCCCCC
Confidence 999999999999999999999999999999887655544322223333211100 00 0 00 01123456
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHH--HhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAA--VAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFG 265 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~--~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~ 265 (349)
.++++|||||||.||+|.++|...... .......++ +..+++++...|++|.+|+..++.++..|+++++...+++.
T Consensus 176 ~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~ 254 (516)
T PRK13383 176 GRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTR-LRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAE 254 (516)
T ss_pred CcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhc-cCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHH
Confidence 789999999999999999999843211 112223344 57889999999999999998888899999999999889999
Q ss_pred HHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccCc
Q 045351 266 RMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFGA 339 (349)
Q Consensus 266 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G~ 339 (349)
.+++.++++++|.+.++|.++..|.... . ....+++++|.+++||++++++++++|.+.++. .+.|+.+|.|.
T Consensus 255 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~ 331 (516)
T PRK13383 255 AALAQASLHRADAFTAVPVVLARILELP-PRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGI 331 (516)
T ss_pred HHHHHHHHhCCcEEEecHHHHHHHHhcc-ccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhccccccccc
Confidence 9999999999999999999999998764 2 123457899999999999999999999998853 34455666653
No 59
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-37 Score=305.08 Aligned_cols=289 Identities=16% Similarity=0.147 Sum_probs=235.0
Q ss_pred cchhhhhhcccCCCC--CCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHA--PPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~--~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
.|+.++|...+ .. + ||++|+++. +.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+
T Consensus 4 ~~~~~~~~~~a--~~~~~-pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~ 76 (705)
T PRK06060 4 GNLAGLLAEQA--SEAGW-YDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLACL 76 (705)
T ss_pred cCHHHHHHHHH--hhccC-CCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 37888888887 64 7 899999874 479999999999999999998 999999999999999999999999999
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCC
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSL 185 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (349)
++|++++|+++..+.+++.++++.+++++++++....+.+... .++ . .......... ..........+
T Consensus 77 ~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~--~---~~~~~~~~~~-----~~~~~~~~~~~ 144 (705)
T PRK06060 77 ARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS--RVA--E---AAELMSEAAR-----VAPGGYEPMGG 144 (705)
T ss_pred HhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc--ccc--h---hhhhhhhccc-----cCCCCCCCCCC
Confidence 9999999999999999999999999999999987654433221 010 0 0011110000 00001123456
Q ss_pred CCcEEEEeccCCCCCCceeeechhhHHHHHhhhh-ccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcC-CC
Q 045351 186 SDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH-AVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMG-KF 262 (349)
Q Consensus 186 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~ 262 (349)
+++++++|||||||.||||.++|+++...+.... ..+. +...+++++..|++|.+++ ..++.+|..|+++++.+ .+
T Consensus 145 ~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~ 223 (705)
T PRK06060 145 DALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALR-LTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPV 223 (705)
T ss_pred CCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhC-CCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCC
Confidence 8999999999999999999999999988776653 3455 6788999999999999998 67889999999999986 57
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
++..++..++++++|+++++|.++..+.+.. . ..++++||.+++||+++++++.+++.+.+++. +.|+.+|.|.
T Consensus 224 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~-~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 300 (705)
T PRK06060 224 TPEAAAILSARFGPSVLYGVPNFFARVIDSC-S--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQ 300 (705)
T ss_pred CHHHHHHHHHhcCCeEEeeHHHHHHHHHHhc-c--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCc
Confidence 8999999999999999999999999998764 2 23578999999999999999999999988643 3455666653
No 60
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.2e-37 Score=301.39 Aligned_cols=302 Identities=15% Similarity=0.113 Sum_probs=228.6
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCC-----CC--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTA-----SR--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV 99 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~-----~~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~ 99 (349)
..|+.+.+...+ +.+ |+++|+.... .+ +++||+|+.++++++|+.|.+ .|+++||+|+|+++|+++|++
T Consensus 41 ~~t~~~~~~~~~--~~~-p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ew~~ 116 (660)
T PLN02430 41 ITTAWDIFSKSV--EKY-PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-SGAEPGSRVGIYGSNCPQWIV 116 (660)
T ss_pred CCCHHHHHHHHH--HhC-CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 378999999999 999 9999996421 11 358999999999999999998 999999999999999999999
Q ss_pred HHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc-ccccc----c-Cc-ceEEeCCCC-------------
Q 045351 100 LYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA-HKIPQ----L-KY-GTVLLDSPE------------- 159 (349)
Q Consensus 100 ~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~-~~~~~----~-~~-~~~~~~~~~------------- 159 (349)
+++||+++|++++|+++..+.+++.++++.++++++|+++... ..+.. . .. .++.++...
T Consensus 117 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 196 (660)
T PLN02430 117 AMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVK 196 (660)
T ss_pred HHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcE
Confidence 9999999999999999999999999999999999999986432 11111 0 11 133333211
Q ss_pred ---ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---c-cCCCCCcEEE
Q 045351 160 ---FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---R-AARSRPAVVL 232 (349)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~-~~~~~~~~~l 232 (349)
+.++..... ..........++++++|+|||||||.||||++||+++...+...... + ..+..+++++
T Consensus 197 ~~~~~~~~~~~~------~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~l 270 (660)
T PLN02430 197 TYSWIDFLHMGK------ENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYL 270 (660)
T ss_pred EEEHHHHHHhhc------cCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEE
Confidence 001110000 00011123467899999999999999999999999999887664322 1 1256889999
Q ss_pred EecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC-------CC----------
Q 045351 233 CTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-------GT---------- 295 (349)
Q Consensus 233 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-------~~---------- 295 (349)
+.+|++|.++....+.++..|+++++... ++..+++.|+++++|++.++|.+++.+.+.. ..
T Consensus 271 s~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 349 (660)
T PLN02430 271 SFLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALY 349 (660)
T ss_pred EeCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999666678899999988754 7889999999999999999999998886521 00
Q ss_pred ----------------CCCCC----------C-cchheehccCCCCCHHHHHHHHHHcC---CcccccccccCce
Q 045351 296 ----------------MDGYD----------L-SSIEVVASGGAHLTLSVIRKYLQLNR---TVNRQLCLEFGAP 340 (349)
Q Consensus 296 ----------------~~~~~----------l-~~lr~i~~gG~~l~~~~~~~~~~~~~---~~~~~~~~~~G~~ 340 (349)
....+ + +++|.+++||+++++++.+.+ +.++ ..+.|++||.++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~~~~i~~~YG~TE~~~~ 423 (660)
T PLN02430 350 KYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTSCAFVVQGYGLTETLGP 423 (660)
T ss_pred HHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhcCCCeeeecchhhhhhc
Confidence 00000 1 589999999999999986554 4543 2344667776543
No 61
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.6e-37 Score=346.83 Aligned_cols=293 Identities=19% Similarity=0.207 Sum_probs=247.4
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|..++ +.+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||+++
T Consensus 1574 ~~~~~~~~~~a--~~~-p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlka 1647 (3956)
T PRK12467 1574 RLVHQLIEDQA--AAT-PEAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILKA 1647 (3956)
T ss_pred ccHHHHHHHHH--HhC-CCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhcc
Confidence 68999999999 999 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-CcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|++|..+.+++.++++++++++++++......+... ...++.++... ..... ...........++
T Consensus 1648 G~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~ 1718 (3956)
T PRK12467 1648 GGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED--DWLEG-------YSDSNPAVNLAPQ 1718 (3956)
T ss_pred CceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc--chhcc-------CCCCCCCCCCCCc
Confidence 99999999999999999999999999999987665544321 22333333211 11111 1111122345678
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC---CCC
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG---KFD 263 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~ 263 (349)
+.++|+|||||||.||||+++|+++.+.+.+....++ +..+++++...|++|+.+++.++.+|+.|+++++.+ ..+
T Consensus 1719 ~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~ 1797 (3956)
T PRK12467 1719 NLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQ-LSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRD 1797 (3956)
T ss_pred CcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcC-CCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCC
Confidence 9999999999999999999999999999988888887 789999999999999999999999999999999985 358
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
+..+++.|+++++|++.++|++++.|.+.. ....++++||.+++||+++++++.++|.+.++.. +.||.||.+
T Consensus 1798 ~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~--~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 1873 (3956)
T PRK12467 1798 PEQLIQLIERQQVTTLHFVPSMLQQLLQMD--EQVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETA 1873 (3956)
T ss_pred HHHHHHHHHHcCCeEEECCHHHHHHHHhhc--cccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCE
Confidence 999999999999999999999999998752 2334578999999999999999999999988643 334445543
No 62
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.2e-37 Score=306.95 Aligned_cols=301 Identities=15% Similarity=0.126 Sum_probs=235.5
Q ss_pred cchhhhhhcccCCCCCCCC-CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPD-TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~-~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.|+.+.|...+ .++ |+ ++|+.+. ..+.+||+||.++++++|++|.+ . +++||+|+++++|++++++++|||++
T Consensus 204 ~t~~~~l~~~~--~~~-p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~~~ 277 (718)
T PRK08043 204 ETLYEALLSAQ--YRY-GAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGASL 277 (718)
T ss_pred CCHHHHHHHHH--HHh-CCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 68999999999 889 87 6888753 24789999999999999999998 6 59999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccc--cc-----CcceEEeCCC-CccccccccCCCCCCCCccc
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIP--QL-----KYGTVLLDSP-EFEPLSATDSLDYYDDDEER 178 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~--~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 178 (349)
+|++++|+++..+.+++.++++.+++++++++++..+... .. ....+.++.. ....................
T Consensus 278 ~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (718)
T PRK08043 278 RRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPRL 357 (718)
T ss_pred cCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999876543211 10 1112222210 00000000000000000000
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEE
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLV 257 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v 257 (349)
......++++++++|||||||.||||++||+++...+......++ +..+|++++.+|++|.+|+ ..++.++..|++++
T Consensus 358 ~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv 436 (718)
T PRK08043 358 AQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIAD-FTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVF 436 (718)
T ss_pred ccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhC-CCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEE
Confidence 112346789999999999999999999999999998877776666 7899999999999999998 56789999999999
Q ss_pred EcCC-CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Ccccccc
Q 045351 258 CMGK-FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLC 334 (349)
Q Consensus 258 ~~~~-~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~ 334 (349)
+.+. +++..+++.+.++++|++..+|.++..+.+.. ...++++||.+++||+++++++.+.+.+.++ ..+.|+.
T Consensus 437 ~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~ 513 (718)
T PRK08043 437 LYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA---NPYDFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGV 513 (718)
T ss_pred EeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc---CcccccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCc
Confidence 8864 67788999999999999999999998876542 3356789999999999999999999999884 2344556
Q ss_pred cccC
Q 045351 335 LEFG 338 (349)
Q Consensus 335 ~~~G 338 (349)
||.+
T Consensus 514 TE~~ 517 (718)
T PRK08043 514 TECA 517 (718)
T ss_pred cccc
Confidence 6654
No 63
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.7e-37 Score=292.34 Aligned_cols=292 Identities=17% Similarity=0.174 Sum_probs=243.6
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
++.+.+...+ ... |+++|+.+. ++.+||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++|
T Consensus 1 ~~~~~l~~~a--~~~-p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 74 (502)
T TIGR01734 1 KLIEAIQAFA--ETY-PQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKSG 74 (502)
T ss_pred CHHHHHHHHH--HHC-CCceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHhC
Confidence 4678888889 889 999999886 7899999999999999999998 999999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCc
Q 045351 109 VVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDP 188 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
++++|+++..+.+++.++++..++++++++++........ ..+.++. ....... ...........+++.
T Consensus 75 ~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~--~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~ 143 (502)
T TIGR01734 75 HAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGT--QIITLSA--LEQAETS-------GGPVSFDHAVKGDDN 143 (502)
T ss_pred CEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccCC--ceEEchH--hhhhhhh-------cCCccccccCCCCCe
Confidence 9999999999999999999999999999987654433221 1222211 1111111 011111223567899
Q ss_pred EEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---CCHH
Q 045351 189 AAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK---FDFG 265 (349)
Q Consensus 189 ~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~~ 265 (349)
++++|||||||.||+|.++|+++...+.+....++ ...+++++...|++|..++..++.++..|+++++.++ +++.
T Consensus 144 ~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 222 (502)
T TIGR01734 144 YYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFP-LSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFK 222 (502)
T ss_pred EEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCC-CCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHH
Confidence 99999999999999999999999998888777777 6889999999999999999889999999999999864 5889
Q ss_pred HHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcc---cccccccCc
Q 045351 266 RMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVN---RQLCLEFGA 339 (349)
Q Consensus 266 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~---~~~~~~~G~ 339 (349)
.+++.+++++++.+.++|.+++.+.... ......+++++.+++||++++.++.+++.+.+++.. .|+.+|.|.
T Consensus 223 ~~~~~i~~~~~~~~~~~p~~~~~~l~~~-~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 298 (502)
T TIGR01734 223 LLFEELPKTGLNVWVSTPSFVDMCLLDP-NFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATV 298 (502)
T ss_pred HHHHHHHHcCCeEEEEChhHHHHHHhcc-ccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceE
Confidence 9999999999999999999998887665 445567889999999999999999999999997543 245566543
No 64
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-37 Score=302.42 Aligned_cols=282 Identities=17% Similarity=0.220 Sum_probs=226.5
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCC-------CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTA-------SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV 99 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~ 99 (349)
..|+.+.|...+ +.+ |+++|+++.+ ..+.+||+||.++++++|+.|.+ . +++||+|+++++|++++++
T Consensus 20 ~~~l~~~l~~~a--~~~-~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 20 NTNLVRHVERWA--KVR-GDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred cCCHHHHHHHHH--HhC-CCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEEcCCChHHHH
Confidence 368999999999 889 9999998631 12689999999999999999998 6 8999999999999999999
Q ss_pred HHHHHHhcCCeEecC-CCCCC--HHHHHHHHhhcCCeEEEEcCcccccccc----c----CcceEEeCCCCccccccccC
Q 045351 100 LYLSLFSLGVVVSPC-NPSCT--IPEILRQIHLSKPVIAFATHDTAHKIPQ----L----KYGTVLLDSPEFEPLSATDS 168 (349)
Q Consensus 100 ~~lA~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~ 168 (349)
+++||+++|++++|+ ++..+ .+++.++++.+++++++++++..+.+.. . ...++..+. .....
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---- 168 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA--VPDEV---- 168 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc--ccccc----
Confidence 999999999999999 45554 6889999999999999998765433221 0 011222211 00000
Q ss_pred CCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHh
Q 045351 169 LDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLR 248 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 248 (349)
..........++++++|+|||||||.||||++||+++...+......++ +..++++++.+|++|.+|+..++.
T Consensus 169 ------~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~Pl~h~~gl~~~~~ 241 (631)
T PRK07769 169 ------GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALE-GQEGDRGVSWLPFFHDMGLITVLL 241 (631)
T ss_pred ------ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcC-CCCcceEEEeCCCcCchhhHHHHH
Confidence 0000111346789999999999999999999999999988877777776 688999999999999999977788
Q ss_pred hhhcCCEEEEcCC--C--CHHHHHHHHHhhcc---cEEEechHHHHHHHhcCC--C--CCCCCCcchheehccCCCCCHH
Q 045351 249 SLGMGESLVCMGK--F--DFGRMLKAVEEFRV---SHVVLAPPVVLKMARDGG--T--MDGYDLSSIEVVASGGAHLTLS 317 (349)
Q Consensus 249 ~l~~G~~~v~~~~--~--~~~~~~~~i~~~~~---t~l~~~P~~l~~l~~~~~--~--~~~~~l~~lr~i~~gG~~l~~~ 317 (349)
+++.|++++++++ + ++..+++.+.++++ +.+..+|.++..+..... . ....++++||.+++||++++++
T Consensus 242 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~ 321 (631)
T PRK07769 242 PALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPA 321 (631)
T ss_pred HHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHH
Confidence 8889999998853 4 89999999999986 789999998877765310 1 1245789999999999999999
Q ss_pred HHHHHHHHc
Q 045351 318 VIRKYLQLN 326 (349)
Q Consensus 318 ~~~~~~~~~ 326 (349)
+.++|.+.|
T Consensus 322 ~~~~~~~~~ 330 (631)
T PRK07769 322 SMRKFNEAF 330 (631)
T ss_pred HHHHHHHHH
Confidence 999999987
No 65
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-36 Score=292.40 Aligned_cols=305 Identities=20% Similarity=0.297 Sum_probs=235.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+.|...+ +.+ |+++|+++. ++.+||+||.+++.++|+.|.+..|+++||+|+++++|++++++++|||+++
T Consensus 24 ~~~~~~l~~~a--~~~-p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~ 98 (562)
T PRK05677 24 PNIQAVLKQSC--QRF-ADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRA 98 (562)
T ss_pred CcHHHHHHHHH--HhC-CCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 58999999999 889 999999986 7899999999999999999986259999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeCC-CCccc----c--------cccc-C-
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLDS-PEFEP----L--------SATD-S- 168 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~-~~~~~----~--------~~~~-~- 168 (349)
|++++|+++..+.+++.++++.++++++++++.....+.+ .+.+.+.+.. .+... . .... .
T Consensus 99 Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK05677 99 GLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPA 178 (562)
T ss_pred CeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccc
Confidence 9999999999999999999999999999998765433221 1122222111 00000 0 0000 0
Q ss_pred ------CCCC----C-CCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc-CCC-CCcEEEEec
Q 045351 169 ------LDYY----D-DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA-ARS-RPAVVLCTV 235 (349)
Q Consensus 169 ------~~~~----~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~-~~~~~l~~~ 235 (349)
..+. . ...........++++++++|||||||.||||+++|+++...+......+. .+. ..+++++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK05677 179 YHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPL 258 (562)
T ss_pred cCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcC
Confidence 0000 0 00011122346789999999999999999999999999887665444332 022 346889999
Q ss_pred ChhhHhhH-HHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCC
Q 045351 236 PYFHSYGF-TCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAH 313 (349)
Q Consensus 236 p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~ 313 (349)
|++|.+|+ ..++..+..|++.++.+ .+++..+++.|+++++|+++++|.++..+.... .....+++++|.+++||++
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~v~~gG~~ 337 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNE-AFRKLDFSALKLTLSGGMA 337 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCc-ccccCChhhceEEEEcCcc
Confidence 99999998 57778888898877664 579999999999999999999999999998765 4455667899999999999
Q ss_pred CCHHHHHHHHHHcC--CcccccccccC
Q 045351 314 LTLSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 314 l~~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
+++++.+.|.+.++ ..+.|+.+|.|
T Consensus 338 ~~~~~~~~~~~~~~~~v~~~YG~tE~~ 364 (562)
T PRK05677 338 LQLATAERWKEVTGCAICEGYGMTETS 364 (562)
T ss_pred CCHHHHHHHHHHcCCCeeccCCccccC
Confidence 99999999999874 33445556654
No 66
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=8.7e-37 Score=297.39 Aligned_cols=297 Identities=18% Similarity=0.182 Sum_probs=223.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC---CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS---RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~---~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.|+.+.+.+. . ++++|+++... .+.+||+||.+++.++|+.|++ .|+++||+|+++++|++++++++|||
T Consensus 87 ~n~~~~~~~~-----~-~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~~~~lA~ 159 (652)
T TIGR01217 87 LNYAENLLRA-----A-GTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAVVAMLAT 159 (652)
T ss_pred eeHHHHHhcc-----C-CCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 5666665553 3 67888877422 2689999999999999999998 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc---------cccc----ccC--cceEEeCCCC----------
Q 045351 105 FSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA---------HKIP----QLK--YGTVLLDSPE---------- 159 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~----~~~--~~~~~~~~~~---------- 159 (349)
+++|++++|+++.++.+++.++++.++++++|+++... +.+. ... ..++.++...
T Consensus 160 ~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (652)
T TIGR01217 160 ASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKID 239 (652)
T ss_pred HHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccccccc
Confidence 99999999999999999999999999999999986532 1111 111 1123222100
Q ss_pred ----ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHH-HhhhhccccCCCCCcEEEEe
Q 045351 160 ----FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAA-VAGGHAVRAARSRPAVVLCT 234 (349)
Q Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 234 (349)
+.++.... ............+++++|+|||||||.||||+++|++++.. .......++ +.++|++++.
T Consensus 240 ~~~~~~~~~~~~------~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~~~~ 312 (652)
T TIGR01217 240 GALDLEDFTAAA------QAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCD-LGPGDRLFYY 312 (652)
T ss_pred CcccHHHHHhcc------cCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccC-CCCCcEEEEe
Confidence 01111000 00011112345689999999999999999999999997643 333444455 6889999999
Q ss_pred cChhhHhhHHHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehc
Q 045351 235 VPYFHSYGFTCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVAS 309 (349)
Q Consensus 235 ~p~~~~~g~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~ 309 (349)
.|+.|+.+ ..++.+|+.|+++++.+. .++..+++.++++++|++..+|.++..+.... ......++++||.+++
T Consensus 313 ~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~ 391 (652)
T TIGR01217 313 TTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAS 391 (652)
T ss_pred CCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEe
Confidence 99999764 345689999999999852 27899999999999999988887777766532 0234567899999999
Q ss_pred cCCCCCHHHHHHHHHHcCCcccccccccCce
Q 045351 310 GGAHLTLSVIRKYLQLNRTVNRQLCLEFGAP 340 (349)
Q Consensus 310 gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~~ 340 (349)
||+++++++++++.+.++. .+...++||++
T Consensus 392 gGe~l~~~~~~~~~~~~~~-~~~~~~~yG~T 421 (652)
T TIGR01217 392 TGSPLPPDGFRWVYDEIKA-DVWLASISGGT 421 (652)
T ss_pred ecCCCCHHHHHHHHHHhCC-CceEEeccCHH
Confidence 9999999999999998853 23344555544
No 67
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-37 Score=303.72 Aligned_cols=300 Identities=15% Similarity=0.129 Sum_probs=227.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-------------------------CCceeeHHHHHHHHHHHHHHHhhhcCCC
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-------------------------SRHRILYPDLTLRIKTLAYSLKTKYKLS 82 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-------------------------~~~~~Ty~~l~~~~~~~a~~L~~~~g~~ 82 (349)
.|+.+.|...+ +.+ |+++|+.+.. ..+++||+||.++++++|+.|.+ +|++
T Consensus 69 ~t~~~~~~~~~--~~~-p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~Gv~ 144 (700)
T PTZ00216 69 PNFLQRLERIC--KER-GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LGLT 144 (700)
T ss_pred CCHHHHHHHHH--HhC-CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hCCC
Confidence 68999999999 999 9999998731 25799999999999999999998 9999
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc-------cCcceEEe
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ-------LKYGTVLL 155 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~ 155 (349)
+||+|+|+++|+++|+++++||+++|++++|+++..+.+++.++++.++++++|++......+.. ....++.+
T Consensus 145 ~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~ 224 (700)
T PTZ00216 145 KGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYL 224 (700)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998754332211 11234444
Q ss_pred CCCC------------ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc-
Q 045351 156 DSPE------------FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR- 222 (349)
Q Consensus 156 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~- 222 (349)
+... +.++...... ............++++++|+|||||||.||||++||+|+++.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~ 301 (700)
T PTZ00216 225 DSLPASVDTEGCRLVAWTDVVAKGHS---AGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLN 301 (700)
T ss_pred CCCccccccCCceEEEHHHHHHhCCc---cccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcc
Confidence 3211 1111111000 00111112345689999999999999999999999999999877655433
Q ss_pred ---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHH-------HHHhhcccEEEechHHHHHHHhc
Q 045351 223 ---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLK-------AVEEFRVSHVVLAPPVVLKMARD 292 (349)
Q Consensus 223 ---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~l~~~P~~l~~l~~~ 292 (349)
..+..++++++.+|++|.+++......+..|+++++. ++..+.+ .++++++|++.++|.+++.+.+.
T Consensus 302 ~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~ 378 (700)
T PTZ00216 302 DLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKA 378 (700)
T ss_pred cccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHH
Confidence 2135789999999999999986556667888887764 4555554 68899999999999999887643
Q ss_pred CCCC-------------------------CCC----------------CCcchheehccCCCCCHHHHHHHHHHcC-Ccc
Q 045351 293 GGTM-------------------------DGY----------------DLSSIEVVASGGAHLTLSVIRKYLQLNR-TVN 330 (349)
Q Consensus 293 ~~~~-------------------------~~~----------------~l~~lr~i~~gG~~l~~~~~~~~~~~~~-~~~ 330 (349)
. .. .+. ..+++|.+++||+++++++.+.+...++ ..+
T Consensus 379 ~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~~l~~ 457 (700)
T PTZ00216 379 V-EAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFGMVIQ 457 (700)
T ss_pred H-HHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhhhHhh
Confidence 1 00 000 0157999999999999999887776653 223
Q ss_pred cccccccC
Q 045351 331 RQLCLEFG 338 (349)
Q Consensus 331 ~~~~~~~G 338 (349)
.|+.||.+
T Consensus 458 ~YG~TEt~ 465 (700)
T PTZ00216 458 GWGLTETV 465 (700)
T ss_pred ccCccccc
Confidence 34556654
No 68
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.3e-36 Score=288.60 Aligned_cols=297 Identities=22% Similarity=0.251 Sum_probs=242.4
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+++.+++ .+ |+++|+.+. +++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~l~~~~~~~~---~~-~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~~ 76 (504)
T PRK07514 3 NNLFDALRAAF---AD-RDAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLRA 76 (504)
T ss_pred ccHHHHHHHHh---hC-CCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 57888888877 34 789999874 37899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----Ccc-eEEeCCCCccccccccCCCCCCCCccccccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYG-TVLLDSPEFEPLSATDSLDYYDDDEERVRVS 182 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (349)
|++++|+++..+.+++..+++.++++++++++.....+... ... ++.++......+...... .........
T Consensus 77 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 152 (504)
T PRK07514 77 GAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAA----APDDFETVP 152 (504)
T ss_pred CcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhh----cCcccCccc
Confidence 99999999999999999999999999999987655443321 111 233332111111111000 111112234
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCC
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGK 261 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~ 261 (349)
..++++++++|||||||.||+|.++|+++...+......++ +.+++++++..|++|..|+ ..++.+++.|+++++.+.
T Consensus 153 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 231 (504)
T PRK07514 153 RGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWR-FTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPK 231 (504)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhC-CCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCC
Confidence 56789999999999999999999999999999887777777 6889999999999999998 577899999999999999
Q ss_pred CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 262 FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
+++..+++.+ +++|++.++|.++.+++... ......++++|.+++||+++++++++.+.+.++. .+.|+.+|.|
T Consensus 232 ~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 307 (504)
T PRK07514 232 FDPDAVLALM--PRATVMMGVPTFYTRLLQEP-RLTREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETN 307 (504)
T ss_pred CCHHHHHHHH--HhheeeecHHHHHHHHHcCC-CCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeeccccccc
Confidence 9999999999 47999999999999998876 5666678899999999999999999999998843 3334555544
No 69
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.4e-37 Score=349.21 Aligned_cols=292 Identities=17% Similarity=0.183 Sum_probs=247.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.++|..++ +++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||+++
T Consensus 511 ~~~~~~~~~~a--~~~-p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~a 584 (5163)
T PRK12316 511 RGVHRLFEEQV--ERT-PEAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILKA 584 (5163)
T ss_pred CCHHHHHHHHH--HHC-CCCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 68999999999 999 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-CcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|++|..+.+++.++++.+++++++++......+... ...++.++... ..... ...........++
T Consensus 585 G~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~ 655 (5163)
T PRK12316 585 GGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA--AWLEG-------YSEENPGTELNPE 655 (5163)
T ss_pred CCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc--hhhcc-------CCCCCCCCCCCCC
Confidence 99999999999999999999999999999987665444321 22333333211 11111 0111122245678
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC---CCC
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG---KFD 263 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~ 263 (349)
++++|+|||||||.||||+++|+++.+.+.+....++ +..+++++...|++|+.++..++.+|+.|+++++.+ .++
T Consensus 656 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~ 734 (5163)
T PRK12316 656 NLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYG-LGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRD 734 (5163)
T ss_pred CeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcC-CCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCC
Confidence 9999999999999999999999999999999888888 789999999999999999999999999999999984 479
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
+..+++.++++++|++.++|++++.|.+.. . ..+++++|.+++||+++++++.+++.+.+++. +.||.||.+
T Consensus 735 ~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~-~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 809 (5163)
T PRK12316 735 PAKLVELINREGVDTLHFVPSMLQAFLQDE-D--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAA 809 (5163)
T ss_pred HHHHHHHHHHcCCeEEEeCHHHHHHHHhcc-c--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChhe
Confidence 999999999999999999999999998764 2 23578999999999999999999998887643 334445544
No 70
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-36 Score=296.84 Aligned_cols=297 Identities=18% Similarity=0.160 Sum_probs=226.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC---CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS---RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~---~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.|+.+.+.++ .. |+++|+++.+. .+.+||+||.+++.++|+.|++ .|+++||+|+++++|++++++++|||
T Consensus 86 ~n~~~~~~~~----~~-~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~v~~~lA~ 159 (655)
T PRK03584 86 LNYAENLLRH----RR-DDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIPETVVAMLAT 159 (655)
T ss_pred eeHHHHhhcc----CC-CCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4566555542 36 89999997521 2689999999999999999998 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc---------cc----cc-C-cceEEeCCCC----------
Q 045351 105 FSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK---------IP----QL-K-YGTVLLDSPE---------- 159 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~~----~~-~-~~~~~~~~~~---------- 159 (349)
+++|++++|+++..+.+++.++++.++++++++++..... +. .. . ..++.++...
T Consensus 160 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (655)
T PRK03584 160 ASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPG 239 (655)
T ss_pred HHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCC
Confidence 9999999999999999999999999999999997653211 00 01 1 1122222110
Q ss_pred ---ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHH-HhhhhccccCCCCCcEEEEec
Q 045351 160 ---FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAA-VAGGHAVRAARSRPAVVLCTV 235 (349)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 235 (349)
+.++.... ............+++++|+|||||||.||||++||++++.. .......++ +.++|++++..
T Consensus 240 ~~~~~~~~~~~------~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~~~~~ 312 (655)
T PRK03584 240 ALLWEDFLAPA------EAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCD-LGPGDRFFWYT 312 (655)
T ss_pred cccHHHHhhcc------ccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcC-CCCCCEEEEcC
Confidence 11111000 01111122456789999999999999999999999987644 444455555 68899999999
Q ss_pred ChhhHhhHHHHHhhhhcCCEEEEcC----CCCHHHHHHHHHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehcc
Q 045351 236 PYFHSYGFTCCLRSLGMGESLVCMG----KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVASG 310 (349)
Q Consensus 236 p~~~~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~g 310 (349)
++.|..+. .++.+|+.|+++++.+ .+++..+++.++++++|++.++|.+++.|.+.. ......++++||.+++|
T Consensus 313 ~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~ 391 (655)
T PRK03584 313 TCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGST 391 (655)
T ss_pred CchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEe
Confidence 99887543 4678999999999985 258999999999999999999999999988753 02245678999999999
Q ss_pred CCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 311 GAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 311 G~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
|+++++++++++.+.++. .+.+.+.||+
T Consensus 392 Ge~l~~~~~~~~~~~~~~-~~~~~~~yG~ 419 (655)
T PRK03584 392 GSPLPPEGFDWVYEHVKA-DVWLASISGG 419 (655)
T ss_pred cCCCCHHHHHHHHHHhCC-CceEEeccCh
Confidence 999999999999998842 2234444443
No 71
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-36 Score=290.72 Aligned_cols=304 Identities=18% Similarity=0.219 Sum_probs=236.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC--CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA--SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
+|+.+++...+ +.+ |+++++++.. ..+++||+||.++++++|++|.+ .|+++||+|+++++|+.+++++++||+
T Consensus 10 ~~~~~~~~~~a--~~~-~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~la~~ 85 (542)
T PRK06018 10 LLCHRIIDHAA--RIH-GNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAWYGIM 85 (542)
T ss_pred CCHHHHHHHHH--HhC-CCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 69999999999 899 9999998531 24789999999999999999999 999999999999999999999999999
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Ccc-eEEeCCCC-cccccc----ccCCCCCCC
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYG-TVLLDSPE-FEPLSA----TDSLDYYDD 174 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~-~~~~~~~~-~~~~~~----~~~~~~~~~ 174 (349)
++|++++|+++..+.+++.++++.+++++++++.+..+.+.+. ... ++...... ...... .........
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (542)
T PRK06018 86 GIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEA 165 (542)
T ss_pred hcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccC
Confidence 9999999999999999999999999999999988655443221 111 22221110 000000 000000000
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHH-HHH-hhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhc
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLV-AAV-AGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGM 252 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~-~~~-~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 252 (349)
..........++++++|+|||||||.||+|.+||++.+ ... ......++ +..+++++...|++|.+++...+.++..
T Consensus 166 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~p~~h~~~~~~~~~~~~~ 244 (542)
T PRK06018 166 DGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALG-TSAADTMLPVVPLFHANSWGIAFSAPSM 244 (542)
T ss_pred CcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcC-CCCCCEEEEecCHHHHhhhHHHHhhhhc
Confidence 00111123466789999999999999999999999753 222 22334455 6888999999999999999777788999
Q ss_pred CCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Cc
Q 045351 253 GESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TV 329 (349)
Q Consensus 253 G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~ 329 (349)
|+++++.. .+++..+++.++++++|++.++|.+++.|.+.. .....+++++|.+++||+++++++++++.+ ++ ..
T Consensus 245 g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~ 322 (542)
T PRK06018 245 GTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYM-EKEGLKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVR 322 (542)
T ss_pred CceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcc-cccCCCcccceEEEEcCCCCCHHHHHHHHH-hCCCeE
Confidence 99998874 679999999999999999999999999998876 555567889999999999999999999998 63 23
Q ss_pred ccccccccC
Q 045351 330 NRQLCLEFG 338 (349)
Q Consensus 330 ~~~~~~~~G 338 (349)
+.|+.+|.|
T Consensus 323 ~~YG~tE~~ 331 (542)
T PRK06018 323 HAWGMTEMS 331 (542)
T ss_pred eeecccccC
Confidence 334556654
No 72
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=8.6e-37 Score=320.72 Aligned_cols=302 Identities=15% Similarity=0.131 Sum_probs=237.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC-------CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT-------ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~-------~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.++.+.|..++ +.+ |+++|+++. ..++++||+||.++++++|++|.+ .|+++||+|+|+++|+++++++
T Consensus 236 ~~l~~~~~~~a--~~~-pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~~ 311 (1389)
T TIGR03443 236 GAIHDIFADNA--EKH-PDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVVA 311 (1389)
T ss_pred CcHHHHHHHHH--HhC-CCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHHH
Confidence 57999999999 999 999999863 135799999999999999999998 9999999999999999999999
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc---cccc-----c----CcceEEeCCC-Ccc-ccccc
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH---KIPQ-----L----KYGTVLLDSP-EFE-PLSAT 166 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---~~~~-----~----~~~~~~~~~~-~~~-~~~~~ 166 (349)
+|||+++|++++|++|..+.+++.++++.+++++++++..... .+.. . ....+.+... ... .....
T Consensus 312 ~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (1389)
T TIGR03443 312 VMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEG 391 (1389)
T ss_pred HHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccccccc
Confidence 9999999999999999999999999999999999998754211 1100 0 0011111100 000 00000
Q ss_pred c--C--CCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhh
Q 045351 167 D--S--LDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYG 242 (349)
Q Consensus 167 ~--~--~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 242 (349)
. + ..+.............++++++|+|||||||.||||+++|+++.+.+.+....++ +.++++++...|++|+.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~d~~ 470 (1389)
T TIGR03443 392 GETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFG-LSENDKFTMLSGIAHDPI 470 (1389)
T ss_pred ccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC-CCCCCEEEEecCceecch
Confidence 0 0 0000000001112346789999999999999999999999999999888887777 789999999999999999
Q ss_pred HHHHHhhhhcCCEEEEcCC---CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHH
Q 045351 243 FTCCLRSLGMGESLVCMGK---FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVI 319 (349)
Q Consensus 243 ~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~ 319 (349)
+..++.+|+.|+++++++. .++..+++.|+++++|++.++|++++.|.... ...+++||.+++||+++++...
T Consensus 471 ~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~----~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 471 QRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA----TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred HHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc----cccCCCccEEEEecccCCHHHH
Confidence 9999999999999999864 36889999999999999999999999987653 2357899999999999999999
Q ss_pred HHHHHHcCCc---ccccccccC
Q 045351 320 RKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 320 ~~~~~~~~~~---~~~~~~~~G 338 (349)
+++.+..++. +.|+.||.+
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~ 568 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQ 568 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccc
Confidence 9998877543 334445543
No 73
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-36 Score=288.24 Aligned_cols=293 Identities=17% Similarity=0.137 Sum_probs=234.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhc-CCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKY-KLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.++.+.|...+ . ++++|+++. ++.+||+||.++++++|++|++ . |+++|++|+++++|+++++++++||++
T Consensus 5 ~~~~~~l~~~a----~-~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~-~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 5 PTVAELLLPLA----E-DDDRGLYFE--DSFTSWREHIRGSAARAAALRA-RLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred ccHHHHHHHhc----c-cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 57888888777 4 678999886 7899999999999999999998 6 899999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc--CcceEEeCCCCccccccccCCCCCCCCccccccccC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL--KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVS 184 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
+|++++|+++..+.+++.++++.+++++++++++....+... ...++..+...+.+...... ..........
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~ 150 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHR------DAEPPFRVAD 150 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccC------CCCCCcccCC
Confidence 999999999999999999999999999999998766544332 22233333222222221110 0111122456
Q ss_pred CCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCC
Q 045351 185 LSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFD 263 (349)
Q Consensus 185 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~ 263 (349)
++++++++|||||||.||+|+++|+++..........++ +..+|+++...|++|.+++ ..++.++..|+++++.++++
T Consensus 151 ~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~ 229 (529)
T PRK07867 151 PDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFG-LGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFS 229 (529)
T ss_pred ccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhC-CCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCC
Confidence 789999999999999999999999999988888777777 6889999999999999999 55667899999999999999
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccC
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
+..+++.++++++|++.++|..+..++... .......+++|. ++||+.+++. ..++.+.++ ..+.|+.+|.|
T Consensus 230 ~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~-~~~~~~~~~lr~-~~gg~~~~~~-~~~~~~~~g~~l~~~YG~TE~~ 303 (529)
T PRK07867 230 ASGFLPDVRRYGATYANYVGKPLSYVLATP-ERPDDADNPLRI-VYGNEGAPGD-IARFARRFGCVVVDGFGSTEGG 303 (529)
T ss_pred HHHHHHHHHHhCCeEEeccHHHHHHHHhCC-CcccccccceEE-EecCCCChHH-HHHHHHHhCCcEEEeecccccc
Confidence 999999999999999999999999988765 433333467885 4588888776 467777774 23345566655
No 74
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-36 Score=290.58 Aligned_cols=298 Identities=21% Similarity=0.252 Sum_probs=237.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.+++...+ +++ |+++|++++ ++.+||.||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 7 ~~~~~~~~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 80 (528)
T PRK07470 7 MNLAHFLRQAA--RRF-PDRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFAAFRL 80 (528)
T ss_pred CCHHHHHHHHH--HHC-CCceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 68999999999 899 999999986 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----C-cceEEeCCC----CccccccccCCCCCCCCcc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----K-YGTVLLDSP----EFEPLSATDSLDYYDDDEE 177 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 177 (349)
|++++++++..+.+++.++++.+++++++++++..+.+... . ..++.++.. .+.++.... ....
T Consensus 81 G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 154 (528)
T PRK07470 81 GAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARH------LGAR 154 (528)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcC------CCCC
Confidence 99999999999999999999999999999997654333211 1 112222221 111111110 0011
Q ss_pred ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc-ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEE
Q 045351 178 RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV-RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESL 256 (349)
Q Consensus 178 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~ 256 (349)
.......++++++|+|||||||.||+|.++|+++...+...... .....+.++++...|++|.+++..++ .++.|++.
T Consensus 155 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~ 233 (528)
T PRK07470 155 VANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAAT 233 (528)
T ss_pred CCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceE
Confidence 11224567899999999999999999999999997655432222 21256788999999999999986544 67788887
Q ss_pred EEcC--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccc
Q 045351 257 VCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQ 332 (349)
Q Consensus 257 v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~ 332 (349)
++.+ .+++..+++.|+++++|++.++|.+++.+.+.+ .....+++++|.+++||+++++++.+++.+.++. .+.|
T Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~Y 312 (528)
T PRK07470 234 VLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHP-AVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYF 312 (528)
T ss_pred EEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCc-CcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhC
Confidence 7764 679999999999999999999999999999886 6666778999999999999999999999888853 2334
Q ss_pred cccccCc
Q 045351 333 LCLEFGA 339 (349)
Q Consensus 333 ~~~~~G~ 339 (349)
+.+|.|.
T Consensus 313 G~TE~~~ 319 (528)
T PRK07470 313 GLGEVTG 319 (528)
T ss_pred CCcccCC
Confidence 5566543
No 75
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-36 Score=290.90 Aligned_cols=322 Identities=22% Similarity=0.257 Sum_probs=250.4
Q ss_pred cceeeccCCCCC-CCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEE
Q 045351 10 ETKIFHSLRPSI-AFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAF 88 (349)
Q Consensus 10 ~~~~~~~~~~~~-~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~ 88 (349)
..+.|....|.. .++.+..++.+.|...+ +.+ |+++|+.+. ++.+||.||.+++.++|+.|.+ .|+++|++|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a--~~~-p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~ 87 (567)
T PRK06178 14 QQAAWPAGIPREPEYPHGERPLTEYLRAWA--RER-PQRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDRVA 87 (567)
T ss_pred HHhhCCcCCCCCCCCCcCcccHHHHHHHHH--HHC-CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEE
Confidence 455665444444 45554488999999999 889 999999987 7899999999999999999998 9999999999
Q ss_pred EEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----Ccc-eEEeCCCCcccc
Q 045351 89 LLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYG-TVLLDSPEFEPL 163 (349)
Q Consensus 89 i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~ 163 (349)
++++|+.+++++++||+++|++++|++|..+.+++.++++.++++++++++...+.+.+. ... ++..+..+....
T Consensus 88 i~~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~ 167 (567)
T PRK06178 88 VFLPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPA 167 (567)
T ss_pred EECCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccc
Confidence 999999999999999999999999999999999999999999999999988765543321 111 111111110000
Q ss_pred ---------cccc---CCCC-------CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccC
Q 045351 164 ---------SATD---SLDY-------YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAA 224 (349)
Q Consensus 164 ---------~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 224 (349)
.... ...+ .............++++++|+|||||||.||+|++||+++.............
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~ 247 (567)
T PRK06178 168 EPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVV 247 (567)
T ss_pred ccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhcc
Confidence 0000 0000 00001111223557899999999999999999999999998876554333222
Q ss_pred CCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcc
Q 045351 225 RSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSS 303 (349)
Q Consensus 225 ~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~ 303 (349)
..++++++..+|++|.+|+ ..++.++..|+++++.+++++..+++.++++++|.+.++|..+..+.... ...+.++++
T Consensus 248 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~-~~~~~~l~~ 326 (567)
T PRK06178 248 GGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHP-RFAEYDLSS 326 (567)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCC-CCCCCCcch
Confidence 6788999999999999998 67888999999999999999999999999999999999999999998876 556667788
Q ss_pred hheeh--ccCCCCCHHHHHHHHHHcCCcc---cccccccC
Q 045351 304 IEVVA--SGGAHLTLSVIRKYLQLNRTVN---RQLCLEFG 338 (349)
Q Consensus 304 lr~i~--~gG~~l~~~~~~~~~~~~~~~~---~~~~~~~G 338 (349)
++.+. ++|+++++++.+.+.+.++... .|+++|.|
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~ 366 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETH 366 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhCCccccccccccccc
Confidence 88764 4568999999999999886432 35566654
No 76
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-36 Score=291.73 Aligned_cols=306 Identities=17% Similarity=0.168 Sum_probs=239.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.|+.+.|+..+ ..+ |++.|++++. .++.+||+||.++++++|++|.++.|+++||+|+++++|+.+++++++||++
T Consensus 10 ~~~~~~l~~~a--~~~-~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 10 LSLTRILEYGS--TVH-GDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred CcHHHHHHHHH--HhC-CCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 68999999999 899 9999998753 3589999999999999999998537999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Ccc-eEEeCCCCccccccccCCC--------C-
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYG-TVLLDSPEFEPLSATDSLD--------Y- 171 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~--------~- 171 (349)
+|++++|+++..+.+++.++++.++++++++++...+.+.+. ..+ ++..+.............. +
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL 166 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh
Confidence 999999999999999999999999999999988655443221 111 2333321111000000000 0
Q ss_pred CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhh--hccccCCCCCcEEEEecChhhHhhHHHHHhh
Q 045351 172 YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGG--HAVRAARSRPAVVLCTVPYFHSYGFTCCLRS 249 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 249 (349)
.............++++++++|||||||.||||.++|+++....... ...+. +..++++++.+|++|.+|+...+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~-~~~~~~~l~~~pl~h~~g~~~~~~~ 245 (576)
T PRK05620 167 DGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLA-VTHGESFLCCVPIYHVLSWGVPLAA 245 (576)
T ss_pred hcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcC-CCCCCeEEEeCChHHhhhhHHHHHH
Confidence 00010111223566899999999999999999999999987654432 23445 6789999999999999999888899
Q ss_pred hhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC-
Q 045351 250 LGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR- 327 (349)
Q Consensus 250 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~- 327 (349)
+..|+++++.+ .+++..+++.++++++|++.++|.++..|+... .....+..++|.+++||+++++++.+++.+.++
T Consensus 246 l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~ 324 (576)
T PRK05620 246 FMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHY-LKNPPERMSLQEIYVGGSAVPPILIKAWEERYGV 324 (576)
T ss_pred HhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHh-hccCcccCceeEEEEcCCCCCHHHHHHHHHHhCC
Confidence 99999999885 679999999999999999999999999888653 333334568999999999999999999998874
Q ss_pred -CcccccccccC
Q 045351 328 -TVNRQLCLEFG 338 (349)
Q Consensus 328 -~~~~~~~~~~G 338 (349)
..+.|+.+|.|
T Consensus 325 ~~~~~YG~tE~~ 336 (576)
T PRK05620 325 DVVHVWGMTETS 336 (576)
T ss_pred ceeeeccccccc
Confidence 23334556654
No 77
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.9e-37 Score=345.80 Aligned_cols=292 Identities=17% Similarity=0.203 Sum_probs=245.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|..++ ..+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+.++++++|||+++
T Consensus 2003 ~~~~~~~~~~a--~~~-p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~a 2076 (5163)
T PRK12316 2003 PGVHQRIAEQA--ARA-PEAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLKA 2076 (5163)
T ss_pred CCHHHHHHHHH--HhC-CCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 58999999999 999 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc-cCcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ-LKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|++|..+.+++.++++++++++++++......+.. .....+.++.. .... . ...........++
T Consensus 2077 Ga~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-------~~~~~~~~~~~~~ 2146 (5163)
T PRK12316 2077 GGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD--AEWA-D-------YPDTAPAVQLAGE 2146 (5163)
T ss_pred ceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch--hhhh-c-------cCccCCCCCCCCC
Confidence 9999999999999999999999999999998876554432 11222222211 0000 0 0111112346789
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC--CCCH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG--KFDF 264 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~--~~~~ 264 (349)
++++|+|||||||.||||+++|+++.+.+......++ +.++++++...|++|+.++..++.+|+.|+++++.+ .+++
T Consensus 2147 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~ 2225 (5163)
T PRK12316 2147 NLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYE-LSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDP 2225 (5163)
T ss_pred CeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcC-CCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCH
Confidence 9999999999999999999999999999988888887 789999999999999999999999999999998875 4689
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
..+++.|+++++|++.++|++++.|.+.. ... ...++||.+++||++++++++++|.+.++.. +.||.||.+
T Consensus 2226 ~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~-~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 2300 (5163)
T PRK12316 2226 EQLYDEMERHGVTILDFPPVYLQQLAEHA-ERD-GRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAV 2300 (5163)
T ss_pred HHHHHHHHHcCCeEEEcChHHHHHHHhhh-hcc-cCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhhe
Confidence 99999999999999999999999998764 322 2345899999999999999999999887643 334555543
No 78
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6e-37 Score=297.14 Aligned_cols=281 Identities=17% Similarity=0.232 Sum_probs=221.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-------CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-------SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
.|+.+++...+ ..+ |+++|+++.+ ..+.+||+||.++++++|++|.+ . +++||+|+++++|+++|+++
T Consensus 34 ~~~~~~~~~~~--~~~-~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~~ 108 (612)
T PRK12476 34 TTLISLIERNI--ANV-GDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVAG 108 (612)
T ss_pred CcHHHHHHHHH--HhC-CCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHHH
Confidence 78999999999 889 9999998632 12589999999999999999998 6 99999999999999999999
Q ss_pred HHHHHhcCCeEecC-CCCCC--HHHHHHHHhhcCCeEEEEcCcccccccc----c---C-cceEEeCCCCccccccccCC
Q 045351 101 YLSLFSLGVVVSPC-NPSCT--IPEILRQIHLSKPVIAFATHDTAHKIPQ----L---K-YGTVLLDSPEFEPLSATDSL 169 (349)
Q Consensus 101 ~lA~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~ 169 (349)
++||+++|++++|+ ++..+ .+++.++++.++++++++++...+.+.. . . ..++.++. .. ..
T Consensus 109 ~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~--- 180 (612)
T PRK12476 109 FFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDA--IP---DS--- 180 (612)
T ss_pred HHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecc--cc---cc---
Confidence 99999999999999 57666 7899999999999999998765443221 0 1 12222221 10 00
Q ss_pred CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhh
Q 045351 170 DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRS 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 249 (349)
...........++++++|+|||||||.||||++||+++...+......++.+.+++++++.+|++|.+|+...+.+
T Consensus 181 ----~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~ 256 (612)
T PRK12476 181 ----AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFP 256 (612)
T ss_pred ----ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHH
Confidence 0001111234568999999999999999999999999988776655444423678899999999999999766666
Q ss_pred hhcCCEEEEcCC--C--CHHHHHHHHH--hhcccEEEechHHHHHHHhcCC---CCCCCCCcchheehccCCCCCHHHHH
Q 045351 250 LGMGESLVCMGK--F--DFGRMLKAVE--EFRVSHVVLAPPVVLKMARDGG---TMDGYDLSSIEVVASGGAHLTLSVIR 320 (349)
Q Consensus 250 l~~G~~~v~~~~--~--~~~~~~~~i~--~~~~t~l~~~P~~l~~l~~~~~---~~~~~~l~~lr~i~~gG~~l~~~~~~ 320 (349)
++.|++.++..+ + ++..+++.++ +++++.+..+|.++..++.... .....+++++| +++||+++++++.+
T Consensus 257 ~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~ 335 (612)
T PRK12476 257 AVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVT 335 (612)
T ss_pred HhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHH
Confidence 667777766642 3 8999999995 5899999999999888876420 12345788999 99999999999999
Q ss_pred HHHHHc
Q 045351 321 KYLQLN 326 (349)
Q Consensus 321 ~~~~~~ 326 (349)
++.+.|
T Consensus 336 ~~~~~~ 341 (612)
T PRK12476 336 TFNKAF 341 (612)
T ss_pred HHHHHH
Confidence 999987
No 79
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-36 Score=290.14 Aligned_cols=304 Identities=21% Similarity=0.200 Sum_probs=237.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC--CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS--RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
.++.++|...+ ..+ +++.++.+... .+.+||.||.++++++|++|.+ .|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la~~ 85 (539)
T PRK07008 10 LLISSLIAHAA--RHA-GDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYGVS 85 (539)
T ss_pred CCHHHHHHHHH--hhC-CCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 47899999999 888 99988876322 3689999999999999999999 999999999999999999999999999
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Ccc-eEEeCCCCc-c----ccccccCCCCCCC
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KYG-TVLLDSPEF-E----PLSATDSLDYYDD 174 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~~-~~~~~~~~~-~----~~~~~~~~~~~~~ 174 (349)
++|++++|+++..+.+++..+++.+++++++++.++.+.+.+. ... ++.+..... . ......+. ....
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 164 (539)
T PRK07008 86 GSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETL-VGAQ 164 (539)
T ss_pred hcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHH-hccc
Confidence 9999999999999999999999999999999987654433221 111 111211100 0 00000000 0000
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHh--hhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhc
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVA--GGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGM 252 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 252 (349)
..........+++.++++|||||||.||+|++||++++.... .+...++ +..++++++..|++|.+++...+.++..
T Consensus 165 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (539)
T PRK07008 165 DGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMG-LSARDAVLPVVPMFHVNAWGLPYSAPLT 243 (539)
T ss_pred CCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccC-CCCCceEEecCchHHhhhHHHHHHHHhc
Confidence 111112234668899999999999999999999999875432 2334555 6788999999999999888777888999
Q ss_pred CCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--c
Q 045351 253 GESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--V 329 (349)
Q Consensus 253 G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~ 329 (349)
|+++++. +.+++..+++.++++++|++.++|.++..|.+.. .....+++++|.+++||+++++++++++.+.++. .
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~ 322 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHM-REAGLRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVI 322 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcc-cccCCCcccceEEEEcCCCCCHHHHHHHHHHhCCcee
Confidence 9999987 4679999999999999999999999999999876 5566778999999999999999999999988842 2
Q ss_pred ccccccccC
Q 045351 330 NRQLCLEFG 338 (349)
Q Consensus 330 ~~~~~~~~G 338 (349)
..|+.+|.|
T Consensus 323 ~~YG~tE~~ 331 (539)
T PRK07008 323 HAWGMTEMS 331 (539)
T ss_pred ccccccccc
Confidence 334455554
No 80
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.4e-36 Score=285.70 Aligned_cols=293 Identities=20% Similarity=0.221 Sum_probs=243.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+++.+.|...+ +.+ |+++|+++. ++.+||+||.++++++|..|.+ .|+++|++|+++++|+.+++++++||++.
T Consensus 2 ~~~~~~l~~~a--~~~-p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~~ 75 (503)
T PRK04813 2 MDIIETIEEFA--QTQ-PDFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVKA 75 (503)
T ss_pred chHHHHHHHHH--HhC-CCceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 46889999999 889 999999986 7899999999999999999999 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++..+++++++++....... ....+..+ ++.+.... ...........+++
T Consensus 76 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~ 144 (503)
T PRK04813 76 GHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEIL--GIPVITLD--ELKDIFAT-------GNPYDFDHAVKGDD 144 (503)
T ss_pred CCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccccc--CCcEEehH--Hhhhhhhc-------cccccccccCCCCC
Confidence 999999999999999999999999999999876521111 11111111 11111100 01111122456788
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---CCH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK---FDF 264 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~ 264 (349)
+++++|||||||.||+|.++|+++..........+. +..+++++...|++|..++..++.++..|+++++.++ +++
T Consensus 145 ~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~ 223 (503)
T PRK04813 145 NYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFA-LPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANF 223 (503)
T ss_pred cEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcC-CCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCH
Confidence 999999999999999999999999998888777777 7889999999999999999888899999999999864 589
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
..+++.++++++|++..+|.+++.+.... .....+++++|.++++|+++++++.+++.+.+++. ..|+.+|.|.
T Consensus 224 ~~~~~~~~~~~~t~~~~~p~~~~~~~~~~-~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 300 (503)
T PRK04813 224 KQLFETLPQLPINVWVSTPSFADMCLLDP-SFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATV 300 (503)
T ss_pred HHHHHHHHHcCCeEEEeChHHHHHHHHhh-ccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchhee
Confidence 99999999999999999999998877665 55566788999999999999999999999998643 3345566553
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.7e-36 Score=286.18 Aligned_cols=302 Identities=18% Similarity=0.169 Sum_probs=237.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.++|...+ +.+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 10 ~~l~~~l~~~a--~~~-p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 10 DTLASLLDAHA--RAR-PDAVALIDE--DRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred CCHHHHHHHHH--HhC-CCCeEEecC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 68999999999 999 999999975 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc-----ccccc------Cc-ceEEeCCC--Ccccccccc-CCCC-
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH-----KIPQL------KY-GTVLLDSP--EFEPLSATD-SLDY- 171 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~------~~-~~~~~~~~--~~~~~~~~~-~~~~- 171 (349)
|++++|+++..+.+++.++++.++++++++++++.. .+... .. .++.++.. ......... ....
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFA 163 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccccc
Confidence 999999999999999999999999999999876421 11110 11 12222210 000000000 0000
Q ss_pred -C--CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHh
Q 045351 172 -Y--DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLR 248 (349)
Q Consensus 172 -~--~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 248 (349)
. ............++++++++|||||||.||+|.++|+++...+......++ +..++++++.+|++|.+|+..++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~~~~~ 242 (540)
T PRK06164 164 LPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYG-YDPGAVLLAALPFCGVFGFSTLLG 242 (540)
T ss_pred ccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcC-CCCCCEEEEcCCchhHHHHHHHHH
Confidence 0 000000112234688999999999999999999999999999888888887 689999999999999999988999
Q ss_pred hhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccC-CCCCHHHHHHHHHHc-
Q 045351 249 SLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGG-AHLTLSVIRKYLQLN- 326 (349)
Q Consensus 249 ~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG-~~l~~~~~~~~~~~~- 326 (349)
++..|+++++.+.+++..+++.|+++++|+++++|.++..|.+. .....++++++.+.++| .+...++.+++.+.-
T Consensus 243 ~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 320 (540)
T PRK06164 243 ALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDT--AGERADFPSARLFGFASFAPALGELAALARARGV 320 (540)
T ss_pred HHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh--hcccCCCcceeeeeeccCCcchHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999887 33456788999887665 556666666666541
Q ss_pred CCcccccccccC
Q 045351 327 RTVNRQLCLEFG 338 (349)
Q Consensus 327 ~~~~~~~~~~~G 338 (349)
+..+.|+.+|.|
T Consensus 321 ~~~~~YG~tE~~ 332 (540)
T PRK06164 321 PLTGLYGSSEVQ 332 (540)
T ss_pred ceecceeecccc
Confidence 223445566654
No 82
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-36 Score=290.04 Aligned_cols=292 Identities=14% Similarity=0.146 Sum_probs=220.9
Q ss_pred hhhhhhcccCCCCCCCCCeEEEeCCCC--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 30 VTSYVFSLLESHAPPPDTTALIDTASR--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 30 l~~~l~~~~~~~~~~~~~~ai~~~~~~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+.+.|...+ +++ |+++|+++.+.+ +++||+||.++++++|+.|.+ . ++||+|+|+++|+++++++++||+++
T Consensus 4 ~~~~l~~~~--~~~-~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la~~~~ 77 (525)
T PRK05851 4 LAAALSDAM--TAS-GRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQGAWLA 77 (525)
T ss_pred HHHHHHHHh--cCC-CCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHHHHHc
Confidence 788899999 889 999999987433 889999999999999999998 6 89999999999999999999999999
Q ss_pred CCeEecCCCC-------CCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccc
Q 045351 108 GVVVSPCNPS-------CTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVR 180 (349)
Q Consensus 108 G~~~v~i~~~-------~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|+++++++.. ...+++.++++.+++++++++......+......+. +. +....... ... ...
T Consensus 78 G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~--~~~~~~~~-------~~~-~~~ 146 (525)
T PRK05851 78 GAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSVT-VH--DLATAAHT-------NRS-ASL 146 (525)
T ss_pred CCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcccc-cc--cccccccc-------ccc-ccC
Confidence 9986543211 223455667899999999998765443322111110 10 01000000 000 001
Q ss_pred cccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCC-CCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 181 VSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARS-RPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 181 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
....++++++|+|||||||.||||++||+++...+......++ +. .+|++++.+|++|.+|+..++.+++.|+++++.
T Consensus 147 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~ 225 (525)
T PRK05851 147 TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVG-LDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLA 225 (525)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC-CCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEc
Confidence 1246789999999999999999999999999998888777777 67 899999999999999998888999999999998
Q ss_pred C--CC--CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc---C-----
Q 045351 260 G--KF--DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN---R----- 327 (349)
Q Consensus 260 ~--~~--~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~---~----- 327 (349)
+ .| ++..+++.++++++|++..+|.++..+.+........++++||.+++||+++++++.++|.+.+ +
T Consensus 226 ~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~ 305 (525)
T PRK05851 226 PTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGA 305 (525)
T ss_pred CHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhh
Confidence 6 34 6789999999999998755444444443332122345688999999999999999999998752 2
Q ss_pred CcccccccccCc
Q 045351 328 TVNRQLCLEFGA 339 (349)
Q Consensus 328 ~~~~~~~~~~G~ 339 (349)
..+.|+.||.+.
T Consensus 306 ~~~~YG~TE~~~ 317 (525)
T PRK05851 306 AAPSYGLAESTC 317 (525)
T ss_pred cccccchhhhce
Confidence 234556666653
No 83
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-36 Score=287.83 Aligned_cols=303 Identities=23% Similarity=0.265 Sum_probs=233.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+++...+ +++ |+++|+.+. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~l~~~~~~~a--~~~-p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~~ 76 (533)
T PRK07798 3 WNIADLFEAVA--DAV-PDRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFKA 76 (533)
T ss_pred ccHHHHHHHHH--HhC-CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 68999999999 999 999999997 8999999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Cc-ceEEeCCCCcccccc---ccCCCCCCCCccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KY-GTVLLDSPEFEPLSA---TDSLDYYDDDEER 178 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 178 (349)
|++++|+++..+.+++.++++.+++++++++....+.+.+. .. .++.++......... .............
T Consensus 77 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (533)
T PRK07798 77 RAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSPER 156 (533)
T ss_pred CeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCCcC
Confidence 99999999999999999999999999999987655444321 11 122233211111000 0000000000001
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---------c-----CCCCCcEEEEecChhhHhhHH
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---------A-----ARSRPAVVLCTVPYFHSYGFT 244 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---------~-----~~~~~~~~l~~~p~~~~~g~~ 244 (349)
......++.++++|||||||.||+|+++|+++........... . ....+++++...|++|.+++.
T Consensus 157 -~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~ 235 (533)
T PRK07798 157 -DFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQW 235 (533)
T ss_pred -CCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHH
Confidence 1111223457999999999999999999999986554322111 0 014668999999999999999
Q ss_pred HHHhhhhcCCEEEEcC--CCCHHHHHHHHHhhcccEEEechHHHH-HHHhcCCC-CCCCCCcchheehccCCCCCHHHHH
Q 045351 245 CCLRSLGMGESLVCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVL-KMARDGGT-MDGYDLSSIEVVASGGAHLTLSVIR 320 (349)
Q Consensus 245 ~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~-~l~~~~~~-~~~~~l~~lr~i~~gG~~l~~~~~~ 320 (349)
.++.+++.|+++++.+ .+++..+++.++++++|++.++|..+. .+.... . ....+++++|.+++||+++++++.+
T Consensus 236 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~i~~gG~~~~~~~~~ 314 (533)
T PRK07798 236 AAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDAL-EARGPYDLSSLFAIASGGALFSPSVKE 314 (533)
T ss_pred HHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHh-cccccCCCCceEEEEECCCCCCHHHHH
Confidence 9999999999999998 889999999999999999999987654 344433 2 3345678999999999999999999
Q ss_pred HHHHHcCCc---ccccccccC
Q 045351 321 KYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 321 ~~~~~~~~~---~~~~~~~~G 338 (349)
++.+.+++. +.|+.+|.|
T Consensus 315 ~~~~~~~~~~~~~~YG~tE~~ 335 (533)
T PRK07798 315 ALLELLPNVVLTDSIGSSETG 335 (533)
T ss_pred HHHHHcCCCeEEeeecccccc
Confidence 999988543 224455544
No 84
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.1e-36 Score=340.47 Aligned_cols=289 Identities=17% Similarity=0.213 Sum_probs=244.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|..++ .++ |+++|+++. +..+||+||.++++++|+.|.+ .|+++|++|+|+++++.++++++||++++
T Consensus 3720 ~~~~~~~~~~~--~~~-p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~-~gv~~~~~V~v~~~~s~~~~v~~lavlka 3793 (4334)
T PRK05691 3720 QSYVRLFEAQV--AAH-PQRIAASCL--DQQWSYAELNRAANRLGHALRA-AGVGVDQPVALLAERGLDLLGMIVGSFKA 3793 (4334)
T ss_pred cCHHHHHHHHH--HhC-CCceEEEcC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 68999999999 999 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC-------c-ceEEeCCCCccccccccCCCCCCCCcccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK-------Y-GTVLLDSPEFEPLSATDSLDYYDDDEERV 179 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
|++++|+++..+.+++.++++.+++++++++........... . .+...+. ..... ......
T Consensus 3794 G~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~ 3862 (4334)
T PRK05691 3794 GAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE-----VQAGE------VASHNP 3862 (4334)
T ss_pred CcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc-----ccccc------ccccCC
Confidence 999999999999999999999999999999886544322210 0 1111111 00000 011112
Q ss_pred ccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 180 RVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 180 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
.....+++.+||+|||||||.||||+++|+++.+.+.+....++ +.+.++++...+++|+.+++.++.+|+.|+++++.
T Consensus 3863 ~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~ 3941 (4334)
T PRK05691 3863 GIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLA-LSEADVIAQTASQSFDISVWQFLAAPLFGARVEIV 3941 (4334)
T ss_pred CCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcC-CCccceEEEecCCchhHHHHHHHHHHhCCCEEEEc
Confidence 23457899999999999999999999999999999998888888 79999999999999999999999999999999998
Q ss_pred C---CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcccccccc
Q 045351 260 G---KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVNRQLCLE 336 (349)
Q Consensus 260 ~---~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (349)
+ ..++..+++.++++++|++.++|+++..++... ...+++||.+++||+++++++.++|.+.+++.+ +++.
T Consensus 3942 ~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~----~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~--l~n~ 4015 (4334)
T PRK05691 3942 PNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED----RQALDGLRWMLPTGEAMPPELARQWLQRYPQIG--LVNA 4015 (4334)
T ss_pred CccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc----cccCCCceEEEecCCcCCHHHHHHHHHhCCCCe--EEeC
Confidence 5 358999999999999999999999999987653 234788999999999999999999999887542 4455
Q ss_pred cCce
Q 045351 337 FGAP 340 (349)
Q Consensus 337 ~G~~ 340 (349)
||.+
T Consensus 4016 YG~T 4019 (4334)
T PRK05691 4016 YGPA 4019 (4334)
T ss_pred ccCc
Confidence 5543
No 85
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-37 Score=262.75 Aligned_cols=292 Identities=20% Similarity=0.232 Sum_probs=248.6
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
+.|+.+.|.+.+ .++ ||++|++++ ++.+||++|.+++.++|..|++ .||++||+|++.+||..+|+++++|+++
T Consensus 27 d~~l~d~L~~~A--~~~-pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FALlr 100 (542)
T COG1021 27 DRTLTDILTDHA--ARY-PDRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFALLR 100 (542)
T ss_pred CCcHHHHHHHHH--hhc-CCceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHHHHH
Confidence 479999999999 999 999999998 7889999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc--------ccccc--cCcceEEeCC-CC-ccccccccCCCCCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA--------HKIPQ--LKYGTVLLDS-PE-FEPLSATDSLDYYDD 174 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~--------~~~~~--~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 174 (349)
+|+.+|..-|.....|+.+..+.++++.++.++... ..+.. ...+.+.+.. .+ ...+...... ..
T Consensus 101 lGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~---~a 177 (542)
T COG1021 101 LGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCH---PA 177 (542)
T ss_pred cCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhC---cc
Confidence 999999999999999999999999999999876421 11111 1223333332 21 1111111100 01
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH--HHHHhhhhc
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF--TCCLRSLGM 252 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~--~~~~~~l~~ 252 (349)
.......+.++++++++..|-||||.||.|..||.....+...-.+..+ +..+.++|+.+|..|-+-+ -+.++.++.
T Consensus 178 ~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~-~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 178 GLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICG-FDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred ccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhC-cCccceEEEecccccCCCCCCcchhheeee
Confidence 1222334677889999999999999999999999999988888888888 7999999999999999998 489999999
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc
Q 045351 253 GESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV 329 (349)
Q Consensus 253 G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 329 (349)
|+++|+.+..+|...+.+|+++++|+..++|.....++... +....+++|||.+-+||+.+++.+.++....+++.
T Consensus 257 gG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~-e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lgC~ 332 (542)
T COG1021 257 GGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAA-EWERADLSSLRLLQVGGARLSATLARRVPAVLGCQ 332 (542)
T ss_pred ccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhh-hcccCCchheeEEeecCcccCHHHHhhchhhhCch
Confidence 99999999999999999999999999999999999999888 88899999999999999999999999999988654
No 86
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.9e-36 Score=285.61 Aligned_cols=304 Identities=18% Similarity=0.117 Sum_probs=234.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC---CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA---SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.|+.++++..+ +++ |+++|+++.+ +.+.+||+||.++++++|+.|.+ .|+++||+|+++++|+.+++++++||
T Consensus 7 ~~l~~~~~~~a--~~~-p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la~ 82 (517)
T PRK08008 7 QHLRQMWDDLA--DVY-GHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFGL 82 (517)
T ss_pred ccHHHHHHHHH--HHC-CCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 58999999999 999 9999998753 23789999999999999999998 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc------Ccc-eEEeCCCC--ccccccccCCCCCCCC
Q 045351 105 FSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL------KYG-TVLLDSPE--FEPLSATDSLDYYDDD 175 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------~~~-~~~~~~~~--~~~~~~~~~~~~~~~~ 175 (349)
+++|++++++++..+.+++.++++.+++++++++.+..+.+.+. ..+ ++..+... ................
T Consensus 83 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 83 AKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPA 162 (517)
T ss_pred HHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCc
Confidence 99999999999999999999999999999999988765443321 111 22222110 0000000000000000
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGE 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~ 254 (349)
.........++++++|+|||||||.||+|++||+++............ +..++++++.+|++|..+. ..++.++..|+
T Consensus 163 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 241 (517)
T PRK08008 163 TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCA-LRDDDVYLTVMPAFHIDCQCTAAMAAFSAGA 241 (517)
T ss_pred cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcC-CCCCCeEEEecCcHHHHHHHHHHHHHHhcCc
Confidence 001112345689999999999999999999999999865443333333 5788999999999998777 67788999999
Q ss_pred EEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccc
Q 045351 255 SLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQ 332 (349)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~ 332 (349)
++++.+++++..+++.++++++|.+.++|.+++.+...+ ........+++.+.+++ +++.+....+.+.++. .+.|
T Consensus 242 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y 319 (517)
T PRK08008 242 TFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQP-PSANDRQHCLREVMFYL-NLSDQEKDAFEERFGVRLLTSY 319 (517)
T ss_pred EEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCC-CccccccccceeeEEec-CCCHHHHHHHHHHhCCeEEeec
Confidence 999999999999999999999999999999999998775 44444456788777754 7999999999988743 2334
Q ss_pred cccccC
Q 045351 333 LCLEFG 338 (349)
Q Consensus 333 ~~~~~G 338 (349)
+.+|.|
T Consensus 320 G~tE~~ 325 (517)
T PRK08008 320 GMTETI 325 (517)
T ss_pred cccccc
Confidence 455554
No 87
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=7.8e-36 Score=285.27 Aligned_cols=284 Identities=19% Similarity=0.206 Sum_probs=232.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+++...+ + |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 25 ~~~~~~~~~~a--~---p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la~~~~ 96 (536)
T PRK10946 25 LPLTDILTRHA--A---SDAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFALLKL 96 (536)
T ss_pred ccHHHHHHHhh--C---CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHHHHHc
Confidence 67999998878 4 799999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc--------ccccc--cCcceEEeCCC----CccccccccCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA--------HKIPQ--LKYGTVLLDSP----EFEPLSATDSLDYYD 173 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~--------~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~ 173 (349)
|++++++.+.....++..+++.++++++++++... +.+.. .....+..... .+......
T Consensus 97 G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 169 (536)
T PRK10946 97 GVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINH------- 169 (536)
T ss_pred CeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhC-------
Confidence 99988888777888999999999999999986431 11111 01122222211 11111111
Q ss_pred CCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH--HHHhhhh
Q 045351 174 DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT--CCLRSLG 251 (349)
Q Consensus 174 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~--~~~~~l~ 251 (349)
...........++++++++|||||||.||||++||+++...+......++ +..++++++.+|++|.+++. .++.++.
T Consensus 170 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~-~~~~~~~l~~~p~~h~~~~~~~~~~~~l~ 248 (536)
T PRK10946 170 PAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICG-FTPQTRYLCALPAAHNYPMSSPGALGVFL 248 (536)
T ss_pred cccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcC-CCCCceEEEecCccccccchhhhHHHHhh
Confidence 01111122456789999999999999999999999999999988877777 78899999999999999883 5788999
Q ss_pred cCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 252 MGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
.|+++++.+.+++..+++.++++++|++.++|.++..|+... .......++++|.+++||+++++++.+++.+.++
T Consensus 249 ~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g 325 (536)
T PRK10946 249 AGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELG 325 (536)
T ss_pred cCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcC
Confidence 999999998899999999999999999999999999998752 0333455789999999999999999999998884
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.3e-36 Score=312.91 Aligned_cols=304 Identities=18% Similarity=0.210 Sum_probs=245.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.+.+.+ +++ |+++|+++. .++.+||+||.++++++|+.|++ ++++||+|+++++|+++++++++||+++
T Consensus 615 ~~l~~~~~~~a--~~~-p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~~~ 688 (1146)
T PRK08633 615 PPLAEAWIDTA--KRN-WSRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALLLA 688 (1146)
T ss_pred CCHHHHHHHHH--Hhc-CCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHHHc
Confidence 68999999999 889 999999975 36899999999999999999987 4899999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc------c--CcceEEeCCCC--cc---ccccccCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ------L--KYGTVLLDSPE--FE---PLSATDSLDYYDD 174 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~------~--~~~~~~~~~~~--~~---~~~~~~~~~~~~~ 174 (349)
|++++|+++..+.+++.+++++++++++++++...+.+.+ . ..+++..+... .. .+...........
T Consensus 689 G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (1146)
T PRK08633 689 GKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPA 768 (1146)
T ss_pred CCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCH
Confidence 9999999999999999999999999999998765554431 1 11222222100 00 0000000000000
Q ss_pred C--ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhh
Q 045351 175 D--EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLG 251 (349)
Q Consensus 175 ~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~ 251 (349)
. .........++++++++|||||||.||+|.+||+++...+......++ ..++|++++.+|++|.+|+ ..++.++.
T Consensus 769 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 847 (1146)
T PRK08633 769 RLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFN-LRNDDVILSSLPFFHSFGLTVTLWLPLL 847 (1146)
T ss_pred HHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcC-CCCCCEEEEcCcHHHHHhHHHHHHHHHH
Confidence 0 000013456799999999999999999999999999999888777777 6889999999999999999 45889999
Q ss_pred cCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--C
Q 045351 252 MGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--T 328 (349)
Q Consensus 252 ~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~ 328 (349)
.|+++++.+ .+++..+++.++++++|++.++|.+++.+.+.. ...+.+++++|.+++||+++++++.+++.+.++ .
T Consensus 848 ~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~ 926 (1146)
T PRK08633 848 EGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNK-KLHPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRI 926 (1146)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcc-ccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCe
Confidence 999999875 579999999999999999999999999999876 566677899999999999999999999999884 3
Q ss_pred cccccccccCc
Q 045351 329 VNRQLCLEFGA 339 (349)
Q Consensus 329 ~~~~~~~~~G~ 339 (349)
.+.|+.+|.|.
T Consensus 927 ~~~YG~tE~~~ 937 (1146)
T PRK08633 927 LEGYGATETSP 937 (1146)
T ss_pred ecccccccCcc
Confidence 34456677653
No 89
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-36 Score=281.95 Aligned_cols=284 Identities=21% Similarity=0.264 Sum_probs=229.3
Q ss_pred cccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC
Q 045351 36 SLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 36 ~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~ 115 (349)
.++ +.+ ||++|+.+..+++.+||.||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++|++
T Consensus 3 ~~a--~~~-p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 3 FHA--RLQ-PQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLN 78 (488)
T ss_pred hhh--hhC-CCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeC
Confidence 345 667 999999875457899999999999999999998 9999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEecc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSS 195 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 195 (349)
+..+.+++.++++.++++++++++...... ...+ .++++...... .. ........++++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~~~~-----~~~~~~~~~~~----~~-~~~~~~~~~~~~~~i~~TS 144 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDAVAAGR----TDVE-----DLAAFIASADA----LE-PADTPSIPPERVSLILFTS 144 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcchhhccc----cccc-----chhhhhhhccc----cc-cccCCCCCCCCceEEEeCC
Confidence 999999999999999999999987543211 0011 11111111000 00 0111234568899999999
Q ss_pred CCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHH--
Q 045351 196 GTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVE-- 272 (349)
Q Consensus 196 GtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~-- 272 (349)
||||.||+|.++|+++...+........ ...++++++.+|++|.+|+ ..++.++..|+++++.+.+++..++..+.
T Consensus 145 GTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~ 223 (488)
T PRK09088 145 GTSGQPKGVMLSERNLQQTAHNFGVLGR-VDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDP 223 (488)
T ss_pred CCCCCCcEEEEehHHHHHHHHHHHHhhC-CCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhh
Confidence 9999999999999999887776666555 6789999999999999999 56778899999999998899999999886
Q ss_pred hhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHH-cCCcccccccccCc
Q 045351 273 EFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQL-NRTVNRQLCLEFGA 339 (349)
Q Consensus 273 ~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~-~~~~~~~~~~~~G~ 339 (349)
++++|++..+|.+++.+.+.+ ......++++|.+++||++++.+..+++.+. .+..+.|+.+|.|.
T Consensus 224 ~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~TE~~~ 290 (488)
T PRK09088 224 ALGITHYFCVPQMAQAFRAQP-GFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGMSEAGT 290 (488)
T ss_pred ccCCcEEeeHHHHHHHHHhCc-CcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeeccccccc
Confidence 488999999999999998875 5555667899999999999999998888764 23334455666653
No 90
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.1e-36 Score=338.18 Aligned_cols=289 Identities=20% Similarity=0.249 Sum_probs=245.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|..++ ..+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+.++++++||++++
T Consensus 1131 ~~l~~~~~~~a--~~~-p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailka 1204 (4334)
T PRK05691 1131 AWLPELLNEQA--RQT-PERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILKA 1204 (4334)
T ss_pred CCHHHHHHHHH--HhC-CCCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 68999999999 999 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-CcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|++++|+++..+.+++.++++++++++++++......+... ....+..+....... ..........++
T Consensus 1205 G~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 1273 (4334)
T PRK05691 1205 GGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDSW-----------PSQAPGLHLHGD 1273 (4334)
T ss_pred CCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeecccccccc-----------CCCCCCCCCCCC
Confidence 99999999999999999999999999999988765544332 112222221111000 001111235678
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC---CCC
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG---KFD 263 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~~ 263 (349)
++++++|||||||.||||+++|+++.+.+.+....++ +.++++++...|++|+.++..++.+|+.|+++++.+ .++
T Consensus 1274 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~ 1352 (4334)
T PRK05691 1274 NLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYA-LDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRD 1352 (4334)
T ss_pred CeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcC-CCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCC
Confidence 9999999999999999999999999999988888887 789999999999999999999999999999999985 468
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
+..+++.++++++|++.++|++++.|.+.. . ...+++||.+++||+++++++.++|.+.+|+. .+++.||.
T Consensus 1353 ~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~-~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~--~l~n~YG~ 1423 (4334)
T PRK05691 1353 PQRIAELVQQYGVTTLHFVPPLLQLFIDEP-L--AAACTSLRRLFSGGEALPAELRNRVLQRLPQV--QLHNRYGP 1423 (4334)
T ss_pred HHHHHHHHHHcCCeEEECcHHHHHHHHhCc-c--cccCCcccEEEEeecCCCHHHHHHHHHhCCCc--EEEeCCCc
Confidence 999999999999999999999999998754 2 34578999999999999999999999998654 23444443
No 91
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2e-35 Score=282.91 Aligned_cols=304 Identities=22% Similarity=0.268 Sum_probs=234.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+.+...+ ..+ |+++|+++. ++.+||.||.++++++|+.|.+ .|+.+||+|+++++|+.+++++++||+++
T Consensus 21 ~~~~~~~~~~~--~~~-p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 94 (541)
T TIGR03205 21 GTLPDLLSKAA--ADY-GPRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALKA 94 (541)
T ss_pred CCHHHHHHHHH--HHc-CCCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 58999999999 889 999999986 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc--ccc----cc-cCcceEEeCCCCccccccc-----cCC------
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA--HKI----PQ-LKYGTVLLDSPEFEPLSAT-----DSL------ 169 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~--~~~----~~-~~~~~~~~~~~~~~~~~~~-----~~~------ 169 (349)
|++++|+++..+.+++.++++.++++++++++... ... .. .-..+++.+...+...... ...
T Consensus 95 G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (541)
T TIGR03205 95 GARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYA 174 (541)
T ss_pred CeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHH
Confidence 99999999999999999999999999999976311 110 00 0112222222111100000 000
Q ss_pred CC-CCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc-----cccCCCCCcEEEEecChhhHhhH
Q 045351 170 DY-YDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA-----VRAARSRPAVVLCTVPYFHSYGF 243 (349)
Q Consensus 170 ~~-~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-----~~~~~~~~~~~l~~~p~~~~~g~ 243 (349)
.+ .............+++.++++|||||||.||+|+++|+++......... ... ....+++++..|++|.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 175 DFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRAT-RGDVERVICVLPLFHIYAL 253 (541)
T ss_pred HHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhccccccc-CCCCceEEEeccHHHHHHH
Confidence 00 0000011112356789999999999999999999999998765432211 111 2345789999999999998
Q ss_pred -HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHH
Q 045351 244 -TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKY 322 (349)
Q Consensus 244 -~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~ 322 (349)
..++.++..|+++++...+++..+++.|+++++|++.++|.++..|.+.. .....+++++|.+++||+++++++.+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDP-SLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCc-cccccCccccceEEEccccCCHHHHHHH
Confidence 56778999999999998899999999999999999999999999998765 4555678899999999999999999998
Q ss_pred HHHcC--CcccccccccCc
Q 045351 323 LQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 323 ~~~~~--~~~~~~~~~~G~ 339 (349)
.+.++ ....|+.+|.|.
T Consensus 333 ~~~~~~~~~~~YG~TE~~~ 351 (541)
T TIGR03205 333 ERKTGLKLKSGWGMTETCS 351 (541)
T ss_pred HHHhCCCeecccccccCCc
Confidence 88774 233455666553
No 92
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.3e-35 Score=285.57 Aligned_cols=301 Identities=18% Similarity=0.215 Sum_probs=227.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|..+.+...+ ..+ |+++|++++ ++.+||+||.++++++|..|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 20 ~~~~~~~~~~~--~~~-p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~~~ 93 (567)
T PLN02479 20 LTPLWFLERAA--VVH-PTRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVPMA 93 (567)
T ss_pred cCHHHHHHHHH--hhC-CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHhC
Confidence 56888888888 889 999999986 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc------------cCc-ceEEeCCCCcc--c---cccccCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ------------LKY-GTVLLDSPEFE--P---LSATDSL 169 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~------------~~~-~~~~~~~~~~~--~---~~~~~~~ 169 (349)
|++++|+++..+.+++.++++.++++++++++...+...+ ... .++.++..... . .......
T Consensus 94 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
T PLN02479 94 GAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAI 173 (567)
T ss_pred CcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcc
Confidence 9999999999999999999999999999998765432211 001 12222211000 0 0000000
Q ss_pred CC----CCCCcc-ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH
Q 045351 170 DY----YDDDEE-RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT 244 (349)
Q Consensus 170 ~~----~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~ 244 (349)
.+ ...... ........++.++++|||||||.||||++||+++..........++ +..++++++..|++|.+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~h~~~~~ 252 (567)
T PLN02479 174 EYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWG-MNEGAVYLWTLPMFHCNGWC 252 (567)
T ss_pred cHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcC-CCCCCEEEEecchhhhhhHH
Confidence 00 000000 0011223346788999999999999999999998876665555666 68889999999999999985
Q ss_pred HHHh-hhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCC-CCCcchheehccCCCCCHHHHHHH
Q 045351 245 CCLR-SLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDG-YDLSSIEVVASGGAHLTLSVIRKY 322 (349)
Q Consensus 245 ~~~~-~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~-~~l~~lr~i~~gG~~l~~~~~~~~ 322 (349)
..+. .+..|.+ +++..+++..+++.++++++|++.++|.+++.|.+.. .... .++++++.++++|+++++++.+++
T Consensus 253 ~~~~~~~~~g~~-~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~l~~~~~~G~~~~~~~~~~~ 330 (567)
T PLN02479 253 FTWTLAALCGTN-ICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAP-KSETILPLPRVVHVMTAGAAPPPSVLFAM 330 (567)
T ss_pred HHHHHHhhcCce-EeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhh-hhcccccccceeEEEEcCCCCCHHHHHHH
Confidence 4443 4555554 4556789999999999999999999999999998764 3222 257899999999999999999998
Q ss_pred HHH-cCCccccccccc
Q 045351 323 LQL-NRTVNRQLCLEF 337 (349)
Q Consensus 323 ~~~-~~~~~~~~~~~~ 337 (349)
.+. .+..+.|+.+|.
T Consensus 331 ~~~~~~~~~~yG~tE~ 346 (567)
T PLN02479 331 SEKGFRVTHTYGLSET 346 (567)
T ss_pred HhcCCceecccccccc
Confidence 764 223334455665
No 93
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-35 Score=284.86 Aligned_cols=304 Identities=24% Similarity=0.320 Sum_probs=234.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+++.+.+...+ ..+ |+++|+++. ++.+||+||++++.++|+.|.+ .|+++||+|+++++|+.++++++|||+++
T Consensus 24 ~~~~~~~~~~a--~~~-p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (563)
T PRK06710 24 QPLHKYVEQMA--SRY-PEKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLLA 97 (563)
T ss_pred ccHHHHHHHHH--HHC-CCceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 57899999999 889 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----CcceEEeC-CCCccc----------------cccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYGTVLLD-SPEFEP----------------LSAT 166 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~-~~~~~~----------------~~~~ 166 (349)
|++++|++|..+.+++.++++.++++++++++.....+... ....+.+. ...+.. ....
T Consensus 98 G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (563)
T PRK06710 98 GGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVK 177 (563)
T ss_pred CeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccc
Confidence 99999999999999999999999999999987543322210 11111110 000000 0000
Q ss_pred cCC--------CCCCCC-ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc-cccCCCCCcEEEEecC
Q 045351 167 DSL--------DYYDDD-EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA-VRAARSRPAVVLCTVP 236 (349)
Q Consensus 167 ~~~--------~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~l~~~p 236 (349)
.+. ...... .........+++.++++|||||||.||+|.++|+++......... .+.....++++++..|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p 257 (563)
T PRK06710 178 VSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLP 257 (563)
T ss_pred ccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCc
Confidence 000 000000 000011123578999999999999999999999999765433222 2221234568899999
Q ss_pred hhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCC
Q 045351 237 YFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLT 315 (349)
Q Consensus 237 ~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~ 315 (349)
++|.+|+ ..++.+++.|+++++.+.+++..+++.|+++++|++.++|.++..+.+.. .....+++++|.+++||++++
T Consensus 258 ~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~v~~gg~~~~ 336 (563)
T PRK06710 258 FFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSP-LLKEYDISSIRACISGSAPLP 336 (563)
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCC-ccccCChhhhhheeeCCCcCC
Confidence 9999998 55667999999999998899999999999999999999999999999876 555667789999999999999
Q ss_pred HHHHHHHHHHcC--CcccccccccC
Q 045351 316 LSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 316 ~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
+++.+++.+.++ ..+.|+.+|.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~YG~tE~~ 361 (563)
T PRK06710 337 VEVQEKFETVTGGKLVEGYGLTESS 361 (563)
T ss_pred HHHHHHHHHhhCCCEecccccccCc
Confidence 999999988874 33445556654
No 94
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-35 Score=284.48 Aligned_cols=305 Identities=21% Similarity=0.255 Sum_probs=233.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ ..+ |+++|+++. ++.+||.||.++++++|+.|.++.|+++||+|+++++|+++++++++||+++
T Consensus 24 ~~~~~~l~~~~--~~~-p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~ 98 (562)
T PRK12492 24 KSVVEVFERSC--KKF-ADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRA 98 (562)
T ss_pred CcHHHHHHHHH--HhC-CCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 57999999999 889 999999876 7899999999999999999987239999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----Ccc-eEEeCC----CCcccc--------cccc-CC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYG-TVLLDS----PEFEPL--------SATD-SL 169 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~-~~~~~~----~~~~~~--------~~~~-~~ 169 (349)
|++++|+++..+.+++.++++.++++++++++.....+... ... ++.... ..+... .... ..
T Consensus 99 G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 99 GLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred CeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccc
Confidence 99999999999999999999999999999876543322110 000 000000 000000 0000 00
Q ss_pred -CCC----------C-CCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccC--------CC-CC
Q 045351 170 -DYY----------D-DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAA--------RS-RP 228 (349)
Q Consensus 170 -~~~----------~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--------~~-~~ 228 (349)
... . ............+++++|+|||||||.||||+++|+++...+......+.. +. .+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQ 258 (562)
T ss_pred cCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCC
Confidence 000 0 000011124566899999999999999999999999998776654433320 11 24
Q ss_pred cEEEEecChhhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchhe
Q 045351 229 AVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEV 306 (349)
Q Consensus 229 ~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~ 306 (349)
++++..+|++|.+|+ ..++..+..|++.++. ..+++..+++.++++++|++..+|.++..|...+ .....+++++|.
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~ 337 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHP-GFKDLDFSALKL 337 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCc-CcccccccceeE
Confidence 578999999999999 5677788899987766 4578999999999999999999999999999886 666677899999
Q ss_pred ehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 307 VASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 307 i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
+++||+++++++.+.+.+.++. .+.|+.+|.|
T Consensus 338 ~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 371 (562)
T PRK12492 338 TNSGGTALVKATAERWEQLTGCTIVEGYGLTETS 371 (562)
T ss_pred EEeccccCCHHHHHHHHHHhCCceeeccCccccC
Confidence 9999999999999999987742 2334556654
No 95
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-35 Score=282.37 Aligned_cols=303 Identities=18% Similarity=0.188 Sum_probs=233.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+++.++|...+ +.+ |+++|+++. ++.+||++|.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 18 ~~~~~~~~~~~--~~~-~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 91 (545)
T PRK08162 18 LTPLSFLERAA--EVY-PDRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPMA 91 (545)
T ss_pred CCHHHHHHHHH--HHC-CCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 68889999999 889 999999987 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-CcceEEeCCC--Cccc--cccccC-CCCCCC-Cc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KYGTVLLDSP--EFEP--LSATDS-LDYYDD-DE 176 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~~~~~~~~~--~~~~--~~~~~~-~~~~~~-~~ 176 (349)
|++++|+++..+.+++.++++.+++++++++.+....+.+ . ..+.+.++.. .... ...... ..+... ..
T Consensus 92 G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (545)
T PRK08162 92 GAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP 171 (545)
T ss_pred CcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc
Confidence 9999999999999999999999999999999876554332 1 1112222211 0000 000000 000000 00
Q ss_pred c-ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCE
Q 045351 177 E-RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGES 255 (349)
Q Consensus 177 ~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~ 255 (349)
. ........++.++|+|||||||.||||+++|+++..........+. +..++++++.+|++|.+|+...+...+.|++
T Consensus 172 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~-~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~ 250 (545)
T PRK08162 172 DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWG-MPKHPVYLWTLPMFHCNGWCFPWTVAARAGT 250 (545)
T ss_pred cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC-CCCCCeeEeccCcHhhhhHHHHHHHHHHccE
Confidence 0 0111233457899999999999999999999998777666555555 6788899999999999998555555567777
Q ss_pred EEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccc
Q 045351 256 LVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLC 334 (349)
Q Consensus 256 ~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~ 334 (349)
.++...+++..+++.++++++|++.++|.+++.|.+.. ......+.+.+.+++||+++++++.+.+.+.. +..+.|+.
T Consensus 251 ~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~ 329 (545)
T PRK08162 251 NVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAP-AEWRAGIDHPVHAMVAGAAPPAAVIAKMEEIGFDLTHVYGL 329 (545)
T ss_pred EEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCc-cccccCCccceEEEECCCCCCHHHHHHHHHhCCceeecccc
Confidence 77777899999999999999999999999999999875 44334456667778999999999999887642 23344555
Q ss_pred cccC
Q 045351 335 LEFG 338 (349)
Q Consensus 335 ~~~G 338 (349)
+|.+
T Consensus 330 tE~~ 333 (545)
T PRK08162 330 TETY 333 (545)
T ss_pred cccC
Confidence 6654
No 96
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-35 Score=285.57 Aligned_cols=284 Identities=15% Similarity=0.139 Sum_probs=221.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCC--CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTAS--RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
.++.+.+...+ ..+ ++..++ +.+. .+.+||.||++++.++|+.|.+ .|+++||+|+++++|+++++++++||+
T Consensus 21 ~~~~~~~~~~~--~~~-~~~~~~-~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~ 95 (579)
T PRK09192 21 PTLVEALDYAA--LGE-AGMNFY-DRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFACQ 95 (579)
T ss_pred hhHHHHHHHhh--ccC-CceEEE-ecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHHH
Confidence 68999999999 778 766554 4322 2789999999999999999998 999999999999999999999999999
Q ss_pred hcCCeEecCCCCCC-------HHHHHHHHhhcCCeEEEEcCccccccccc--Ccc-eEEeCCCCccccccccCCCCCCCC
Q 045351 106 SLGVVVSPCNPSCT-------IPEILRQIHLSKPVIAFATHDTAHKIPQL--KYG-TVLLDSPEFEPLSATDSLDYYDDD 175 (349)
Q Consensus 106 ~~G~~~v~i~~~~~-------~~~l~~~l~~~~~~~i~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
++|++++|+++..+ .+++.++++.++++++++++...+.+... ... .+... +..+.... .
T Consensus 96 ~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~ 165 (579)
T PRK09192 96 YAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVLS---HAWFKALP-------E 165 (579)
T ss_pred HcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccceee---hhhhcccC-------C
Confidence 99999999976443 68999999999999999988655443321 111 11111 11111110 0
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc-cccCCCCCcEEEEecChhhHhhH-HHHHhhhhcC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA-VRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMG 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G 253 (349)
.........++++++++|||||||.||||.++|++++..+..... .++ +..+++++.++|++|.+|+ ..++.++..|
T Consensus 166 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g 244 (579)
T PRK09192 166 ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLK-VRPGDRCVSWLPFYHDMGLVGFLLTPVATQ 244 (579)
T ss_pred CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhccc-CCCCCeEEEeCCCCCcchhHHHHHHHHHhC
Confidence 001112346689999999999999999999999999998877666 566 7889999999999999999 4566789999
Q ss_pred CEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcC--CCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 254 ESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG--GTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 254 ~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~--~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
+++++.+. .++..+++.+.+++++.++..|.++..+.... ......+++++|.+++||+++++.+++.+.+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~ 324 (579)
T PRK09192 245 LSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFA 324 (579)
T ss_pred CeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHH
Confidence 99987752 27899999999999997776555555444322 0233467889999999999999999999999874
No 97
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=5.7e-35 Score=277.68 Aligned_cols=296 Identities=20% Similarity=0.258 Sum_probs=233.6
Q ss_pred hhhhhcc-cCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 31 TSYVFSL-LESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 31 ~~~l~~~-~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
.+.+..+ + +.+ ||++|+++. ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+.+++++++||+++|+
T Consensus 7 ~~~~~~~~~--~~~-p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~ 80 (508)
T TIGR02262 7 EDLLDRNVV--EGR-GGKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGAIRAGI 80 (508)
T ss_pred HHHHHHHHh--ccc-CCceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 3444554 5 668 999999986 7899999999999999999998 9999999999999999999999999999999
Q ss_pred eEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----C-cceEEeCCCCc--cccccccCCCCCCCCcccccc
Q 045351 110 VVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----K-YGTVLLDSPEF--EPLSATDSLDYYDDDEERVRV 181 (349)
Q Consensus 110 ~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 181 (349)
+++|+++..+.+++.++++.++++++++++...+.+.+. . ..++..+.... ..+...... ........
T Consensus 81 ~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (508)
T TIGR02262 81 VPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLAT----ESEQFKPA 156 (508)
T ss_pred EEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhc----CCCccCCC
Confidence 999999999999999999999999999987655433221 1 11222222110 011000000 01111122
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM 259 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 259 (349)
...++++++++|||||||.||+|.++|+++...+.. ....++ +..+++++...|++|.+++ ..++.++..|+++++.
T Consensus 157 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 235 (508)
T TIGR02262 157 ATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLG-IREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM 235 (508)
T ss_pred CCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcC-CCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe
Confidence 455789999999999999999999999999987765 344445 6889999999999999999 5677889999999888
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccc
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLE 336 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~ 336 (349)
+ .+++..+++.|+++++|.+.++|.++..+.... ........++|.+++||+++++++.+.|.+.++. .+.|+.+|
T Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~-~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 314 (508)
T TIGR02262 236 GERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADP-NLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTE 314 (508)
T ss_pred CCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCc-cccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccc
Confidence 5 468999999999999999999999999888765 4444456789999999999999999999998843 23345566
Q ss_pred cC
Q 045351 337 FG 338 (349)
Q Consensus 337 ~G 338 (349)
.|
T Consensus 315 ~~ 316 (508)
T TIGR02262 315 ML 316 (508)
T ss_pred cC
Confidence 55
No 98
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-35 Score=286.29 Aligned_cols=282 Identities=17% Similarity=0.242 Sum_probs=219.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-------CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-------SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
+++.+.|...+ ..+ |+++|+++.+ ..+.+||.||..++.++|+.|.+ .| .+||+|+++++|+++++++
T Consensus 1 ~s~~~~l~~~a--~~~-p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~~ 75 (578)
T PRK05850 1 SSVPSLLRERA--SLQ-PDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIVA 75 (578)
T ss_pred CcHHHHHHHHH--hcC-CCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHHH
Confidence 46788999999 889 9999998642 13789999999999999999998 89 6899999999999999999
Q ss_pred HHHHHhcCCeEecCCC---CCCHHHHHHHHhhcCCeEEEEcCccccccccc-------Cc-ceEEeCCCCccccccccCC
Q 045351 101 YLSLFSLGVVVSPCNP---SCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-------KY-GTVLLDSPEFEPLSATDSL 169 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~ 169 (349)
+|||+++|++++|+++ ..+.+++.++++.+++++++++++....+... .. .++..+..+ ..
T Consensus 76 ~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----- 147 (578)
T PRK05850 76 FLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLD---LD----- 147 (578)
T ss_pred HHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccc---cc-----
Confidence 9999999999999997 45788999999999999999988655444321 00 111111100 00
Q ss_pred CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc-c----CCCCCcEEEEecChhhHhhH-
Q 045351 170 DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR-A----ARSRPAVVLCTVPYFHSYGF- 243 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~----~~~~~~~~l~~~p~~~~~g~- 243 (349)
...........++++++|+|||||||.||||.++|++++..+......+ . ....++++++.+|++|..|+
T Consensus 148 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 223 (578)
T PRK05850 148 ----SPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLV 223 (578)
T ss_pred ----cCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhH
Confidence 0000111234668999999999999999999999999988776554332 1 02457899999999999998
Q ss_pred HHHHhhhhcCCEEEEcCCC----CHHHHHHHHHhhcccEEEechHHHHHHHhc-C--CCCCCCCCcchheehccCCCCCH
Q 045351 244 TCCLRSLGMGESLVCMGKF----DFGRMLKAVEEFRVSHVVLAPPVVLKMARD-G--GTMDGYDLSSIEVVASGGAHLTL 316 (349)
Q Consensus 244 ~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~-~--~~~~~~~l~~lr~i~~gG~~l~~ 316 (349)
..++.+++.|+++++.+++ ++..+++.+++++++.+ .+|.++..+... . ......+++++|.+++||+++++
T Consensus 224 ~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~ 302 (578)
T PRK05850 224 LGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHP 302 (578)
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCH
Confidence 6788999999999998642 78999999999999855 566654443322 1 02234567899999999999999
Q ss_pred HHHHHHHHHcC
Q 045351 317 SVIRKYLQLNR 327 (349)
Q Consensus 317 ~~~~~~~~~~~ 327 (349)
++.++|.+.|+
T Consensus 303 ~~~~~~~~~~~ 313 (578)
T PRK05850 303 ATLKRFADRFA 313 (578)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 99
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-35 Score=281.87 Aligned_cols=305 Identities=21% Similarity=0.261 Sum_probs=235.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ +.+ |+++|+++. ++.+||.||.+++.++|..|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 23 ~~i~~~l~~~a--~~~-p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 96 (557)
T PRK07059 23 PSLADLLEESF--RQY-ADRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGARVAIMMPNVLQYPVAIAAVLRA 96 (557)
T ss_pred CCHHHHHHHHH--HHc-CCCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 58999999999 889 999999987 7899999999999999999999 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeCC-CCcc---cc------------cccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLDS-PEFE---PL------------SATD 167 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~-~~~~---~~------------~~~~ 167 (349)
|++++|+++..+.+++.++++.++++++++++.....+.. .....+.+.. .... .. ....
T Consensus 97 G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (557)
T PRK07059 97 GYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAW 176 (557)
T ss_pred CeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998765433321 1111111100 0000 00 0000
Q ss_pred --CCC------CC-CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc----ccC--CCCCcEEE
Q 045351 168 --SLD------YY-DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV----RAA--RSRPAVVL 232 (349)
Q Consensus 168 --~~~------~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~--~~~~~~~l 232 (349)
... .. ............++++++|+|||||||.||+|+++|++++.++...... +.. ......++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (557)
T PRK07059 177 SLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFV 256 (557)
T ss_pred CCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEE
Confidence 000 00 0001111234567899999999999999999999999998765432211 110 01245788
Q ss_pred EecChhhHhhH-HHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehcc
Q 045351 233 CTVPYFHSYGF-TCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASG 310 (349)
Q Consensus 233 ~~~p~~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~g 310 (349)
+.+|++|.+++ ...+.++..|++.++.+ ..++..+++.++++++|.+.++|.++..+.... ...+.+++++|.++.|
T Consensus 257 ~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-~~~~~~~~~l~~~~~g 335 (557)
T PRK07059 257 CALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNP-DFDKLDFSKLIVANGG 335 (557)
T ss_pred EeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCc-CcCcCCchhheEEEec
Confidence 89999999987 56678889999877775 458999999999999999999999999999886 6666778899999999
Q ss_pred CCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 311 GAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 311 G~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
|+++++.+.++|.+.++ ..+.|+.+|.|.
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 366 (557)
T PRK07059 336 GMAVQRPVAERWLEMTGCPITEGYGLSETSP 366 (557)
T ss_pred cccCCHHHHHHHHHHhCCCeeeccccccccc
Confidence 99999999999998874 334456666553
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-35 Score=296.37 Aligned_cols=295 Identities=16% Similarity=0.151 Sum_probs=227.3
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
..|+.++|..++ +.+ ||++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+|+++|+++++++++||++
T Consensus 446 ~~sl~~ll~~~a--~~~-pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~ 519 (994)
T PRK07868 446 RISLGRIIAEQA--RDA-PKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAALSR 519 (994)
T ss_pred CccHHHHHHHHH--HHC-CCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 478999999999 899 999999986 7899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCcc--------ccccccCCCCCCCCcc-
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFE--------PLSATDSLDYYDDDEE- 177 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~- 177 (349)
+|++++|++|. +++.++++.++++++|++.+..+.+.....++++++..... ......+. ......
T Consensus 520 aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 594 (994)
T PRK07868 520 LGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKI--DPDAVEL 594 (994)
T ss_pred cCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhc--CcccccC
Confidence 99999999984 68999999999999999876655443333444444321100 00000000 000000
Q ss_pred ---ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHH-hhhhcC
Q 045351 178 ---RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCL-RSLGMG 253 (349)
Q Consensus 178 ---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~-~~l~~G 253 (349)
.......++++++|+|| ||||.||++.++|.+...........+. +.++|++++.+|++|.+|+...+ ..+..|
T Consensus 595 ~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~-l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG 672 (994)
T PRK07868 595 PGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAA-LDRRDTVYCLTPLHHESGLLVSLGGAVVGG 672 (994)
T ss_pred CcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcC-CCCCCeEEEecChHHHhHHHHHHHHHhccc
Confidence 00112236899999998 6888888888888776655544445555 68899999999999999996554 455555
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC---cc
Q 045351 254 ESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT---VN 330 (349)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~---~~ 330 (349)
+++++.+++++..+++.|+++++|+++++|++++.|++.. .....++++||.++ |+.+++++++++.+.++. .+
T Consensus 673 ~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~-~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~ 749 (994)
T PRK07868 673 SRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDP-AFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVE 749 (994)
T ss_pred eEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCc-CCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheee
Confidence 5666667899999999999999999999999999999875 55556678999876 335999999999999863 33
Q ss_pred ccccccc
Q 045351 331 RQLCLEF 337 (349)
Q Consensus 331 ~~~~~~~ 337 (349)
.|+.||.
T Consensus 750 ~YG~TE~ 756 (994)
T PRK07868 750 FFATTDG 756 (994)
T ss_pred eeecccc
Confidence 4455553
No 101
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=5.4e-35 Score=281.08 Aligned_cols=326 Identities=19% Similarity=0.224 Sum_probs=242.1
Q ss_pred ccccceeeccCCCCCCCCCCC-cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045351 7 FCSETKIFHSLRPSIAFPPET-TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYD 85 (349)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd 85 (349)
.++.++.+.+.--..+++..+ .++.+.|...+ ..+ |+++|+++. ++.+||+||.+++.++|+.|..+.|+++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~-~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~ 77 (560)
T PRK08751 3 QARPWLQSYPAGVAAEIDLEQFRTVAEVFATSV--AKF-ADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGD 77 (560)
T ss_pred cccchhhhcCCCCCCccCCcCCCcHHHHHHHHH--HhC-CCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 344555554443333444211 57899999999 889 999999986 789999999999999999996338999999
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcc-eEEeCCCCc
Q 045351 86 VAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYG-TVLLDSPEF 160 (349)
Q Consensus 86 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~-~~~~~~~~~ 160 (349)
+|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++++++.....+.+ .... ++..+..+.
T Consensus 78 ~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (560)
T PRK08751 78 RVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDM 157 (560)
T ss_pred EEEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhh
Confidence 99999999999999999999999999999999999999999999999999998765433221 1111 111110000
Q ss_pred --------------------cccccccCCCCC-----CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHH
Q 045351 161 --------------------EPLSATDSLDYY-----DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAV 215 (349)
Q Consensus 161 --------------------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~ 215 (349)
..+.......+. ............++++++++|||||||.||+|.++|.++...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~ 237 (560)
T PRK08751 158 LGFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANM 237 (560)
T ss_pred cccccchhhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHH
Confidence 000000000000 0000011123456899999999999999999999999998877
Q ss_pred hhhhcccc---CCC-CCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 216 AGGHAVRA---ARS-RPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 216 ~~~~~~~~---~~~-~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
......+. .+. .++++++..|++|.+++ ...+.++..|++.++. ..+++..+++.++++++|++.++|.++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 317 (560)
T PRK08751 238 QQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGL 317 (560)
T ss_pred HHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHH
Confidence 65443332 012 34677889999999998 4556777788887666 467899999999999999999999999999
Q ss_pred HhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 290 ARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 290 ~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
.+.. ...+.+++++|.+++||+++++++.+.+.+.++. .+.|+.+|.|
T Consensus 318 ~~~~-~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 367 (560)
T PRK08751 318 LNTP-GFDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETS 367 (560)
T ss_pred HcCc-CcCCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCC
Confidence 9876 5666778899999999999999999999988742 3344556654
No 102
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=271.21 Aligned_cols=309 Identities=18% Similarity=0.199 Sum_probs=239.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC------CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA------SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY 101 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~------~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~ 101 (349)
.|+++.+...+ ..+ ++.+++-... .-+++||+|.++++.+++..|+. +|+++++.|+|+..|++||++..
T Consensus 75 ~T~~~~f~~~~--~~~-~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 75 LTLYEGFRRSV--EKS-GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred ccHHHHhhcch--hcc-CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCChhhHHhH
Confidence 89999999999 999 9999996542 23899999999999999999997 99999999999999999999999
Q ss_pred HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC-cccccccc------c-Ccc-eEEeCCCC-------------
Q 045351 102 LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH-DTAHKIPQ------L-KYG-TVLLDSPE------------- 159 (349)
Q Consensus 102 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~-~~~~~~~~------~-~~~-~~~~~~~~------------- 159 (349)
+||...|.+.+|+...++++++.+++..++..++|+|+ +....+.+ . ..+ ++.++...
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~ 230 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVE 230 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeE
Confidence 99999999999999999999999999999999999994 33333222 0 122 44444321
Q ss_pred ---ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhh---hccccC--CCCCcEE
Q 045351 160 ---FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGG---HAVRAA--RSRPAVV 231 (349)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~--~~~~~~~ 231 (349)
|+++.+-+.. ...... .+..|+|.|.|+|||||||.||||++||+|+++.+... ...... ...+|++
T Consensus 231 v~S~~e~~~lG~~----~~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~ 305 (691)
T KOG1256|consen 231 VYSWDEFEELGKK----NQRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVY 305 (691)
T ss_pred EEEHHHHHhhccc----ccCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceE
Confidence 2222222211 112222 57899999999999999999999999999999966531 111110 2336999
Q ss_pred EEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC------------------
Q 045351 232 LCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG------------------ 293 (349)
Q Consensus 232 l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~------------------ 293 (349)
++++|+.|++....-...++.|+.+.+..+ |+..+.+.|++.++|.+.++|-+|+++.+.-
T Consensus 306 lSyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 306 LSYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EEeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 999999999999777777799999999975 9999999999999999999999997765321
Q ss_pred -----------CCCC-CCCC--------------cchheehccCCCCCHHHHHHHHHHcCCccc--ccccccCceeeecC
Q 045351 294 -----------GTMD-GYDL--------------SSIEVVASGGAHLTLSVIRKYLQLNRTVNR--QLCLEFGAPIISLS 345 (349)
Q Consensus 294 -----------~~~~-~~~l--------------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~--~~~~~~G~~~i~~~ 345 (349)
+... ...+ .++|.+++|++|+++++.+.++..+++... |+.||+-++.+...
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEecc
Confidence 0000 0000 478999999999999999999999865433 34466654444444
Q ss_pred C
Q 045351 346 K 346 (349)
Q Consensus 346 ~ 346 (349)
+
T Consensus 465 ~ 465 (691)
T KOG1256|consen 465 P 465 (691)
T ss_pred C
Confidence 3
No 103
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-34 Score=273.23 Aligned_cols=266 Identities=20% Similarity=0.180 Sum_probs=220.0
Q ss_pred CCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCH
Q 045351 41 HAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTI 120 (349)
Q Consensus 41 ~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~ 120 (349)
+.. ++++|++++ ++++||+||.++++++|..|+. +|+|+++++|+++++++++||+++|++++|+++..+.
T Consensus 11 ~~~-~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~------~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~ 81 (471)
T PRK07787 11 AAA-DIADAVRIG--GRVLSRSDLAGAATAVAERVAG------ARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGV 81 (471)
T ss_pred ccc-CCceEEEeC--CcEEEHHHHHHHHHHHHHHhcc------CCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCh
Confidence 455 899999997 8999999999999999999873 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCC
Q 045351 121 PEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGM 200 (349)
Q Consensus 121 ~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 200 (349)
+++.++++++++++++++.... ... ......... . .. ........++++++++|||||||.
T Consensus 82 ~~l~~~l~~~~~~~il~~~~~~--~~~--~~~~~~~~~-~----~~----------~~~~~~~~~~~~a~i~~TSGTTG~ 142 (471)
T PRK07787 82 AERRHILADSGAQAWLGPAPDD--PAG--LPHVPVRLH-A----RS----------WHRYPEPDPDAPALIVYTSGTTGP 142 (471)
T ss_pred HHHHHHHHhcCCCEEEecCCcc--ccc--ccceeeecc-c----cc----------cccCCCCCCCceEEEEECCCCCCC
Confidence 9999999999999999976311 001 111000000 0 00 000112456899999999999999
Q ss_pred CceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEE
Q 045351 201 VKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 201 pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l 279 (349)
||+|.++|+++...+......++ +..++++++.+|++|.+|+ ..++.+++.|+++++.+.+++..+++.++ +++|++
T Consensus 143 PK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 143 PKGVVLSRRAIAADLDALAEAWQ-WTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred CCEEEEeHHHHHHHHHHHHHhcC-CCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEE
Confidence 99999999999999888777777 6889999999999999998 67889999999999999899999999999 999999
Q ss_pred EechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 280 VLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 280 ~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
.++|.++..|.+.. .....++++|.+++||+++++++++++.+.++. .+.|+.+|.|
T Consensus 221 ~~~P~~~~~l~~~~--~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 279 (471)
T PRK07787 221 FGVPTVWSRIAADP--EAARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETL 279 (471)
T ss_pred EcchHHHHHHHhCc--cccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccC
Confidence 99999999998763 233467899999999999999999999988743 2334455544
No 104
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-35 Score=276.33 Aligned_cols=292 Identities=21% Similarity=0.230 Sum_probs=220.7
Q ss_pred cccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC
Q 045351 36 SLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 36 ~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~ 115 (349)
..+ ..+ |+++|+++.++++.+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++|++
T Consensus 5 ~~a--~~~-p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 5 THA--QIA-PDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAIN 80 (501)
T ss_pred hhh--hhC-CCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccc
Confidence 345 667 999999986567899999999999999999998 9999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcccccccccC--cce-EEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEE
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK--YGT-VLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAIL 192 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 192 (349)
+..+.+++.++++.++++++++++.......... ... +.+.. ...... ..+. ............++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~----~~~~~~~~~~~~~~~a~i~ 154 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGG-EIDGFG-SFEA----ALAGAGPRLTEQPCGAVML 154 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecC-cccccc-cHHH----HhcccCCCCCCCcccEEEE
Confidence 9999999999999999999999765432221111 111 11111 000000 0000 0000000111223579999
Q ss_pred eccCCCCCCceeee--chhhHHHHHh----hhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHH
Q 045351 193 YSSGTTGMVKGALL--TQRNLVAAVA----GGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGR 266 (349)
Q Consensus 193 ~TSGtTG~pK~v~~--t~~~l~~~~~----~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~ 266 (349)
|||||||.||||++ +|+++..... .....+. +..+++++...|++|.+++...+..+..|+++++.+.+++..
T Consensus 155 ~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (501)
T PRK13390 155 YSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYD-ISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQA 233 (501)
T ss_pred eCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhC-CCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHH
Confidence 99999999999995 5565544221 1122344 678899999999999999855556678899999999899999
Q ss_pred HHHHHHhhcccEEEechHHHHHHHhcCC-CCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccC
Q 045351 267 MLKAVEEFRVSHVVLAPPVVLKMARDGG-TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFG 338 (349)
Q Consensus 267 ~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G 338 (349)
+++.|+++++|++.++|.++..|.+... .....+++++|.+++||+++++++.+.+.+.++. .+.|+.+|.|
T Consensus 234 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 308 (501)
T PRK13390 234 TLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAH 308 (501)
T ss_pred HHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccC
Confidence 9999999999999999999999987530 1244567899999999999999999999988752 2334556654
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.1e-35 Score=301.73 Aligned_cols=303 Identities=18% Similarity=0.164 Sum_probs=236.9
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.+.+.+ +++++++.|+.+. +++++||+||+++++++|+.|++ |+++||+|+++++|+++++++++||+++
T Consensus 631 ~~~~~~l~~~~--~~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~--g~~~gd~V~i~~~n~~~~~~~~la~~~~ 705 (1140)
T PRK06814 631 RTLFEALIEAA--KIHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK--NTPPGENVGVMLPNANGAAVTFFALQSA 705 (1140)
T ss_pred CCHHHHHHHHH--HHcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHHHC
Confidence 56778888888 7772466777663 36899999999999999999964 9999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccc------cc--CcceEEeCCCCc-cccccccCCCCCCCCccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIP------QL--KYGTVLLDSPEF-EPLSATDSLDYYDDDEER 178 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~------~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 178 (349)
|++++|+++..+.+++.++++++++++++++++..+... +. ...++.++.... .......+..........
T Consensus 706 G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1140)
T PRK06814 706 GRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFPLV 785 (1140)
T ss_pred CCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCCcc
Confidence 999999999999999999999999999999875443211 11 122333332100 000000000000000000
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEE
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLV 257 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v 257 (349)
......++++++++|||||||.||||.+||+++...+......++ +.++|++++.+|++|.+|+ ..++.++..|++++
T Consensus 786 ~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~ 864 (1140)
T PRK06814 786 YFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARID-FSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVF 864 (1140)
T ss_pred ccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhC-CCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEE
Confidence 111356799999999999999999999999999998888777777 7899999999999999999 77889999999999
Q ss_pred EcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccc
Q 045351 258 CMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLC 334 (349)
Q Consensus 258 ~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~ 334 (349)
+.+ .++...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++||+++++++.+++.+.++. .+.|+.
T Consensus 865 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~---~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~ 941 (1140)
T PRK06814 865 LYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA---HPYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGV 941 (1140)
T ss_pred EecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc---ccccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEecccc
Confidence 886 457788899999999999999999999987753 34567899999999999999999999998842 344566
Q ss_pred cccCc
Q 045351 335 LEFGA 339 (349)
Q Consensus 335 ~~~G~ 339 (349)
||.|.
T Consensus 942 TE~~~ 946 (1140)
T PRK06814 942 TETAP 946 (1140)
T ss_pred ccccc
Confidence 66654
No 106
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-34 Score=266.80 Aligned_cols=247 Identities=17% Similarity=0.141 Sum_probs=213.1
Q ss_pred EEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhh
Q 045351 50 LIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHL 129 (349)
Q Consensus 50 i~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~ 129 (349)
++++ ++.+||.||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~--~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~ 77 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ--FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKR 77 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHh
Confidence 5565 789999999999999999985 589999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechh
Q 045351 130 SKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQR 209 (349)
Q Consensus 130 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~ 209 (349)
++++++++++.... . .. .....++++++++|||||||.||+|.+||+
T Consensus 78 ~~~~~~i~~~~~~~-----------~---------~~-------------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~ 124 (414)
T PRK08308 78 AGCHGLLYGESDFT-----------K---------LE-------------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWT 124 (414)
T ss_pred CCCCEEEecCcccc-----------c---------cc-------------CCCCCCCCceEEEECCCCCCCCcEEEEehH
Confidence 99999998752100 0 00 002346789999999999999999999999
Q ss_pred hHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHH
Q 045351 210 NLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLK 288 (349)
Q Consensus 210 ~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (349)
++...+..+...+. ...+++++...|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|+++++|.++..
T Consensus 125 ~l~~~~~~~~~~~~-~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~ 203 (414)
T PRK08308 125 EIDREIEAYNEALN-CEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHI 203 (414)
T ss_pred hHHHHHHHHHHhhC-CCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHH
Confidence 99998888777777 6788999999999999998 678899999999999998999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCc
Q 045351 289 MARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGA 339 (349)
Q Consensus 289 l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~ 339 (349)
|.+.. .. ..+++.+++||+++++++.+++.+.. +..+.|+.+|.|+
T Consensus 204 l~~~~-~~----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 204 LGRLL-PG----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGC 250 (414)
T ss_pred HHhcC-Cc----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCC
Confidence 98764 22 13688899999999999999998875 2334466677654
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-34 Score=269.72 Aligned_cols=274 Identities=21% Similarity=0.235 Sum_probs=222.0
Q ss_pred chhhhhh-cccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 29 SVTSYVF-SLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 29 tl~~~l~-~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
++.+++. ..+ +.+ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~a--~~~-~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~~ 76 (458)
T PRK09029 3 IFSDWPWRHWA--QVR-PQAIALRLN--DEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQC 76 (458)
T ss_pred hhhcChHHHHH--HhC-CCceeeecC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 4555553 346 778 999999976 8899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++..+++++++++++++++... +... ...... . ..........+++
T Consensus 77 G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-------~~~~~~----~--------~~~~~~~~~~~~~ 136 (458)
T PRK09029 77 GARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL-------TSLHLQ----L--------VEGAHAVAWQPQR 136 (458)
T ss_pred CCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc-------cccccc----c--------ccccCcccCCCCC
Confidence 999999999999999999999999999998775432 1110 000000 0 0001122456789
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRM 267 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~ 267 (349)
+++++|||||||.||||.+||++++..+......++ +..+++++...|++|.+|+..++.+|..|+++++.+. ..+
T Consensus 137 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~ 212 (458)
T PRK09029 137 LATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMP-FTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPL 212 (458)
T ss_pred eEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCC-CCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHH
Confidence 999999999999999999999999999888877777 6889999999999999999877889999999999864 456
Q ss_pred HHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCc
Q 045351 268 LKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGA 339 (349)
Q Consensus 268 ~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~ 339 (349)
++.+ .++|.+..+|.++..|.... .. ..++|.+++||+++++.+.+++.+.. +..+.|+.+|.|.
T Consensus 213 ~~~i--~~~t~~~~~P~~~~~l~~~~-~~----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~ 278 (458)
T PRK09029 213 EQAL--AGCTHASLVPTQLWRLLDNR-SE----PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEMAS 278 (458)
T ss_pred HHHH--hhceeeecChHHHHHHHhcc-cc----CCcceEEEECCCCCCHHHHHHHHHcCCcEeccccccccCc
Confidence 6666 37899999999999998764 32 34799999999999999999887641 2223345566553
No 108
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.3e-34 Score=265.99 Aligned_cols=268 Identities=20% Similarity=0.215 Sum_probs=222.0
Q ss_pred eHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 60 LYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 60 Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
||+||.+.+.++|+.|.++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999657999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh
Q 045351 140 DTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH 219 (349)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 219 (349)
.....+..........+.......... ............+++++++|||||||.||+|.+||+++...+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~ 153 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELAALDDA-------PAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLA 153 (408)
T ss_pred chhhhccccCCceEEechhhhhhcccc-------cccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHH
Confidence 766655443323333321111110000 0001111124578999999999999999999999999999998888
Q ss_pred ccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCC---HHHHHHHHHhhcccEEEechHHHHHHHhcCCCC
Q 045351 220 AVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFD---FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM 296 (349)
Q Consensus 220 ~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 296 (349)
..+. +..++++++..|++|.+++..++.++..|+++++.+..+ +..+.+.++++++|.+.++|.+++.|.+.. .
T Consensus 154 ~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~-~- 230 (408)
T TIGR01733 154 RRYG-LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAAL-P- 230 (408)
T ss_pred HhcC-CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhh-h-
Confidence 8777 688999999999999999999999999999999997543 689999999999999999999999999875 3
Q ss_pred CCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 297 DGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 297 ~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
.++++||.+++||+++++++++++.+.++.. ..|+.+|.|.
T Consensus 231 --~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~ 274 (408)
T TIGR01733 231 --PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTV 274 (408)
T ss_pred --hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEE
Confidence 5688999999999999999999999998732 2344566553
No 109
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-34 Score=272.30 Aligned_cols=294 Identities=21% Similarity=0.219 Sum_probs=226.1
Q ss_pred cccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC
Q 045351 36 SLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 36 ~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~ 115 (349)
..+ +.+ |+++|+++..+++.+||.||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++|+++++++
T Consensus 5 ~~a--~~~-p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 5 IHA--QTT-PDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVN 80 (511)
T ss_pred hhH--hhC-CCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccc
Confidence 455 678 999999986558899999999999999999998 9999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Cc-ceEEeCCC-CccccccccCCCCCCCCccccccccCCCCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KY-GTVLLDSP-EFEPLSATDSLDYYDDDEERVRVSVSLSDP 188 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
+..+.+++.++++.+++++++++.......... .. ..+..+.. ........ .+.. .. .........++.
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~~~~ 156 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGY-AEAV--AG-LPATPIADESLG 156 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccH-HHHh--cC-CCCCCCCCcccc
Confidence 999999999999999999999987654433211 11 12222211 11000000 0000 00 000111233467
Q ss_pred EEEEeccCCCCCCceeee--chhhHHHH---HhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCC
Q 045351 189 AAILYSSGTTGMVKGALL--TQRNLVAA---VAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFD 263 (349)
Q Consensus 189 ~~i~~TSGtTG~pK~v~~--t~~~l~~~---~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~ 263 (349)
++++|||||||.||||.+ +|.++... .......+. +.+++++++..|++|.+++...+.++..|+++++.+.++
T Consensus 157 a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~ 235 (511)
T PRK13391 157 TDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWG-FRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEHFD 235 (511)
T ss_pred cEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcC-CCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCCCC
Confidence 899999999999999995 46665432 223344455 578899999999999999988888999999999999899
Q ss_pred HHHHHHHHHhhcccEEEechHHHHHHHhcCC-CCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--ccccccccC
Q 045351 264 FGRMLKAVEEFRVSHVVLAPPVVLKMARDGG-TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV--NRQLCLEFG 338 (349)
Q Consensus 264 ~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~--~~~~~~~~G 338 (349)
+..+++.++++++|++.++|.++..+.+... .....+++++|.+++||+++++++.+++.+.++.. ..|+.+|.|
T Consensus 236 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~ 313 (511)
T PRK13391 236 AEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGL 313 (511)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeecccccc
Confidence 9999999999999999999999999887540 23345688999999999999999999999988532 224455654
No 110
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.2e-34 Score=272.50 Aligned_cols=305 Identities=20% Similarity=0.308 Sum_probs=234.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.|...+ +.+ |+++|+++. ++.+||+||.++++++|..|.++.|+++|++|+++++|+.++++++|||+++
T Consensus 23 ~~l~~~l~~~a--~~~-p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 97 (560)
T PRK08974 23 QSLVDMFEQAV--ARY-ADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRA 97 (560)
T ss_pred ccHHHHHHHHH--HhC-CCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 57999999999 889 999999986 7899999999999999999983379999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeC-CC-Cccc----cc-------ccc-CC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLD-SP-EFEP----LS-------ATD-SL 169 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~-~~-~~~~----~~-------~~~-~~ 169 (349)
|++++|+++..+.+++.++++.+++++++++++..+.+.. .....+... .. .... .. ... ..
T Consensus 98 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 98 GMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred CcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccc
Confidence 9999999999999999999999999999997754433221 111111110 00 0000 00 000 00
Q ss_pred -CCCC-----------CCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEec
Q 045351 170 -DYYD-----------DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTV 235 (349)
Q Consensus 170 -~~~~-----------~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~ 235 (349)
.... ...........++++++++|||||||.||+|.++|+++..++......+. ....++.++..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08974 178 YHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTAL 257 (560)
T ss_pred ccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeC
Confidence 0000 00001112245789999999999999999999999999887654333221 024567889999
Q ss_pred ChhhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCC
Q 045351 236 PYFHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAH 313 (349)
Q Consensus 236 p~~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~ 313 (349)
|++|.+++ ...+..+..|+++++. +..++..+++.++++++|.+.++|.+++.|.... .....+++++|.+++||++
T Consensus 258 p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~~~~~~lr~~~~gg~~ 336 (560)
T PRK08974 258 PLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNE-EFQELDFSSLKLSVGGGMA 336 (560)
T ss_pred cHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCc-CcccCCccceeEEEecCcc
Confidence 99999998 5677788999997776 4568899999999999999999999999998876 5556678899999999999
Q ss_pred CCHHHHHHHHHHcC--CcccccccccC
Q 045351 314 LTLSVIRKYLQLNR--TVNRQLCLEFG 338 (349)
Q Consensus 314 l~~~~~~~~~~~~~--~~~~~~~~~~G 338 (349)
+++.+.++|.+.++ ..+.|+.+|.|
T Consensus 337 ~~~~~~~~~~~~~g~~~~~~YG~tE~~ 363 (560)
T PRK08974 337 VQQAVAERWVKLTGQYLLEGYGLTECS 363 (560)
T ss_pred CCHHHHHHHHHHhCCcEEeeecccccC
Confidence 99999999998774 23445566654
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-33 Score=268.57 Aligned_cols=284 Identities=24% Similarity=0.245 Sum_probs=219.4
Q ss_pred EEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHh
Q 045351 49 ALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIH 128 (349)
Q Consensus 49 ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~ 128 (349)
|++....++.+||.||.+.+.++|+.|.+ .|+++||+|+++++|+.++++++|||+++|++++|+++..+.+++.++++
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~ 80 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVD 80 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHh
Confidence 44444458999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEcCccccccccc------CcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCc
Q 045351 129 LSKPVIAFATHDTAHKIPQL------KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVK 202 (349)
Q Consensus 129 ~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 202 (349)
.++++++++++.....+.+. ....+.+........... +.... .. ........++.++++|||||||.||
T Consensus 81 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~--~~~~~~~~~~~a~i~~TSGtTG~PK 156 (502)
T PRK08276 81 DSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSY-EEALA-AQ--PDTPIADETAGADMLYSSGTTGRPK 156 (502)
T ss_pred cCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccH-HHHHh-cC--CCCCCCCCCcceEEEECCCCCCCCc
Confidence 99999999987655443221 122222221111000000 00000 00 0111234567899999999999999
Q ss_pred eeeechhhHHHHH------hhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcc
Q 045351 203 GALLTQRNLVAAV------AGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRV 276 (349)
Q Consensus 203 ~v~~t~~~l~~~~------~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~ 276 (349)
+|.++|.++.... ........ ...++++++..|++|.+++...+.++..|+++++.+.+++..+++.++++++
T Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 235 (502)
T PRK08276 157 GIKRPLPGLDPDEAPGMMLALLGFGMY-GGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRV 235 (502)
T ss_pred eEEEccCCcchhhhhHHhhhhhhhccc-CCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCC
Confidence 9999988765432 11222222 2467899999999999999777789999999999999999999999999999
Q ss_pred cEEEechHHHHHHHhcCCC--CCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccCc
Q 045351 277 SHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFGA 339 (349)
Q Consensus 277 t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G~ 339 (349)
|++.++|.++..+.+.+ . ...++++++|.+++||++++.++++++.+.++. .+.|+.+|.|.
T Consensus 236 t~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~ 301 (502)
T PRK08276 236 THSQLVPTMFVRMLKLP-EEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGG 301 (502)
T ss_pred eEEEehHHHHHHHHhCc-cccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccc
Confidence 99999999999998875 3 345678999999999999999999999998753 23355667654
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-33 Score=271.23 Aligned_cols=293 Identities=17% Similarity=0.158 Sum_probs=229.4
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
++.+.+...+ ... |+.+++.+.+.++.+||.||+++++++|++|.+ .|+++||+|+++++|+++++++++||+++|
T Consensus 3 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~g 78 (545)
T PRK07768 3 RFTEKMYANA--RTS-PRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMRG 78 (545)
T ss_pred hHHHHHHHHh--hCC-CcceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5788888999 888 999999888777899999999999999999998 999999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHH-------HHHHhhcCCeEEEEcCccccccccc---CcceEEeCCCCccccccccCCCCCCCCccc
Q 045351 109 VVVSPCNPSCTIPEI-------LRQIHLSKPVIAFATHDTAHKIPQL---KYGTVLLDSPEFEPLSATDSLDYYDDDEER 178 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l-------~~~l~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
++++++++..+.+++ .++++.++++.+++++.....+... ...++. +.++... ...
T Consensus 79 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~-------~~~-- 144 (545)
T PRK07768 79 ASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVLT-----VADLLAA-------DPI-- 144 (545)
T ss_pred ccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCceee-----hhhhccc-------CCC--
Confidence 999999988776544 4567778999999987554332221 111111 1122111 010
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCC-cEEEEecChhhHhhH-HHHHhhhhcCCEE
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRP-AVVLCTVPYFHSYGF-TCCLRSLGMGESL 256 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~l~~~p~~~~~g~-~~~~~~l~~G~~~ 256 (349)
......++++++++|||||||.||+|+++|+++...+......++ +..+ +++++.+|++|..|+ ..++.++..|+++
T Consensus 145 ~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~ 223 (545)
T PRK07768 145 DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAE-FDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAEL 223 (545)
T ss_pred CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcC-CCCCCceeEEeCCCccchHHHHHHHHHHHCCceE
Confidence 112446789999999999999999999999999998887777666 5655 899999999999999 4566789999999
Q ss_pred EEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcC---CCCCCCCCcchheehccCCCCCHHHHHHHHHH---c
Q 045351 257 VCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG---GTMDGYDLSSIEVVASGGAHLTLSVIRKYLQL---N 326 (349)
Q Consensus 257 v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~---~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~---~ 326 (349)
++... .++..+++.+++++++.+..+|..+..+.... ......+++++|.+++||+++++++.+++.+. +
T Consensus 224 v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~ 303 (545)
T PRK07768 224 VKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARF 303 (545)
T ss_pred EEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhc
Confidence 98853 27888999999999999887777766655421 02234678899999999999999999999874 3
Q ss_pred C-----CcccccccccCce
Q 045351 327 R-----TVNRQLCLEFGAP 340 (349)
Q Consensus 327 ~-----~~~~~~~~~~G~~ 340 (349)
+ ....|+.+|.|..
T Consensus 304 g~~~~~~~~~yG~tE~~~~ 322 (545)
T PRK07768 304 GLRPEAILPAYGMAEATLA 322 (545)
T ss_pred CCCcccccccccccccceE
Confidence 2 2334556666543
No 113
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.2e-34 Score=267.07 Aligned_cols=250 Identities=16% Similarity=0.141 Sum_probs=199.7
Q ss_pred eeeHHHHHHHHHHHHHHHhhhcCC-CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 58 RILYPDLTLRIKTLAYSLKTKYKL-SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a~~L~~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
-+.|+||.++++++|+.|.+ .|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred ecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 36899999999999999999 988 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHh
Q 045351 137 ATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVA 216 (349)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~ 216 (349)
++++..... .. .. .. ......+++.++++|||||||.||||++||+++...+.
T Consensus 98 ~~~~~~~~~---------~~---------~~------~~---~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~ 150 (452)
T PRK07445 98 GLDQLKLSH---------PP---------PL------PS---QGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQ 150 (452)
T ss_pred ecCcccccc---------CC---------CC------Cc---cccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHH
Confidence 876532110 00 00 00 01123568999999999999999999999999998887
Q ss_pred hhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCC
Q 045351 217 GGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTM 296 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 296 (349)
.....+. +.+ +++++.+|++|.+|+..++.+++.|+++++.+..+.........+++++++.++|.+++.+.+..
T Consensus 151 ~~~~~~~-~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~--- 225 (452)
T PRK07445 151 GFQRYFQ-LQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR--- 225 (452)
T ss_pred HHHHHhc-CCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---
Confidence 7766665 443 46788999999999988889999999999986432232233445788999999999999998642
Q ss_pred CCCCCcchheehccCCCCCHHHHHHHHHH-cCCcccccccccCcee
Q 045351 297 DGYDLSSIEVVASGGAHLTLSVIRKYLQL-NRTVNRQLCLEFGAPI 341 (349)
Q Consensus 297 ~~~~l~~lr~i~~gG~~l~~~~~~~~~~~-~~~~~~~~~~~~G~~~ 341 (349)
...+++||.+++||+++++++.+++.+. .+..+.|+.||.|..+
T Consensus 226 -~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~ 270 (452)
T PRK07445 226 -PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQI 270 (452)
T ss_pred -hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccc
Confidence 2347899999999999999999887653 1233445667765433
No 114
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.8e-33 Score=264.58 Aligned_cols=288 Identities=22% Similarity=0.240 Sum_probs=220.2
Q ss_pred eEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHH
Q 045351 48 TALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQI 127 (349)
Q Consensus 48 ~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l 127 (349)
.|++++ ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++++++..+.+++.+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 456665 7899999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEcCcccccccc-c--CcceEEeCCC-Cccccc---cc----cCC--CCCC-CCccccccccCCCCcEEEEe
Q 045351 128 HLSKPVIAFATHDTAHKIPQ-L--KYGTVLLDSP-EFEPLS---AT----DSL--DYYD-DDEERVRVSVSLSDPAAILY 193 (349)
Q Consensus 128 ~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~---~~----~~~--~~~~-~~~~~~~~~~~~~~~~~i~~ 193 (349)
+.+++++++++....+.+.+ . ...++..... +..... .. ... .+.+ ............+++++++|
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 159 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIY 159 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEE
Confidence 99999999998765544322 1 1112211110 000000 00 000 0000 00000112335689999999
Q ss_pred ccCCCCCCceeeechhhH---HHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHH
Q 045351 194 SSGTTGMVKGALLTQRNL---VAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKA 270 (349)
Q Consensus 194 TSGtTG~pK~v~~t~~~l---~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~ 270 (349)
||||||.||+|.++|... ..........++ +..++++++..|++|..+....+.++..|+++++.+.+++..+++.
T Consensus 160 TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (509)
T PRK12406 160 TSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYG-LKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQL 238 (509)
T ss_pred CCCCCCCCceEEEechhHHHHHHHHHhhhhhcC-CCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHH
Confidence 999999999999876654 333333444555 6888999999999999988767778999999999988999999999
Q ss_pred HHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccCc
Q 045351 271 VEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFGA 339 (349)
Q Consensus 271 i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G~ 339 (349)
++++++|.+.++|.++..|+... +.....+++++|.+++||+++++++++++.+.++. .+.|+.+|.|.
T Consensus 239 l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 310 (509)
T PRK12406 239 IERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGA 310 (509)
T ss_pred HHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCc
Confidence 99999999999999999998764 02345678999999999999999999999998753 23345566554
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3e-33 Score=260.85 Aligned_cols=257 Identities=22% Similarity=0.268 Sum_probs=211.1
Q ss_pred eHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 60 LYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 60 Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 9999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh
Q 045351 140 DTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH 219 (349)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 219 (349)
........ . ..+....... ............+++++++|||||||.||+|.++|+++...+....
T Consensus 80 ~~~~~~~~------~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~ 144 (436)
T TIGR01923 80 LLEEKDFQ------A---DSLDRIEAAG------RYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSK 144 (436)
T ss_pred ccccccee------e---cchHhhhhcc------cccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 64321100 0 0011111000 0111112244568899999999999999999999999999988888
Q ss_pred ccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCC
Q 045351 220 AVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGY 299 (349)
Q Consensus 220 ~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 299 (349)
..++ +.++++++...|++|.+++..++.++..|+++++.+.++ .+++.++++++|++.++|.++..|.+.. ...
T Consensus 145 ~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~-~~~-- 218 (436)
T TIGR01923 145 ENLG-FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEG-GHN-- 218 (436)
T ss_pred hhcC-CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCc-CCC--
Confidence 8887 789999999999999999988899999999999997653 9999999999999999999999998875 321
Q ss_pred CCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCce
Q 045351 300 DLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGAP 340 (349)
Q Consensus 300 ~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~~ 340 (349)
+++|.+++||+++++++.+.+.+.- +..+.|+.+|.|..
T Consensus 219 --~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 258 (436)
T TIGR01923 219 --ENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQ 258 (436)
T ss_pred --CceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchh
Confidence 6899999999999999998876531 23344556666543
No 116
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=249.78 Aligned_cols=321 Identities=16% Similarity=0.181 Sum_probs=245.9
Q ss_pred CCCCCCCCCC-cchhhhhhcccCCCCCCCCCeEEEeC----------CCC-----------ceeeHHHHHHHHHHHHHHH
Q 045351 18 RPSIAFPPET-TSVTSYVFSLLESHAPPPDTTALIDT----------ASR-----------HRILYPDLTLRIKTLAYSL 75 (349)
Q Consensus 18 ~~~~~~~~~~-~tl~~~l~~~~~~~~~~~~~~ai~~~----------~~~-----------~~~Ty~~l~~~~~~~a~~L 75 (349)
.+..+-+.+. .|+.+++...+ +++ +++.++-.. .+| +++||.|+..++.++|+.|
T Consensus 30 ~~L~~~~~~g~~Tl~~~~~~~~--~k~-g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL 106 (678)
T KOG1180|consen 30 DGLVSPPNPGASTLYELFEECV--KKF-GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGL 106 (678)
T ss_pred CCccCCCCCCcccHHHHHHHHH--Hhc-CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHH
Confidence 3344444333 89999999999 999 999988421 012 5899999999999999999
Q ss_pred hhhcCCCCCCE-EEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----C
Q 045351 76 KTKYKLSKYDV-AFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----K 149 (349)
Q Consensus 76 ~~~~g~~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~ 149 (349)
.+ .|++++++ ++|+++.+.+|..+++||++.+..+|-+...+..+.+.|.|.++++..+|++.++..++... .
T Consensus 107 ~~-lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~ 185 (678)
T KOG1180|consen 107 VK-LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKT 185 (678)
T ss_pred HH-hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCc
Confidence 99 99997766 99999999999999999999999999999999999999999999999999999877765431 2
Q ss_pred c-ceEEeCCCCc--------------------cccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeech
Q 045351 150 Y-GTVLLDSPEF--------------------EPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQ 208 (349)
Q Consensus 150 ~-~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~ 208 (349)
. .+|..+..+. +++...+ ......+.++.++|+|+|||||||||.||||+++|
T Consensus 186 vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG------~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H 259 (678)
T KOG1180|consen 186 VKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLG------KENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTH 259 (678)
T ss_pred eeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhC------CcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEec
Confidence 2 2555553211 1111111 11112334558899999999999999999999999
Q ss_pred hhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHH--------HHHHhhcccEEE
Q 045351 209 RNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRML--------KAVEEFRVSHVV 280 (349)
Q Consensus 209 ~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~--------~~i~~~~~t~l~ 280 (349)
.|+++.+.........+.+.|+++..+|+.|++.+..-+.+++-|+.+-+.+..+..... -.+...++|.|.
T Consensus 260 ~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~ 339 (678)
T KOG1180|consen 260 SNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMA 339 (678)
T ss_pred ccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhh
Confidence 999999998877776689999999999999999998888999999999988654322222 334567999999
Q ss_pred echHHHHHHHhcC--------C-----------------CCCCC----------------CCcchheehccCCCCCHHHH
Q 045351 281 LAPPVVLKMARDG--------G-----------------TMDGY----------------DLSSIEVVASGGAHLTLSVI 319 (349)
Q Consensus 281 ~~P~~l~~l~~~~--------~-----------------~~~~~----------------~l~~lr~i~~gG~~l~~~~~ 319 (349)
++|++|+++.+.- . +.... --.+||++++||+||+++.-
T Consensus 340 ~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQ 419 (678)
T KOG1180|consen 340 AVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQ 419 (678)
T ss_pred hhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHH
Confidence 9999997765431 0 00000 01478999999999999999
Q ss_pred HHHHHHcCCc--ccccccccCceeeecCCCC
Q 045351 320 RKYLQLNRTV--NRQLCLEFGAPIISLSKQQ 348 (349)
Q Consensus 320 ~~~~~~~~~~--~~~~~~~~G~~~i~~~~~~ 348 (349)
+.+...+.+. .=|+.||+++.-...++.|
T Consensus 420 rF~nic~C~Pv~qGYGLTEtca~~tv~e~~d 450 (678)
T KOG1180|consen 420 RFMNICFCCPVLQGYGLTETCAAATVLEPED 450 (678)
T ss_pred HHHHHhccccccccccccchhcccEecChhh
Confidence 9999988433 3345577776555455443
No 117
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1e-31 Score=272.92 Aligned_cols=251 Identities=14% Similarity=0.129 Sum_probs=201.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC---CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT---ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~---~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.|+.+.+...+ +++ |+++|+... .+.+++||+|+.++++++|+.|.+ +|+++||+|+|+++|+++|+++.+||
T Consensus 427 ~Tl~dll~~~a--~~~-pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~Ewvia~lA~ 502 (1452)
T PTZ00297 427 RSLGEMWERSV--TRH-STFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRNIVILEVAC 502 (1452)
T ss_pred CCHHHHHHHHH--HHC-CCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 68999999999 999 999999742 123789999999999999999999 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc---Cc-ceEEeCCC-C----------------cccc
Q 045351 105 FSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL---KY-GTVLLDSP-E----------------FEPL 163 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~---~~-~~~~~~~~-~----------------~~~~ 163 (349)
+++|++++|+++ +.+++.++++.++++++|++.+...++.+. .. .+++++.. + +.++
T Consensus 503 ~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~l 580 (1452)
T PTZ00297 503 ALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFV 580 (1452)
T ss_pred HHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHH
Confidence 999999999975 467999999999999999987765554331 22 24455421 0 1111
Q ss_pred ccccCCCCCCCCccccccccCCCCcEEEEe---ccCCCCCCceeeechhhHHHHHhhhhccc--cCCCCCcEEEEecChh
Q 045351 164 SATDSLDYYDDDEERVRVSVSLSDPAAILY---SSGTTGMVKGALLTQRNLVAAVAGGHAVR--AARSRPAVVLCTVPYF 238 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~l~~~p~~ 238 (349)
...... ..........++|++.|+| ||||||.||||++||+|++..+....... .....+|++++.+|++
T Consensus 581 l~~G~~-----~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLa 655 (1452)
T PTZ00297 581 EQKGRL-----CPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFA 655 (1452)
T ss_pred HhcCcc-----cCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHH
Confidence 111100 0111122346789999996 99999999999999999999988765432 1145789999999999
Q ss_pred hHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhc
Q 045351 239 HSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARD 292 (349)
Q Consensus 239 ~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 292 (349)
|+++....+.+++.|+++.+ +++..+++.|+++++|+++++|.+++++...
T Consensus 656 HI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~ 706 (1452)
T PTZ00297 656 MLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQ 706 (1452)
T ss_pred HHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHH
Confidence 99998777788999999974 4789999999999999999999999988654
No 118
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.6e-31 Score=243.50 Aligned_cols=314 Identities=19% Similarity=0.199 Sum_probs=243.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.++.+.+..+...... ++.+|+++.. +...+||.|+.+++.++|..|.+ .|+++||+|++++|+.++++++++|
T Consensus 63 ln~~~n~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~mPm~~e~~ia~lA 140 (626)
T KOG1175|consen 63 LNACYNCLDRHIKEKG-GDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYMPMIPEAVIAMLA 140 (626)
T ss_pred hhhhHhhhhhhhhhcC-CCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEeccCChHHHHHHHH
Confidence 5666666665422334 7888888652 22458999999999999999996 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcc-------------------eEEeCCCCccccc
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYG-------------------TVLLDSPEFEPLS 164 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~ 164 (349)
|.++|++..++....+.+++...++.++++++++.+......+..... .+.+.....+...
T Consensus 141 ~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 220 (626)
T KOG1175|consen 141 CARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFW 220 (626)
T ss_pred HhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccH
Confidence 999999999999999999999999999999999987654433321100 0000000000001
Q ss_pred cccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-
Q 045351 165 ATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF- 243 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~- 243 (349)
.... ............+.+|+.+|+|||||||.||++.+++..-..........+.+..+.|++.+...+-++.|.
T Consensus 221 ~~~~---~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~ 297 (626)
T KOG1175|consen 221 SLEL---KKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHS 297 (626)
T ss_pred HHHh---hhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccc
Confidence 0000 001222235577889999999999999999999999887766665555554448999999999999999999
Q ss_pred HHHHhhhhcCCEEEEcC--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehccCCCCCHHHHH
Q 045351 244 TCCLRSLGMGESLVCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVASGGAHLTLSVIR 320 (349)
Q Consensus 244 ~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~gG~~l~~~~~~ 320 (349)
+.++.+|+.|+++++.+ ++++..+++.+.+|++|.+++.|..++.|.+.. .....+++++||.+.++|++++++.++
T Consensus 298 ~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~e 377 (626)
T KOG1175|consen 298 YVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWE 377 (626)
T ss_pred hhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHH
Confidence 56778999999999994 569999999999999999999999999777664 133445557899999999999999999
Q ss_pred HHHHHcCC---cccccccccCceeeecCC
Q 045351 321 KYLQLNRT---VNRQLCLEFGAPIISLSK 346 (349)
Q Consensus 321 ~~~~~~~~---~~~~~~~~~G~~~i~~~~ 346 (349)
++.++++. ...++.+|+|..+|+..+
T Consensus 378 w~~~~~~~~pv~e~~~qtEtG~~~i~~~~ 406 (626)
T KOG1175|consen 378 WWKRVTGLDPIYETYGQTETGGICITPKP 406 (626)
T ss_pred HHHHhcCccchhhceeeeccCceeeeccC
Confidence 99999965 455677999988776554
No 119
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.98 E-value=3.3e-31 Score=251.09 Aligned_cols=247 Identities=19% Similarity=0.166 Sum_probs=183.1
Q ss_pred cCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc------ccccc----cCcceEEeCC-C-
Q 045351 91 SQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA------HKIPQ----LKYGTVLLDS-P- 158 (349)
Q Consensus 91 ~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~----~~~~~~~~~~-~- 158 (349)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... +.+.. .....+.+.. .
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 5899999999999999999999999999999999999999999999986431 11111 1112222211 0
Q ss_pred -----------CccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCC
Q 045351 159 -----------EFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSR 227 (349)
Q Consensus 159 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 227 (349)
.+.++.....................++++++|+|||||||.||||++||++++.........++ +..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMD-IQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcC-CCC
Confidence 01111100000000000000111235689999999999999999999999998876655555555 678
Q ss_pred CcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcch
Q 045351 228 PAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSI 304 (349)
Q Consensus 228 ~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~l 304 (349)
+|++++..|++|.+|+..++.+|+.|+++++.+ .+++..+++.|+++++|++.++|.++..|.+.. . ....++++|
T Consensus 160 ~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~-~~~~~~~~~~~L 238 (499)
T PLN03051 160 GDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTG-AFAMEGLDWSKL 238 (499)
T ss_pred CCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcC-ccccccCCchhh
Confidence 899999999999999987889999999999987 478999999999999999999999999998764 3 345678999
Q ss_pred heehccCCCCCHHHHHHHHHHcC----CcccccccccCc
Q 045351 305 EVVASGGAHLTLSVIRKYLQLNR----TVNRQLCLEFGA 339 (349)
Q Consensus 305 r~i~~gG~~l~~~~~~~~~~~~~----~~~~~~~~~~G~ 339 (349)
|.+++||++++++..+++.+.++ ..+.|++||.+.
T Consensus 239 r~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~ 277 (499)
T PLN03051 239 RVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELAS 277 (499)
T ss_pred eEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccc
Confidence 99999999999999987776332 234456666543
No 120
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=1.4e-28 Score=207.62 Aligned_cols=211 Identities=19% Similarity=0.100 Sum_probs=157.8
Q ss_pred hhcccCCCCCCCCCeEEEeC-C---CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 34 VFSLLESHAPPPDTTALIDT-A---SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 34 l~~~~~~~~~~~~~~ai~~~-~---~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
|...+ ..+ |+++|++.. + +++++||+|+.++++++|+.|++..|+++||+|+|+++|+++++++++|++++|+
T Consensus 2 ~~~~~--~~~-p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLL--AAD-PASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhh--hhC-CCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 45566 778 999999743 2 2457999999999999999999525999999999999999999999999999999
Q ss_pred eEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCC---------CccccccccCCCCCCCCccccc
Q 045351 110 VVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSP---------EFEPLSATDSLDYYDDDEERVR 180 (349)
Q Consensus 110 ~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++|++ .+++++++++.+..+.+... ...+.+... ...... ..............+
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 143 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAAGS-GEVVALSLDPLGRRVAGELPPGVI-DFAPEVRVHGDQFAP 143 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcccC-CceEEEeccccccCCCCCCCCccc-chhhhhhccCCCCCC
Confidence 999995 57899999988776664321 222222100 000100 000000001111111
Q ss_pred c-ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEE
Q 045351 181 V-SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVC 258 (349)
Q Consensus 181 ~-~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~ 258 (349)
. ...++|++.|+||||+ +|.+++... ...+ +.++|+++ .+|++|.+|+ ..++.+|+.|+++++
T Consensus 144 ~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~-l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~ 208 (227)
T TIGR03089 144 YEPPDATAPALVAGGGEW---------TGAELVAAA----RAAG-LPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVL 208 (227)
T ss_pred CCCCCCCcceeeeccccc---------cHHHHHHHH----hhcC-CCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEE
Confidence 1 3456899999999985 666666654 3334 68899999 9999999999 688899999999999
Q ss_pred cCCCCHHHHHHHHHhhccc
Q 045351 259 MGKFDFGRMLKAVEEFRVS 277 (349)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t 277 (349)
+++|++..+++.|+++|+|
T Consensus 209 ~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 209 VTHPDPARLDQIAETERVT 227 (227)
T ss_pred ecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999987
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=7.7e-27 Score=228.04 Aligned_cols=290 Identities=20% Similarity=0.246 Sum_probs=237.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.+.+...+ ... |++.|+++. +..+||+++..+++++|+.|.+ .|+.+++.|+++.+.+.++++.++|+++.
T Consensus 227 ~~i~~~f~~~a--~~~-p~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilka 300 (642)
T COG1020 227 LTIHLLFEEQA--ATT-PDAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLKA 300 (642)
T ss_pred chHHHHHHHHH--HhC-CCceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHhc
Confidence 67999999999 999 999999997 8999999999999999999998 99999999999998899999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|+.++|+++..+.+++.++++++++..+++............. +.++..... . ...........+++
T Consensus 301 G~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~-------~~~~~~~~~~~~~~ 367 (642)
T COG1020 301 GAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDALSE----I-------PDTDPIPQALLGDA 367 (642)
T ss_pred CCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccccccc----C-------CccCcccccCCCCC
Confidence 9999999999999999999999999999988433221111111 111110000 0 00011122445689
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---CCH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK---FDF 264 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~ 264 (349)
.+|++|||||||.||||..+|+++.+.+.+....+. ...+++++...++.++.+...++.++..|+++++... .++
T Consensus 368 ~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~-~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~ 446 (642)
T COG1020 368 LAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFG-LDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDP 446 (642)
T ss_pred eEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcC-CCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCH
Confidence 999999999999999999999999998877777777 7888999999999999999999999999999999963 589
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCC--CCCCcchheehccCCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMD--GYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
..+.+.+.++++|++..+|.++..++... ... ....+.+|.+.+||+.++.++..++.+..+. .....+.||.
T Consensus 447 ~~l~~~~~~~~vt~~~~~p~~~~~~~~~~-~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~-~~~l~~~ygp 521 (642)
T COG1020 447 AALLELLEAQGITVLLLVPLLLRLLLLAA-LAPDLISPCERLRQLLSGGEALPLALVQRLLQLAAL-ARRLLNLYGP 521 (642)
T ss_pred HHHHHHHHHcCCEEEEecHHHHHHHHhch-hhccccCCcccccEEEEcCCCCCHHHHHHHHHhccc-cceEeeccCc
Confidence 99999999999999999999999998763 222 2223459999999999999999999887643 2334555553
No 122
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.85 E-value=7.9e-20 Score=173.95 Aligned_cols=307 Identities=14% Similarity=0.190 Sum_probs=225.6
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC----CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT----ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~----~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
.++.++|..++ ++. ||.+|+..- ..+.++||.+|..++.+++..|..+.-+++||.|+++++++.|++++++|
T Consensus 770 ~~ile~Lq~R~--a~t-p~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRA--AKT-PDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHh--hcC-CCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 57999999999 999 999999863 23489999999999999999999977899999999999999999999999
Q ss_pred HHhcCCeEecCCCCC------CHHHHHHHHhhcCCeEEEEcCcccccccccCc------ceE--EeCCCCccccccccCC
Q 045351 104 LFSLGVVVSPCNPSC------TIPEILRQIHLSKPVIAFATHDTAHKIPQLKY------GTV--LLDSPEFEPLSATDSL 169 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~------~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~ 169 (349)
|+.+|.+++|+.|.. ..+.+..+++.+++..|+++.+....+++... ..+ .++.+.+..-......
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~ 926 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKK 926 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhh
Confidence 999999999998764 34578889999999999999876655543111 000 0111111100110000
Q ss_pred CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHh
Q 045351 170 DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLR 248 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~ 248 (349)
...+......+.....+.+|++-+.--++|.--++.++|.++++.++...+... +.+..-++.+.+.+...|+ .+++.
T Consensus 927 ~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~-l~~~rpl~~~~~~~sGlgf~~wcLl 1005 (1363)
T KOG3628|consen 927 NIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQ-LYKSRPLLGCSSPYSGLGFNHWCLL 1005 (1363)
T ss_pred hhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHc-cccCCceEEEecCccchhHHHHHHH
Confidence 000012222223445688999999999999999999999999999999888887 5666667777777666667 89999
Q ss_pred hhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchh------eehccCCCCCHHH
Q 045351 249 SLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIE------VVASGGAHLTLSV 318 (349)
Q Consensus 249 ~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr------~i~~gG~~l~~~~ 318 (349)
..++|.+.++.++ -++..++..|++|++.-.+.+-..++...+.. ..+..+++... +++..-+.--..+
T Consensus 1006 gVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l-~t~~enl~~~gnn~s~s~vv~~~~RPr~al 1084 (1363)
T KOG3628|consen 1006 GVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGL-ETSVENLSKRGNNTSSSIVVPAEERPRIAL 1084 (1363)
T ss_pred HHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhcc-ccccchhhhhhcccccceeeecCCccHHHH
Confidence 9999999888854 38999999999999999998888888888876 55544443322 2233344445566
Q ss_pred HHHHHHHcC---CcccccccccCc
Q 045351 319 IRKYLQLNR---TVNRQLCLEFGA 339 (349)
Q Consensus 319 ~~~~~~~~~---~~~~~~~~~~G~ 339 (349)
..-|.+.|- .......+.|+.
T Consensus 1085 i~sf~klfa~igLsp~avStsys~ 1108 (1363)
T KOG3628|consen 1085 IASFKKLFAAIGLSPRAVSTSYSS 1108 (1363)
T ss_pred HHHHHHHHHHcCCChhhhcccccc
Confidence 777777662 222234566654
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.83 E-value=7.5e-20 Score=166.49 Aligned_cols=145 Identities=20% Similarity=0.191 Sum_probs=120.0
Q ss_pred CCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCC--CCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCC
Q 045351 186 SDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARS--RPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKF 262 (349)
Q Consensus 186 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~ 262 (349)
+..++++|||||||.||+|++||+++...+......++ +. +.+++++.+|++|.+|+ ..++.++..|+++++..++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILG-ERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhC-cCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 56899999999999999999999999988877766665 33 34689999999999998 6778899999999999889
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
++..+++.++.+ |+++++|.+++.|.+.. .++++++. ++||+++++++++++.+..+ ..+.|++||.|+
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~-----~~l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~ 244 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD-----YRLPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGG 244 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC-----cCCCccee-EecCCCCCHHHHHHHHHhcccchhheeccccccc
Confidence 999999888754 89999999999997653 34667776 57899999999999988632 234567788765
No 124
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.79 E-value=3.8e-18 Score=155.15 Aligned_cols=152 Identities=26% Similarity=0.278 Sum_probs=122.8
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc--
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-- 259 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-- 259 (349)
...++++++++|||||||.||+|+++|+++...+......+ ...++++..+|++|.+|+..++.++..|+++++.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 34568999999999999999999999999998877665543 3557899999999999998888999999999883
Q ss_pred -CCCCHHHHHHHHHhhc--ccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCccccccc
Q 045351 260 -GKFDFGRMLKAVEEFR--VSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCL 335 (349)
Q Consensus 260 -~~~~~~~~~~~i~~~~--~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~ 335 (349)
..+++..+++.+++++ .++...+|..+..++... ....+++++|.+++||+++++++.+++.+.- +..+.|+.+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~--~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~T 185 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDP--AATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMS 185 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCc--cccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCC
Confidence 4689999999999998 566777898888877663 2335688999999999999999999887631 223344556
Q ss_pred ccC
Q 045351 336 EFG 338 (349)
Q Consensus 336 ~~G 338 (349)
|.|
T Consensus 186 E~~ 188 (358)
T PRK07824 186 ETS 188 (358)
T ss_pred ccC
Confidence 654
No 125
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.68 E-value=3e-16 Score=145.78 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=117.8
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhh---hccccCCCCCcEEEEecChhhH-hhHHHHHhhhhcCCEEEEc
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGG---HAVRAARSRPAVVLCTVPYFHS-YGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~-~g~~~~~~~l~~G~~~v~~ 259 (349)
..++++.+++||||||.||+|.+||+++....... ...++ +.++|++++..+..+. .++...+.++..|++++.+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAG-GRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcC-CCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 45678899999999999999999999987654332 22234 6788988887665432 3334456688899999988
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCC--CCcchheehccCCCCCHHHHHHHHHHcCC--ccccccc
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGY--DLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCL 335 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~ 335 (349)
+..++..+++.|+++++|++.++|+++..|++.. ...+. ...++|.+++||+++++++.+.+.+.|+. .+.|+++
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~-~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEEL-KRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHH-HHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccch
Confidence 7778899999999999999999999999988754 32222 23589999999999999999999998853 2345556
Q ss_pred ccC
Q 045351 336 EFG 338 (349)
Q Consensus 336 ~~G 338 (349)
|.|
T Consensus 231 E~~ 233 (422)
T TIGR02155 231 EVI 233 (422)
T ss_pred hhc
Confidence 653
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.58 E-value=1.6e-14 Score=134.73 Aligned_cols=152 Identities=21% Similarity=0.165 Sum_probs=114.6
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEE
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVC 258 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~ 258 (349)
...++++.+.+||||||.||+|.+||.++.......... .+ +.++|+++...|..+..|. ...+.++..|++++.
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G-~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQG-FTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcC-CCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 345688899999999999999999999988766544333 24 6788999999988776555 444567888988765
Q ss_pred cCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCC--CCcchheehccCCCCCHHHHHHHHHHcCC--cccccc
Q 045351 259 MGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGY--DLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLC 334 (349)
Q Consensus 259 ~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~ 334 (349)
... ....++.|+++++|.+..+|+.+..|++.. ...+. ...++|.+++||++++++..+.+.+.|+. .+.|++
T Consensus 162 ~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~-~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~ 238 (445)
T TIGR03335 162 EGK--CTFPIRIIESYRPTGIVASVFKLLRLARRM-KAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGS 238 (445)
T ss_pred CCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHH-HHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCCh
Confidence 443 346689999999999999999888877643 22222 24689999999999999999999988853 233455
Q ss_pred cccC
Q 045351 335 LEFG 338 (349)
Q Consensus 335 ~~~G 338 (349)
+|.|
T Consensus 239 TE~~ 242 (445)
T TIGR03335 239 TEGT 242 (445)
T ss_pred hhhh
Confidence 5543
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.57 E-value=6.2e-15 Score=144.43 Aligned_cols=288 Identities=15% Similarity=0.108 Sum_probs=191.5
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeC----CC--CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHH
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDT----AS--RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYL 102 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~----~~--~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~l 102 (349)
++.+.+...+ ... |++.+..+- .. -..+||......++.+++.|.. .|...|+.|++++..+.++++..+
T Consensus 37 ~~~~~~~~~~--~~~-~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v~ 112 (1032)
T KOG1178|consen 37 TLEDSFRREL--AEA-PENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSVF 112 (1032)
T ss_pred chhhHHHHHH--hhc-ccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeeee
Confidence 5666777777 777 777776542 11 2689999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEE-eCCCCc---cccccccCCCCCCCCccc
Q 045351 103 SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVL-LDSPEF---EPLSATDSLDYYDDDEER 178 (349)
Q Consensus 103 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~ 178 (349)
+.+++|..+++++|.++..+....+...-....-+.-+....+.-....... .....+ .+....... .....
T Consensus 113 ~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~~~~f~~~~~----~~~~r 188 (1032)
T KOG1178|consen 113 AVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETIADSFQMVLH----NEDTR 188 (1032)
T ss_pred ehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhccchhhhhhc----cCCCc
Confidence 9999999999999999921111111111010011101111111000000000 000000 011111000 12222
Q ss_pred cccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEE
Q 045351 179 VRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLV 257 (349)
Q Consensus 179 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v 257 (349)
...-..+|..+++.||||+||.||+|.-+|..+.+...+....+. ....+++-.....+.+... ......|+.|+.+.
T Consensus 189 ~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~-~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~ 267 (1032)
T KOG1178|consen 189 EIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFP-PTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLL 267 (1032)
T ss_pred ceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCC-cCccchhhhhheeecccchHHHHhhHhhcCceee
Confidence 223456778999999999999999999999999999999888877 5666665222223333334 44445666666666
Q ss_pred EcCCC---CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCC-------------CCCCcchheehccCCCCCHHHHHH
Q 045351 258 CMGKF---DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMD-------------GYDLSSIEVVASGGAHLTLSVIRK 321 (349)
Q Consensus 258 ~~~~~---~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~-------------~~~l~~lr~i~~gG~~l~~~~~~~ 321 (349)
.+... ++.++.+.+++|+++..+.+|++.++++... ... -...+.|+....+|++...++...
T Consensus 268 ~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~-~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s 346 (1032)
T KOG1178|consen 268 VPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAIL-TTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTS 346 (1032)
T ss_pred cccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhc-CcchhhhhhhhhcccccccchhheeeeecCCccchhhhhh
Confidence 66332 4799999999999999999999998888765 221 111247999999999999999997
Q ss_pred HHHHc
Q 045351 322 YLQLN 326 (349)
Q Consensus 322 ~~~~~ 326 (349)
+.+.+
T Consensus 347 ~~~~~ 351 (1032)
T KOG1178|consen 347 TFDLL 351 (1032)
T ss_pred hhhcc
Confidence 77766
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.17 E-value=3.1e-10 Score=102.09 Aligned_cols=157 Identities=16% Similarity=0.084 Sum_probs=119.2
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecCh-hhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPY-FHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~-~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
...++...|--||||||.|+.+.+|+..+......+...+. ....+|++..+.-. .+..|+..-.++-..|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 34456677999999999999999999988776665544432 25677877666553 2334444445566678777777
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCC--CCCcchheehccCCCCCHHHHHHHHHHcCCcc--ccccc
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDG--YDLSSIEVVASGGAHLTLSVIRKYLQLNRTVN--RQLCL 335 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~--~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~--~~~~~ 335 (349)
..-+.++-++.|+.+++|++.++|+.+..|++.. ...+ ..-.+||.+++|||+++++..+.+.++|+... +|+.+
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~-~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGlt 245 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEA-EEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLT 245 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHH-HHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccc
Confidence 6668899999999999999999999999999886 4443 33468999999999999999999999997554 56666
Q ss_pred ccCce
Q 045351 336 EFGAP 340 (349)
Q Consensus 336 ~~G~~ 340 (349)
|-+++
T Consensus 246 E~~g~ 250 (438)
T COG1541 246 EGFGP 250 (438)
T ss_pred cccCC
Confidence 65444
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.09 E-value=4.5e-10 Score=108.52 Aligned_cols=281 Identities=14% Similarity=0.121 Sum_probs=197.2
Q ss_pred hhhhhhcccCCCCCCCCCeEEEeCC-CC--ceeeHHHHHHHHHHHHH-HHhhhcCCCCCCEEEEEcCC--CchHHHHHHH
Q 045351 30 VTSYVFSLLESHAPPPDTTALIDTA-SR--HRILYPDLTLRIKTLAY-SLKTKYKLSKYDVAFLLSQN--SVRVPVLYLS 103 (349)
Q Consensus 30 l~~~l~~~~~~~~~~~~~~ai~~~~-~~--~~~Ty~~l~~~~~~~a~-~L~~~~g~~~gd~V~i~~~n--~~~~~~~~lA 103 (349)
+...++.+- ... +..+|.+.-+ .| ..+||..+..++.+.|+ .|.+ -|+.++|+|.++... ..++++..++
T Consensus 96 ~~avl~~~~--nhs-~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~k-sgl~~~~~vvL~Y~~~e~ie~~isl~g 171 (1363)
T KOG3628|consen 96 IIAVLRYRR--NHS-ATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNK-SGLKPGDRVVLYYRKCEAIEFLISLFG 171 (1363)
T ss_pred hHHHHHhhc--cCC-CCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhc-cCCCCCcEEEEEEEhhhhhHHhhhhcc
Confidence 444444444 445 5566665432 23 68999999999999999 5665 999999999999874 4899999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcc------eEEeCCCCccccccccCCCCCCCCcc
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYG------TVLLDSPEFEPLSATDSLDYYDDDEE 177 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
|...|..++|+++..+.+++..+++.....+++........+.....+ +......++... +..+.
T Consensus 172 c~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k~~-------~~~~k-- 242 (1363)
T KOG3628|consen 172 CFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFKGN-------YTKDK-- 242 (1363)
T ss_pred ccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhcccccce-------eehhh--
Confidence 999999999999999999999999999999999877655444331100 111111111100 00011
Q ss_pred ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh--------------------ccccCCCCCcEEEEecCh
Q 045351 178 RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH--------------------AVRAARSRPAVVLCTVPY 237 (349)
Q Consensus 178 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--------------------~~~~~~~~~~~~l~~~p~ 237 (349)
......... ..+|-||++++|.--|++++|+ +..+.+... ..+ +....+.++.....
T Consensus 243 ~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~ 319 (1363)
T KOG3628|consen 243 IKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF-PVPSEDVLLTNLDP 319 (1363)
T ss_pred ccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc-ccCcccceeeccCc
Confidence 111112222 7899999999999999999998 544333211 111 24566777888888
Q ss_pred hhHhhH-HHHHhhhhcCCEEEEcCC---CCHHHHHHHHHhhcccEEEechHHHHHHHhc----C------CCCCCCCCcc
Q 045351 238 FHSYGF-TCCLRSLGMGESLVCMGK---FDFGRMLKAVEEFRVSHVVLAPPVVLKMARD----G------GTMDGYDLSS 303 (349)
Q Consensus 238 ~~~~g~-~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~----~------~~~~~~~l~~ 303 (349)
.-..|+ .+++.++++|.+.+.++. +.|..+...+.+++++++..--..+.+.... + .+....++++
T Consensus 320 s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~ss 399 (1363)
T KOG3628|consen 320 SQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSS 399 (1363)
T ss_pred ccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccc
Confidence 888888 889999999999999976 6888999999999999888765555444321 1 1233467899
Q ss_pred hheehccCCCCCHHHHHHHHHHc
Q 045351 304 IEVVASGGAHLTLSVIRKYLQLN 326 (349)
Q Consensus 304 lr~i~~gG~~l~~~~~~~~~~~~ 326 (349)
+|.+.+....+..+...-...++
T Consensus 400 lk~C~Vtc~~vd~~~~~ivs~~w 422 (1363)
T KOG3628|consen 400 LKGCMVTCTAVDTEFQEIVSDRW 422 (1363)
T ss_pred eeeeEEeeeecchHHHHHHHHhh
Confidence 99999999999988665444443
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=98.48 E-value=2.2e-06 Score=78.99 Aligned_cols=140 Identities=15% Similarity=0.025 Sum_probs=91.1
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccc--cCCCCCcEEEEe--cChhhHhhHHHHHhhhhcCCE-EEEcC-C
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR--AARSRPAVVLCT--VPYFHSYGFTCCLRSLGMGES-LVCMG-K 261 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~l~~--~p~~~~~g~~~~~~~l~~G~~-~v~~~-~ 261 (349)
-..+..||||||.|=.+..+..............+ ..+..++++... .+. +.+ .++..... +-..+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly------~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY------QSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH------HHHHhccceeeecCCC
Confidence 45677899999999999999886654433221111 113333443333 221 111 11111111 22221 1
Q ss_pred CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc--ccccccc
Q 045351 262 FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV--NRQLCLE 336 (349)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~--~~~~~~~ 336 (349)
-+.+..++.|++++++++.+.|+.+..|++.. ...+.+ .+++.++++||.++++..+.+.+.|+.. +.|+++|
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~-~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE 248 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEV-MEGELT-IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE 248 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHH-HhcCCC-CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch
Confidence 36789999999999999999999999999864 333323 4789999999999999999999999643 3345566
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=96.96 E-value=0.017 Score=52.36 Aligned_cols=158 Identities=14% Similarity=0.122 Sum_probs=87.5
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh---ccccCCCC-CcEEEEecChhhH---hhH--HHHHhhhhcC
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH---AVRAARSR-PAVVLCTVPYFHS---YGF--TCCLRSLGMG 253 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~---~~~~~~~~-~~~~l~~~p~~~~---~g~--~~~~~~l~~G 253 (349)
...+++..++-||||||.|.-+.+.+..+..+...+. ..+..... .-.++...|-... .+. ...+..+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 4456788899999999999777777666655543322 22221122 2234444443211 111 2333444555
Q ss_pred CEEEEc-CCCCHHHHHHHHH----hhcccEEEechHHHHHHHhcCCCCC--CCCCc-chheehccC------CCCCH-HH
Q 045351 254 ESLVCM-GKFDFGRMLKAVE----EFRVSHVVLAPPVVLKMARDGGTMD--GYDLS-SIEVVASGG------AHLTL-SV 318 (349)
Q Consensus 254 ~~~v~~-~~~~~~~~~~~i~----~~~~t~l~~~P~~l~~l~~~~~~~~--~~~l~-~lr~i~~gG------~~l~~-~~ 318 (349)
..-.+- ..+|.+.+...+. +.++..+++.|.++..++... +.. ...++ ..+.+-.|| +.+++ +.
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l-~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDEL-EERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHH-HhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 553332 2467777777665 446788999998877766544 322 23343 344554444 34655 44
Q ss_pred HHHHHHHcCC-cccccccccCcee
Q 045351 319 IRKYLQLNRT-VNRQLCLEFGAPI 341 (349)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~~~G~~~ 341 (349)
.+.+.+.|+. ..-.+.++||+..
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtE 268 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTE 268 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccc
Confidence 4555566765 2334667777654
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.93 E-value=0.054 Score=49.68 Aligned_cols=82 Identities=20% Similarity=0.047 Sum_probs=68.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
-.+|+.|....+..+|+.|.. .|..+||+|.+...-+ ...+-+.+|+.++|++++|+++.. -+.-..++++.++.+
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tv 185 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTV 185 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcE
Confidence 369999999999999999999 9999999998887622 122778899999999999998843 445577889999999
Q ss_pred EEEcCc
Q 045351 135 AFATHD 140 (349)
Q Consensus 135 i~~~~~ 140 (349)
|.+...
T Consensus 186 I~~tps 191 (438)
T COG1541 186 IAATPS 191 (438)
T ss_pred EEEChH
Confidence 999865
No 133
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=91.33 E-value=1.9 Score=40.54 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=61.0
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
-.+|..++...+...++.+.. .|+.+||++.+..+.+.. .....+++..+|+.++|... .+....++++.++.+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~ 179 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTG 179 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCE
Confidence 357899999888888888887 899999999998876543 33456788999999887653 234467788889998
Q ss_pred EEEcC
Q 045351 135 AFATH 139 (349)
Q Consensus 135 i~~~~ 139 (349)
++...
T Consensus 180 l~~~p 184 (445)
T TIGR03335 180 IVASV 184 (445)
T ss_pred EEECH
Confidence 87654
No 134
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=89.73 E-value=2.7 Score=39.10 Aligned_cols=82 Identities=16% Similarity=0.022 Sum_probs=62.8
Q ss_pred eeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 58 RILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
.+|..++......+++.+.. .|+.+||++....+.+. ......++.+++|+.+++++... .+.+...+++.++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 46777877777777788887 89999999887665443 23334677889999999887654 5778889999999999
Q ss_pred EEcCcc
Q 045351 136 FATHDT 141 (349)
Q Consensus 136 ~~~~~~ 141 (349)
+.....
T Consensus 172 ~~~Ps~ 177 (422)
T TIGR02155 172 MVTPSY 177 (422)
T ss_pred EEcHHH
Confidence 887653
No 135
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=82.58 E-value=11 Score=31.75 Aligned_cols=54 Identities=7% Similarity=-0.037 Sum_probs=43.5
Q ss_pred hhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCC
Q 045351 76 KTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKP 132 (349)
Q Consensus 76 ~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 132 (349)
.. .|+.++|++. ..|-.. .....+++++..|++.+.. ++.+++++-..+++.++
T Consensus 171 ~~-~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RA-AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hh-cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 55 7899999999 888554 3345689999999998887 58889998888887765
No 136
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.62 E-value=27 Score=33.15 Aligned_cols=93 Identities=15% Similarity=-0.004 Sum_probs=65.9
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.++++... +| -.+|++.+...+..... . .+++++|++....+....+ +...++++..|++.+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 3556665432 22 36788888766655544 4 6889999999887754322 3344558889999887776
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
. +.+.+...+++.++..++......
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~ 266 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIW 266 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHH
Confidence 5 888999999999999999866433
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=74.63 E-value=29 Score=31.88 Aligned_cols=89 Identities=16% Similarity=0.027 Sum_probs=66.3
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..||.+|++. -....+|...+...+..+... .+ +.+++++....+-.. ..+...++++..|+..+.+
T Consensus 7 ~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g-~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 7 RYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLG-VKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp HSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTT-SSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEE
T ss_pred hCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhC-CCccccccccCCccc-eeeeeeccccccccccccc
Confidence 4567777766 234578999888777664443 34 678888888888643 3346778899999999998
Q ss_pred C-CCCHHHHHHHHHhhcccEEEe
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~ 281 (349)
+ ......+...+++.++++++.
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 5 578899999999999999996
No 138
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.74 E-value=24 Score=33.51 Aligned_cols=93 Identities=15% Similarity=0.053 Sum_probs=66.1
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.++.+... +| -.+|+..+...+..+. .. .+++++|++....+-.. .+...+++++..|+.+++.
T Consensus 165 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 165 PDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA---EY-LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---Hh-hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 5667766432 22 3688888876554433 33 57899999988877543 3345678899999988875
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
+..+.+.+...+++.++.+++......
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~ 266 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMY 266 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHH
Confidence 567888999999999999988765443
No 139
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=73.09 E-value=9.2 Score=34.80 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=46.2
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
..+-..|.. +|+++||.|++- ..-+....-|+.++|+.++.+|-+ .+++.++..+..-. ++|+...
T Consensus 51 ~Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 51 SALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp HHHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred HHHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 445556777 899999999876 577888889999999999988644 57888888776443 5666544
No 140
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=72.97 E-value=18 Score=33.05 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-----CCCHHHHHHHHhhcCCeEEEEcC
Q 045351 68 IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-----SCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 68 ~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+..+.-.|+. +++++||.|.+ .+.-|+...=++...|+.++.+|- +++++.++..+... .+.|+.-+
T Consensus 59 T~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVh 130 (374)
T COG0399 59 TAALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVH 130 (374)
T ss_pred HHHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEeh
Confidence 4455556676 78999997664 378899999999999999999863 35788888888665 56666543
No 141
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=71.95 E-value=45 Score=27.40 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=53.3
Q ss_pred EEEEecCh--hhHhhH-HHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechH------HHHHHHhcCCCCCCC
Q 045351 230 VVLCTVPY--FHSYGF-TCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPP------VVLKMARDGGTMDGY 299 (349)
Q Consensus 230 ~~l~~~p~--~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~------~l~~l~~~~~~~~~~ 299 (349)
+++...+. .|..|. ......-..|-.++... ...++.+.+.+++++++.+..+-. .+..+.+.. ....
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l-~~~~- 163 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKL-KEEG- 163 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHH-HHcC-
Confidence 44444443 799998 33344455777888674 568899999999999998766532 223333332 1111
Q ss_pred CCcchheehccCCCCCHHHH
Q 045351 300 DLSSIEVVASGGAHLTLSVI 319 (349)
Q Consensus 300 ~l~~lr~i~~gG~~l~~~~~ 319 (349)
..+.+ .+++||.++.++..
T Consensus 164 ~~~~v-~i~vGG~~~~~~~~ 182 (197)
T TIGR02370 164 YRDSV-KFMVGGAPVTQDWA 182 (197)
T ss_pred CCCCC-EEEEEChhcCHHHH
Confidence 11223 37788989986543
No 142
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=71.60 E-value=23 Score=33.32 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=76.2
Q ss_pred eeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccE
Q 045351 203 GALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSH 278 (349)
Q Consensus 203 ~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 278 (349)
++.+|.+.+...+.++... ++ +.++|++..+.|-+...- ...+++-.+|..++... .+-...+.-.|++.++..
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lG-L~kGDrVgvwgpN~~~w~-l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLG-LKKGDRVGVWGPNSYEWV-LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhc-CCCCCEEEEecCChHHHH-HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 4567888887776665433 45 789999999999754332 45667888898888884 556677888899999999
Q ss_pred EEechHHHHH-----HHhc--------CCCCCCCCCcchheehccC
Q 045351 279 VVLAPPVVLK-----MARD--------GGTMDGYDLSSIEVVASGG 311 (349)
Q Consensus 279 l~~~P~~l~~-----l~~~--------~~~~~~~~l~~lr~i~~gG 311 (349)
++..|.+-.. |... ++..+...++.++.++..+
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 9988865432 3222 1345566788888888766
No 143
>PLN02736 long-chain acyl-CoA synthetase
Probab=70.54 E-value=77 Score=31.43 Aligned_cols=106 Identities=10% Similarity=-0.078 Sum_probs=74.5
Q ss_pred cCCCCcEEEEe--ccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEE
Q 045351 183 VSLSDPAAILY--SSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 183 ~~~~~~~~i~~--TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v 257 (349)
..++.+++..- ..|.+|. -..+|.+.+...+..+... .+ +.++|++...++-.-.+ +...++++..|+..+
T Consensus 56 ~~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~G-v~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~v 131 (651)
T PLN02736 56 TFRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHG-IPKGACVGLYFINRPEW-LIVDHACSAYSYVSV 131 (651)
T ss_pred hCCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEE
Confidence 35666665321 1232221 2457888888776665443 34 68899998888865443 245678889999988
Q ss_pred Ec-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhc
Q 045351 258 CM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARD 292 (349)
Q Consensus 258 ~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 292 (349)
.. +.+.++.+...++..+++.++..+..+..+...
T Consensus 132 pl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~ 167 (651)
T PLN02736 132 PLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSC 167 (651)
T ss_pred EeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHH
Confidence 77 467899999999999999999998887776553
No 144
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=69.67 E-value=2.3 Score=40.92 Aligned_cols=31 Identities=29% Similarity=0.236 Sum_probs=25.4
Q ss_pred cCCCCcEEEEeccCCCCC-CceeeechhhHHH
Q 045351 183 VSLSDPAAILYSSGTTGM-VKGALLTQRNLVA 213 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~-pK~v~~t~~~l~~ 213 (349)
..++.+.+...||||||. +|-|..|.+.+..
T Consensus 77 L~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 77 LTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp TSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 455678899999999999 9999999998755
No 145
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=68.89 E-value=48 Score=30.20 Aligned_cols=97 Identities=14% Similarity=0.017 Sum_probs=68.5
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.++++....| ..+|+..+...+..+.. . .+++++|++....+-... .+..+++.+..|+..+..+.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 456666643222 46788888776666554 3 567889999888775433 55667888888988887766
Q ss_pred CCC--HHHHHHHHhhcCCeEEEEcCcccccc
Q 045351 117 SCT--IPEILRQIHLSKPVIAFATHDTAHKI 145 (349)
Q Consensus 117 ~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~ 145 (349)
... .+.+..+++..++..+++.......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l 225 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALL 225 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHH
Confidence 554 78889999999999999877655433
No 146
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=67.61 E-value=16 Score=28.06 Aligned_cols=41 Identities=7% Similarity=-0.057 Sum_probs=33.4
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCC---CchHHHHHHHHHhcCCe
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQN---SVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~ 110 (349)
.++++.|.+ .|+.+.+.|++++.. +.....+++++..+|..
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 477888888 999999999999975 56667777888888854
No 147
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=65.83 E-value=53 Score=31.62 Aligned_cols=94 Identities=18% Similarity=0.046 Sum_probs=64.7
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++....| -.+|++.+...+... ... .++.++|++....|-. ..+...++..+..|+..+...
T Consensus 182 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 182 PEDVAVILFTSGTEKLPKGVPLTHANLLANQRAC---LKF-FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred cCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHH---HHh-cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 677787653222 468988887654433 333 6778899988887743 223334567778898877665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
....++.+...+++.++..+.......
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~ 284 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFF 284 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHH
Confidence 556788899999999999988766543
No 148
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.69 E-value=85 Score=30.15 Aligned_cols=80 Identities=9% Similarity=0.016 Sum_probs=57.9
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCC--CchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQN--SVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
-.+|+..+...+..+.. ..+++++|++....+- ....+..+++++..|+.++..........+...+++.++..
T Consensus 219 v~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~ 294 (558)
T PRK12583 219 ATLSHHNILNNGYFVAE----SLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTA 294 (558)
T ss_pred EEeeHHHHHHHHHHHHH----HhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeE
Confidence 46888888655443332 2578899999877663 34556677888889988875455567888888999999998
Q ss_pred EEEcCc
Q 045351 135 AFATHD 140 (349)
Q Consensus 135 i~~~~~ 140 (349)
++....
T Consensus 295 l~~~P~ 300 (558)
T PRK12583 295 LYGVPT 300 (558)
T ss_pred EeccHH
Confidence 877654
No 149
>PRK09274 peptide synthase; Provisional
Probab=65.12 E-value=55 Score=31.51 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=67.5
Q ss_pred CCCCcEEEEeccCCC-CCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 184 SLSDPAAILYSSGTT-GMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
.++.++++....++. ...+...+|...+...+..+...+ + +..++++...++-...+ ....++++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g-~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAG-IGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEc
Confidence 456666654333221 122333689998887766654433 4 68889999888865433 35678899999998888
Q ss_pred C-CCCHHHHHHHHHhhcccEEEech
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
+ .+....+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 5 56778888889999999888754
No 150
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=64.96 E-value=68 Score=29.41 Aligned_cols=88 Identities=10% Similarity=-0.013 Sum_probs=59.5
Q ss_pred CCCeEEEeCCCCceeeHHH--HHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHH
Q 045351 45 PDTTALIDTASRHRILYPD--LTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPE 122 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~--l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~ 122 (349)
+-.+.+-.++..-+.||+. ......+++..- .++| ++++.-+-....+.+++.++|+.+..+-|..++..
T Consensus 80 g~~vyLK~E~lQpsgSFK~RGa~~~~~kla~~~-----~~~g---ViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~ 151 (457)
T KOG1250|consen 80 GMPVYLKREDLQPSGSFKIRGAGNALQKLAKQQ-----KKAG---VIASSAGNHAQAAAYAARKLGIPATIVMPVATPLM 151 (457)
T ss_pred CCceEEEehhcccccceehhhHHHHHHHHHHhh-----hcCc---eEEecCccHHHHHHHHHHhcCCceEEEecCCChHH
Confidence 4455555544345566654 333333333333 2222 34455556677888999999999888889999999
Q ss_pred HHHHHhhcCCeEEEEcCc
Q 045351 123 ILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 123 l~~~l~~~~~~~i~~~~~ 140 (349)
..+.++..++.+++..+.
T Consensus 152 kiq~~~nlGA~Vil~G~~ 169 (457)
T KOG1250|consen 152 KIQRCRNLGATVILSGED 169 (457)
T ss_pred HHHHHhccCCEEEEeccc
Confidence 999999999999997654
No 151
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=64.79 E-value=33 Score=31.44 Aligned_cols=62 Identities=10% Similarity=-0.025 Sum_probs=41.0
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
..+.. +++++||.|++-. +.|.....++...|+.+++++.+ ...+.+...+.. +.++|+...
T Consensus 61 ~~l~a-l~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~ 127 (376)
T TIGR02379 61 MAALL-LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVH 127 (376)
T ss_pred HHHHH-cCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeC
Confidence 34455 6789999988753 44555666777889987777543 356677776643 567776544
No 152
>PRK08315 AMP-binding domain protein; Validated
Probab=64.40 E-value=68 Score=30.88 Aligned_cols=80 Identities=8% Similarity=-0.021 Sum_probs=58.0
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCC--CchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQN--SVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
-.+|+..+...+..+ ....+++++|++....+- ...++..+++++..|+..+.......+..+...+++.++..
T Consensus 217 v~~s~~~l~~~~~~~----~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~ 292 (559)
T PRK08315 217 ATLTHRNILNNGYFI----GEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTA 292 (559)
T ss_pred EEeeHHHHHHHHHHH----HHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeE
Confidence 467888776554433 323678999999887764 33445567888899988885556677888889999999998
Q ss_pred EEEcCc
Q 045351 135 AFATHD 140 (349)
Q Consensus 135 i~~~~~ 140 (349)
++....
T Consensus 293 ~~~~P~ 298 (559)
T PRK08315 293 LYGVPT 298 (559)
T ss_pred EecchH
Confidence 876543
No 153
>PLN03051 acyl-activating enzyme; Provisional
Probab=64.13 E-value=69 Score=30.43 Aligned_cols=93 Identities=9% Similarity=-0.097 Sum_probs=62.2
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++-.. +| -.+|+..+...+.. .... .++.++|++....|-+.. .+..+++++..|++.+....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~---~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASD---GWAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG 193 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHH---HHHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC
Confidence 4667766432 22 46788776554322 2234 678899998777664322 23456788899999887765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
....+.+...+++.++.++......
T Consensus 194 ~~~~~~~~~~i~~~~vt~~~~vP~~ 218 (499)
T PLN03051 194 APLGRGFGKFVQDAGVTVLGLVPSI 218 (499)
T ss_pred CCCcHHHHHHHHHhCCcEEEeCHHH
Confidence 4566788899999999998876544
No 154
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=63.54 E-value=55 Score=31.71 Aligned_cols=94 Identities=7% Similarity=-0.018 Sum_probs=64.1
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~ 115 (349)
++..|++... +| -.+|+..+...+. ..... .+++++|++....+.... ....+++.+..|++.+...
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~---~~~~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQ---TGKYV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHH---HHHHh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 4566666422 22 3678877755433 33344 678899987766654422 2455778888999888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
....++.+...+++.++.++.......
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~ 306 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAI 306 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHH
Confidence 677889999999999999988765443
No 155
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=63.35 E-value=76 Score=27.30 Aligned_cols=70 Identities=7% Similarity=0.033 Sum_probs=46.0
Q ss_pred HHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhc------C--CeEecCCCCC---CHHHHHHHHhhcCCeEE
Q 045351 68 IKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSL------G--VVVSPCNPSC---TIPEILRQIHLSKPVIA 135 (349)
Q Consensus 68 ~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~i~~~~---~~~~l~~~l~~~~~~~i 135 (349)
.+++.+.+.+ ++ +.+|++|+|...-+.+..+++..+..+ | ..++-++... ..+.++.+.+..+..+.
T Consensus 13 ~~~v~~~i~~-~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 13 RRQVGQAIAD-FNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHH-cCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445555666 55 678999999999999998887766442 2 3444555432 34445667777777766
Q ss_pred EEc
Q 045351 136 FAT 138 (349)
Q Consensus 136 ~~~ 138 (349)
+.+
T Consensus 92 v~~ 94 (258)
T PRK10696 92 IEE 94 (258)
T ss_pred EEE
Confidence 654
No 156
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=62.17 E-value=39 Score=32.66 Aligned_cols=89 Identities=13% Similarity=0.086 Sum_probs=72.1
Q ss_pred eeeechhhHHHHHhhhhcccc--C--CCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhccc
Q 045351 203 GALLTQRNLVAAVAGGHAVRA--A--RSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVS 277 (349)
Q Consensus 203 ~v~~t~~~l~~~~~~~~~~~~--~--~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t 277 (349)
|..+|++.+...+..+...+. . +.++|++....|-+..+. ...++++..|+.+.-. +.+++..+...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 779999999988877666554 1 577999999999765443 3566888899988777 467999999999999999
Q ss_pred EEEechHHHHHHHhc
Q 045351 278 HVVLAPPVVLKMARD 292 (349)
Q Consensus 278 ~l~~~P~~l~~l~~~ 292 (349)
.++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999988888887554
No 157
>PLN03102 acyl-activating enzyme; Provisional
Probab=61.87 E-value=83 Score=30.63 Aligned_cols=96 Identities=9% Similarity=0.012 Sum_probs=69.9
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.+|++. .+ -.+|.+.+...+..+...+ + +.+++++...+|-.-.+ ...+++++..|+.++..
T Consensus 26 ~~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~G-l~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl 94 (579)
T PLN03102 26 CYPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLN-ITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPI 94 (579)
T ss_pred hCCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeec
Confidence 3566676653 11 2588898887776655443 4 67899999999854332 35677899999988877
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
. .+++..+...++..+++.++..+.....+
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 95 NTRLDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred cccCCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 4 66899999999999999999877655443
No 158
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=61.68 E-value=46 Score=25.52 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=40.1
Q ss_pred cEEEEecCh-hhHhhH-HHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEech
Q 045351 229 AVVLCTVPY-FHSYGF-TCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 229 ~~~l~~~p~-~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
.+++.+.+- .|..|. ......-..|..++... ...++.+.+.+.+++++++..+-
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344444444 688888 44445557888888885 56889999999999999877653
No 159
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=61.43 E-value=41 Score=30.75 Aligned_cols=61 Identities=11% Similarity=-0.031 Sum_probs=40.7
Q ss_pred HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 74 SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.+.. .++++||.|++-.+ .+.....++...|+.++.++.+ .+.++++..+.. +.++|+...
T Consensus 62 ~l~~-~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~ 127 (375)
T PRK11706 62 AALL-LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVH 127 (375)
T ss_pred HHHH-hCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 3444 57889999887543 4455566777889987777532 457788877754 566666543
No 160
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=61.33 E-value=63 Score=29.81 Aligned_cols=90 Identities=8% Similarity=-0.065 Sum_probs=62.1
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc-hHHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV-RVPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~i~~ 116 (349)
.++++++... +| -.+|++.+...+...+. . .+++++|++....+-.. ..+..+++++..|+..+..++
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 185 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKE---N-LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHh---h-cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch
Confidence 4566665332 22 47899888776655544 3 57899999988877432 223456788899998887754
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
. +.+...+++.++..+......
T Consensus 186 ~---~~~~~~l~~~~~t~~~~~P~~ 207 (436)
T TIGR01923 186 F---NQLLEMIANERVTHISLVPTQ 207 (436)
T ss_pred H---HHHHHHHHHhCCeEEEeHHHH
Confidence 3 477888999999998876543
No 161
>PLN03052 acetate--CoA ligase; Provisional
Probab=60.53 E-value=94 Score=31.42 Aligned_cols=99 Identities=11% Similarity=0.077 Sum_probs=71.5
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.+|++.-..+..|.+ ...+|.+.+...+..+... .+ +.++|++...+|..--+ +...++++..|+..+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~G-v~~GdrVai~~pn~~e~-via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALG-FEKGDAIAIDMPMNVHA-VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeC
Confidence 457777665433322222 2458999888776665443 34 68999999999964433 45678899999998887
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHH
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPV 285 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~ 285 (349)
+.+.++.+...++..++..+++....
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 57889999999999999999887643
No 162
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=60.34 E-value=4.5 Score=39.41 Aligned_cols=30 Identities=27% Similarity=0.200 Sum_probs=25.5
Q ss_pred cCCCCcEEEEeccCCC-CCCceeeechhhHH
Q 045351 183 VSLSDPAAILYSSGTT-GMVKGALLTQRNLV 212 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~ 212 (349)
..++.+.+...||||| |.+|-|.+|.+.+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4467788999999999 88999999997664
No 163
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=60.30 E-value=70 Score=32.46 Aligned_cols=117 Identities=13% Similarity=0.106 Sum_probs=78.4
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc-----CCCCC-----------cEEEEecChhhHhhHHHH
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA-----ARSRP-----------AVVLCTVPYFHSYGFTCC 246 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~~-----------~~~l~~~p~~~~~g~~~~ 246 (349)
..++.+|++....| .+ -..+|.+.+...+..+...+. ++.++ +++....+-..-. +...
T Consensus 73 ~~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~ 147 (746)
T PTZ00342 73 LNNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVAD 147 (746)
T ss_pred hcCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH-HHHH
Confidence 34677777533222 11 135788888777666443332 25555 7887777754322 3567
Q ss_pred HhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehc
Q 045351 247 LRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVAS 309 (349)
Q Consensus 247 ~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~ 309 (349)
++++..|+..|-+ +.+.++.+...++.-++..++..+..+..+.... ..++.++.+++
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~-----~~~~~l~~ii~ 206 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK-----NELPHLKKLII 206 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh-----ccCCCceEEEE
Confidence 7889999998888 5789999999999999999999888887776542 12455665554
No 164
>PRK06839 acyl-CoA synthetase; Validated
Probab=58.58 E-value=1.3e+02 Score=28.29 Aligned_cols=97 Identities=8% Similarity=-0.014 Sum_probs=71.3
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc----cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR----AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
..++.++++. .+..+|...+...+..+...+ + +.+++++....+-...+ ....++++..|+..+.
T Consensus 14 ~~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g-~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 14 LHPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELN-VKKGERIAILSQNSLEY-IVLLFAIAKVECIAVP 82 (496)
T ss_pred HCCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEe
Confidence 3456666652 135789999988777665443 3 67888888888866443 3567789999999888
Q ss_pred cC-CCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 259 MG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 259 ~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
.+ ...+..+...+++.+++.++..+.....+.
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHH
Confidence 85 468888889999999999998887765543
No 165
>PRK06164 acyl-CoA synthetase; Validated
Probab=58.15 E-value=72 Score=30.56 Aligned_cols=93 Identities=16% Similarity=0.103 Sum_probs=64.7
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.++++... +| -.+|...+...+..++.. +++.+++++...+|-+ ...+..+++++..|+.++.. +
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 4667776532 22 467888887665544433 5678999999888743 33345678888889888766 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
......+...+++.++.+++......
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l 280 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEML 280 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHH
Confidence 56778888899999999988765433
No 166
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=58.09 E-value=1e+02 Score=30.47 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=70.0
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.+|++..... ......+|.+.+...+..+...+ + +..+|++...+|-.-.+ +...++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALKSLG-VKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecC
Confidence 4677777643211 11345789999988776655443 4 67899999988864433 356778999999988884
Q ss_pred -CCCHHHHHHHHHhhcccEEEechH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
.+.+..+...++..++..++....
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 678899999999999999987654
No 167
>PRK08316 acyl-CoA synthetase; Validated
Probab=57.77 E-value=98 Score=29.35 Aligned_cols=86 Identities=13% Similarity=-0.025 Sum_probs=64.0
Q ss_pred eeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 204 ALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
..+|...+...+..+...+. .+.+++++....|-... .+...++++..|+..+..+ .+....+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 56888888776655443332 26788888888775443 3457788999999988885 56888899999999999999
Q ss_pred echHHHHHHH
Q 045351 281 LAPPVVLKMA 290 (349)
Q Consensus 281 ~~P~~l~~l~ 290 (349)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8887766554
No 168
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=57.40 E-value=58 Score=30.88 Aligned_cols=81 Identities=11% Similarity=-0.050 Sum_probs=60.8
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
-.+|+..+...+...... .++.+||++...++-+.. .+..+++++..|+..+..+ ....+.+...+++.++.++
T Consensus 179 v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY----LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGL 253 (515)
T ss_pred EEEecHHHHHHHHHHHHH----hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceE
Confidence 568888887766655432 467899999988885432 3556788899999988664 4678888999999999998
Q ss_pred EEcCccc
Q 045351 136 FATHDTA 142 (349)
Q Consensus 136 ~~~~~~~ 142 (349)
.......
T Consensus 254 ~~~P~~~ 260 (515)
T TIGR03098 254 AAVPPLW 260 (515)
T ss_pred ecChHHH
Confidence 8876543
No 169
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=56.84 E-value=1.1e+02 Score=30.22 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=68.8
Q ss_pred CCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-C
Q 045351 185 LSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-G 260 (349)
Q Consensus 185 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~ 260 (349)
++.+|++.-..+ .+ ....+|.+.+...+..+... .+ +.++|++...+|..-.+ +...++++..|+..+.. .
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~G-v~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLN-ISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFD 149 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCC
Confidence 466666543221 11 23568999998777665544 35 78999999999975544 34677889999997777 5
Q ss_pred CCCHHHHHHHHHhhcccEEEech
Q 045351 261 KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
.+.++.+...++..+++.+++..
T Consensus 150 ~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 GYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcc
Confidence 78999999999999999998764
No 170
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=56.79 E-value=1.1e+02 Score=30.13 Aligned_cols=97 Identities=16% Similarity=0.128 Sum_probs=70.0
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.+|++.... .+| ....+|.+.+...+..+... .+ +.+++++...+|..-.+ +...++++..|+..+..
T Consensus 69 ~~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 69 ARPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLG-VKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVV 143 (625)
T ss_pred cCCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEecc
Confidence 3567777764322 122 24568999988776665443 34 68899999999865433 45677899999998877
Q ss_pred -CCCCHHHHHHHHHhhcccEEEechH
Q 045351 260 -GKFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 260 -~~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
+.+.+..+...++..+++.++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 4678999999999999999887654
No 171
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=56.79 E-value=11 Score=36.66 Aligned_cols=29 Identities=31% Similarity=0.206 Sum_probs=24.6
Q ss_pred CCCcEEEEeccCCCC-CCceeeechhhHHH
Q 045351 185 LSDPAAILYSSGTTG-MVKGALLTQRNLVA 213 (349)
Q Consensus 185 ~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~ 213 (349)
++.+.+...|||||| .+|-|.+|++.+-.
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 117 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDR 117 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHH
Confidence 577788999999995 89999999887643
No 172
>PLN02565 cysteine synthase
Probab=56.59 E-value=99 Score=27.67 Aligned_cols=92 Identities=7% Similarity=-0.137 Sum_probs=63.4
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
.++.+-.+..+-.-||++= -+..+-..+.+ .| +.+|...++....+=.-..+.+++-.+|..+..+-|...+....
T Consensus 30 ~~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~-~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~ 106 (322)
T PLN02565 30 ARIAAKLEMMEPCSSVKDR--IGYSMITDAEE-KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERR 106 (322)
T ss_pred ceEEEEecccCCccchHHH--HHHHHHHHHHH-cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHH
Confidence 3566655544555666653 23333334444 45 47886655666666667777778888999888777777888889
Q ss_pred HHHhhcCCeEEEEcCc
Q 045351 125 RQIHLSKPVIAFATHD 140 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~ 140 (349)
..++..++++++++..
T Consensus 107 ~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 107 IILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHcCCEEEEeCCC
Confidence 9999999999998763
No 173
>PLN02654 acetate-CoA ligase
Probab=56.18 E-value=1.2e+02 Score=30.19 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=69.2
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.+|++..... .| ....+|.+.|...+..+... .+ +.++|++...+|..-.+ +...++++..|+..+..
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~G-v~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVG-VKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecC
Confidence 4566666532211 11 23568999998777665443 34 68999999999875433 35777889999998877
Q ss_pred CCCCHHHHHHHHHhhcccEEEechH
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
+.+.++.+...++..++..+++...
T Consensus 177 ~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 177 AGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5789999999999999999987654
No 174
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=56.00 E-value=1.2e+02 Score=28.82 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=70.4
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++.... .+. .-.+|...+...+..+... .+ +.+++++....+-...+- ...++++..|+..+..
T Consensus 19 ~~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~~g-~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l 92 (517)
T PRK08008 19 VYGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYSLG-IRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPI 92 (517)
T ss_pred HCCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEc
Confidence 4566677654321 111 1347888887766665443 34 678899988888655443 4667899999998877
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
. .+.++.+...+++.+++.++..+.....+
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 4 66889999999999999999888665443
No 175
>PLN03013 cysteine synthase
Probab=55.82 E-value=1.4e+02 Score=27.90 Aligned_cols=91 Identities=9% Similarity=-0.112 Sum_probs=60.4
Q ss_pred CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 47 TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 47 ~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
++.+-.+..+-.-|+++ + -+..+.....+ .| +.+|+..++....+=.-+.+.++|...|..+..+-|...+.+...
T Consensus 139 ~Iy~KlE~lNPtGSfKd-R-~A~~~l~~a~~-~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~ 215 (429)
T PLN03013 139 NIAAKLEIMEPCCSVKD-R-IGYSMVTDAEQ-KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRV 215 (429)
T ss_pred eEEEEeccCCCccccHH-H-HHHHHHHHHHH-cCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHH
Confidence 34443443344566666 2 22233333344 44 688866666666677777777888889987777766667778888
Q ss_pred HHhhcCCeEEEEcCc
Q 045351 126 QIHLSKPVIAFATHD 140 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~ 140 (349)
.++..++++++++..
T Consensus 216 ~ira~GAeVi~v~~~ 230 (429)
T PLN03013 216 LLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCEEEEECCC
Confidence 999999999999754
No 176
>PRK06188 acyl-CoA synthetase; Validated
Probab=55.67 E-value=1.4e+02 Score=28.34 Aligned_cols=91 Identities=13% Similarity=0.068 Sum_probs=65.0
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS 117 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~ 117 (349)
++++|.+....| -.+|+..+...+.. .... .++..+|++....+-+..+...+++.+..|++.+..+ .
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~---~~~~-~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~ 241 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQI---QLAE-WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-K 241 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHH---HHhh-cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-C
Confidence 344666543222 45778776665443 3333 6788999999988877666667788888898888775 4
Q ss_pred CCHHHHHHHHhhcCCeEEEEcCc
Q 045351 118 CTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 118 ~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
..++.+...+++.++.+++....
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~ 264 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPT 264 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHH
Confidence 56788899999999999887654
No 177
>PRK07788 acyl-CoA synthetase; Validated
Probab=55.53 E-value=73 Score=30.64 Aligned_cols=85 Identities=9% Similarity=-0.051 Sum_probs=64.2
Q ss_pred eechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEe
Q 045351 205 LLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 281 (349)
.+|.+.+...+..+...+. ++.+++++....+-.- ..+..+++++..|+..+..+ .+..+.+...+++.+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5888888776666544332 2678899888887533 33457789999999999885 568899999999999999998
Q ss_pred chHHHHHHH
Q 045351 282 APPVVLKMA 290 (349)
Q Consensus 282 ~P~~l~~l~ 290 (349)
.+.+...+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887766553
No 178
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=54.58 E-value=1.2e+02 Score=29.28 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=63.5
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++-. .+| -.+|...+...+.... .. .++.++|++....|-. ...+...++.+..|++.+.. +
T Consensus 171 ~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 171 PDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 567776643 223 4678887765444332 34 6788999988887743 22334567788889887765 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
......+...+++.++..+.......
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~ 271 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMM 271 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHH
Confidence 57788899999999999988766543
No 179
>PRK08308 acyl-CoA synthetase; Validated
Probab=54.46 E-value=1.6e+02 Score=26.99 Aligned_cols=93 Identities=9% Similarity=0.048 Sum_probs=63.8
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~ 115 (349)
++..+++... +| -.+|++.+...+..+... .++..+|++....|-.. .++..++..+..|+..+..+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA----LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh----hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 5566665432 22 468998887665555443 55678898888777543 33456788889999887665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
...++.+...+++.++.+++......
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~ 201 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLML 201 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHH
Confidence 45677788889999999888765433
No 180
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=54.26 E-value=65 Score=29.50 Aligned_cols=65 Identities=12% Similarity=0.024 Sum_probs=42.1
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~ 138 (349)
..+...|.. +++++||.|++-. +.|.....++...|+.++.++.. ...+.++..+.. +.++|+..
T Consensus 59 ~al~lal~a-l~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~ 128 (379)
T PRK11658 59 AGMHITLMA-LGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV 128 (379)
T ss_pred HHHHHHHHH-cCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe
Confidence 344455666 7789999987654 34555556677889988776532 456777777653 56666633
No 181
>PLN02246 4-coumarate--CoA ligase
Probab=53.91 E-value=1.3e+02 Score=28.88 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=64.4
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~ 115 (349)
++.++++... +| -.+|+..+...+...........++.++|++....+-... +...+++.+..|++++..+
T Consensus 178 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 257 (537)
T PLN02246 178 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP 257 (537)
T ss_pred ccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 5677775422 22 4678888776655444333222678999999888774322 2344677888999988876
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
. ...+++...+++.++..+.....
T Consensus 258 ~-~~~~~~~~~i~~~~~t~~~~~p~ 281 (537)
T PLN02246 258 K-FEIGALLELIQRHKVTIAPFVPP 281 (537)
T ss_pred C-CCHHHHHHHHHHhCceEEEcchH
Confidence 4 57788889999999988876554
No 182
>PRK13388 acyl-CoA synthetase; Provisional
Probab=53.49 E-value=1.3e+02 Score=28.96 Aligned_cols=96 Identities=15% Similarity=-0.010 Sum_probs=68.4
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CC-CCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--AR-SRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~-~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.++++. ++..+|...+...+..+...+. .+ .+++++...++-...+ ....++++..|+..+.++
T Consensus 14 ~p~~~Al~~---------~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~ 83 (540)
T PRK13388 14 GDDTIAVRY---------GDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLN 83 (540)
T ss_pred cCCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEec
Confidence 356676543 1236899998877766554442 14 5778888888865443 346778999999998875
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
.+....+...+++.++..++........+
T Consensus 84 p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 113 (540)
T PRK13388 84 TTRRGAALAADIRRADCQLLVTDAEHRPLL 113 (540)
T ss_pred ccCChHHHHHHHHhcCCCEEEEChhhhHHH
Confidence 56788999999999999998877655443
No 183
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=53.37 E-value=1.4e+02 Score=28.19 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=65.0
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~ 115 (349)
++.++++....| -.+|++.+...+.... ... .+++++|++....+-... +...+++.+..|++.+..+
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNT-LGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHh-cCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 566776643222 4678888766543321 233 688999998877775443 3344566788898888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
...+...+...+++.++.++......
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~ 262 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTL 262 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHH
Confidence 66678889999999999999887643
No 184
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=53.31 E-value=77 Score=26.43 Aligned_cols=88 Identities=20% Similarity=0.277 Sum_probs=57.0
Q ss_pred cEEEEecCh-hhHhhH-HHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechHH------HHHHHhcCCCCCCC
Q 045351 229 AVVLCTVPY-FHSYGF-TCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPV------VLKMARDGGTMDGY 299 (349)
Q Consensus 229 ~~~l~~~p~-~~~~g~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~------l~~l~~~~~~~~~~ 299 (349)
.+++.+.+= .|..|. .....--..|-.++... ...++.+.+.+.+++++++.++-.+ +..+++.. ....
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L-~~~~- 167 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEM-NRRG- 167 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHH-HhcC-
Confidence 445555553 788888 44445556788888885 5689999999999999987665332 22222222 1111
Q ss_pred CCcchheehccCCCCCHHHHHH
Q 045351 300 DLSSIEVVASGGAHLTLSVIRK 321 (349)
Q Consensus 300 ~l~~lr~i~~gG~~l~~~~~~~ 321 (349)
+ .++ +++||.+++++..+.
T Consensus 168 -~-~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 168 -I-KIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred -C-CCe-EEEEChhcCHHHHhh
Confidence 1 333 678899999887765
No 185
>PRK07529 AMP-binding domain protein; Validated
Probab=53.27 E-value=1.1e+02 Score=30.26 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=66.2
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++....+.. ..+...+|.+.+...+..+...+ + +.+++++...+|-...+ +...++++..|. .+..
T Consensus 37 ~~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~G-i~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi 112 (632)
T PRK07529 37 RHPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLG-VGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPI 112 (632)
T ss_pred HCCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeC
Confidence 4567777766543321 12345789999887666654433 4 68899999999965443 345666777774 3333
Q ss_pred -CCCCHHHHHHHHHhhcccEEEech
Q 045351 260 -GKFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 -~~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
+.+.++.+...+++.++..++...
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEeC
Confidence 567899999999999999988753
No 186
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=52.95 E-value=69 Score=28.98 Aligned_cols=202 Identities=13% Similarity=0.083 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC---------CCHHHHHHHHhhcCC
Q 045351 62 PDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS---------CTIPEILRQIHLSKP 132 (349)
Q Consensus 62 ~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~---------~~~~~l~~~l~~~~~ 132 (349)
+.+...+..++..|.+ .+-|.|++++ +..+.+.+.+|+.++++.++-+... ...+..++++.+. +
T Consensus 50 ~~~~~~~~~~~~~~~~----~~Pd~Vlv~G-D~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~l-a 123 (346)
T PF02350_consen 50 KSTGLAIIELADVLER----EKPDAVLVLG-DRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKL-A 123 (346)
T ss_dssp HHHHHHHHHHHHHHHH----HT-SEEEEET-TSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHh----cCCCEEEEEc-CCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhh-h
Confidence 5666777788888887 3457777664 5888999999999999999988766 6677777777777 4
Q ss_pred eEEEEcC-ccccccccc---CcceEEeCCCCccccccccCCCCCCCCccc--ccc-ccCCCCcEEEEeccCCCCC-Ccee
Q 045351 133 VIAFATH-DTAHKIPQL---KYGTVLLDSPEFEPLSATDSLDYYDDDEER--VRV-SVSLSDPAAILYSSGTTGM-VKGA 204 (349)
Q Consensus 133 ~~i~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~i~~TSGtTG~-pK~v 204 (349)
++.|+.. ...+.+... ..++.+++...++.+...... ..... ... ....+..+++.+-.-+... |.
T Consensus 124 ~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~----~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~-- 197 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEE----IEEKYKNSGILQDAPKPYILVTLHPVTNEDNPE-- 197 (346)
T ss_dssp SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHT----TCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH---
T ss_pred hhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHH----HhhhhhhHHHHhccCCCEEEEEeCcchhcCChH--
Confidence 5555554 334444443 335777776555544322111 01000 000 1133333333332222222 21
Q ss_pred eechhhHHHHHhhhhccccCCCCCcEEEEecC--hhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEec
Q 045351 205 LLTQRNLVAAVAGGHAVRAARSRPAVVLCTVP--YFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLA 282 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p--~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~ 282 (349)
.-+.+...+..+.. ..+-.++...| ......+...+..+ . .+.+.++.....++.+++. +.++.+-
T Consensus 198 --~~~~i~~~l~~L~~-----~~~~~vi~~~hn~p~~~~~i~~~l~~~-~--~v~~~~~l~~~~~l~ll~~--a~~vvgd 265 (346)
T PF02350_consen 198 --RLEQILEALKALAE-----RQNVPVIFPLHNNPRGSDIIIEKLKKY-D--NVRLIEPLGYEEYLSLLKN--ADLVVGD 265 (346)
T ss_dssp ---HHHHHHHHHHHHH-----HTTEEEEEE--S-HHHHHHHHHHHTT--T--TEEEE----HHHHHHHHHH--ESEEEES
T ss_pred --HHHHHHHHHHHHHh-----cCCCcEEEEecCCchHHHHHHHHhccc-C--CEEEECCCCHHHHHHHHhc--ceEEEEc
Confidence 11222222222222 12334555555 22222223334444 3 6666666777888888875 5666666
Q ss_pred hHHHH
Q 045351 283 PPVVL 287 (349)
Q Consensus 283 P~~l~ 287 (349)
.+-+.
T Consensus 266 SsGI~ 270 (346)
T PF02350_consen 266 SSGIQ 270 (346)
T ss_dssp SHHHH
T ss_pred CccHH
Confidence 65444
No 187
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=52.88 E-value=1.7e+02 Score=27.36 Aligned_cols=93 Identities=12% Similarity=-0.039 Sum_probs=63.2
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.++++... +| -.+|++.+...+.. .... .+++++|++....|-... .+..+++.+..|+.++..+
T Consensus 140 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~---~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 140 LDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVG---SALN-LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHH---HHHh-cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 5666665432 22 36788877654322 2233 688999999998874322 2334577778899888765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
..+..++...+++.++..+.......
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~ 240 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTML 240 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHH
Confidence 56788999999999999988866543
No 188
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=52.83 E-value=1.3e+02 Score=24.72 Aligned_cols=86 Identities=20% Similarity=0.192 Sum_probs=52.4
Q ss_pred cEEEEecCh-hhHhhHHHHH-hhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechH------HHHHHHhcCCCCCCC
Q 045351 229 AVVLCTVPY-FHSYGFTCCL-RSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPP------VVLKMARDGGTMDGY 299 (349)
Q Consensus 229 ~~~l~~~p~-~~~~g~~~~~-~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~------~l~~l~~~~~~~~~~ 299 (349)
.+++.+.|- .|..|...+- ..-..|..++... ...++.+.+.+.+++++.+..+-. .+..+++.. .....
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l-r~~~~ 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEAL-KEAGL 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHH-HHCCC
Confidence 345555553 7988884333 4446788887664 568899999999999998765432 223333332 11111
Q ss_pred CCcchheehccCCCCCHH
Q 045351 300 DLSSIEVVASGGAHLTLS 317 (349)
Q Consensus 300 ~l~~lr~i~~gG~~l~~~ 317 (349)
...+ .++.||.++..+
T Consensus 163 -~~~~-~i~vGG~~~~~~ 178 (201)
T cd02070 163 -RDKV-KVMVGGAPVNQE 178 (201)
T ss_pred -CcCC-eEEEECCcCCHH
Confidence 1123 367788888875
No 189
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=52.59 E-value=1.4e+02 Score=30.06 Aligned_cols=87 Identities=9% Similarity=0.057 Sum_probs=66.6
Q ss_pred eeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEE
Q 045351 204 ALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l 279 (349)
..+|.+.+...+..+... .+ +.+++++...++-..-. +...++++..|+..|-. ..+.++.+...++..++..+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG-~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALG-HNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 457888888777665443 34 67899988888754433 34667888999998877 56789999999999999999
Q ss_pred EechHHHHHHHhc
Q 045351 280 VLAPPVVLKMARD 292 (349)
Q Consensus 280 ~~~P~~l~~l~~~ 292 (349)
+.....+..+...
T Consensus 183 i~~~~~~~~l~~~ 195 (696)
T PLN02387 183 ICDSKQLKKLIDI 195 (696)
T ss_pred EECHHHHHHHHHH
Confidence 9988888777654
No 190
>PRK05857 acyl-CoA synthetase; Validated
Probab=52.57 E-value=99 Score=29.72 Aligned_cols=96 Identities=20% Similarity=0.130 Sum_probs=68.3
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
...|+.++++.. .| ...+|.+.+...+..+...+. .+.+++++...++-...+ +...++++..|+..+..
T Consensus 25 ~~~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 25 RQQPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMA 96 (540)
T ss_pred hhCCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEec
Confidence 345667666432 22 145899999877766554432 267889998888765544 45688899999999988
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPV 285 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~ 285 (349)
+ .+..+.+...++..++..++..+..
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccc
Confidence 5 5688888899998898888877654
No 191
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=52.54 E-value=1.2e+02 Score=29.13 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=69.0
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++..-.+ .++...+|...+...+..+...+ + +.+++++...++-...+ ....++++..|+..+..
T Consensus 36 ~~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~~g-~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl 110 (547)
T PRK13295 36 SCPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLARLG-VGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPL 110 (547)
T ss_pred HCCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecc
Confidence 34566766543322 33445789998887666654433 4 67899999888865544 45677899999998877
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
. ....+.+...++..++..++....
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 111 MPIFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccccCHHHHHHHHHhcCceEEEEecc
Confidence 4 567888889999999998887654
No 192
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=52.35 E-value=1.5e+02 Score=29.38 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=68.3
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.+|++.... .| ....+|.+.+......+...+ + +.++|++...+|..-.+ +...++++..|+..+..
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALG-VGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeC
Confidence 356677654322 22 135689998887766654433 4 67899999999864433 45678899999998877
Q ss_pred CCCCHHHHHHHHHhhcccEEEechH
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
+.+.+..+...++..++..+++...
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 171 PDFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCCHHHHHHHHHHcCCcEEEEccc
Confidence 4678899999999999998887653
No 193
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.31 E-value=1.4e+02 Score=28.95 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=62.7
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.++++-.. +| -.+|+..+...+..+. .... .++.+++++...+|-...+ +...++++..|+..+...+
T Consensus 180 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 180 ETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDS-LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred ccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhh-cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 5666666432 22 4678887765443322 2233 6789999998887744332 3345777888888776666
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
...++.+...+++.++..++....
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~ 281 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPT 281 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCH
Confidence 678889999999998888877554
No 194
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.17 E-value=1.3e+02 Score=28.97 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=69.0
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc---CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA---ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.++++. . +..+|...+...+..+...+. ++..++++...+|-.-.+ ....++++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecC
Confidence 466677653 1 235899999887777654431 267899999988864433 356778999999988775
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVLK 288 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (349)
.+..+.+...+++.++..++........
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 135 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAHL 135 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhhh
Confidence 5688899999999999998876655443
No 195
>PRK07470 acyl-CoA synthetase; Validated
Probab=51.91 E-value=1.8e+02 Score=27.67 Aligned_cols=96 Identities=10% Similarity=0.032 Sum_probs=60.7
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC-C
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN-P 116 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~-~ 116 (349)
++.++++....| -.+|...+...+......+. .++.++|++..+.|-+..+-+..+..+..|+..+.+. .
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 566777653222 46788877544332222221 1568889999888866544443444455666655443 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
..+.+.+...+++.++.++.......
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~ 265 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTIL 265 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHH
Confidence 56788899999999999998876544
No 196
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=51.45 E-value=1.7e+02 Score=25.72 Aligned_cols=92 Identities=9% Similarity=-0.045 Sum_probs=58.4
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.+..+..=||+. +.....+...+.+ .-+.+|+.|+ ....+-.-..+-++|.+.|..+..+-|...++....
T Consensus 22 ~~i~~K~E~~~ptGS~K~-R~a~~~~~~a~~~-g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD-RIALSMIEDAEKR-GLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH-HHHHHHHHHHHHc-CCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 355555553344456664 3333334444443 2247777664 555566666777788889987776666665566677
Q ss_pred HHhhcCCeEEEEcCc
Q 045351 126 QIHLSKPVIAFATHD 140 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~ 140 (349)
.++..++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998764
No 197
>PLN02574 4-coumarate--CoA ligase-like
Probab=50.42 E-value=1.4e+02 Score=28.93 Aligned_cols=99 Identities=23% Similarity=0.213 Sum_probs=69.1
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc----ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV----RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
..++.++++. +.+| ..+|.+.+......+... .+ +.++|++....+-...+ +...+.++..|+..+.
T Consensus 51 ~~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G-~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~ 121 (560)
T PLN02574 51 NHNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMG-VRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTT 121 (560)
T ss_pred ccCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeC
Confidence 3456666653 2222 146888887666554433 34 67899999988855333 3567789999999887
Q ss_pred cC-CCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 259 MG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 259 ~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
.+ .+....+...+++.++..++..+.....+.
T Consensus 122 l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 122 MNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cCcccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 75 567888899999999998888877665543
No 198
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=49.94 E-value=2e+02 Score=27.77 Aligned_cols=95 Identities=19% Similarity=0.083 Sum_probs=67.7
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++-...| ..+|++.+...+..+...+.. ++.+.|+++..+|-. .-+...+++.+..|+..+...
T Consensus 170 ~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~--~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 170 PDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG--GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc--cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 677777643222 578999999887777666654 278899888888733 445556777788898888777
Q ss_pred C-CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 116 P-SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 116 ~-~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
+ ....+.+...+.+.+...+......
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~ 274 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTF 274 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHH
Confidence 5 6788888888888876666655443
No 199
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=49.72 E-value=1.2e+02 Score=23.30 Aligned_cols=55 Identities=11% Similarity=-0.008 Sum_probs=41.5
Q ss_pred CEEEEEcCCCc----hHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 85 DVAFLLSQNSV----RVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 85 d~V~i~~~n~~----~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.+|++.+..+. -..+....+-..|.-++-+..+.+.+++...+.+.+|++|..+.
T Consensus 4 ~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 4 KTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred CEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34555544332 23344455667899999999999999999999999999999875
No 200
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=49.63 E-value=93 Score=28.40 Aligned_cols=67 Identities=7% Similarity=-0.005 Sum_probs=43.9
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-----CCCHHHHHHHHhh---cCCeEEEEcC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-----SCTIPEILRQIHL---SKPVIAFATH 139 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~---~~~~~i~~~~ 139 (349)
..+...+.. +++++||.|++-.+ .+....-++...|+.++.++. ....+.++..++. -+.++|+...
T Consensus 55 ~al~~~l~a-l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~ 129 (380)
T TIGR03588 55 SALHIACLA-LGVGPGDRVWTTPI---TFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD 129 (380)
T ss_pred HHHHHHHHH-cCCCCCCEEEeCCc---chHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC
Confidence 445555666 67899999877654 345555667788987776543 2467888888763 3556666443
No 201
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=49.61 E-value=1.5e+02 Score=28.47 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=68.0
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.++++.. +..+|..++...+..+...+ + +..++++...++-.... +...++++..|+..+...
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~g-i~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRG-LAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccC
Confidence 4566666541 24689999987766654433 4 67889998888764433 356688999999998775
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVLK 288 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (349)
.+.+..+...+++.+++.++....+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 133 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFATT 133 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhHHH
Confidence 5678899999999999998887765443
No 202
>PRK07798 acyl-CoA synthetase; Validated
Probab=49.60 E-value=1.9e+02 Score=27.45 Aligned_cols=85 Identities=11% Similarity=-0.012 Sum_probs=61.3
Q ss_pred eeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEE
Q 045351 204 ALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (349)
-.+|...+...+..+...+ + +..++++....+-.-.+ +...++.+..|+..+..+ .+....+...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g-~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQG-LGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 4688888877666544433 4 57788888887654332 356778889999988775 5678888899999999999
Q ss_pred EechHHHHHHH
Q 045351 280 VLAPPVVLKMA 290 (349)
Q Consensus 280 ~~~P~~l~~l~ 290 (349)
+........+.
T Consensus 105 ~~~~~~~~~~~ 115 (533)
T PRK07798 105 VYEREFAPRVA 115 (533)
T ss_pred EEchhhHHHHH
Confidence 88776555543
No 203
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.53 E-value=1e+02 Score=29.56 Aligned_cols=85 Identities=11% Similarity=0.006 Sum_probs=64.4
Q ss_pred eechhhHHHHHhhhhccc----cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEE
Q 045351 205 LLTQRNLVAAVAGGHAVR----AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (349)
.+|...+...+..+...+ + +..++++....+-. ...+...++++..|+..+..+ ...+..+...+++.+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g-~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECG-VRKGDRVLLYMQNS-PQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhC-CCCCCEEEEECCCC-hHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 478888877766654433 4 67889988888854 344467888999999988775 5688899999999999999
Q ss_pred EechHHHHHHHh
Q 045351 280 VLAPPVVLKMAR 291 (349)
Q Consensus 280 ~~~P~~l~~l~~ 291 (349)
+..+.....+.+
T Consensus 113 i~~~~~~~~~~~ 124 (546)
T PRK08314 113 IVGSELAPKVAP 124 (546)
T ss_pred EEccchhhhHHH
Confidence 988877665543
No 204
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=48.04 E-value=86 Score=29.46 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=37.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
++++||.|++-. +.|.....++...|+.+++++.. ...+.+...+.. +.++|+...
T Consensus 107 ~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 107 ALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred CCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 789999988664 34455566777889987776542 356777776643 556666543
No 205
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=47.87 E-value=32 Score=28.09 Aligned_cols=34 Identities=6% Similarity=0.118 Sum_probs=29.4
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEE
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLL 90 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~ 90 (349)
..-+||.++++.++++|..+.+ -|.+|.-.|++.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiaia 37 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAIA 37 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEEc
Confidence 3678999999999999999998 899988666655
No 206
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=47.86 E-value=33 Score=23.65 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=31.0
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR 96 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~ 96 (349)
.++..++.-..+...|-.+=.+.-+.++..|.++.|+.+.|+..++..|..+
T Consensus 26 s~~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~e 77 (82)
T PF14552_consen 26 SDDFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPRE 77 (82)
T ss_dssp -TT-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-GG
T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCcc
Confidence 3444554432345666677777788889999877999999998888877654
No 207
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=47.72 E-value=2e+02 Score=28.04 Aligned_cols=97 Identities=12% Similarity=0.125 Sum_probs=70.0
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++.- .-.+|...+...+..+... .+ +.+++++...++-...+ +..+++++..|+..+..
T Consensus 49 ~~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g-~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l 117 (600)
T PRK08279 49 RHPDRPALLFE---------DQSISYAELNARANRYAHWAAARG-VGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALL 117 (600)
T ss_pred hCCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcC-CCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeec
Confidence 34667766541 2357888887766665443 34 67889998888765433 46788899999998877
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
+ ......+...+++.+++.++........+.
T Consensus 118 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 149 (600)
T PRK08279 118 NTQQRGAVLAHSLNLVDAKHLIVGEELVEAFE 149 (600)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHHH
Confidence 5 567788889999999999998876665543
No 208
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=47.68 E-value=1.2e+02 Score=29.11 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=66.6
Q ss_pred eechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEe
Q 045351 205 LLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 281 (349)
.+|.+.+...+..+...+. .+.+++++....|-...+ +...++.+..|+..+..+ .+....+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 5888888877766554432 167889998888865554 457888999999988874 568899999999999999999
Q ss_pred chHHHHHHHh
Q 045351 282 APPVVLKMAR 291 (349)
Q Consensus 282 ~P~~l~~l~~ 291 (349)
.......+..
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766544
No 209
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=47.60 E-value=1.3e+02 Score=28.97 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=68.3
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
..++.++++-... +..+|.+.+...+..+...+. ++.+++++...++-...+ +...++++..|+..+..+
T Consensus 40 ~~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 40 LYADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGAN 111 (546)
T ss_pred cCCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCC
Confidence 3466666653221 246899998877666544332 157889988888765544 346788999999888774
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
......+...+++.++..++..+..+..+
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 45778888999999999888776655443
No 210
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=47.49 E-value=1.1e+02 Score=28.63 Aligned_cols=57 Identities=25% Similarity=0.185 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCCchHHHHH--HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLY--LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~--lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++- ++.+.....+ ..+.+.|+.+..++.....++++..++. +.++|+++.
T Consensus 97 l~~GD~VI~~-~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~ 155 (432)
T PRK06702 97 CSSGDHLLCS-STVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAES 155 (432)
T ss_pred cCCCCEEEEC-CCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEc
Confidence 6788877653 3344322222 2356778888888776677777777754 566776654
No 211
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=47.25 E-value=59 Score=26.25 Aligned_cols=51 Identities=12% Similarity=-0.027 Sum_probs=37.0
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
..-+||+|+.+.+.++|..+.++++ ....+.+...++-..+...+|-. +|.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~--~~~~viV~i~~gg~~~A~~La~~-l~~ 64 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLA--DENPLVLCVMGGGLVFTGQLLPR-LDF 64 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcC--CCCeEEEEECCCcHHHHHHHHHH-cCC
Confidence 5779999999999999999998333 22345566677777777777643 554
No 212
>PRK11761 cysM cysteine synthase B; Provisional
Probab=47.13 E-value=2e+02 Score=25.30 Aligned_cols=90 Identities=8% Similarity=-0.076 Sum_probs=59.8
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
.++.+-.+..+..=||++ +-+..+...+.+ .| +.+|+.|+. ...+=.-..+.++|...|..+..+-|...+.+..
T Consensus 27 ~~i~~K~E~~nptGS~K~--R~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~ 102 (296)
T PRK11761 27 NTILAKLEGNNPAGSVKD--RPALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERR 102 (296)
T ss_pred CEEEEEEcccCCCCCchh--HHHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 356666654456666766 223333333444 45 577777654 4455556667778888998777666666667778
Q ss_pred HHHhhcCCeEEEEcC
Q 045351 125 RQIHLSKPVIAFATH 139 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~ 139 (349)
..++..++++++++.
T Consensus 103 ~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 103 AAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHcCCEEEEeCC
Confidence 889999999999986
No 213
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=47.07 E-value=52 Score=23.37 Aligned_cols=52 Identities=19% Similarity=0.026 Sum_probs=37.2
Q ss_pred eeeHHHHHHH----HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 58 RILYPDLTLR----IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 58 ~~Ty~~l~~~----~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
.+.+.++.+. ...+...+.. .++.+++.|+++|.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556665433 2356666776 78888999999999988777777777888863
No 214
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=47.04 E-value=1.3e+02 Score=26.17 Aligned_cols=94 Identities=17% Similarity=0.091 Sum_probs=58.8
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC----CHHHHHHHHhhcC
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC----TIPEILRQIHLSK 131 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~----~~~~l~~~l~~~~ 131 (349)
+..+-.+-+. |...+|+.|++ .| -.|.+++.+....+.- .+...|..+..++-.. ..+++...++..+
T Consensus 9 ~~~iG~GHv~-Rcl~LA~~l~~-~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~ 80 (279)
T TIGR03590 9 SSEIGLGHVM-RCLTLARALHA-QG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEK 80 (279)
T ss_pred CccccccHHH-HHHHHHHHHHH-CC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcC
Confidence 5666666654 67889999976 44 3566666655554433 3357777776664332 2446888888889
Q ss_pred CeEEEEcCccc-----ccccccCcceEEeCC
Q 045351 132 PVIAFATHDTA-----HKIPQLKYGTVLLDS 157 (349)
Q Consensus 132 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~ 157 (349)
++++++|.-.. ..++....+++++++
T Consensus 81 ~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD 111 (279)
T TIGR03590 81 FDILIVDHYGLDADWEKLIKEFGRKILVIDD 111 (279)
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCeEEEEec
Confidence 99999997422 222223455666664
No 215
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=47.03 E-value=1.5e+02 Score=28.11 Aligned_cols=70 Identities=9% Similarity=-0.037 Sum_probs=46.9
Q ss_pred ceeeHHHHHHHHHHH--------------HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH-HHhcCCeEe---------
Q 045351 57 HRILYPDLTLRIKTL--------------AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS-LFSLGVVVS--------- 112 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~--------------a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v--------- 112 (349)
..-||.+|.+.+.++ |..+....++++||.| .+..++...-| +...|++++
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 566888998887654 3333333789999965 34445555555 788888766
Q ss_pred -----cCCCCCCHHHHHHHHhhcC
Q 045351 113 -----PCNPSCTIPEILRQIHLSK 131 (349)
Q Consensus 113 -----~i~~~~~~~~l~~~l~~~~ 131 (349)
|....++.+.++..+....
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 3345578889999887543
No 216
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=46.92 E-value=2.1e+02 Score=28.79 Aligned_cols=91 Identities=13% Similarity=0.030 Sum_probs=60.7
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCC--CchHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQN--SVRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++-.. +| -.+|+..+...+..... . .++.++|++...+|- ...+...+++.+..|++.+..+
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 5677776432 22 47888888766554432 3 578899999888774 2334456778888999888665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.......+...+++.++..+....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchH
Confidence 444455666777788887776543
No 217
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=46.89 E-value=1.9e+02 Score=28.78 Aligned_cols=93 Identities=16% Similarity=0.105 Sum_probs=67.4
Q ss_pred CCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-CC
Q 045351 186 SDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-GK 261 (349)
Q Consensus 186 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~ 261 (349)
++++++.... +|. ...+|.+.+...+..+...+ + +..+|++...+|..-.+ +...++++..|+..+.. +.
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~G-v~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALG-VRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCC
Confidence 4555554322 222 34689999887776655443 4 78999999999975433 45677899999988777 46
Q ss_pred CCHHHHHHHHHhhcccEEEechH
Q 045351 262 FDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
+.++.+...+++.++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEccc
Confidence 78899999999999999887653
No 218
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=46.66 E-value=64 Score=28.48 Aligned_cols=52 Identities=12% Similarity=0.220 Sum_probs=33.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHH----HHHHHhhcCCeEEEEcC
Q 045351 86 VAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPE----ILRQIHLSKPVIAFATH 139 (349)
Q Consensus 86 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~----l~~~l~~~~~~~i~~~~ 139 (349)
+|.+.+|..+.---...+++.. ..+|..+..+..+ ..++++..++++++.|+
T Consensus 98 Vv~vq~P~~p~~~~~Y~~IL~~--lgaP~~~~~~~~~~~~~~~~llr~~~vrmLIIDE 153 (302)
T PF05621_consen 98 VVYVQMPPEPDERRFYSAILEA--LGAPYRPRDRVAKLEQQVLRLLRRLGVRMLIIDE 153 (302)
T ss_pred EEEEecCCCCChHHHHHHHHHH--hCcccCCCCCHHHHHHHHHHHHHHcCCcEEEeec
Confidence 6777788776655555555443 2334444444443 45788999999999986
No 219
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=46.49 E-value=2.2e+02 Score=28.03 Aligned_cols=95 Identities=20% Similarity=0.141 Sum_probs=68.0
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.+|++.. +..+|. ...+|.+.+...+..+... .+ +.++|++...+|..--. +...++++..|+..+..
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~G-v~~Gd~V~i~~~n~~e~-v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALG-VGRGDRVLIYMPMIAEA-VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecC
Confidence 4566766543 222232 2458999888776664433 34 78999999999975333 45677899999998777
Q ss_pred CCCCHHHHHHHHHhhcccEEEech
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
+.+.+..+...++..++..++...
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECC
Confidence 467889999999999999888754
No 220
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.23 E-value=1.2e+02 Score=29.46 Aligned_cols=96 Identities=16% Similarity=0.094 Sum_probs=70.1
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.+|++.. + -.+|...+...+..+...+ + +..++++....|-...+ +...++++..|+..+..
T Consensus 44 ~~p~~~a~~~~--~-------~~~Ty~ql~~~~~~~A~~L~~~g-i~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l 112 (573)
T PRK05605 44 RFGDRPALDFF--G-------ATTTYAELGKQVRRAAAGLRALG-VRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEH 112 (573)
T ss_pred HCCCCeEEEeC--C-------CcccHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeec
Confidence 34566666541 1 2478888887766654443 4 67889999888865543 35677889999998877
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
. .+.+..+...+.+.++..++........+
T Consensus 113 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 113 NPLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred CcCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 4 67899999999999999999877765544
No 221
>PRK07514 malonyl-CoA synthase; Validated
Probab=46.05 E-value=1.4e+02 Score=28.17 Aligned_cols=86 Identities=16% Similarity=0.103 Sum_probs=64.2
Q ss_pred eeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccE
Q 045351 203 GALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSH 278 (349)
Q Consensus 203 ~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 278 (349)
+..+|...+...+..+...+ + +.+++++....+-.. -.....++++..|+..+..+ .+....+...++..+++.
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g-~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALG-VKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 34688888877666654433 4 678899988888653 33356778999999988775 568889999999999999
Q ss_pred EEechHHHHHHH
Q 045351 279 VVLAPPVVLKMA 290 (349)
Q Consensus 279 l~~~P~~l~~l~ 290 (349)
++..+.....+.
T Consensus 104 ii~~~~~~~~~~ 115 (504)
T PRK07514 104 VVCDPANFAWLS 115 (504)
T ss_pred EEEccchhHHHH
Confidence 988877665543
No 222
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=45.94 E-value=1e+02 Score=21.63 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHhhhcC---------CCCCCEEEEE-cCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHH
Q 045351 61 YPDLTLRIKTLAYSLKTKYK---------LSKYDVAFLL-SQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQI 127 (349)
Q Consensus 61 y~~l~~~~~~~a~~L~~~~g---------~~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l 127 (349)
.++..+|..+....+.+ .| +++-|.|.|+ .|+.....-+.+++...|.+-.=.-+..+.+++..++
T Consensus 15 ~~~~~~R~~a~~~~~e~-~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 15 IKDSPDRAEAVRALIEA-LGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred HhhcHHHHHHHHHHHHH-cCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 34445565666666665 66 3566777777 5555666778888999997655555677888887765
No 223
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=45.81 E-value=1.4e+02 Score=28.78 Aligned_cols=83 Identities=13% Similarity=0.039 Sum_probs=61.6
Q ss_pred eeechhhHHHHHhhhhcccc---CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEE
Q 045351 204 ALLTQRNLVAAVAGGHAVRA---ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (349)
..+|...+...+..+...+. .+.+++++...++-.-.+ ....++++..|+..+... .+....+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 46899998877766554441 267889998888765433 457778889998888774 5678899999999999988
Q ss_pred EechHHHH
Q 045351 280 VLAPPVVL 287 (349)
Q Consensus 280 ~~~P~~l~ 287 (349)
+..+.+..
T Consensus 127 i~~~~~~~ 134 (562)
T PRK12492 127 VYLNMFGK 134 (562)
T ss_pred Eeccccch
Confidence 87665433
No 224
>PRK07638 acyl-CoA synthetase; Validated
Probab=45.68 E-value=1.2e+02 Score=28.62 Aligned_cols=83 Identities=6% Similarity=0.040 Sum_probs=59.1
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
-.+|.+.+...+... ... .++.++|++....+-... ++...+..+..|++.+.. +...++++...+++.++.++
T Consensus 161 v~~s~~~~~~~~~~~---~~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 161 FLRAQQSWLHSFDCN---VHD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEecHHHHHHHHHH---HHh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 467887776554433 334 678899999887664432 355667778899988865 45678889999999999999
Q ss_pred EEcCccccc
Q 045351 136 FATHDTAHK 144 (349)
Q Consensus 136 ~~~~~~~~~ 144 (349)
.........
T Consensus 236 ~~~P~~~~~ 244 (487)
T PRK07638 236 YTVPTMLES 244 (487)
T ss_pred EeCcHHHHH
Confidence 887654433
No 225
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.53 E-value=1.5e+02 Score=28.48 Aligned_cols=82 Identities=12% Similarity=-0.040 Sum_probs=55.3
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
-.+|...+.... .+..+....++.++|++..+.|-... .....++++..|+..+...+....+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 356766654322 23333322688899999877764322 233346778899988877777788999999999999988
Q ss_pred EEcCc
Q 045351 136 FATHD 140 (349)
Q Consensus 136 ~~~~~ 140 (349)
.....
T Consensus 272 ~~~P~ 276 (539)
T PRK07008 272 AGVPT 276 (539)
T ss_pred EechH
Confidence 76554
No 226
>PRK05850 acyl-CoA synthetase; Validated
Probab=45.47 E-value=2.2e+02 Score=27.55 Aligned_cols=105 Identities=16% Similarity=0.047 Sum_probs=70.2
Q ss_pred cCCCCcEEEEecc-CC-CCCCceeeechhhHHHHHhhhhccccC-CCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSS-GT-TGMVKGALLTQRNLVAAVAGGHAVRAA-RSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TS-Gt-TG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++.... +. .|. ...+|...+...+..+...+.. -.+++++...++-.. --+...++++..|+..+..
T Consensus 13 ~~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 13 LQPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGL-EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred cCCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEec
Confidence 3456666654321 11 122 2468999887766665443321 146788888888543 3345788899999999988
Q ss_pred CC----CCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 260 GK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 260 ~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
+. .....+...++..++..++..+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 53 35678889999999999999887766653
No 227
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=45.27 E-value=45 Score=24.33 Aligned_cols=40 Identities=20% Similarity=0.205 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
..+...+.. .++.+++.|+++|..+.....+.+.+..+|.
T Consensus 64 ~~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 355566776 8999999999999988777777777777786
No 228
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=45.11 E-value=79 Score=26.48 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=48.8
Q ss_pred hhHhhHHHHHhhhh-cCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHh------cCCCCCCCCCcchheehc
Q 045351 238 FHSYGFTCCLRSLG-MGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMAR------DGGTMDGYDLSSIEVVAS 309 (349)
Q Consensus 238 ~~~~g~~~~~~~l~-~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~------~~~~~~~~~l~~lr~i~~ 309 (349)
.|..|-..+-..|- .|.-++=. ....++.+.+..++++++.+..+-.+-..+.. .. +..+ ++.=-.+.+
T Consensus 116 vHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L-~eeG--iRd~v~v~v 192 (227)
T COG5012 116 VHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELL-KEEG--IRDKVIVMV 192 (227)
T ss_pred HHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHH-HHcC--CccCeEEee
Confidence 68888844443333 35555555 45678999999999999988766544333322 21 1111 121124567
Q ss_pred cCCCCCHHHHHH
Q 045351 310 GGAHLTLSVIRK 321 (349)
Q Consensus 310 gG~~l~~~~~~~ 321 (349)
||+|++.+.+++
T Consensus 193 GGApvtq~~a~~ 204 (227)
T COG5012 193 GGAPVTQDWADK 204 (227)
T ss_pred cCccccHHHHHH
Confidence 999999765544
No 229
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=45.09 E-value=1.2e+02 Score=29.21 Aligned_cols=95 Identities=16% Similarity=0.078 Sum_probs=68.6
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc----ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV----RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
..++.++++.. | ..+|...+......+... .+ +.+++++...+|-...+ +...++++..|+..+.
T Consensus 37 ~~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g-~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~ 105 (560)
T PRK08751 37 KFADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQ-LKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVN 105 (560)
T ss_pred hCCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEec
Confidence 34667776531 2 257888888776665543 34 68889998888765433 3567888999999987
Q ss_pred c-CCCCHHHHHHHHHhhcccEEEechHHHHH
Q 045351 259 M-GKFDFGRMLKAVEEFRVSHVVLAPPVVLK 288 (349)
Q Consensus 259 ~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 288 (349)
. +.+.+..+...+.+.+++.++........
T Consensus 106 l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 106 VNPLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred cCccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 7 45688899999999999998887665543
No 230
>PRK10595 SOS cell division inhibitor; Provisional
Probab=45.03 E-value=79 Score=25.11 Aligned_cols=65 Identities=14% Similarity=-0.028 Sum_probs=43.5
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C-CCCHHHHHH---HHhhcCCeEEEE
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P-SCTIPEILR---QIHLSKPVIAFA 137 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~-~~~~~~l~~---~l~~~~~~~i~~ 137 (349)
+.+|.+ .|+..+..+.|...+..+.+-++-=|++.|..-+.+. + ..+.+++++ .-+..+.-.++.
T Consensus 70 ~~~L~~-~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQA-SGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHH-cCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 566777 8998888777777777888888888888887544443 3 566555444 345555545444
No 231
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=44.62 E-value=2e+02 Score=25.43 Aligned_cols=60 Identities=8% Similarity=-0.028 Sum_probs=46.8
Q ss_pred cC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 79 YK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 79 ~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.| +++|++ .|-...+---+.+.+.|...|..++.+-|..-..+-+.+|+..++.+++++.
T Consensus 56 ~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 35 899984 4454555566777777778899888887777777789999999999999987
No 232
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=44.38 E-value=2.2e+02 Score=25.04 Aligned_cols=92 Identities=8% Similarity=-0.085 Sum_probs=57.1
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEI 123 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l 123 (349)
+.++.+-.+..+..-|+++=-. ...+...++ .| +.+|++| +....+-.-..+-+++.+.|..+..+-|...++..
T Consensus 20 g~~i~~K~E~~nptGS~K~R~a-~~~l~~a~~--~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k 95 (298)
T TIGR01139 20 NANVFVKLEGRNPSGSVKDRIA-LNMIWDAEK--RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIER 95 (298)
T ss_pred CceEEEEEcccCCCCcchHHHH-HHHHHHHHH--cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHH
Confidence 3355555553344445554222 223333333 35 4777776 45555556666667778899877666666555566
Q ss_pred HHHHhhcCCeEEEEcCc
Q 045351 124 LRQIHLSKPVIAFATHD 140 (349)
Q Consensus 124 ~~~l~~~~~~~i~~~~~ 140 (349)
...++..++++++++..
T Consensus 96 ~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 96 RKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHcCCEEEEECCC
Confidence 88899999999999864
No 233
>PRK09088 acyl-CoA synthetase; Validated
Probab=44.24 E-value=2e+02 Score=27.01 Aligned_cols=92 Identities=13% Similarity=0.011 Sum_probs=64.7
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.++++....| ..+|...+...+..+... .+ +..++++...++-...+ +...++++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g-~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRG-CVDGERLAVLARNSVWL-VALHFACARVGAIYVPLN 78 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeC
Confidence 4555555433223 357889887766554433 34 67889998888865544 346788899999888775
Q ss_pred -CCCHHHHHHHHHhhcccEEEechH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
...+..+...+++.+++.++....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~ 103 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDA 103 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcch
Confidence 568888999999999998877653
No 234
>PRK13383 acyl-CoA synthetase; Provisional
Probab=44.16 E-value=1.5e+02 Score=28.23 Aligned_cols=84 Identities=17% Similarity=0.084 Sum_probs=62.8
Q ss_pred eechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+...+ + +.+++++...++-.-. .+...++.+..|+..+..+ .+..+.+...+++.++..++
T Consensus 60 ~lTy~el~~~~~~la~~L~~~g-i~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDG-VAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 478888877666654443 4 6788998888875432 2356778889999998885 56889999999999999999
Q ss_pred echHHHHHHH
Q 045351 281 LAPPVVLKMA 290 (349)
Q Consensus 281 ~~P~~l~~l~ 290 (349)
..+...+.+.
T Consensus 138 ~~~~~~~~~~ 147 (516)
T PRK13383 138 ADNEFAERIA 147 (516)
T ss_pred EchhHHHHHH
Confidence 8887766543
No 235
>PRK08162 acyl-CoA synthetase; Validated
Probab=44.06 E-value=1.2e+02 Score=29.18 Aligned_cols=83 Identities=10% Similarity=0.014 Sum_probs=64.6
Q ss_pred eechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+...+ + +..++++....|-...+ +...++.+..|+..+..+ .+....+...++..+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g-~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRG-IGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 589998887776655443 4 67899998888875544 356778899999888774 56889999999999999999
Q ss_pred echHHHHHH
Q 045351 281 LAPPVVLKM 289 (349)
Q Consensus 281 ~~P~~l~~l 289 (349)
..+.....+
T Consensus 121 ~~~~~~~~~ 129 (545)
T PRK08162 121 VDTEFAEVA 129 (545)
T ss_pred EccchhhHH
Confidence 888766554
No 236
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=43.65 E-value=1.8e+02 Score=26.63 Aligned_cols=91 Identities=10% Similarity=-0.058 Sum_probs=59.4
Q ss_pred CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHH
Q 045351 47 TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQ 126 (349)
Q Consensus 47 ~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 126 (349)
++.+-.+..+-.-|+++=-. ...+....++ --+.+|...++....+-.-+.+.++|...|..+..+-|.....+....
T Consensus 75 ~I~~KlE~~nPtGS~KdR~A-~~~l~~a~~~-G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 152 (368)
T PLN02556 75 YIAAKQEMFQPTSSIKDRPA-LAMIEDAEKK-NLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVT 152 (368)
T ss_pred EEEEEecccCCccchHHHHH-HHHHHHHHHc-CCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 44444433233335554221 2233333443 347788655556667777777888889999987777777777777899
Q ss_pred HhhcCCeEEEEcC
Q 045351 127 IHLSKPVIAFATH 139 (349)
Q Consensus 127 l~~~~~~~i~~~~ 139 (349)
++..++++++++.
T Consensus 153 lr~~GA~Vi~~~~ 165 (368)
T PLN02556 153 MRAFGAELVLTDP 165 (368)
T ss_pred HHHcCCEEEEECC
Confidence 9999999999974
No 237
>PRK13391 acyl-CoA synthetase; Provisional
Probab=43.42 E-value=2.6e+02 Score=26.50 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=69.3
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG- 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 260 (349)
.++.++++...+| ..+|.+.+...+..+...+. .+.+++++....+-...+ +...+..+..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 4566666654433 24888888776665444332 157788888887765443 456778999999988875
Q ss_pred CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 261 KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
......+...+++.++..++..+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 56889999999999999998887665443
No 238
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.65 E-value=1.7e+02 Score=27.57 Aligned_cols=83 Identities=10% Similarity=0.031 Sum_probs=61.6
Q ss_pred eechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+... .+ +..++++....+-.... +..++.++..|+..+..+ .+....+...+++.+++.++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g-~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALG-LREGDVVAILLENNPEF-FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEeCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 47777776655554433 34 67889998888865433 456888999999988875 56788888999999999998
Q ss_pred echHHHHHH
Q 045351 281 LAPPVVLKM 289 (349)
Q Consensus 281 ~~P~~l~~l 289 (349)
..+.....+
T Consensus 89 ~~~~~~~~~ 97 (502)
T PRK08276 89 VSAALADTA 97 (502)
T ss_pred EccchhhHH
Confidence 887666554
No 239
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=42.52 E-value=2.7e+02 Score=26.53 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=63.2
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH---HHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV---LYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~i 114 (349)
++++|++-.. +| -.+|...+...+... ... .++.++|++...+|....+-. ..++++..|++.+..
T Consensus 182 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~---~~~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 182 SDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRS---VEI-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCccEEEEeCCCCCCCCceeeeehHHHHHHHHHH---Hhh-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 6677776432 22 468888876655443 334 678899999888875543322 357778889887764
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 115 NPSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 115 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
+ ...+..+...+++.++.++.......
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~ 284 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAV 284 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHH
Confidence 4 45677788889999999988876543
No 240
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=42.23 E-value=62 Score=24.68 Aligned_cols=54 Identities=20% Similarity=0.070 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcC--CCchHHHHHHHHHhcCCeEecC
Q 045351 61 YPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQ--NSVRVPVLYLSLFSLGVVVSPC 114 (349)
Q Consensus 61 y~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~i 114 (349)
...-...-.-++..+.+.+.+++||.+.++.. |++..+-+...+...|+.++-|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 81 ISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 33344444556666665467899999888864 7788888899999999887754
No 241
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=41.21 E-value=1.7e+02 Score=32.05 Aligned_cols=99 Identities=10% Similarity=-0.018 Sum_probs=68.2
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..|+.+|++...+...+......+|.+.+...+..+...+ + ..+++++...++-...+ +..+++++..|+..+.+
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~g-v~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTG-IKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEecc
Confidence 4577777764332111111234689999987776655443 4 67899999888866444 45788999999999888
Q ss_pred C-CCCHHHHHHHHHhhcccEEEech
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
+ .+.+.++...++..++..++...
T Consensus 326 dp~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 326 DPAYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEec
Confidence 5 45677888888888888777643
No 242
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=41.00 E-value=18 Score=35.32 Aligned_cols=31 Identities=26% Similarity=0.168 Sum_probs=25.7
Q ss_pred cCCCCcEEEEeccCCCC-CCceeeechhhHHH
Q 045351 183 VSLSDPAAILYSSGTTG-MVKGALLTQRNLVA 213 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG-~pK~v~~t~~~l~~ 213 (349)
..++.+.+...|||||| .+|-|..|++.+-.
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 34567778999999997 59999999997765
No 243
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=40.67 E-value=2.9e+02 Score=27.09 Aligned_cols=95 Identities=20% Similarity=0.132 Sum_probs=67.3
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.+|++. .+..+|. ...+|.+.+...+..+... .+ +.++|++...+|..-.. +...++++..|+..+..
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLG-VQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeC
Confidence 456777654 3222222 3467999888766554433 34 68899999999864433 35677889999998777
Q ss_pred CCCCHHHHHHHHHhhcccEEEech
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
+.+.+..+...++..++..++...
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 467889999999999999888754
No 244
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=39.68 E-value=2.3e+02 Score=28.16 Aligned_cols=87 Identities=8% Similarity=-0.049 Sum_probs=65.6
Q ss_pred eeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 204 ALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
..+|.+.+...+..+...+. ++.++|++...++-...+ +...++++..|+..|-.. .+.++.+...+++.+++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45899988877766554432 268899998888865443 346778999999988774 67889999999999999999
Q ss_pred echHHHHHHHh
Q 045351 281 LAPPVVLKMAR 291 (349)
Q Consensus 281 ~~P~~l~~l~~ 291 (349)
.....+..+..
T Consensus 155 ~~~~~~~~~~~ 165 (660)
T PLN02861 155 VQESKISSILS 165 (660)
T ss_pred ECHHHHHHHHH
Confidence 87776665543
No 245
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=39.56 E-value=26 Score=21.13 Aligned_cols=24 Identities=21% Similarity=0.061 Sum_probs=20.5
Q ss_pred heehccCCCCCHHHHHHHHHHcCC
Q 045351 305 EVVASGGAHLTLSVIRKYLQLNRT 328 (349)
Q Consensus 305 r~i~~gG~~l~~~~~~~~~~~~~~ 328 (349)
+.+-++|.||+.+....++..|+.
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~ 45 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGK 45 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhh
Confidence 568899999999999999888753
No 246
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=39.54 E-value=52 Score=29.42 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=41.2
Q ss_pred eeeHHHHHHH------HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 58 RILYPDLTLR------IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 58 ~~Ty~~l~~~------~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
.+.|.++.+. ...+...+.+ .|+.+++.|.++|..+......++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~-~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQ-EGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4666665432 4567777887 89999999999999998888888998889864
No 247
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=39.08 E-value=1.5e+02 Score=28.02 Aligned_cols=58 Identities=14% Similarity=0.163 Sum_probs=44.2
Q ss_pred CCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC----CCCHHHHHHHHHhhcccEEEechHHH
Q 045351 225 RSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG----KFDFGRMLKAVEEFRVSHVVLAPPVV 286 (349)
Q Consensus 225 ~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~l~~~P~~l 286 (349)
..++|++++--|-|+..-- ..-..|..++-.+ +.+++.+-+.++++++..++++|++-
T Consensus 176 ~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~q 237 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQ 237 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCC
Confidence 3689999999998775422 3344577766652 56999999999999999999999653
No 248
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.77 E-value=2.2e+02 Score=23.34 Aligned_cols=84 Identities=15% Similarity=0.095 Sum_probs=54.6
Q ss_pred CceeeHHHHHHHHHHHHHHHhh---h---cCCCCCCEEEEEcCCCchH----HHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 56 RHRILYPDLTLRIKTLAYSLKT---K---YKLSKYDVAFLLSQNSVRV----PVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~---~---~g~~~gd~V~i~~~n~~~~----~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
...++..|.+-.+..+-..+.. . .....+.+|++.+..+..+ .+....+-..|.-++-+..+.+.+++..
T Consensus 48 ~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~ 127 (201)
T cd02070 48 EGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVE 127 (201)
T ss_pred cCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 3567777766655544433321 0 1222244666666554332 2333344568999999999999999999
Q ss_pred HHhhcCCeEEEEcC
Q 045351 126 QIHLSKPVIAFATH 139 (349)
Q Consensus 126 ~l~~~~~~~i~~~~ 139 (349)
.+++.+|++|..+.
T Consensus 128 ~~~~~~~d~v~lS~ 141 (201)
T cd02070 128 AVKEHKPDILGLSA 141 (201)
T ss_pred HHHHcCCCEEEEec
Confidence 99999999988765
No 249
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=38.71 E-value=41 Score=24.92 Aligned_cols=56 Identities=13% Similarity=0.091 Sum_probs=43.8
Q ss_pred eeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH--HHHHhc-CCeEecC
Q 045351 59 ILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY--LSLFSL-GVVVSPC 114 (349)
Q Consensus 59 ~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~--lA~~~~-G~~~v~i 114 (349)
=|-.++.+.+..+-..+.++.++.+.|.|.+...-..+.-.++ .|+-.. |+..+|+
T Consensus 13 nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~Gw~~Vpl 71 (117)
T TIGR01796 13 NEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPAAAARGLPGWTDVPV 71 (117)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHHHHhccCCCCcce
Confidence 3567899999999988877689999999998877665544444 677777 8888877
No 250
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=38.30 E-value=56 Score=28.49 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=41.7
Q ss_pred eeeHHHHHH-----HHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 58 RILYPDLTL-----RIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 58 ~~Ty~~l~~-----~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
.+.|.++.+ ....+...|.+ .|+.+++.|.++|.++...-.+++++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 566777653 24566677777 89999999999999999999999999888874
No 251
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=37.83 E-value=2.3e+02 Score=26.31 Aligned_cols=59 Identities=17% Similarity=0.009 Sum_probs=47.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecC--CCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPC--NPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i--~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
==+|-+|+.+.+-..+..+.+..+..+|+-+... ||..+++++...|...+..+.-...
T Consensus 29 pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~ 89 (406)
T TIGR00936 29 PLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRG 89 (406)
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecC
Confidence 3468899999999999999999999999976655 7888888888888877777655443
No 252
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=37.37 E-value=98 Score=25.24 Aligned_cols=50 Identities=14% Similarity=0.077 Sum_probs=31.8
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
.-+||.++.+++.++|..+.+++ .....|.+...++-..+...++ -.+|.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~~--~~~~~vivgi~~Gg~~fa~~L~-~~L~~ 59 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASDY--AGKSPVVLGVATGAFMFLADLV-RAIQP 59 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHHc--CCCCcEEEEEccCCHHHHHHHH-HHhCc
Confidence 46999999999999999998832 2122344444455444444444 33443
No 253
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=37.30 E-value=2.7e+02 Score=25.85 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=54.9
Q ss_pred CCCCCEEEEEcCCCchHHH-----HH----HHHHhcCCeEecCC---CCCCHHHHHHHHhhcCCeEEEEcCccccccccc
Q 045351 81 LSKYDVAFLLSQNSVRVPV-----LY----LSLFSLGVVVSPCN---PSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL 148 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~-----~~----lA~~~~G~~~v~i~---~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 148 (349)
+++||+|..+....=.++. -. ..-.....+..+++ -....++++.++++.+|++|++.........+.
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 4688888777544322221 11 02222334556666 345788999999999999999987543322210
Q ss_pred ---------CcceEEeCCCCccccccccCCCCCCCCccccccccCCCCcEEEEeccCCC--CCCceeeech
Q 045351 149 ---------KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTT--GMVKGALLTQ 208 (349)
Q Consensus 149 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT--G~pK~v~~t~ 208 (349)
.--+++.|......+.....- .. +...-| ++..|.--| |..+|++++.
T Consensus 187 ~~~reIad~vga~l~~D~sH~~GLIa~g~~------~~----P~~~AD--vvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 187 KRFREIADEVGAYLMADISHIAGLIAGGLF------PN----PFPYAD--VVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp HHHHHHHHHTT-EEEEE-TTTHHHHHTTSS------------GCCTSS--EEEEESSGGG-SSS-EEEEES
T ss_pred HHHHHHHHhcCcEEEecccccccceehhee------cC----ccccce--EEEeeccccccccCceEEEEc
Confidence 112556666666666654311 11 111112 344444334 6778888888
No 254
>PLN02614 long-chain acyl-CoA synthetase
Probab=37.23 E-value=4.3e+02 Score=26.32 Aligned_cols=105 Identities=11% Similarity=-0.034 Sum_probs=72.6
Q ss_pred cCCCCcEEEEec--cCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEE
Q 045351 183 VSLSDPAAILYS--SGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 183 ~~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v 257 (349)
..++.++++... .|..|. -..+|...+...+..+... .+ +.+++++...++-..-+ +...++++..|+..|
T Consensus 57 ~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~G-v~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~v 132 (666)
T PLN02614 57 KYPNNPMLGRREIVDGKPGK--YVWQTYQEVYDIVIKLGNSLRSVG-VKDEAKCGIYGANSPEW-IISMEACNAHGLYCV 132 (666)
T ss_pred hCCCCCeEEEecccCCCCCC--cEEeEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEE
Confidence 356777765321 121121 2346888887766664443 34 68899998888865433 346778899999988
Q ss_pred EcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHh
Q 045351 258 CMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMAR 291 (349)
Q Consensus 258 ~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 291 (349)
-.. .+.+..+...++..++..++.....+..+..
T Consensus 133 pl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 167 (666)
T PLN02614 133 PLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFK 167 (666)
T ss_pred EecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 774 6788999999999999999988776665543
No 255
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.95 E-value=2.9e+02 Score=29.44 Aligned_cols=94 Identities=16% Similarity=0.096 Sum_probs=65.3
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|.+-.. +| -.+|...+...+..... . .++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 781 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 781 PDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---V-FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---h-cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 6777776432 22 46888888766554433 3 5678899888776632 233344677788898888776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
...+.+.+...+++.++..+.......
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~ 883 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFL 883 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHH
Confidence 667788899999999999988865443
No 256
>PLN02479 acetate-CoA ligase
Probab=36.83 E-value=4e+02 Score=25.75 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=68.5
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
..++.++++. +. ..+|...+...+..+...+. ++.+++++....+-.-.+ +...++++..|+..+..+
T Consensus 32 ~~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 32 VHPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM-YEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred hCCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH-HHHHHHHHhCCcEEEEec
Confidence 3566666653 21 25788888777766554442 268899998888864433 356778899999888875
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVL 287 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (349)
.+....+...+++.++..++..+..+.
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 129 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFFT 129 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhhh
Confidence 568899999999999999998776643
No 257
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=36.80 E-value=2.6e+02 Score=27.66 Aligned_cols=99 Identities=14% Similarity=0.088 Sum_probs=70.4
Q ss_pred CCCCCCCeEEEeCCC-------CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH-HHHHhcCCeEe
Q 045351 41 HAPPPDTTALIDTAS-------RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY-LSLFSLGVVVS 112 (349)
Q Consensus 41 ~~~~~~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~-lA~~~~G~~~v 112 (349)
... +|.+|.+-... |.-+||..+...+..+...+. -++++|+++-++|-+.-+=-++ .++...|.+.+
T Consensus 187 ~~~-~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~ 262 (613)
T COG1022 187 PPK-PDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV 262 (613)
T ss_pred CCC-ccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE
Confidence 445 78888764322 357999999999887777665 2789999999999664444443 55555555544
Q ss_pred cCCCCCCHHHHHHHHhhcCCeEEEEcCcccccc
Q 045351 113 PCNPSCTIPEILRQIHLSKPVIAFATHDTAHKI 145 (349)
Q Consensus 113 ~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 145 (349)
.. ..+...+..-++..+|.+++.-....+++
T Consensus 263 ~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i 293 (613)
T COG1022 263 LF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKV 293 (613)
T ss_pred Ee--cCCHHHHHHHHHHhCCeEEeechHHHHHH
Confidence 44 44778899999999999999877654443
No 258
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=36.77 E-value=1.1e+02 Score=27.69 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=44.5
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
|+. .+++||++|+|..--+.-+....+|-. .|+.++.++.. ++-....++.+++.++...
T Consensus 159 lk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKK-ANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhh-cCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 565 789999999999887888888888876 45888877643 3334455667888887643
No 259
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=36.46 E-value=2.2e+02 Score=27.37 Aligned_cols=73 Identities=12% Similarity=0.029 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhc---CCeEEEEcC
Q 045351 66 LRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLS---KPVIAFATH 139 (349)
Q Consensus 66 ~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~---~~~~i~~~~ 139 (349)
++.+++-..|.. +.=.++.+|.|++..-..-=-+.-..-+.|..++.|..+.++++-...|+.. +..++++.+
T Consensus 324 ~K~~~l~~lL~~-~~~~~~~KvIIFc~tkr~~~~l~~~l~~~~~~a~~iHGd~sQ~eR~~~L~~FreG~~~vLVATd 399 (519)
T KOG0331|consen 324 AKLRKLGKLLED-ISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGDKSQSERDWVLKGFREGKSPVLVATD 399 (519)
T ss_pred HHHHHHHHHHHH-HhccCCCcEEEEecchhhHHHHHHHHHhcCcceeeecccccHHHHHHHHHhcccCCcceEEEcc
Confidence 334455555555 3334566788888766666666666666678888999999999888888754 555666654
No 260
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=36.03 E-value=37 Score=22.49 Aligned_cols=18 Identities=11% Similarity=-0.049 Sum_probs=14.0
Q ss_pred HHHHhhhcCCCCCCEEEEE
Q 045351 72 AYSLKTKYKLSKYDVAFLL 90 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~ 90 (349)
-..|++ .|+++||.|-|.
T Consensus 46 ~~~L~~-~G~~~GD~V~Ig 63 (69)
T TIGR03595 46 EDALRK-AGAKDGDTVRIG 63 (69)
T ss_pred HHHHHH-cCCCCCCEEEEc
Confidence 344676 799999999875
No 261
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=35.90 E-value=3.3e+02 Score=25.16 Aligned_cols=56 Identities=13% Similarity=0.242 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC-TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|..+....+-++-+..- +|..++.+.... ..+.....++.......+.++
T Consensus 275 ~Gkrv~i~g~~~~~~~la~~L~e-lGm~vv~~~t~~~~~~~~~~~~~~l~~~~~v~~~ 331 (396)
T cd01979 275 RGKSIFFMGDNLLEIPLARFLTR-CGMIVVEVGTPYLDKRFQAAELELLPPMVRIVEK 331 (396)
T ss_pred cCCEEEEECCchHHHHHHHHHHH-CCCEEEeeCCCcCChHHHHHHHHhcCCCCeEEEC
Confidence 58899999886655555544444 999998886544 333334444444445555554
No 262
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=35.86 E-value=1.6e+02 Score=28.56 Aligned_cols=74 Identities=11% Similarity=-0.005 Sum_probs=58.2
Q ss_pred HHHHHHHHH-HHhhhcCCCCCCEEEEEcC--CCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 65 TLRIKTLAY-SLKTKYKLSKYDVAFLLSQ--NSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 65 ~~~~~~~a~-~L~~~~g~~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+.+..+.|. .... .|+++.|+|-+.+| .+...++-+-+|+..|++++ |....|......-+.+.++.++-+-.+
T Consensus 264 h~r~~~~a~g~~~~-~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIGE 340 (649)
T KOG1179|consen 264 HLRYLQGAAGFYYV-FGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIGE 340 (649)
T ss_pred HHHHHHHHHHHHHH-hCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHHH
Confidence 345555666 4444 89999999999998 67888899999999998888 678888888888888888877765443
No 263
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=35.28 E-value=4.1e+02 Score=25.43 Aligned_cols=89 Identities=10% Similarity=-0.018 Sum_probs=59.6
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++... +| -.+|++.+...+.. .... .++.++|++....+-... ++..+++.+..|+..+...
T Consensus 186 ~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~---~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 186 GDELAAVLFTSGTEGLPKGVMLTHNNILASERA---YCAR-LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH---HHHh-cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 5666666432 22 35778777655432 3334 688999999887774433 3456777788898888765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
..+.+.+...+++.++.+++..
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~ 283 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGA 283 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEecc
Confidence 4567778888888888887753
No 264
>PRK05852 acyl-CoA synthetase; Validated
Probab=35.27 E-value=2.8e+02 Score=26.49 Aligned_cols=90 Identities=10% Similarity=-0.025 Sum_probs=62.8
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG- 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 260 (349)
.++..+++... + ...+|...+......+...+. ++.+++++...+|-.- ..+...++++..|+..+..+
T Consensus 29 ~p~~~ai~~~~-~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 100 (534)
T PRK05852 29 LPEAPALVVTA-D------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA-EFVVALLAASRADLVVVPLDP 100 (534)
T ss_pred CCCCcEEEecC-C------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH-HHHHHHHHHHHcCcEEeecCC
Confidence 45666665421 1 135788888776655444332 2678899988877543 33467788999999988775
Q ss_pred CCCHHHHHHHHHhhcccEEEe
Q 045351 261 KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~ 281 (349)
.+.+..+...++..++..++.
T Consensus 101 ~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 101 ALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCcHHHHHHHHhCCCCEEEE
Confidence 567888999999999998874
No 265
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=35.21 E-value=1.9e+02 Score=27.02 Aligned_cols=56 Identities=9% Similarity=-0.014 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHH----HHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPE----ILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~----l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|.++....+-++-+-. .+|..++.+......++ ++..+.....+.++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 5778888887544333333333 67887655554444333 33334555566666554
No 266
>PLN00011 cysteine synthase
Probab=34.93 E-value=3.3e+02 Score=24.29 Aligned_cols=91 Identities=9% Similarity=-0.139 Sum_probs=57.5
Q ss_pred CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCC-CEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 47 TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKY-DVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 47 ~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
++.+-.+..+..=|+++= .....+...+.+ -.+.+| +.|+ ....+-.-..+.++|..+|..+..+-|...++....
T Consensus 33 ~i~~K~E~~nPtGS~K~R-~a~~~l~~a~~~-g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 109 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKDR-IAYSMIKDAEDK-GLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRI 109 (323)
T ss_pred eEEEEecccCCccccchH-HHHHHHHHHHHc-CCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHH
Confidence 455544433344444431 222223344443 347788 5554 466666777777888889997766666666677788
Q ss_pred HHhhcCCeEEEEcCc
Q 045351 126 QIHLSKPVIAFATHD 140 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~ 140 (349)
.++..++++++++..
T Consensus 110 ~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 110 ILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCEEEEECCC
Confidence 999999999998854
No 267
>PRK07867 acyl-CoA synthetase; Validated
Probab=34.74 E-value=2.5e+02 Score=26.94 Aligned_cols=83 Identities=11% Similarity=-0.067 Sum_probs=61.2
Q ss_pred eechhhHHHHHhhhhcccc---CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVRA---ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+...+. ...+++++...++-.- ..+...++++..|+.++..+ ...++.+...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 5888888877766554443 1456788877777433 33356778999999998774 56889999999999999999
Q ss_pred echHHHHH
Q 045351 281 LAPPVVLK 288 (349)
Q Consensus 281 ~~P~~l~~ 288 (349)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766653
No 268
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=34.68 E-value=41 Score=22.29 Aligned_cols=20 Identities=10% Similarity=-0.009 Sum_probs=12.2
Q ss_pred HHHHHHhhhcCCCCCCEEEEE
Q 045351 70 TLAYSLKTKYKLSKYDVAFLL 90 (349)
Q Consensus 70 ~~a~~L~~~~g~~~gd~V~i~ 90 (349)
-+-..|++ .|+++||.|.|.
T Consensus 44 Gv~~~L~~-~G~~~GD~V~Ig 63 (69)
T PF09269_consen 44 GVEKALRK-AGAKEGDTVRIG 63 (69)
T ss_dssp THHHHHHT-TT--TT-EEEET
T ss_pred CHHHHHHH-cCCCCCCEEEEc
Confidence 34456777 899999999863
No 269
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=34.52 E-value=3.5e+02 Score=25.26 Aligned_cols=57 Identities=11% Similarity=-0.049 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC-TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~l~~~~~~~i~~~~ 139 (349)
-.|.+|++..+.+..+.++. .+..+|..++.+.... ..+.....++......+++++
T Consensus 298 L~Gkrv~i~~g~~~~~~~~~-~l~elGmevv~~g~~~~~~~~~~~~~~~~~~~~~i~~~ 355 (421)
T cd01976 298 LEGKTVMLYVGGLRPRHYIG-AYEDLGMEVVGTGYEFAHRDDYERTEVIPKEGTLLYDD 355 (421)
T ss_pred cCCCEEEEECCCCcHHHHHH-HHHHCCCEEEEEEeecCCHHHHhhHHhhcCCceEEEcC
Confidence 47889999987665444443 4457999988765432 234444444444444454444
No 270
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.49 E-value=1.3e+02 Score=26.92 Aligned_cols=64 Identities=11% Similarity=0.033 Sum_probs=49.4
Q ss_pred HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 74 SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
.|++ .|+.+|++|+|..--+.-++...+|.. .|..+..|+... ..-+..++..+++..+...+.
T Consensus 173 pLk~-~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d 236 (360)
T KOG0023|consen 173 PLKR-SGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSS--KKKEEAIKSLGADVFVDSTED 236 (360)
T ss_pred hhHH-cCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCc--hhHHHHHHhcCcceeEEecCC
Confidence 4666 899999999999988888888888876 678888887644 233567777888887765543
No 271
>PLN02409 serine--glyoxylate aminotransaminase
Probab=34.24 E-value=2.2e+02 Score=26.20 Aligned_cols=9 Identities=22% Similarity=0.028 Sum_probs=4.1
Q ss_pred CCCCEEEEE
Q 045351 82 SKYDVAFLL 90 (349)
Q Consensus 82 ~~gd~V~i~ 90 (349)
++||.|++.
T Consensus 82 ~~Gd~Vlv~ 90 (401)
T PLN02409 82 SPGDKVVSF 90 (401)
T ss_pred CCCCEEEEe
Confidence 344444444
No 272
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=34.09 E-value=2.3e+02 Score=22.20 Aligned_cols=86 Identities=13% Similarity=0.058 Sum_probs=50.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCce-eeH--HHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH-
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHR-ILY--PDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS- 103 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~-~Ty--~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA- 103 (349)
.|+.-.|...+ ... +.++.++|.+.... +.+ ..- .....+...+.+ .....-|.|.+.+|.+..-.....+
T Consensus 14 Tt~a~~LA~~l--a~~-g~~vllvD~D~q~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~yD~VIiD~pp~~~~~~~~~~~ 88 (169)
T cd02037 14 STVAVNLALAL--AKL-GYKVGLLDADIYGPSIPKMWRGP-MKMGAIKQFLTD-VDWGELDYLVIDMPPGTGDEHLTLAQ 88 (169)
T ss_pred hHHHHHHHHHH--HHc-CCcEEEEeCCCCCCCchHHHhCc-chHHHHHHHHHH-hhcCCCCEEEEeCCCCCcHHHHHHHh
Confidence 56677777777 667 88999999754332 222 110 112233334443 3335778999999988654333222
Q ss_pred HHhcCCeEecCCCCC
Q 045351 104 LFSLGVVVSPCNPSC 118 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~ 118 (349)
+..+..+++++.|..
T Consensus 89 ~~~ad~viiV~~p~~ 103 (169)
T cd02037 89 SLPIDGAVIVTTPQE 103 (169)
T ss_pred ccCCCeEEEEECCch
Confidence 245677777776654
No 273
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=33.84 E-value=1.4e+02 Score=24.12 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=30.2
Q ss_pred eeeHHHHHHHHHHHHHHHhhhcCCCCC-CEEEEEcCCCchHHHHHHHH
Q 045351 58 RILYPDLTLRIKTLAYSLKTKYKLSKY-DVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a~~L~~~~g~~~g-d~V~i~~~n~~~~~~~~lA~ 104 (349)
-+|.+|+.+++.++|..+.+++. ..| +.|.+..-++-..+...|+-
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~-~~~~~~vvvgI~~Gg~~fa~~L~~ 54 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYK-DSGSDMVLVGLLRGSFMFMADLCR 54 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhc-ccCCCeEEEEEecCChHHHHHHHH
Confidence 48999999999999999987332 223 34555555555554444443
No 274
>PRK05939 hypothetical protein; Provisional
Probab=33.74 E-value=2.2e+02 Score=26.30 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++.-+.-......+-++-+.|+.+..++.. ..++++..+.. +.++|+++.
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ves 139 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVET 139 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEEC
Confidence 5778887664332122222233445677777766543 45666666643 566666643
No 275
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=33.70 E-value=3.3e+02 Score=23.86 Aligned_cols=92 Identities=11% Similarity=-0.049 Sum_probs=57.6
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+.++.+-.+..+..=||++ +.....+.....+ ..+.+|+.|+- ...+-.-..+.++|.+.|..+..+-|...+....
T Consensus 22 g~~i~~K~E~~nptGS~K~-R~a~~~v~~a~~~-g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~ 98 (290)
T TIGR01138 22 GSEVWLKLEGNNPAGSVKD-RPALSMIVEAEKR-GEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERK 98 (290)
T ss_pred CCeEEEEEccCCCCccHHH-HHHHHHHHHHHHc-CCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHH
Confidence 3455555553344444443 1122233333443 33477776654 5556666777778888998777776666666677
Q ss_pred HHHhhcCCeEEEEcC
Q 045351 125 RQIHLSKPVIAFATH 139 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~ 139 (349)
..++..++++++++.
T Consensus 99 ~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 99 AAMRAYGAELILVTK 113 (290)
T ss_pred HHHHHcCCEEEEeCC
Confidence 889999999999875
No 276
>PRK13390 acyl-CoA synthetase; Provisional
Probab=33.61 E-value=4.1e+02 Score=25.00 Aligned_cols=93 Identities=16% Similarity=0.072 Sum_probs=65.1
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG- 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~- 260 (349)
.++.++++... +| ..+|...+...+..+...+. .+.+++++....+-...+ +...++.+..|+..+...
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 45666654422 22 35899998877766554432 267889988888865544 456788999999888774
Q ss_pred CCCHHHHHHHHHhhcccEEEechH
Q 045351 261 KFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
.+.+..+...++..+++.++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 567888888888888888876553
No 277
>PRK11121 nrdG anaerobic ribonucleotide reductase-activating protein; Provisional
Probab=33.60 E-value=41 Score=26.38 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=18.0
Q ss_pred eehccCCCCCH---H----HHHHHHHHcCCccccccccc
Q 045351 306 VVASGGAHLTL---S----VIRKYLQLNRTVNRQLCLEF 337 (349)
Q Consensus 306 ~i~~gG~~l~~---~----~~~~~~~~~~~~~~~~~~~~ 337 (349)
..++||||+-+ + +.+++++.++...++.+|.|
T Consensus 69 vt~sGGEPl~~~~~~~l~~l~~~~k~~~~~~~i~~~tGy 107 (154)
T PRK11121 69 LSLSGGDPLHPQNVPDILKLVQRVKAECPGKDIWVWTGY 107 (154)
T ss_pred EEEECCCccchhhHHHHHHHHHHHHHHCCCCCEEEecCC
Confidence 56789999953 2 22344445555455545544
No 278
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=33.54 E-value=3.5e+02 Score=25.60 Aligned_cols=57 Identities=9% Similarity=-0.073 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC-TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|+.+....+-++-+..--+|..++.+.... ..+.++.+++......+++++
T Consensus 324 ~GkrvaI~~~~~~~~~l~~~l~~ElGmevv~~~~~~~~~~~~~~~~~~~~~~~~~i~d 381 (457)
T TIGR01284 324 RGKKVWVWSGGPKLWHWPRPLEDELGMEVVAVSTKFGHEDDYEKIIARVREGTVIIDD 381 (457)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEEEEeCCHHHHHHHHHhcCCCeEEEeC
Confidence 588999998765444444333335999888775543 466667777766555455444
No 279
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=32.99 E-value=2.5e+02 Score=26.54 Aligned_cols=84 Identities=11% Similarity=0.090 Sum_probs=62.0
Q ss_pred eechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+... .+ +.+++++....|-...+ +...++.+..|+..+... .+....+...+++.+++.++
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g-~~~g~~V~v~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~ 88 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALG-VRPGDCVALLMRNDFAF-FEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLI 88 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEE
Confidence 46777776655554433 34 67889998888865433 457778899999988885 56789999999999999999
Q ss_pred echHHHHHHH
Q 045351 281 LAPPVVLKMA 290 (349)
Q Consensus 281 ~~P~~l~~l~ 290 (349)
........+.
T Consensus 89 ~~~~~~~~~~ 98 (509)
T PRK12406 89 AHADLLHGLA 98 (509)
T ss_pred Eccchhhhhh
Confidence 8776666543
No 280
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.80 E-value=3.3e+02 Score=24.01 Aligned_cols=78 Identities=10% Similarity=-0.024 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH---HHHHHhcCCeE--ecCCCCCCHHHHHHHHhhcC----C
Q 045351 62 PDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL---YLSLFSLGVVV--SPCNPSCTIPEILRQIHLSK----P 132 (349)
Q Consensus 62 ~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~---~lA~~~~G~~~--v~i~~~~~~~~l~~~l~~~~----~ 132 (349)
+++.+...+-...|+++.|+.|+=.+.+..++....... .=+|-.+|..+ .-++...+.+++...+++.+ .
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDV 90 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345555555566676634787754444444444333333 34888999887 45677778888888887663 3
Q ss_pred eEEEEcC
Q 045351 133 VIAFATH 139 (349)
Q Consensus 133 ~~i~~~~ 139 (349)
+-|++.-
T Consensus 91 ~GIlvql 97 (293)
T PRK14185 91 DGFIVQL 97 (293)
T ss_pred CeEEEec
Confidence 3455543
No 281
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=32.75 E-value=2.2e+02 Score=24.89 Aligned_cols=55 Identities=13% Similarity=0.004 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC----------CCCHHHHHHHHhh-cCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP----------SCTIPEILRQIHL-SKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~----------~~~~~~l~~~l~~-~~~~~i~~~ 138 (349)
+++||+|++.-+. +....-++...|+.++.+.+ ..+.++++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5789988877442 23334456667887766644 3567888888865 456765554
No 282
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=32.72 E-value=2.3e+02 Score=26.76 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC-CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN-PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~-~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+++||+|++=-| ++......+-..-+..+.+|++ -.+.++.++..++..+++++.+...
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 357888876533 4544444444444444444553 3568899999999889999998864
No 283
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=32.50 E-value=4.3e+02 Score=25.21 Aligned_cols=89 Identities=11% Similarity=-0.006 Sum_probs=57.5
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCC-CCCEEEEEcCCCch-HHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLS-KYDVAFLLSQNSVR-VPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~-~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++-...| -.+|++.+...+..++.. .++. ++|++....|-... .+..+++.+..|+..+...
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR----VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH----hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 567777643222 468998887766554432 5667 88998888775432 2345677888898887654
Q ss_pred C-CC--CHHHHHHHHhhcCCeEEEE
Q 045351 116 P-SC--TIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 116 ~-~~--~~~~l~~~l~~~~~~~i~~ 137 (349)
. .. .+..+...+++.++.++..
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 12 3556777788888876644
No 284
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=32.40 E-value=1.7e+02 Score=20.24 Aligned_cols=70 Identities=9% Similarity=-0.058 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCEEEEE-cCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 63 DLTLRIKTLAYSLKTKYKLSKYDVAFLL-SQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 63 ~l~~~~~~~a~~L~~~~g~~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
+=++.+.+++..+.. .+ .-+.|.|. ..+-.+.+.+.--+.+.++.+++++ ..-++.....++..+++-++
T Consensus 7 dRyeTs~~va~~~~~-~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~~v~ 77 (92)
T PF04122_consen 7 DRYETSAKVAKKFYP-DN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIKKVY 77 (92)
T ss_pred CHHHHHHHHHHHhcc-cC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCCEEE
Confidence 345566667777654 22 34444444 4444555544444455688888888 44446666666665444333
No 285
>PLN02550 threonine dehydratase
Probab=32.26 E-value=4.2e+02 Score=26.11 Aligned_cols=90 Identities=14% Similarity=0.014 Sum_probs=55.4
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.++.+..-||+. +-..+++.+ |.+ ....+| .|. ...+=....+.++|.++|..+..+-|...+.....
T Consensus 124 ~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~-e~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~ 197 (591)
T PLN02550 124 VKVLLKREDLQPVFSFKL-RGAYNMMAK-LPK-EQLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQ 197 (591)
T ss_pred CEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHH-hcCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 344444443344556765 222333333 333 345556 333 44555556667788899987777667666676778
Q ss_pred HHhhcCCeEEEEcCcc
Q 045351 126 QIHLSKPVIAFATHDT 141 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~~ 141 (349)
.++..+++++++.+.+
T Consensus 198 ~~r~~GAeVvl~g~~~ 213 (591)
T PLN02550 198 SVERLGATVVLVGDSY 213 (591)
T ss_pred HHHHcCCEEEEeCCCH
Confidence 8899999999997643
No 286
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=32.01 E-value=1.7e+02 Score=25.86 Aligned_cols=64 Identities=16% Similarity=0.083 Sum_probs=51.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecC-CCCCCHHHHHHHHhhcCCeEEEEcCcccc
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPC-NPSCTIPEILRQIHLSKPVIAFATHDTAH 143 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i-~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 143 (349)
++++||.|.=-..||.---..+--|-..|.-.+-+ .-+-..+++...|+..+++-||+++++.+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 68999988888888877777777777888765554 44556789999999999999999887553
No 287
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=31.82 E-value=1.5e+02 Score=23.46 Aligned_cols=20 Identities=25% Similarity=0.287 Sum_probs=18.5
Q ss_pred eeHHHHHHHHHHHHHHHhhh
Q 045351 59 ILYPDLTLRIKTLAYSLKTK 78 (349)
Q Consensus 59 ~Ty~~l~~~~~~~a~~L~~~ 78 (349)
+||.++.+.+.++|..+.++
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999883
No 288
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=31.78 E-value=1.4e+02 Score=23.85 Aligned_cols=42 Identities=7% Similarity=-0.064 Sum_probs=22.5
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecC
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPC 114 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i 114 (349)
+.+|.+ .|+.....+.|...+..+.+-++-=|++.|..-+.+
T Consensus 74 ~~~L~~-~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL 115 (168)
T TIGR00623 74 KEWVQS-SGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVI 115 (168)
T ss_pred HHHHHH-cCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEE
Confidence 344555 666655555555445555555555566666543333
No 289
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=31.78 E-value=1.9e+02 Score=24.45 Aligned_cols=86 Identities=13% Similarity=0.127 Sum_probs=49.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceee-HHHHHH---------------HHHHHHHHHhhhcCCCCCCEEEEEc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRIL-YPDLTL---------------RIKTLAYSLKTKYKLSKYDVAFLLS 91 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~T-y~~l~~---------------~~~~~a~~L~~~~g~~~gd~V~i~~ 91 (349)
.|+.-.|...+ ... +.+++++|.+.....+ |.+-.. ....+...|.. .....-|.|.|.+
T Consensus 16 TT~a~nLA~~l--a~~-G~~VlliD~DpQ~s~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~yD~iiID~ 91 (231)
T PRK13849 16 TTALMGLCAAL--ASD-GKRVALFEADENRPLTRWKENALRSNTWDPACEVYAADELPLLEAAYED-AELQGFDYALADT 91 (231)
T ss_pred HHHHHHHHHHH--HhC-CCcEEEEeCCCCCCHHHHHHhhccccCCCccceecCCCHHHHHHHHHHH-HhhCCCCEEEEeC
Confidence 45555566666 566 7789999875443322 211000 01122233333 2224568899999
Q ss_pred CCCchHHHHHHHHHhcCCeEecCCCCC
Q 045351 92 QNSVRVPVLYLSLFSLGVVVSPCNPSC 118 (349)
Q Consensus 92 ~n~~~~~~~~lA~~~~G~~~v~i~~~~ 118 (349)
|.+.... ...|+..+..+.+|+.|..
T Consensus 92 pp~~~~~-~~~al~~aD~vliP~~ps~ 117 (231)
T PRK13849 92 HGGSSEL-NNTIIASSNLLLIPTMLTP 117 (231)
T ss_pred CCCccHH-HHHHHHHCCEEEEeccCcH
Confidence 8877643 4557777888888887744
No 290
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=31.60 E-value=4e+02 Score=25.01 Aligned_cols=81 Identities=9% Similarity=-0.025 Sum_probs=57.0
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc-hHHHHHHHHHhcCCeEecCCCC--CCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV-RVPVLYLSLFSLGVVVSPCNPS--CTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~i~~~--~~~~~l~~~l~~~~~~ 133 (349)
-.+|++.+...+..+. .. .++..++++....+.+. ..+..+++++..|++.+..+.. .....+...++..++.
T Consensus 159 v~~s~~~~~~~~~~~~---~~-~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (502)
T TIGR01734 159 VQISHDNLVSFTNWML---AD-FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLN 234 (502)
T ss_pred EEEecHHHHHHHHHHH---Hh-CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCe
Confidence 4788888876554332 23 67788888888776543 3345677889999999887654 3567778888888888
Q ss_pred EEEEcCcc
Q 045351 134 IAFATHDT 141 (349)
Q Consensus 134 ~i~~~~~~ 141 (349)
.+......
T Consensus 235 ~~~~~p~~ 242 (502)
T TIGR01734 235 VWVSTPSF 242 (502)
T ss_pred EEEEChhH
Confidence 87776544
No 291
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=31.48 E-value=2.7e+02 Score=24.89 Aligned_cols=55 Identities=9% Similarity=-0.145 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCe--EecCCC--CCCHHHHHHHHhhcCCeEEEE
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVV--VSPCNP--SCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~--~v~i~~--~~~~~~l~~~l~~~~~~~i~~ 137 (349)
++||.|++..+...... ...++.+.|+. .+++++ ....+++...++..++++++.
T Consensus 72 ~~g~~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i 130 (356)
T cd06451 72 EPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTL 130 (356)
T ss_pred CCCCEEEEecCCchhHH-HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEE
Confidence 45666665543333211 12233444543 333332 234566666665445555544
No 292
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=31.44 E-value=3.4e+02 Score=24.99 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS 117 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~ 117 (349)
.-.|.+|+|.......+.++ ..+..+|..++.+...
T Consensus 283 ~l~gkrv~I~~~~~~~~~~~-~~l~elG~~v~~~~~~ 318 (406)
T cd01967 283 RLKGKKVIIYTGGARSWHVI-AALRELGMEVVAAGYE 318 (406)
T ss_pred hccCCEEEEEccCcchHHHH-HHHHHcCCEEEEEEEe
Confidence 34688999998777666666 5677899987666443
No 293
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=30.98 E-value=3.7e+02 Score=25.25 Aligned_cols=91 Identities=10% Similarity=-0.116 Sum_probs=57.7
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.+..+..-|++.= .....+...+++ --+.+|+.|+- ...+-.-..+.++|.+.|..+..+-|...+++...
T Consensus 26 ~~i~~K~E~~nptGS~K~R-~a~~~l~~a~~~-g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 102 (454)
T TIGR01137 26 CELLAKCEFFNPGGSVKDR-IALRMIEDAEAS-GRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVD 102 (454)
T ss_pred ceEEEEEhhcCCCcchHHH-HHHHHHHHHHHc-CCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHH
Confidence 3555555533444444432 222334444443 23477776554 45666677777888889997777766656666778
Q ss_pred HHhhcCCeEEEEcC
Q 045351 126 QIHLSKPVIAFATH 139 (349)
Q Consensus 126 ~l~~~~~~~i~~~~ 139 (349)
.++..++++++++.
T Consensus 103 ~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 103 VLKALGAEIVRTPT 116 (454)
T ss_pred HHHHCCCEEEEcCC
Confidence 88999999999875
No 294
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=30.93 E-value=1.5e+02 Score=21.59 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCC-CchHHHHHHHHHhcCCe
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQN-SVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~ 110 (349)
..+.+.+.+ .++.+.+.|+++|.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~-~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGS-LGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHH-cCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 345555666 788999999999988 47666677777778854
No 295
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=30.91 E-value=1.6e+02 Score=23.54 Aligned_cols=46 Identities=9% Similarity=-0.018 Sum_probs=29.3
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhc-CCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKY-KLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~-g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
.-+|+.|+.+++.++|..+.+.+ |.+ ..+.+...++-..+...++-
T Consensus 5 ~l~s~~~i~~~i~~la~~i~~~~~~~~--~~viv~il~gG~~~a~~La~ 51 (176)
T PRK05205 5 EILDAEALRRALTRIAHEIIERNKGLD--NLVLVGIKTRGVWLAERLAE 51 (176)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCCC--CeEEEEEccCCHHHHHHHHH
Confidence 45899999999999999998722 322 23444444444444444443
No 296
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=30.81 E-value=2.4e+02 Score=25.96 Aligned_cols=57 Identities=23% Similarity=0.225 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++..+.-......+-.+...|+.+..+++ ..+++...++..+.++|+++.
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~--d~~~l~~~i~~~~tklV~ie~ 145 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYP--STEDIIEAIKEGRTKLVFIET 145 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECC--CHHHHHHhcCccCceEEEEEC
Confidence 678888876644333332222223445666555544 356677766554667777654
No 297
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=30.60 E-value=3.2e+02 Score=24.50 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC----CCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP----SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~----~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++-.| + |.....++...|+.++.++. ....+.+...++..++++++..
T Consensus 97 ~~~gd~Vlv~~p-~--y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHP-S--FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCC-C--hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 578899887644 2 33444556667877666643 2456777777765567776654
No 298
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=30.54 E-value=2.3e+02 Score=21.01 Aligned_cols=83 Identities=13% Similarity=0.063 Sum_probs=48.2
Q ss_pred hhHhhHH-HHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEechH------HHHHHHhcCCCCCCCCCcchheehc
Q 045351 238 FHSYGFT-CCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAPP------VVLKMARDGGTMDGYDLSSIEVVAS 309 (349)
Q Consensus 238 ~~~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~------~l~~l~~~~~~~~~~~l~~lr~i~~ 309 (349)
.|..|.. .....-..|-.++... ...++.+.+.+.+.+++++...-. .+..+++.. ... ..+.++ ++.
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L-~~~--~~~~i~-i~~ 86 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELL-REL--GAGDIL-VVG 86 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHH-Hhc--CCCCCE-EEE
Confidence 6888884 3334445566666665 457899999999999998876632 122333322 111 122333 455
Q ss_pred cCCCCCHHHHHHHHHH
Q 045351 310 GGAHLTLSVIRKYLQL 325 (349)
Q Consensus 310 gG~~l~~~~~~~~~~~ 325 (349)
||. .+++..+++.+.
T Consensus 87 GG~-~~~~~~~~~~~~ 101 (122)
T cd02071 87 GGI-IPPEDYELLKEM 101 (122)
T ss_pred ECC-CCHHHHHHHHHC
Confidence 664 455556666553
No 299
>PRK06178 acyl-CoA synthetase; Validated
Probab=30.34 E-value=2.9e+02 Score=26.61 Aligned_cols=85 Identities=11% Similarity=0.059 Sum_probs=64.0
Q ss_pred eechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+...+ + +..++++....+-...+ +...+.++..|+..+..+ ......+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRG-VGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 578888877666654433 4 57888888888765543 456788899999888774 56788899999999999999
Q ss_pred echHHHHHHHh
Q 045351 281 LAPPVVLKMAR 291 (349)
Q Consensus 281 ~~P~~l~~l~~ 291 (349)
..+.....+.+
T Consensus 136 ~~~~~~~~l~~ 146 (567)
T PRK06178 136 ALDQLAPVVEQ 146 (567)
T ss_pred EccchHHHHHH
Confidence 98887765543
No 300
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=30.26 E-value=2.5e+02 Score=26.89 Aligned_cols=84 Identities=7% Similarity=-0.075 Sum_probs=61.7
Q ss_pred eeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEE
Q 045351 204 ALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHV 279 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l 279 (349)
..+|...+......+...+ + +..++++....+-...+ ....+..+..|+..+..+ .+.+..+...+++.++..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g-~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDG-IKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 4578898877666655443 4 67889888888765444 235678888999988774 5678999999999999999
Q ss_pred EechHHHHHH
Q 045351 280 VLAPPVVLKM 289 (349)
Q Consensus 280 ~~~P~~l~~l 289 (349)
+........+
T Consensus 116 ~~~~~~~~~~ 125 (542)
T PRK06018 116 ITDLTFVPIL 125 (542)
T ss_pred EEccccHHHH
Confidence 8876554444
No 301
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=29.77 E-value=1.8e+02 Score=22.82 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=25.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV 95 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~ 95 (349)
.-+||.++.+.++++|..+.+ .| +-+.|+-....+.
T Consensus 8 ~~is~~~i~~~i~~la~~I~~-~~--~~d~vvgv~~GG~ 43 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLP-AG--QWKGIIAVTRGGL 43 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHh-hC--CCCEEEEEecCCe
Confidence 358999999999999999988 54 2344444444343
No 302
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=29.55 E-value=2.5e+02 Score=25.17 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=37.8
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.. .++++|++|+|... +.--..+...+...|+.++.++ .+++++. .+++.+++.++.
T Consensus 159 ~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~--~~~~~~~-~~~~~Ga~~~i~ 216 (349)
T TIGR03201 159 AVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAID--IDPEKLE-MMKGFGADLTLN 216 (349)
T ss_pred HHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc--CCHHHHH-HHHHhCCceEec
Confidence 444 68899999999998 6555555555566788655553 3455554 445667766553
No 303
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=29.27 E-value=2.7e+02 Score=21.47 Aligned_cols=77 Identities=21% Similarity=0.070 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHhhh--cCCCCCCEEEEEc-CCCc-hHHHHHHHHHhcCCeEecCCCCC-------CHHHHHHHHhhcC
Q 045351 63 DLTLRIKTLAYSLKTK--YKLSKYDVAFLLS-QNSV-RVPVLYLSLFSLGVVVSPCNPSC-------TIPEILRQIHLSK 131 (349)
Q Consensus 63 ~l~~~~~~~a~~L~~~--~g~~~gd~V~i~~-~n~~-~~~~~~lA~~~~G~~~v~i~~~~-------~~~~l~~~l~~~~ 131 (349)
.|.+++..+-....+. ...-+|..|+++. .+|- --.....|+.++|+.++-+++.. +.+...+.+...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3455555555555541 1355677766664 4554 44556678999999998887443 466777788888
Q ss_pred CeEEEEcCc
Q 045351 132 PVIAFATHD 140 (349)
Q Consensus 132 ~~~i~~~~~ 140 (349)
.+++++-..
T Consensus 95 ~D~iv~R~~ 103 (142)
T PF02729_consen 95 VDAIVIRHP 103 (142)
T ss_dssp CSEEEEEES
T ss_pred hheEEEEec
Confidence 777776543
No 304
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=29.22 E-value=1.7e+02 Score=21.36 Aligned_cols=27 Identities=11% Similarity=-0.054 Sum_probs=22.8
Q ss_pred eeeHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045351 58 RILYPDLTLRIKTLAYSLKTKYKLSKYD 85 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a~~L~~~~g~~~gd 85 (349)
.++|.++.+.++++|..|.+ .+.....
T Consensus 4 ~~~~~~~~~~~~~la~~i~~-~~~~~~~ 30 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKE-SGFDFDV 30 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHH-HTTTSSE
T ss_pred EEcHHHHHHHHHHHHHHHHH-hCCCCCE
Confidence 57999999999999999998 6665544
No 305
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=29.22 E-value=4.2e+02 Score=24.72 Aligned_cols=48 Identities=15% Similarity=0.061 Sum_probs=33.3
Q ss_pred CCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-C---CHHHHHHHHHhh
Q 045351 227 RPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-F---DFGRMLKAVEEF 274 (349)
Q Consensus 227 ~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 274 (349)
+--+++...|+.+...+ ..+..+|.+|.++++-+. . ....+.+.+.+.
T Consensus 96 P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~a 149 (429)
T cd07100 96 PLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREA 149 (429)
T ss_pred eeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 44577778888776644 577789999999998853 2 334566666663
No 306
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=29.10 E-value=3.1e+02 Score=25.03 Aligned_cols=56 Identities=21% Similarity=0.150 Sum_probs=36.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC------CCCHHHHHHHHhhc------CCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP------SCTIPEILRQIHLS------KPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~------~~~~~~l~~~l~~~------~~~~i~~~~ 139 (349)
+++||+|++... .+.....++...|+.++.++. ..+.+.+...++.. ++++|+...
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 478998877532 333344567778988777654 14678888877653 577777654
No 307
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=29.04 E-value=3.4e+02 Score=25.46 Aligned_cols=57 Identities=4% Similarity=0.030 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC----------------CHHHHHHHHhhcCCeEEEEcCc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC----------------TIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~----------------~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
.|.+|+|..+...-+-++-+ +..+|..++.+.... ...++...+++.++++++.+..
T Consensus 310 ~Gkrvai~~~~~~~~~l~~~-l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~~~dliig~s~ 382 (432)
T TIGR01285 310 GGKKVAIAAEPDLLAAWATF-FTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAAGADLLITNSH 382 (432)
T ss_pred CCCEEEEEcCHHHHHHHHHH-HHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhcCCCEEEECcc
Confidence 48899999876654555555 568998876664332 2245555566666666665543
No 308
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=28.79 E-value=1.7e+02 Score=28.23 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCC--HHHHHHHHhhcCCeEEEEc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCT--IPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~--~~~l~~~l~~~~~~~i~~~ 138 (349)
.|.+|+|..+....+-++-+..-.+|..++....... .+.++..++.....+++.+
T Consensus 294 ~Gkrv~I~gd~~~a~~l~~~L~~ElG~~vv~~gt~~~~~~~~~~~~~~~~~~~~~i~d 351 (511)
T TIGR01278 294 TGKRAFVFGDATHAVGMTKILARELGIHIVGAGTYCKYDADWVREQVAGYVDEVLITD 351 (511)
T ss_pred cCCeEEEEcCcHHHHHHHHHHHHhCCCEEEecCCchhhhHHHHHHHHHhcCCCeEEeC
Confidence 4789999988655555555555569998876654333 2333444444444555544
No 309
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.75 E-value=1.9e+02 Score=19.69 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=50.2
Q ss_pred ceeeHHHHHHHHHHHHH---HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRIKTLAY---SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~---~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
...||++|...-+.+++ .|.. ..++..|.|+|+.=++-. ..-++.++...+.+++++-+++.+++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k-~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~ 75 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAK-VDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAE 75 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcc-cccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCch
Confidence 45789998888776654 4665 788999999999766542 23467788888999999999888776
Q ss_pred E
Q 045351 134 I 134 (349)
Q Consensus 134 ~ 134 (349)
+
T Consensus 76 i 76 (88)
T COG4009 76 I 76 (88)
T ss_pred h
Confidence 4
No 310
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=28.66 E-value=3.5e+02 Score=26.23 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=69.2
Q ss_pred EEEEeccCCCCCCceeeechhhHHHHHhhhhcccc---CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-CCCCH
Q 045351 189 AAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA---ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-GKFDF 264 (349)
Q Consensus 189 ~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~ 264 (349)
..|+|-+-.++. -.+|.+.|......+...+. .. ++|++..++|+.-.. ...+++++..|+.-+.. +.|.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCCCH
Confidence 444555444333 57888888876666544442 25 899999999986554 34566777888775554 68999
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHH
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
..+..-+..-++..++.....++..-
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred HHHHHHHHccCCCEEEEecccccccc
Confidence 99999999999999998877776543
No 311
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=28.50 E-value=4.2e+02 Score=23.53 Aligned_cols=91 Identities=12% Similarity=-0.052 Sum_probs=58.5
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.+..+-.=|+++- .....+.....+ |..+++.|.... .+-.-..+.++|...|..+..+-|...+.....
T Consensus 16 ~~i~~K~E~~nptGS~K~R-~a~~~l~~a~~~--g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 91 (316)
T cd06448 16 CNVFLKLENLQPSGSFKIR-GIGHLCQKSAKQ--GLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVE 91 (316)
T ss_pred CeEEEEeccCCCcCChHHH-HHHHHHHHHHHh--hcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3555655544455566642 223333333333 444566665554 455666677888889988777777767777888
Q ss_pred HHhhcCCeEEEEcCc
Q 045351 126 QIHLSKPVIAFATHD 140 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~ 140 (349)
.++..++++++++..
T Consensus 92 ~l~~~GA~v~~~~~~ 106 (316)
T cd06448 92 KLRDEGATVVVHGKV 106 (316)
T ss_pred HHHHcCCEEEEECCc
Confidence 999999999998765
No 312
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.41 E-value=2.4e+02 Score=27.12 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=59.7
Q ss_pred eechhhHHHHHhhhhcccc---CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVRA---ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+......+...+. .+..++++....+-.. -.+...++++..|+..+..+ ...+..+...+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL-QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 5788888776666544331 2678888888877543 22356788999999999885 56788899999999999988
Q ss_pred echHHHH
Q 045351 281 LAPPVVL 287 (349)
Q Consensus 281 ~~P~~l~ 287 (349)
..+.+.+
T Consensus 127 ~~~~~~~ 133 (560)
T PRK08974 127 IVSNFAH 133 (560)
T ss_pred EeccccH
Confidence 7765443
No 313
>PRK10717 cysteine synthase A; Provisional
Probab=27.97 E-value=4.4e+02 Score=23.53 Aligned_cols=93 Identities=9% Similarity=-0.152 Sum_probs=58.1
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+-++.+-.+..+..=||+. +-....+...+.+ .-+.+|+.|+- ...+-.-..+-++|.++|..+..+-|...++...
T Consensus 27 g~~i~~K~E~~nptGS~K~-Rga~~~v~~a~~~-g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~ 103 (330)
T PRK10717 27 GCEILGKAEFLNPGGSVKD-RAALNIIWDAEKR-GLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKK 103 (330)
T ss_pred CCeEEEEeeccCCCCCchH-HHHHHHHHHHHHc-CCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHH
Confidence 3355555553344445544 2222233333433 22567776544 5556666777778888998766666666667778
Q ss_pred HHHhhcCCeEEEEcCc
Q 045351 125 RQIHLSKPVIAFATHD 140 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~ 140 (349)
..++..++++++++..
T Consensus 104 ~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 104 DLLRALGAELVLVPAA 119 (330)
T ss_pred HHHHHcCCEEEEeCCc
Confidence 8999999999999853
No 314
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=27.90 E-value=5.5e+02 Score=27.90 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=62.8
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHH-HHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVP-VLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++-.. +| -.+|.+.+...+... -.. +++.++|+++...+-+.+.- .-+++.+..|++.+..++
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~---~~~-~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWM---QNH-YPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHH---HHh-cCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 5667766432 22 467887776554322 233 78899999998888765543 345677888998887654
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 117 --SCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 117 --~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
...++.+...+++.++.++.....
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps 698 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPS 698 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHH
Confidence 346778888999998888776543
No 315
>PRK04914 ATP-dependent helicase HepA; Validated
Probab=27.79 E-value=3.6e+02 Score=28.40 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH-HhcCCeEecCCCCCCHHHHHHHHhhc-----CCeEEEEcC
Q 045351 66 LRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL-FSLGVVVSPCNPSCTIPEILRQIHLS-----KPVIAFATH 139 (349)
Q Consensus 66 ~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~-~~~G~~~v~i~~~~~~~~l~~~l~~~-----~~~~i~~~~ 139 (349)
.++..+...|+. ..+++|+|++..........-.+ .+.|..++.+...++..+-...++.. ++.++++++
T Consensus 479 ~Ki~~L~~~L~~----~~~~KvLVF~~~~~t~~~L~~~L~~~~Gi~~~~ihG~~s~~eR~~~~~~F~~~~~~~~VLIsTd 554 (956)
T PRK04914 479 PRVEWLIDFLKS----HRSEKVLVICAKAATALQLEQALREREGIRAAVFHEGMSIIERDRAAAYFADEEDGAQVLLCSE 554 (956)
T ss_pred HHHHHHHHHHHh----cCCCeEEEEeCcHHHHHHHHHHHhhccCeeEEEEECCCCHHHHHHHHHHHhcCCCCccEEEech
Confidence 445556666655 34678888876443333333333 24688889999999988877777654 366777765
Q ss_pred c
Q 045351 140 D 140 (349)
Q Consensus 140 ~ 140 (349)
.
T Consensus 555 v 555 (956)
T PRK04914 555 I 555 (956)
T ss_pred h
Confidence 3
No 316
>PRK07787 acyl-CoA synthetase; Validated
Probab=27.70 E-value=5.1e+02 Score=24.18 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=61.2
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCC--CchHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQN--SVRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++-.. +| -.+|+..+...+..++. . .++.++|++....|- ...++..+++.+..|+.++..+
T Consensus 127 ~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 127 PDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAE---A-WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHH---h-cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 5666665432 22 36788888776554443 3 567889988766653 2345666888999999988765
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
....+.+...++ .++..+.....
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~ 225 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPT 225 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchH
Confidence 456778888888 88887776554
No 317
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=27.69 E-value=1e+02 Score=21.09 Aligned_cols=41 Identities=7% Similarity=-0.096 Sum_probs=34.1
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS 112 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 112 (349)
..+|.+..|++.|+-++.+.-...|....+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 35666668999999999999999999999999998876533
No 318
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=27.65 E-value=5.8e+02 Score=27.33 Aligned_cols=92 Identities=18% Similarity=0.040 Sum_probs=61.6
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|.+-.. +| -.+|.+.+...+....+ . .++.++|++....|-.. .+...++..+..|+..+..+
T Consensus 792 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 792 PDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---R-IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---h-hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 5677766432 22 46788888766555543 3 56789999988877432 23345667778898887766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
.....+.+...+++.++..+.....
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~ 892 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDT 892 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHH
Confidence 5555666777888888888876543
No 319
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=27.63 E-value=5.3e+02 Score=24.62 Aligned_cols=91 Identities=10% Similarity=0.012 Sum_probs=61.8
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHH---HHHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVP---VLYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~---~~~lA~~~~G~~~v~i 114 (349)
++.+|++-.. +| -.+|...+...+.... .. .++.++|++...+|-...+- ...++++..|+..+..
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EI-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHH---Hh-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 5667665322 22 4688888877665433 33 67889999988877543322 2467888899988765
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 115 NPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 115 ~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
. ..........+++.++.++.....
T Consensus 257 ~-~~~~~~~~~~l~~~~~t~~~~~p~ 281 (536)
T PRK10946 257 P-DPSATLCFPLIEKHQVNVTALVPP 281 (536)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeChH
Confidence 4 446667778888898888877654
No 320
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=27.52 E-value=3.1e+02 Score=24.66 Aligned_cols=56 Identities=18% Similarity=-0.018 Sum_probs=35.3
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 79 YKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.++++|++|+|....+ .-..+..+| ...|+.++.+. .+.+....+.+..+++.++.
T Consensus 154 ~~~~~g~~VlV~GaaG~vG~~aiqlA-k~~G~~Vi~~~--~~~~k~~~~~~~lGa~~vi~ 210 (348)
T PLN03154 154 CSPKKGDSVFVSAASGAVGQLVGQLA-KLHGCYVVGSA--GSSQKVDLLKNKLGFDEAFN 210 (348)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHH-HHcCCEEEEEc--CCHHHHHHHHHhcCCCEEEE
Confidence 5789999999999855 444544444 55788655442 24444444434677777664
No 321
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=27.42 E-value=1.3e+02 Score=25.74 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe-EecCCCCCCHHHH---HHHHhhcCCeEEEE
Q 045351 62 PDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV-VSPCNPSCTIPEI---LRQIHLSKPVIAFA 137 (349)
Q Consensus 62 ~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~-~v~i~~~~~~~~l---~~~l~~~~~~~i~~ 137 (349)
+++.++..++.+.+++...--++ +..+...+...++.-.+++-..+.. ..+ ....+++++ ...+++.+.++||+
T Consensus 128 ~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~~ 205 (256)
T PF01297_consen 128 EKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIFT 205 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEEe
Confidence 33444444444444432222233 5666778899998888877666544 111 233355554 45568889999999
Q ss_pred cCcccc
Q 045351 138 THDTAH 143 (349)
Q Consensus 138 ~~~~~~ 143 (349)
+.....
T Consensus 206 e~~~~~ 211 (256)
T PF01297_consen 206 EPQFSS 211 (256)
T ss_dssp ETTS-T
T ss_pred cCCCCh
Confidence 875443
No 322
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=27.20 E-value=3.8e+02 Score=24.02 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC----CCCHHHHHHHHhhcCCeEEEEc
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP----SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~----~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
.+||.|++-.|. |.....++...|+.+++++. ..+.+++...+...++++++..
T Consensus 103 ~~gd~vlv~~P~---y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 103 KPGATVLAPEPG---FVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred CCCCEEEECCCC---HHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 567777766442 33444556667776665532 2456677777665566666554
No 323
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=27.09 E-value=3.2e+02 Score=25.66 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCC----HHHHHHHHhh
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCT----IPEILRQIHL 129 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~----~~~l~~~l~~ 129 (349)
-.|.+|+|..+....+-++-+-. .+|..++.+..... .+++...++.
T Consensus 301 l~gkrv~i~g~~~~~~~la~~L~-elGm~v~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
T cd01974 301 LHGKKFALYGDPDFLIGLTSFLL-ELGMEPVHVLTGNGGKRFEKEMQALLDA 351 (435)
T ss_pred cCCCEEEEEcChHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 35789999887655444444444 78988755433222 2344555554
No 324
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=27.04 E-value=2.4e+02 Score=20.27 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=33.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS 112 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 112 (349)
..+.+.++. ..+.+ .+..+.+.|.++|.++...-.+...+...|..-+
T Consensus 41 iniP~~~l~-------~~l~~-l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v 88 (104)
T PRK10287 41 INIPLKEVK-------ERIAT-AVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHA 88 (104)
T ss_pred EECCHHHHH-------HHHHh-cCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeE
Confidence 345665543 34555 5666677899999998887777788888887654
No 325
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=27.00 E-value=1.7e+02 Score=24.33 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=32.1
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcC-C--CCC-CEEEEEcCCCchHHHHHHHHH
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYK-L--SKY-DVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g-~--~~g-d~V~i~~~n~~~~~~~~lA~~ 105 (349)
.-+|+.|+.+++.++|..+.+.+. . ..+ ..|++..-++--.+...|+-.
T Consensus 26 ~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~ 78 (211)
T PTZ00271 26 TLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARF 78 (211)
T ss_pred EecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHH
Confidence 458999999999999999987331 1 012 345566556655555555433
No 326
>PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional
Probab=26.84 E-value=4.5e+02 Score=24.36 Aligned_cols=73 Identities=8% Similarity=-0.079 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCCC--------CCHHHHHHHHhhc-------
Q 045351 67 RIKTLAYSLKTKYKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNPS--------CTIPEILRQIHLS------- 130 (349)
Q Consensus 67 ~~~~~a~~L~~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~~--------~~~~~l~~~l~~~------- 130 (349)
.+..+++.+....|+++---++|++|.+ =-.+.+-..+..+|+.++.++.. .+...++.+++..
T Consensus 131 ~~~hi~kn~l~~~~ik~PlgllL~GPPGcGKTllAraiA~elg~~~i~vsa~eL~sk~vGEsEk~IR~~F~~A~~~a~~~ 210 (413)
T PLN00020 131 VAVHIAKNFLALPNIKVPLILGIWGGKGQGKSFQCELVFKKMGIEPIVMSAGELESENAGEPGKLIRQRYREAADIIKKK 210 (413)
T ss_pred HHHHHHhhhhhccCCCCCeEEEeeCCCCCCHHHHHHHHHHHcCCCeEEEEHHHhhcCcCCcHHHHHHHHHHHHHHHhhcc
Confidence 3445555554436788888899999986 45677777888899998888533 3556666666533
Q ss_pred -CCeEEEEcC
Q 045351 131 -KPVIAFATH 139 (349)
Q Consensus 131 -~~~~i~~~~ 139 (349)
.|.+||.|+
T Consensus 211 ~aPcVLFIDE 220 (413)
T PLN00020 211 GKMSCLFIND 220 (413)
T ss_pred CCCeEEEEeh
Confidence 588888875
No 327
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=26.74 E-value=2.1e+02 Score=19.37 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=29.9
Q ss_pred HHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 70 TLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 70 ~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
.+...+.. .++.+++.|++++.++.....+...+...|..
T Consensus 43 ~~~~~~~~-~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKR-LGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHH-cCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 44555555 77888999999998888777777777777764
No 328
>PRK13382 acyl-CoA synthetase; Provisional
Probab=26.69 E-value=5e+02 Score=24.82 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=61.5
Q ss_pred eechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+... .+ +.+++++...++-.-. -+...++.+..|+..+..+ .+....+...+++.+++.++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g-~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 145 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALP-IGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVI 145 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEE
Confidence 57888887666554443 34 6788999888875444 3467888999999998885 55788899999999999988
Q ss_pred echHHHHHH
Q 045351 281 LAPPVVLKM 289 (349)
Q Consensus 281 ~~P~~l~~l 289 (349)
........+
T Consensus 146 ~~~~~~~~~ 154 (537)
T PRK13382 146 YDEEFSATV 154 (537)
T ss_pred EchhhHHHH
Confidence 876554433
No 329
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=26.62 E-value=1e+02 Score=25.37 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 65 TLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 65 ~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.++.+-.+..+..+++++++|++.++.. .|-.++||+ +....+.-++++|....
T Consensus 86 lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpie-------~A~~~rekGa~vI~vTS 139 (243)
T COG4821 86 LERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPIE-------VAEYAREKGAKVIAVTS 139 (243)
T ss_pred hHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcchH-------HHHHHHhcCCeEEEEeh
Confidence 5677788888877799999999988876 455566552 45556666777776654
No 330
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=26.62 E-value=3.7e+02 Score=26.40 Aligned_cols=94 Identities=11% Similarity=0.024 Sum_probs=59.5
Q ss_pred eeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH----HHHHHHhcCC--eEecCC------CCCCHHHHHH
Q 045351 58 RILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV----LYLSLFSLGV--VVSPCN------PSCTIPEILR 125 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~----~~lA~~~~G~--~~v~i~------~~~~~~~l~~ 125 (349)
.+...++...+.+++..+.+ +++|.|+++-..+-+. +..++-++|+ +...|+ ...+.+.++.
T Consensus 49 P~~l~~m~~a~~ri~~ai~~------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 45567777777777776665 6789999987766543 4556667887 222332 2567777777
Q ss_pred HHhhcCCeEEEEcCc------ccccccccCcceEEeCCC
Q 045351 126 QIHLSKPVIAFATHD------TAHKIPQLKYGTVLLDSP 158 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~~~ 158 (349)
+.+ .+++++++-+. ..+.+.+.+..+|+.|-+
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC
Confidence 665 36677666542 122234567788887754
No 331
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=26.37 E-value=45 Score=30.38 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=28.7
Q ss_pred hheehccCCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 304 IEVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 304 lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
-+.+++||+.-++-+++.+++.++...+.-..++|.
T Consensus 286 ~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi 321 (364)
T PF03702_consen 286 DEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGI 321 (364)
T ss_dssp EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS
T ss_pred ceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCC
Confidence 368899999999999999999998876666677774
No 332
>PRK12582 acyl-CoA synthetase; Provisional
Probab=26.28 E-value=2.8e+02 Score=27.29 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=64.2
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++....+ .| ..-.+|...+...+..+...+ + +.+++++...++-.. -.+...++++..|+..+..
T Consensus 61 ~~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl 135 (624)
T PRK12582 61 EAPDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLG-LDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPV 135 (624)
T ss_pred HCCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeec
Confidence 34566665432211 22 134689998887776655433 4 678999999888543 3345677899999998887
Q ss_pred CC-CC-----HHHHHHHHHhhcccEEEech
Q 045351 260 GK-FD-----FGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 260 ~~-~~-----~~~~~~~i~~~~~t~l~~~P 283 (349)
+. +. ...+...++..++..++...
T Consensus 136 ~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 136 SPAYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred cCccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 53 33 37888888888888877654
No 333
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=25.96 E-value=5.7e+02 Score=25.32 Aligned_cols=67 Identities=12% Similarity=0.004 Sum_probs=42.5
Q ss_pred CCCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-CC---HHHHHHHHHhh--c---ccEEEechHHHHHHHhc
Q 045351 226 SRPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-FD---FGRMLKAVEEF--R---VSHVVLAPPVVLKMARD 292 (349)
Q Consensus 226 ~~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~--~---~t~l~~~P~~l~~l~~~ 292 (349)
.+--+++...|+.+...+ +.+..+|.+|.++++-+. .. ...+.+.+.+. . ++++......-..|+.+
T Consensus 248 eP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~ 325 (604)
T PLN02419 248 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDD 325 (604)
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhC
Confidence 356688999998877776 456679999999998853 33 34455666664 3 33333333344555544
No 334
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.78 E-value=2.7e+02 Score=20.30 Aligned_cols=36 Identities=14% Similarity=-0.023 Sum_probs=30.9
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+-..|.-++-+.+..+.+++...+.+.+|++|....
T Consensus 23 l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 23 LRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 334788888899999999999999999999988764
No 335
>PRK06060 acyl-CoA synthetase; Validated
Probab=25.70 E-value=3.8e+02 Score=26.85 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=64.7
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.++++. + . .+|...+...+..+... .+ +.+++++...++-...+ +..++.++..|+..+..+
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g-~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~ 86 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRG-LSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLAN 86 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecC
Confidence 467777652 2 1 47888887766654433 34 67899999988865544 346778899999888775
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVL 287 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~ 287 (349)
.+....+...++..++..++.......
T Consensus 87 p~~~~~~l~~~l~~~~~~~vi~~~~~~~ 114 (705)
T PRK06060 87 PELHRDDHALAARNTEPALVVTSDALRD 114 (705)
T ss_pred CCCCHHHHHHHHhcCCCcEEEEchHHhh
Confidence 456778888888888888877654433
No 336
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=25.64 E-value=4e+02 Score=23.15 Aligned_cols=61 Identities=18% Similarity=0.033 Sum_probs=44.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe--cCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS--PCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v--~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
.-=+|-+|+.+++-..+..++...+..+|+-+. .-||..+++.+...|...+..+.-.-.+
T Consensus 39 kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~ge 101 (268)
T PF05221_consen 39 KPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGE 101 (268)
T ss_dssp -TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT-
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCC
Confidence 344688999999999999999999999999665 4578889999998888877765554433
No 337
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=25.56 E-value=1.7e+02 Score=21.42 Aligned_cols=40 Identities=13% Similarity=0.048 Sum_probs=31.5
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR 96 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~ 96 (349)
...+-.+-.+.+.+++..|.+.+|+.+.+....+.++..+
T Consensus 67 g~~~~e~k~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~~ 106 (116)
T PTZ00397 67 GGISRSNNSSIAAAITKILASHLKVKSERVYIEFKDCSAQ 106 (116)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEECChh
Confidence 3456677888899999999998899998887777666543
No 338
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=25.26 E-value=2.8e+02 Score=20.45 Aligned_cols=38 Identities=16% Similarity=-0.042 Sum_probs=31.6
Q ss_pred HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 102 LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 102 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
..+-..|.-++.+.+..+.+++....++.+|++|+...
T Consensus 21 ~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 21 RALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 33455788899999999999999999999999988764
No 339
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=25.15 E-value=2.8e+02 Score=24.61 Aligned_cols=57 Identities=12% Similarity=-0.099 Sum_probs=36.4
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
+.. .++++|++|+|...-+. -..+...+...|+.++.+.. +++. ...+++.+++.++
T Consensus 158 ~~~-~~~~~g~~VlV~G~g~i-G~~a~~~a~~~G~~vi~~~~--~~~~-~~~a~~~Ga~~vi 214 (329)
T TIGR02822 158 LLR-ASLPPGGRLGLYGFGGS-AHLTAQVALAQGATVHVMTR--GAAA-RRLALALGAASAG 214 (329)
T ss_pred HHh-cCCCCCCEEEEEcCCHH-HHHHHHHHHHCCCeEEEEeC--ChHH-HHHHHHhCCceec
Confidence 444 68999999999987444 34444455567876555433 3333 4566777877665
No 340
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=25.08 E-value=5.2e+02 Score=25.94 Aligned_cols=88 Identities=9% Similarity=-0.006 Sum_probs=65.7
Q ss_pred ceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhccc
Q 045351 202 KGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVS 277 (349)
Q Consensus 202 K~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t 277 (349)
+...+|.+.+...+..+...+ + +.+++++...++-.-.. +...++++..|+..+-. ..+.++.+...++..++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELG-LTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 356789999888776655443 4 68899998888864322 24677888889887766 467889999999999999
Q ss_pred EEEechHHHHHHHh
Q 045351 278 HVVLAPPVVLKMAR 291 (349)
Q Consensus 278 ~l~~~P~~l~~l~~ 291 (349)
.++.....+..+..
T Consensus 196 ~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 196 AIVCNGKNVPNLLR 209 (700)
T ss_pred EEEECHHHHHHHHH
Confidence 99988776666544
No 341
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.01 E-value=4.4e+02 Score=25.22 Aligned_cols=82 Identities=16% Similarity=0.038 Sum_probs=59.8
Q ss_pred eechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 205 LLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
.+|...+...+..+...+ + +..++++....+-.-.+ +...++.+..|+..+... ......+...+++.++..++
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g-~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii 119 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRG-VGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVV 119 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEE
Confidence 688888877666544333 4 67788888877754333 456788889999988775 55788899999999999888
Q ss_pred echHHHHH
Q 045351 281 LAPPVVLK 288 (349)
Q Consensus 281 ~~P~~l~~ 288 (349)
..+.....
T Consensus 120 ~~~~~~~~ 127 (542)
T PRK07786 120 TEAALAPV 127 (542)
T ss_pred EccchHHH
Confidence 87655443
No 342
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=24.83 E-value=1.7e+02 Score=26.11 Aligned_cols=49 Identities=8% Similarity=0.085 Sum_probs=35.4
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCe-EecCCCCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVV-VSPCNPSC 118 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~-~v~i~~~~ 118 (349)
..++..|.+ +|+.+.+.|++++.++..+ .-+++.+..+|.. +..++-.+
T Consensus 89 ~~~~~~l~~-~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~ 139 (320)
T PLN02723 89 EAFAAAVSA-LGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGL 139 (320)
T ss_pred HHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCH
Confidence 567888998 9999999999998776544 3445677778863 44555443
No 343
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.83 E-value=6.1e+02 Score=24.20 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=58.0
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCC-CEEEEEcCCC--chHHHHHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKY-DVAFLLSQNS--VRVPVLYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~g-d~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i 114 (349)
++.++++....| -.+|+..+...+... ... .++.++ |++...+|-. ..++..+++.+..|+..+.+
T Consensus 151 ~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~---~~~-~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 151 EDDLALMQLTSGSTGSPKAVQITHGNLYANAEAM---FVA-AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHH---HHh-cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 567777653222 468888886654433 233 567776 7887777643 34444566778889988877
Q ss_pred CCC---CCHHHHHHHHhhcCCeEEEEc
Q 045351 115 NPS---CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 115 ~~~---~~~~~l~~~l~~~~~~~i~~~ 138 (349)
.+. ..+.....++++.++.++.+.
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~ 253 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAP 253 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECc
Confidence 543 245566788899999876543
No 344
>PRK07503 methionine gamma-lyase; Provisional
Probab=24.79 E-value=3.7e+02 Score=24.87 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=31.8
Q ss_pred CCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+ .+. +.....++-..|+.+..++.. ..+++...++. +.++|+.+
T Consensus 101 l~~Gd~Viv~~~-~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~le 157 (403)
T PRK07503 101 LRPGDEVIVDQT-LYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYFE 157 (403)
T ss_pred cCCCCEEEEccC-ccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEEe
Confidence 678888777543 221 111223445678877777653 46666666644 56777753
No 345
>PRK06381 threonine synthase; Validated
Probab=24.72 E-value=2.1e+02 Score=25.35 Aligned_cols=88 Identities=6% Similarity=-0.105 Sum_probs=54.9
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.+..+-.=||++-- +......+.+ .|. +.| +....+-.-..+-++|...|..+..+-|...+.....
T Consensus 31 ~~i~~K~E~~nptGS~K~R~--a~~~l~~a~~-~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~ 103 (319)
T PRK06381 31 RKIYLKFEGANPTGTQKDRI--AEAHVRRAMR-LGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVK 103 (319)
T ss_pred ceEEEEecCCCCccCcHHHH--HHHHHHHHHH-cCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 35666666445555555521 2222223343 342 344 4455666777777888889987666655555566677
Q ss_pred HHhhcCCeEEEEcCc
Q 045351 126 QIHLSKPVIAFATHD 140 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~ 140 (349)
.++..++++++++..
T Consensus 104 ~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 104 EMEKYGAEIIYVDGK 118 (319)
T ss_pred HHHHcCCEEEEcCCC
Confidence 899999999999865
No 346
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.71 E-value=2.4e+02 Score=24.55 Aligned_cols=82 Identities=10% Similarity=0.058 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHH---HHHHHHhhcCCeEEEE
Q 045351 62 PDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIP---EILRQIHLSKPVIAFA 137 (349)
Q Consensus 62 ~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~---~l~~~l~~~~~~~i~~ 137 (349)
+.+.++..++-..++++.. +..++++.+..++...++.-.+++-..|..-+.=...-++. ++...+++.+.++||+
T Consensus 137 ~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 216 (276)
T cd01016 137 EAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIFV 216 (276)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3344444444444444222 23345677777888888877666555542211112222444 4455567889999999
Q ss_pred cCcccc
Q 045351 138 THDTAH 143 (349)
Q Consensus 138 ~~~~~~ 143 (349)
+.....
T Consensus 217 e~~~~~ 222 (276)
T cd01016 217 ESSVNQ 222 (276)
T ss_pred eCCCCH
Confidence 876543
No 347
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=24.65 E-value=3.6e+02 Score=24.75 Aligned_cols=55 Identities=15% Similarity=0.071 Sum_probs=23.6
Q ss_pred CCCCCEEEEEcCCCch-HHHHHHHHHhcC-CeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVR-VPVLYLSLFSLG-VVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~-~~~~~lA~~~~G-~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+ .+. ....+-.....+ ..+..++ ....+.+...++. +.++|+..
T Consensus 87 l~~GD~Vl~~~p-~y~~~~~~~~~~~~~~~~~v~~~d-~~d~~~l~~ai~~-~tklV~l~ 143 (382)
T TIGR02080 87 LGPDDLLVAPHD-CYGGTYRLLNALAKKGCFRVLFVD-QGDEQALRAALAQ-KPKLVLIE 143 (382)
T ss_pred cCCCCEEEEcCC-CcHHHHHHHHHHHhhcCeEEEEEC-CCCHHHHHHhcCc-CceEEEEE
Confidence 466776655433 332 222222222333 3333333 2345555555533 45665543
No 348
>PRK09192 acyl-CoA synthetase; Validated
Probab=24.41 E-value=5.7e+02 Score=24.76 Aligned_cols=85 Identities=8% Similarity=-0.059 Sum_probs=61.2
Q ss_pred eeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC-C-------CHHHHHHHHH
Q 045351 204 ALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK-F-------DFGRMLKAVE 272 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~-~-------~~~~~~~~i~ 272 (349)
-.+|...+...+..+...+ + +.+++++....+-.- ..+...++++..|+..+..+. + ..+++...++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~g-i~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALG-LKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 5688888876665544433 4 678999999988633 334567789999999888842 1 1578889999
Q ss_pred hhcccEEEechHHHHHHH
Q 045351 273 EFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 273 ~~~~t~l~~~P~~l~~l~ 290 (349)
+.++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999888776554433
No 349
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=24.35 E-value=4.3e+02 Score=22.19 Aligned_cols=92 Identities=13% Similarity=-0.015 Sum_probs=55.7
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+.++.+-.+..+..-|+++--.. -+...+.+ .|..+++.|+.. ..+-.-..+.++|...|..++.+-|...+....
T Consensus 14 ~~~l~~K~e~~~ptgS~K~R~a~--~~l~~a~~-~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~ 89 (244)
T cd00640 14 GANIYLKLEFLNPTGSFKDRGAL--NLILLAEE-EGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKV 89 (244)
T ss_pred CCEEEEEecccCCcCCcHHHHHH--HHHHHHHH-cCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 34555555533444455443222 22223333 343345555444 445666677777888998777776666677778
Q ss_pred HHHhhcCCeEEEEcCc
Q 045351 125 RQIHLSKPVIAFATHD 140 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~ 140 (349)
..++..+++++.++..
T Consensus 90 ~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 90 AQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHHCCCEEEEECCC
Confidence 8889999999998875
No 350
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=24.20 E-value=6.1e+02 Score=23.95 Aligned_cols=48 Identities=23% Similarity=0.125 Sum_probs=32.8
Q ss_pred CCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-C---CHHHHHHHHHhh
Q 045351 227 RPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-F---DFGRMLKAVEEF 274 (349)
Q Consensus 227 ~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 274 (349)
+--+++...|+.+...+ ..+..+|.+|.++++-+. . ....+.+.+.+.
T Consensus 137 P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 190 (471)
T cd07139 137 PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEA 190 (471)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHc
Confidence 44567777787776666 457789999999998853 2 344555666554
No 351
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.16 E-value=1.9e+02 Score=25.23 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCCe-EecCCC
Q 045351 67 RIKTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGVV-VSPCNP 116 (349)
Q Consensus 67 ~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~-~v~i~~ 116 (349)
....+...|.+ .|+.+++.|.+++..+.. ...+.+.+...|.. +..++.
T Consensus 71 ~~~~~~~~~~~-~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~G 121 (281)
T PRK11493 71 RPETFAVAMRE-LGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAG 121 (281)
T ss_pred CHHHHHHHHHH-cCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCC
Confidence 35678888998 999999999999986543 33455666777854 344443
No 352
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=24.12 E-value=1.8e+02 Score=26.61 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=20.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhh
Q 045351 85 DVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHL 129 (349)
Q Consensus 85 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~ 129 (349)
-+|+..++...+. +...|..+..++...+.+.+...+..
T Consensus 99 ~~i~aVG~~Ta~a------L~~~G~~~~~~p~~~~~e~L~~~l~~ 137 (381)
T PRK07239 99 ARLLARGPKATGA------IRAAGLREEWSPASESSAEVLEYLLE 137 (381)
T ss_pred CeEEEECccHHHH------HHHcCCCCccCCCCCccHHHHHHHhc
Confidence 3455555443332 23567665555556666666665543
No 353
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=23.93 E-value=1.5e+02 Score=27.32 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=10.9
Q ss_pred CCCCCCceeeech-hhHHHHHh
Q 045351 196 GTTGMVKGALLTQ-RNLVAAVA 216 (349)
Q Consensus 196 GtTG~pK~v~~t~-~~l~~~~~ 216 (349)
|=||---|-+... +.+...+.
T Consensus 239 ~mtGwRvG~~v~~~~~l~~~~~ 260 (393)
T COG0436 239 GMTGWRIGWVVGPPEELIAALR 260 (393)
T ss_pred cccccceeEeecChHHHHHHHH
Confidence 3355555655555 55554444
No 354
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=23.81 E-value=5.2e+02 Score=22.95 Aligned_cols=60 Identities=15% Similarity=0.061 Sum_probs=42.9
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCC--eEecC--CCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGV--VVSPC--NPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~--~~v~i--~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
-+..||+|+-++ +|-....++..+...|. .++.. .|......+...|.+.+....+..+.
T Consensus 116 ~i~dg~~IlTh~-~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds 179 (301)
T COG1184 116 RIHDGDVILTHS-FSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS 179 (301)
T ss_pred hccCCCEEEEec-CcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech
Confidence 378899999888 67777777778887875 33333 46677778888888888655444443
No 355
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=23.78 E-value=1.6e+02 Score=23.13 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=37.7
Q ss_pred cCCEEEEcCCCCHHHHHHHHHhh-cccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCC
Q 045351 252 MGESLVCMGKFDFGRMLKAVEEF-RVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHL 314 (349)
Q Consensus 252 ~G~~~v~~~~~~~~~~~~~i~~~-~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l 314 (349)
.|.++.+-.+.+...+.+.|.+. ++|++.-.......|.+. +.++.++.||..-
T Consensus 19 ~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~---------~~~~vi~~GG~~~ 73 (161)
T PF00455_consen 19 DGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN---------PNIEVILLGGEVN 73 (161)
T ss_pred CCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc---------CceEEEEeCCEEE
Confidence 34444444566788888888877 888888888888887765 2466777777543
No 356
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=23.70 E-value=3.9e+02 Score=24.81 Aligned_cols=79 Identities=13% Similarity=0.046 Sum_probs=58.3
Q ss_pred eeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEE
Q 045351 204 ALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVV 280 (349)
Q Consensus 204 v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~ 280 (349)
..+|.+.+...+..+...+. .+.+++++....+-...+ +...++.+..|+..+..+ ...+..+-..+++.++.+++
T Consensus 27 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET-LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 35899988877766554432 167888888887754433 456788999999998884 56778888888999998887
Q ss_pred ech
Q 045351 281 LAP 283 (349)
Q Consensus 281 ~~P 283 (349)
...
T Consensus 106 ~~~ 108 (458)
T PRK09029 106 VLE 108 (458)
T ss_pred EcC
Confidence 654
No 357
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=23.31 E-value=1.7e+02 Score=24.51 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=26.3
Q ss_pred eeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc
Q 045351 59 ILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV 95 (349)
Q Consensus 59 ~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~ 95 (349)
=||.++.+|+.+.-..+.. ....+|++|+|+++.+.
T Consensus 150 ES~~~~~~Rv~~~l~~~~~-~~~~~~~~vlvVsHg~v 185 (228)
T PRK14119 150 ESLKDTLVRVIPFWTDHIS-QYLLDGQTVLVSAHGNS 185 (228)
T ss_pred CCHHHHHHHHHHHHHHHHH-hhccCCCeEEEEeChHH
Confidence 5788999999887777654 34456788888877443
No 358
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=23.24 E-value=2.9e+02 Score=26.69 Aligned_cols=57 Identities=9% Similarity=-0.037 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC--CHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC--TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~--~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|+.+....+-++-+..-.+|..++.+.... ..+.++..++.....+++.++
T Consensus 292 ~Gkrv~I~gd~~~a~~l~~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~~~i~~D 350 (519)
T PRK02910 292 TGKRVFVFGDATHAVAAARILSDELGFEVVGAGTYLREDARWVRAAAKEYGDEALITDD 350 (519)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHhcCCeEEEEecCCcchhHHHHHHHHhcCCCeEEecC
Confidence 577899998865555555555556898887664322 244556666666666666544
No 359
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=23.22 E-value=4.2e+02 Score=21.65 Aligned_cols=55 Identities=11% Similarity=0.081 Sum_probs=41.6
Q ss_pred CEEEEEcCCCchH----HHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 85 DVAFLLSQNSVRV----PVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 85 d~V~i~~~n~~~~----~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.+|++.+..+..+ .+....+-..|.-++.+.++.+.+++...+++.+|++|..+-
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~ 143 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSA 143 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 3566666554322 333344556799999999999999999999999999998875
No 360
>PRK09224 threonine dehydratase; Reviewed
Probab=23.20 E-value=4.6e+02 Score=25.23 Aligned_cols=91 Identities=11% Similarity=0.027 Sum_probs=56.0
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+.++.+-.++.+..-||+. +-..+++++ |.+ ....+| ++....+=....+.++|.++|..++.+-|...+....
T Consensus 34 g~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~-~~~~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~ 107 (504)
T PRK09224 34 GNQVLLKREDLQPVFSFKL-RGAYNKMAQ-LTE-EQLARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKV 107 (504)
T ss_pred CCEEEEEecCCCCCCCChH-HHHHHHHHh-hhH-HhcCCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 4456665554455557766 222333333 332 112222 3444556666777788899998766666666666666
Q ss_pred HHHhhcCCeEEEEcCcc
Q 045351 125 RQIHLSKPVIAFATHDT 141 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~~ 141 (349)
..++..+++++++.+..
T Consensus 108 ~~~r~~GA~Vi~~g~~~ 124 (504)
T PRK09224 108 DAVRAFGGEVVLHGDSF 124 (504)
T ss_pred HHHHhCCCEEEEECCCH
Confidence 78899999999997643
No 361
>PRK12483 threonine dehydratase; Reviewed
Probab=23.17 E-value=6e+02 Score=24.60 Aligned_cols=90 Identities=10% Similarity=0.019 Sum_probs=56.0
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.++.+..-||+. +-..+++.+...+ ...+| ++....+=....+.++|..+|..+..+-|...+..-..
T Consensus 52 ~~IylK~E~lqptGSfK~-RGA~n~i~~l~~~--~~~~G---VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~ 125 (521)
T PRK12483 52 NQVLLKREDLQPVFSFKI-RGAYNKMARLPAE--QLARG---VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVD 125 (521)
T ss_pred CEEEEEEcCCCCCCchHH-HHHHHHHHHhHHH--HhcCc---EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHH
Confidence 345554443344556743 2223344443322 23444 34445566667777888899987777767767777778
Q ss_pred HHhhcCCeEEEEcCcc
Q 045351 126 QIHLSKPVIAFATHDT 141 (349)
Q Consensus 126 ~l~~~~~~~i~~~~~~ 141 (349)
.++..+++++++.+..
T Consensus 126 ~~r~~GAeVil~g~~~ 141 (521)
T PRK12483 126 GVRAHGGEVVLHGESF 141 (521)
T ss_pred HHHHCCCEEEEECCCH
Confidence 8999999999997653
No 362
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=23.13 E-value=3.8e+02 Score=23.42 Aligned_cols=56 Identities=9% Similarity=-0.065 Sum_probs=35.5
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.++++|++|+|....+.--..+.--+...|+.++.+. .+.+. ...++..+++.++.
T Consensus 139 ~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~--~s~~~-~~~l~~~Ga~~vi~ 194 (329)
T cd08294 139 CKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCA--GSDDK-VAWLKELGFDAVFN 194 (329)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe--CCHHH-HHHHHHcCCCEEEe
Confidence 5789999999998755555455544556788655442 23333 44445577776664
No 363
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional
Probab=23.07 E-value=6.1e+02 Score=23.50 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=48.0
Q ss_pred eeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHh---hcCCeEE
Q 045351 59 ILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIH---LSKPVIA 135 (349)
Q Consensus 59 ~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~---~~~~~~i 135 (349)
+-|..-..+...+...+.+ ....++.|+++.....-.+.-.+...|..+..+...++.++-..+++ .-+.+++
T Consensus 234 ~~~~~~~~k~~~l~~ll~~----~~~~~~lVF~~t~~~~~~l~~~L~~~g~~v~~lhg~~~~~~R~~~l~~F~~g~~~vL 309 (423)
T PRK04837 234 LFYPSNEEKMRLLQTLIEE----EWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEEFTRGDLDIL 309 (423)
T ss_pred EEeCCHHHHHHHHHHHHHh----cCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCChhHHHHHHHHHHcCCCcEE
Confidence 4444445555555555554 23557777877554333333334456888888888888776666554 4477888
Q ss_pred EEcCcc
Q 045351 136 FATHDT 141 (349)
Q Consensus 136 ~~~~~~ 141 (349)
++.+..
T Consensus 310 VaTdv~ 315 (423)
T PRK04837 310 VATDVA 315 (423)
T ss_pred EEechh
Confidence 877643
No 364
>PRK06234 methionine gamma-lyase; Provisional
Probab=23.05 E-value=4.8e+02 Score=24.07 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCCchHHH-HHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPV-LYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~-~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-..... ...++-..|+.+..++.. ..+++...++. +.++|+++
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~ie 156 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYLE 156 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEEE
Confidence 5778877665442222222 223455677777777653 45666666543 45666654
No 365
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=23.00 E-value=1.5e+02 Score=29.21 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=35.5
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
..+...+.+ .|+.+++.|.++|..+...-.+++++-.+|..
T Consensus 209 ~el~~~~~~-~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 209 QDMPEILRD-LGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 456777777 99999999999999998888889999999975
No 366
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=22.91 E-value=6.7e+02 Score=23.90 Aligned_cols=91 Identities=13% Similarity=0.022 Sum_probs=61.1
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|.+-.. +| -.+|+..+...+.... .. .+++.+|++....|-.. .++..++..+..|...+..
T Consensus 194 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 194 PDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ER-LELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hh-cCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 5677765422 22 4678777765544333 33 56788999998887543 2445567777888877654
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+...++.+...+++.++.++.....
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~ 293 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTP 293 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHH
Confidence 4567888888999999998776543
No 367
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=22.89 E-value=7.2e+02 Score=24.29 Aligned_cols=103 Identities=14% Similarity=0.048 Sum_probs=69.1
Q ss_pred CCCCcEEEEec--cCCCCCCceeeechhhHHHHHhhhhcccc-CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYS--SGTTGMVKGALLTQRNLVAAVAGGHAVRA-ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.++++... .+++|. ...+|...+...+..+...+. .+.+++++...++-...+ +...++++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecC
Confidence 46677765432 112332 346899888877666544432 146889998888876433 35677899999998866
Q ss_pred CC-CC--HHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 GK-FD--FGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~~-~~--~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
+. +. ++.+...++..++..++..+.....+
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 32 22 67888999999999999887666543
No 368
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.85 E-value=3.4e+02 Score=25.47 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=55.5
Q ss_pred eechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEe
Q 045351 205 LLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 281 (349)
.+|...+...+..+...+. .+..++++....+-... .+...+..+..|+..+..+ ......+...+++.++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 4888988877666544332 14668888888875443 3356778888999888775 456777888888888888876
Q ss_pred ch
Q 045351 282 AP 283 (349)
Q Consensus 282 ~P 283 (349)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 369
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=22.84 E-value=3.1e+02 Score=25.47 Aligned_cols=80 Identities=13% Similarity=0.026 Sum_probs=56.7
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
.+.+-..+|.+...+.-+.+.. ..+.+.+-|.|-..-......+++|..-.|-.++.+.|......-.-.+ .+..-+
T Consensus 66 t~~~G~p~L~~aL~k~~se~~~-~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~m--aG~tpv 142 (420)
T KOG0257|consen 66 TRGYGLPQLRKALAKAYSEFYG-GLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVM--AGGTPV 142 (420)
T ss_pred cccCCchHHHHHHHHHHHHHhc-cccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhh--cCCcce
Confidence 4666777787776666666555 4566677788888877777779999999999999999988776554444 344444
Q ss_pred EEc
Q 045351 136 FAT 138 (349)
Q Consensus 136 ~~~ 138 (349)
++.
T Consensus 143 ~v~ 145 (420)
T KOG0257|consen 143 FVP 145 (420)
T ss_pred eec
Confidence 443
No 370
>PLN02356 phosphateglycerate kinase
Probab=22.78 E-value=5.3e+02 Score=24.18 Aligned_cols=91 Identities=10% Similarity=-0.098 Sum_probs=55.2
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.+..+..=||++ +-....+...+.+ -.+.+|.+|. ....+-.-+.+.++|...|..++.+-|...+.+...
T Consensus 68 ~~v~~KlE~~nPtGS~Kd-R~A~~~i~~a~~~-g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~ 144 (423)
T PLN02356 68 CEILGKCEFLNPGGSVKD-RVAVKIIEEALES-GQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQ 144 (423)
T ss_pred CEEEEEeccCCCCCCHHH-HHHHHHHHHHHhC-CccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHH
Confidence 345555553345555553 1111223333332 2344776655 333344477777888889987777766666667788
Q ss_pred HHhhcCCeEEEEcC
Q 045351 126 QIHLSKPVIAFATH 139 (349)
Q Consensus 126 ~l~~~~~~~i~~~~ 139 (349)
.++..++.+++++.
T Consensus 145 ~ir~~GAeVi~v~~ 158 (423)
T PLN02356 145 ILEALGATVERVRP 158 (423)
T ss_pred HHHHcCCEEEEECC
Confidence 99999999999853
No 371
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=22.73 E-value=3.7e+02 Score=22.29 Aligned_cols=70 Identities=11% Similarity=0.015 Sum_probs=48.6
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPE 122 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~ 122 (349)
..+++++. ..+...-.+.++.++++++.|.+ .| .+++.....=-+=...=++...|..++-+.|....++
T Consensus 15 ~~i~V~~g-s~~~~~~~~~~~~a~~lg~~la~-~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~~~ 84 (205)
T COG1611 15 RQIVVICG-SARGIEPEEYYELARELGRELAK-RG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLHEQ 84 (205)
T ss_pred ceEEEEEe-CCCCCCCHHHHHHHHHHHHHHHh-CC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCchhh
Confidence 45566665 12333444489999999999998 67 4555555555566667788899999999988776553
No 372
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=22.64 E-value=1.8e+02 Score=25.47 Aligned_cols=56 Identities=20% Similarity=0.183 Sum_probs=44.2
Q ss_pred ceeeHHHHHH-----HHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe
Q 045351 57 HRILYPDLTL-----RIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS 112 (349)
Q Consensus 57 ~~~Ty~~l~~-----~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 112 (349)
..+.|.++.+ ++......|.+..|+.+++.|.++|..+...-+.++|+-.+|..-.
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 4688888887 2333444444238999999999999999999999999999997655
No 373
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.41 E-value=3.4e+02 Score=26.08 Aligned_cols=82 Identities=10% Similarity=-0.043 Sum_probs=59.6
Q ss_pred eechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEe
Q 045351 205 LLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVL 281 (349)
Q Consensus 205 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~ 281 (349)
.+|...+...+..+...+. .+..++++...++-...+ +...++++..|+..+... .+....+...+++.+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 5788888777666554432 156789988888865443 456778888888877764 567888889999999999888
Q ss_pred chHHHH
Q 045351 282 APPVVL 287 (349)
Q Consensus 282 ~P~~l~ 287 (349)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 765443
No 374
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=22.31 E-value=1.2e+02 Score=20.11 Aligned_cols=26 Identities=12% Similarity=0.045 Sum_probs=22.1
Q ss_pred CCceeeHHHHHHHHHHHHHHHhhhcCC
Q 045351 55 SRHRILYPDLTLRIKTLAYSLKTKYKL 81 (349)
Q Consensus 55 ~~~~~Ty~~l~~~~~~~a~~L~~~~g~ 81 (349)
.|+.+|.+++.+.++++.+.+++ .|.
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~-~GY 52 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYRE-KGY 52 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHH-TT-
T ss_pred cCCCcCHHHHHHHHHHHHHHHHH-cCc
Confidence 47999999999999999999998 774
No 375
>PHA02518 ParA-like protein; Provisional
Probab=22.30 E-value=2.3e+02 Score=23.02 Aligned_cols=85 Identities=21% Similarity=0.187 Sum_probs=45.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCc-eeeHHHHHHH----------HHHHHHHHhhhcCCCCCCEEEEEcCCCch
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRH-RILYPDLTLR----------IKTLAYSLKTKYKLSKYDVAFLLSQNSVR 96 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~-~~Ty~~l~~~----------~~~~a~~L~~~~g~~~gd~V~i~~~n~~~ 96 (349)
.|+.-.+...+ .+. +.+++++|-+... ..+|.+.... ...+...|.+ . ....|.|.+.+|.+..
T Consensus 15 TT~a~~la~~l--a~~-g~~vlliD~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~-~~~~d~viiD~p~~~~ 89 (211)
T PHA02518 15 TTVATNLASWL--HAD-GHKVLLVDLDPQGSSTDWAEAREEGEPLIPVVRMGKSIRADLPK-V-ASGYDYVVVDGAPQDS 89 (211)
T ss_pred HHHHHHHHHHH--HhC-CCeEEEEeCCCCCChHHHHHhcccCCCCCchhhccHHHHHHHHH-H-hccCCEEEEeCCCCcc
Confidence 45566666666 566 7889999875332 2222211110 0122333332 2 1345777777777655
Q ss_pred HHHHHHHHHhcCCeEecCCCCC
Q 045351 97 VPVLYLSLFSLGVVVSPCNPSC 118 (349)
Q Consensus 97 ~~~~~lA~~~~G~~~v~i~~~~ 118 (349)
.. ..-++..+..+++|+.|..
T Consensus 90 ~~-~~~~l~~aD~viip~~ps~ 110 (211)
T PHA02518 90 EL-ARAALRIADMVLIPVQPSP 110 (211)
T ss_pred HH-HHHHHHHCCEEEEEeCCCh
Confidence 44 4456666777777776654
No 376
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=22.25 E-value=1.1e+02 Score=22.66 Aligned_cols=55 Identities=9% Similarity=0.092 Sum_probs=40.8
Q ss_pred eHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHH--HHHHhc-CCeEecC
Q 045351 60 LYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLY--LSLFSL-GVVVSPC 114 (349)
Q Consensus 60 Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~--lA~~~~-G~~~v~i 114 (349)
|-.++.+.+..+-..+.++.++.+.|.|.+...-..+.-.++ .|+-.. |+..+|+
T Consensus 14 t~e~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~~~~~Vpl 71 (117)
T cd02185 14 TAEEILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPAKAARELGGWKYVPL 71 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChHHHHHhcCCCCCcce
Confidence 567899999999988877689999999999877665554444 666666 4435555
No 377
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=22.23 E-value=99 Score=19.64 Aligned_cols=22 Identities=9% Similarity=-0.132 Sum_probs=18.1
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCC
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNS 94 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~ 94 (349)
..+|.+ .|+..|+.|-|-..++
T Consensus 30 G~WL~~-aGF~~G~~v~V~v~~g 51 (57)
T PF08845_consen 30 GKWLEE-AGFTIGDPVKVRVMPG 51 (57)
T ss_pred hhhhHH-hCCCCCCEEEEEEECC
Confidence 678888 9999999998876544
No 378
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=22.20 E-value=7.9e+02 Score=24.47 Aligned_cols=103 Identities=9% Similarity=-0.036 Sum_probs=70.1
Q ss_pred CCCCcEEEEe--ccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 184 SLSDPAAILY--SSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 184 ~~~~~~~i~~--TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
.++.+++... ..|..|. -..+|.+.+...+..+...+ + +.+++++...++-..-. +...++++..|+..|-
T Consensus 55 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~G-v~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGP--YMWKTYKEVYEEVLQIGSALRASG-AEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVP 130 (660)
T ss_pred CCCCceEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEE
Confidence 4566665432 1233332 23468888887776654443 4 68899988888865443 2456788899988887
Q ss_pred c-CCCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 259 M-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 259 ~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
. +.+.++.+...++..+++.++.....+..++
T Consensus 131 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 131 LYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred eccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 7 4678899999999999999998776544444
No 379
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=22.15 E-value=6.2e+02 Score=23.24 Aligned_cols=107 Identities=10% Similarity=0.010 Sum_probs=59.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC---CC----CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT---AS----RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVP 98 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~ 98 (349)
.++.++++-.. +.. -+..+++.. .+ +-.+|+..+...+..++..+.- ...+.|++..+.|-.. .+.
T Consensus 80 ~~~~~~~~~~~--~~~-~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~~~dr~l~~~Pl~h~~g~~ 154 (386)
T TIGR02372 80 RRIGEWVDLIA--HHS-TPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGE--RPPPVRRVISCVPAHHLYGFL 154 (386)
T ss_pred ccHHHHHHHHH--hcC-CCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCc--CCCCCCeEEEeCCcHHHHHHH
Confidence 56666666544 333 334444432 22 2578999998887777665431 2234467877777542 233
Q ss_pred HHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 99 VLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 99 ~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
..++..+..|+.++... ..++..+...++.. .+++......
T Consensus 155 ~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l 195 (386)
T TIGR02372 155 FSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIW 195 (386)
T ss_pred HHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHH
Confidence 44566677898887665 34555544444332 4555444433
No 380
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=22.04 E-value=3.4e+02 Score=23.89 Aligned_cols=56 Identities=4% Similarity=-0.097 Sum_probs=35.9
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.++++|++|+|....+.-..+..+|....|+.++.+.. +.+.... +++.+.+.++.
T Consensus 158 ~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~--~~~~~~~-~~~~g~~~v~~ 213 (338)
T PRK09422 158 SGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDI--NDDKLAL-AKEVGADLTIN 213 (338)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeC--ChHHHHH-HHHcCCcEEec
Confidence 67899999999986556666666666555877665532 3334333 36666665554
No 381
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=21.95 E-value=3.9e+02 Score=25.77 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC--CHHHHHHHHhhcCCeEEEEc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC--TIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~--~~~~l~~~l~~~~~~~i~~~ 138 (349)
.|.+|+|+.+....+-++-+..--+|..++...... ..+.++..++.....+++.+
T Consensus 304 ~Gkrv~I~gd~~~a~~l~~~L~~ELGm~vv~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 361 (513)
T CHL00076 304 TGKKAVVFGDATHAASMTKILAREMGIRVSCAGTYCKHDAEWFKEQVQGFCDEILITD 361 (513)
T ss_pred CCCEEEEEcCchHHHHHHHHHHHhCCCEEEEecCcccchhHHHHHHHHHhccCcEEec
Confidence 578999998876666666666678899887554322 13333444444444555544
No 382
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=21.88 E-value=3.5e+02 Score=25.19 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=42.9
Q ss_pred cCCCCCCEEEEEcCCCchHH----HHHH--HHHhcCCeE---ecCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 79 YKLSKYDVAFLLSQNSVRVP----VLYL--SLFSLGVVV---SPCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~----~~~l--A~~~~G~~~---v~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
..+++||.|.+..+..+-.- ..++ .+.+.|+.+ +-.+.+-+.+++..+++..+|++++--..
T Consensus 314 i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHg 384 (422)
T TIGR00649 314 IRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHG 384 (422)
T ss_pred EEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCC
Confidence 34678999988885444222 2223 256788854 34567778999999999999998875443
No 383
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=21.86 E-value=5.2e+02 Score=23.59 Aligned_cols=90 Identities=8% Similarity=0.034 Sum_probs=56.3
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+.++.+-.+..+..-||++ +-....+.. +.+ .+..+ -++....+=.-..+.++|.+.|..+..+-|...+....
T Consensus 14 g~~i~~K~E~~~ptgS~K~-R~a~~~i~~-~~~-~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~ 87 (380)
T TIGR01127 14 GSEVYLKLENLQKTGSFKI-RGALNKIAN-LSE-DQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKV 87 (380)
T ss_pred CCeEEEEecCCCCCCCcHH-HHHHHHHHh-cch-hccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHH
Confidence 3455555554445566665 222222322 333 34332 23444556666777788889998777777777777778
Q ss_pred HHHhhcCCeEEEEcCc
Q 045351 125 RQIHLSKPVIAFATHD 140 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~ 140 (349)
..++..++++++++..
T Consensus 88 ~~~~~~GA~V~~~~~~ 103 (380)
T TIGR01127 88 KATKSYGAEVILHGDD 103 (380)
T ss_pred HHHHHCCCEEEEECCC
Confidence 8899999999998754
No 384
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=21.82 E-value=6.7e+02 Score=23.54 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=34.4
Q ss_pred CCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-C---CHHHHHHHHHhh
Q 045351 227 RPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-F---DFGRMLKAVEEF 274 (349)
Q Consensus 227 ~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 274 (349)
+--+++...|+.+...+ ..+..+|.+|.++++-+. . ....+.+.+.+.
T Consensus 117 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 170 (454)
T cd07109 117 PHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEA 170 (454)
T ss_pred eeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 44588888888777655 467799999999998853 2 345566666664
No 385
>TIGR03877 thermo_KaiC_1 KaiC domain protein, Ph0284 family. Members of this family contain a single copy of the KaiC domain (pfam06745) that occurs in two copies of the circadian clock protein kinase KaiC itself. Members occur primarily in thermophilic archaea and in Thermotoga.
Probab=21.71 E-value=2.5e+02 Score=23.67 Aligned_cols=54 Identities=7% Similarity=-0.111 Sum_probs=38.4
Q ss_pred cCCCCCCEEEEEcCCCchH--HHH--HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCC
Q 045351 79 YKLSKYDVAFLLSQNSVRV--PVL--YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKP 132 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~--~~~--~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 132 (349)
-|+.+|..++|.++++.-- +.. +...++.|-.++.+....+++++.+.++..+.
T Consensus 16 GG~~~gs~~lI~G~pGsGKT~la~~~l~~~~~~ge~~lyvs~ee~~~~i~~~~~~~g~ 73 (237)
T TIGR03877 16 GGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQVRRNMAQFGW 73 (237)
T ss_pred CCCcCCeEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEEeeCCHHHHHHHHHHhCC
Confidence 5999999999999988622 222 23334678788888888888888777665443
No 386
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=21.51 E-value=5.1e+02 Score=24.88 Aligned_cols=91 Identities=8% Similarity=-0.023 Sum_probs=55.8
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
..++.+-.++.+..-||+. +-..+++++ |.+ ....+| ++....+=....+.++|.++|..++.+-|...+....
T Consensus 31 g~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~-~~~~~g---VV~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv 104 (499)
T TIGR01124 31 GNRILIKREDLQPVFSFKL-RGAYNKMAQ-LSP-EQKARG---VIAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKV 104 (499)
T ss_pred CCEEEEEecCCCCCCCCHH-HHHHHHHHH-hhH-HhcCCE---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 3456665554445557776 222333333 322 112222 2334555566667778889998777776777777777
Q ss_pred HHHhhcCCeEEEEcCcc
Q 045351 125 RQIHLSKPVIAFATHDT 141 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~~ 141 (349)
..++..+++++++....
T Consensus 105 ~~~r~~GA~Vvl~g~~~ 121 (499)
T TIGR01124 105 DAVRGFGGEVVLHGANF 121 (499)
T ss_pred HHHHhCCCEEEEeCcCH
Confidence 88999999999987543
No 387
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=21.45 E-value=4.6e+02 Score=24.59 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=17.3
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+.+.|+.+..++.. ..++++..++. +.++|++.
T Consensus 124 l~~~Gi~v~~vd~~-d~~~l~~~i~~-~TklV~~e 156 (433)
T PRK08134 124 LRRFGIETTFVKPG-DIDGWRAAIRP-NTRLLFGE 156 (433)
T ss_pred HhhCCeEEEEECCC-CHHHHHHhcCC-CCeEEEEE
Confidence 34566666666543 45555555542 34555544
No 388
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=21.41 E-value=6.7e+02 Score=23.37 Aligned_cols=49 Identities=16% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-C---CHHHHHHHHHhh
Q 045351 226 SRPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-F---DFGRMLKAVEEF 274 (349)
Q Consensus 226 ~~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 274 (349)
.+--+++...|+.+...+ ..+..+|.+|.++|+-+. . ....+.+.+.+.
T Consensus 97 ~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~a 151 (432)
T cd07105 97 EPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEA 151 (432)
T ss_pred ecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHc
Confidence 344567777787766554 567799999999998853 2 345555666654
No 389
>PRK07476 eutB threonine dehydratase; Provisional
Probab=21.41 E-value=5.1e+02 Score=23.03 Aligned_cols=51 Identities=10% Similarity=0.090 Sum_probs=38.4
Q ss_pred EcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 90 LSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 90 ~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
....+=.-..+-++|.+.|..+..+-|...++.....++..++++++++..
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 72 TASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred EECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 335555666777788889987666666666667778889999999999864
No 390
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.33 E-value=3.2e+02 Score=23.36 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=27.7
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR 96 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~ 96 (349)
.-+|.+++.+++.++|+.+.+.++- .+.|.|+.-++--
T Consensus 56 vLis~~~I~~rI~~LA~~I~~dy~~--~~~vilgILkGg~ 93 (241)
T PTZ00149 56 ILLPNGLIKDRVEKLAYDIKQVYGN--EELHILCILKGSR 93 (241)
T ss_pred EEeCHHHHHHHHHHHHHHHHHHcCC--CCeEEEEECCCCH
Confidence 4699999999999999999985552 2345555555544
No 391
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=21.25 E-value=4.8e+02 Score=21.67 Aligned_cols=83 Identities=14% Similarity=0.069 Sum_probs=54.6
Q ss_pred CceeeHHHHHHHHHHHHHHH-------hhhcC-C-CCCCEEEEEcCCCch----HHHHHHHHHhcCCeEecCCCCCCHHH
Q 045351 56 RHRILYPDLTLRIKTLAYSL-------KTKYK-L-SKYDVAFLLSQNSVR----VPVLYLSLFSLGVVVSPCNPSCTIPE 122 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L-------~~~~g-~-~~gd~V~i~~~n~~~----~~~~~lA~~~~G~~~v~i~~~~~~~~ 122 (349)
...++=.|.+-.++.+...+ .. .. - ....+|++.+..+.. ..+.-..+-..|.-++-+..+.+.++
T Consensus 52 ~gei~vaqe~~as~~~~~~l~~l~~~l~~-~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 52 AGKMFLPQVLKSARVMKAAVAYLEPYMEK-EKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhh-ccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 35566666665544444333 22 22 1 123466666665533 23344445568999999999999999
Q ss_pred HHHHHhhcCCeEEEEcC
Q 045351 123 ILRQIHLSKPVIAFATH 139 (349)
Q Consensus 123 l~~~l~~~~~~~i~~~~ 139 (349)
+...+++.+|++|..+.
T Consensus 131 ~v~~~~~~~~~~V~lS~ 147 (213)
T cd02069 131 ILEAAKEHKADIIGLSG 147 (213)
T ss_pred HHHHHHHcCCCEEEEcc
Confidence 99999999999998874
No 392
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=21.14 E-value=4.3e+02 Score=25.01 Aligned_cols=69 Identities=10% Similarity=-0.013 Sum_probs=46.8
Q ss_pred CceeeHHHHHHHHHHH--------------H-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHH-HHhcCCeEecC--C--
Q 045351 56 RHRILYPDLTLRIKTL--------------A-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS-LFSLGVVVSPC--N-- 115 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~--------------a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~i--~-- 115 (349)
+..-||.+|.+.+..+ | +.+.. .++++||.| .+..++...-+ +...|++++=+ +
T Consensus 68 ag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~-l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea 141 (450)
T TIGR02618 68 AGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQ-IAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEA 141 (450)
T ss_pred cCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHH-hCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccc
Confidence 3566899998886544 3 33444 789999977 34666666666 67888866655 2
Q ss_pred ----------CCCCHHHHHHHHhhc
Q 045351 116 ----------PSCTIPEILRQIHLS 130 (349)
Q Consensus 116 ----------~~~~~~~l~~~l~~~ 130 (349)
..++.+.++..+...
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccc
Confidence 234788888888754
No 393
>PRK07050 cystathionine beta-lyase; Provisional
Probab=21.04 E-value=5.1e+02 Score=23.85 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=11.5
Q ss_pred CCCceeeec-hhhHHHHHhhhhc
Q 045351 199 GMVKGALLT-QRNLVAAVAGGHA 220 (349)
Q Consensus 199 G~pK~v~~t-~~~l~~~~~~~~~ 220 (349)
+.+-|.+++ .+.+...++....
T Consensus 218 ~~~gG~v~~~~~~~~~~~~~~~~ 240 (394)
T PRK07050 218 DVLMGATITADAELHAKLKLARM 240 (394)
T ss_pred CeeEEEEEECCHHHHHHHHHHHH
Confidence 335665554 4556555554443
No 394
>PRK13690 hypothetical protein; Provisional
Probab=20.97 E-value=1.9e+02 Score=23.23 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=28.7
Q ss_pred eHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC
Q 045351 60 LYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS 94 (349)
Q Consensus 60 Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~ 94 (349)
.+.++.+++.++...|.++.++++||.+.+=+..|
T Consensus 2 ~~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 2 DLEEIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 46788999999999988878999999888766544
No 395
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.92 E-value=8e+02 Score=24.07 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=66.4
Q ss_pred CCCCcEEEEec--cCCCCCCceeeechhhHHHHHhhhhccccC-CCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc-
Q 045351 184 SLSDPAAILYS--SGTTGMVKGALLTQRNLVAAVAGGHAVRAA-RSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM- 259 (349)
Q Consensus 184 ~~~~~~~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~- 259 (349)
.++.++++... ++..|. ...+|.+.+...+..+...+.. +.++|++...++-...+ +...++++..|+..+-+
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~ 110 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLF 110 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeC
Confidence 45666665432 122222 3467999888776665444321 46789988888865433 34677888999987765
Q ss_pred CCCC---HHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 GKFD---FGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~~~~---~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
.... ...+...++..++..++........+
T Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 143 (631)
T PRK07769 111 DPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGV 143 (631)
T ss_pred CCCccchHHHHHHHHHhCCCCEEEEChHHHHHH
Confidence 3222 46788888999999998887665443
No 396
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=20.90 E-value=7.1e+02 Score=23.44 Aligned_cols=57 Identities=9% Similarity=-0.099 Sum_probs=37.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC-TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|.......+-++-+.+..+|..++.+.... ..+.+...++.....-+++++
T Consensus 316 ~gkrvai~~~~~~~~~~~~~ll~elGm~v~~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 373 (443)
T TIGR01862 316 QGKRVCLYIGGSRLWHWIGSAEEDLGMEVVAVGYEFAHEDDYEKTMKRMGEGTLLIDD 373 (443)
T ss_pred cCCeEEEECCchhHHHHHHHHHHHCCCEEEEeccccccHHHHHHHHHhCCCceEEecC
Confidence 578999987766555555556668999988886554 455566666665554444444
No 397
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=20.76 E-value=7e+02 Score=23.33 Aligned_cols=67 Identities=19% Similarity=0.035 Sum_probs=47.2
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe--cCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS--PCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v--~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
...+.+ ..-=+|-+|+.+.+-..+..+.+..+..+|+-+. ..||..+++++...|...+..+.-...
T Consensus 25 ~~~~~~-~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a~~~ 93 (413)
T cd00401 25 REEYGA-SKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFAWKG 93 (413)
T ss_pred HHHhhc-cCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEEEcC
Confidence 334443 3334688999999999999999989999998644 335777888887777776666554433
No 398
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.61 E-value=91 Score=26.02 Aligned_cols=36 Identities=8% Similarity=-0.117 Sum_probs=24.3
Q ss_pred HHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 101 YLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+=++..+|+.+++|.+..+.+.+..+++.. +-++..
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~i--dGlll~ 65 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRI--DGLLLP 65 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCS--SEEEE-
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhc--CEEEEc
Confidence 345677899999999999999999999866 445443
No 399
>PRK06437 hypothetical protein; Provisional
Probab=20.50 E-value=2.3e+02 Score=18.44 Aligned_cols=49 Identities=16% Similarity=0.169 Sum_probs=34.0
Q ss_pred CCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcC
Q 045351 21 IAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQ 92 (349)
Q Consensus 21 ~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~ 92 (349)
.+++. ..|+.+++...- - . ++.+|+.-+ ++-+. .+ .-++.||+|.++..
T Consensus 15 ~~i~~-~~tv~dLL~~Lg--i-~-~~~vaV~vN--g~iv~---------------~~-~~L~dgD~Veiv~~ 63 (67)
T PRK06437 15 IEIDH-ELTVNDIIKDLG--L-D-EEEYVVIVN--GSPVL---------------ED-HNVKKEDDVLILEV 63 (67)
T ss_pred EEcCC-CCcHHHHHHHcC--C-C-CccEEEEEC--CEECC---------------Cc-eEcCCCCEEEEEec
Confidence 44544 478999888755 3 4 678888765 66654 44 67889999988753
No 400
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=20.46 E-value=4.5e+02 Score=23.04 Aligned_cols=56 Identities=11% Similarity=-0.026 Sum_probs=35.3
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 79 YKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
.++++|++|+|....+ .-..+..+ +...|+.++.+. .+.+.. ..++..+++.++..
T Consensus 134 ~~~~~g~~VLI~ga~g~vG~~aiql-Ak~~G~~Vi~~~--~s~~~~-~~~~~lGa~~vi~~ 190 (325)
T TIGR02825 134 CGVKGGETVMVNAAAGAVGSVVGQI-AKLKGCKVVGAA--GSDEKV-AYLKKLGFDVAFNY 190 (325)
T ss_pred hCCCCCCEEEEeCCccHHHHHHHHH-HHHcCCEEEEEe--CCHHHH-HHHHHcCCCEEEec
Confidence 6799999999998655 55554444 455787655432 234443 34466777776643
No 401
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=20.46 E-value=6.1e+02 Score=22.54 Aligned_cols=77 Identities=12% Similarity=0.036 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 61 YPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 61 y~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
|....+...++...+.+-+|..+.+ +++...++.+. ..++.+...-|-.++..++..........++..+.+++.++
T Consensus 27 ~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 27 SPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 4444444555555555534664444 44444554444 44444555667655554443333334556677777777764
No 402
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=20.41 E-value=99 Score=25.78 Aligned_cols=30 Identities=13% Similarity=-0.025 Sum_probs=21.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
..-++||.++|+.+|..+.+-.++..+.+.
T Consensus 40 l~Y~pGD~l~V~P~N~~~~V~~~l~~lgl~ 69 (219)
T PF00667_consen 40 LSYQPGDHLGVYPPNDPEEVERLLKRLGLD 69 (219)
T ss_dssp G---TT-EEEEE-SSEHHHHHHHHHHHTSG
T ss_pred CcccCCCEEEEEccCCHHHHHHHHHHhCCC
Confidence 445899999999999999999998876553
No 403
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=20.28 E-value=5.8e+02 Score=22.19 Aligned_cols=93 Identities=6% Similarity=-0.135 Sum_probs=56.7
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEI 123 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l 123 (349)
+.++.+-.+..+..=||+.-- ....+.. +.+ .| ..+|+.|+. ...+-.-..+-++|.++|..+..+-|...+...
T Consensus 16 g~~i~~K~E~~~ptgS~K~R~-a~~~l~~-a~~-~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k 91 (291)
T cd01561 16 GAEIYAKLEFFNPGGSVKDRI-ALYMIED-AEK-RGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEK 91 (291)
T ss_pred CCeEEEEecccCCCCcchHHH-HHHHHHH-HHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHH
Confidence 345556555333334444322 2222333 333 34 335666544 566666777777888899876666666555666
Q ss_pred HHHHhhcCCeEEEEcCcc
Q 045351 124 LRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 124 ~~~l~~~~~~~i~~~~~~ 141 (349)
...++..++++++++...
T Consensus 92 ~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 92 RKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHHHcCCEEEEeCCCC
Confidence 788899999999998753
No 404
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=20.25 E-value=4.7e+02 Score=25.27 Aligned_cols=47 Identities=11% Similarity=-0.008 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCC----HHHHHHHHhhc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCT----IPEILRQIHLS 130 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~----~~~l~~~l~~~ 130 (349)
.|.+|+|+++....+-++-+-. .+|+.++.+-.... .++++.+++.+
T Consensus 362 ~GKrvaI~gdpd~~~~l~~fL~-ElGmepv~v~~~~~~~~~~~~l~~ll~~~ 412 (515)
T TIGR01286 362 HGKRFAIYGDPDFVMGLVRFVL-ELGCEPVHILCTNGTKRWKAEMKALLAAS 412 (515)
T ss_pred cCceEEEECCHHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhcC
Confidence 5889999987654444444443 79998766644433 34455555543
No 405
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=20.21 E-value=3.2e+02 Score=19.11 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC
Q 045351 84 YDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC 118 (349)
Q Consensus 84 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~ 118 (349)
.|.|.+.+|.+...... -+...+..+++|+++..
T Consensus 40 ~d~viiD~p~~~~~~~~-~~l~~ad~viv~~~~~~ 73 (104)
T cd02042 40 YDYIIIDTPPSLGLLTR-NALAAADLVLIPVQPSP 73 (104)
T ss_pred CCEEEEeCcCCCCHHHH-HHHHHCCEEEEeccCCH
Confidence 56777888777655433 55666777788887654
No 406
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=20.01 E-value=7e+02 Score=23.07 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC-CCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN-PSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~-~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|..+....+-++- .+..+|..++.+. +....+..+.+.+..+...+++++
T Consensus 286 ~gkrv~i~~~~~~~~~la~-~l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 342 (410)
T cd01968 286 EGKKAALYTGGVKSWSLVS-ALQDLGMEVVATGTQKGTKEDYERIKELLGEGTVIVDD 342 (410)
T ss_pred CCCEEEEEcCCchHHHHHH-HHHHCCCEEEEEecccCCHHHHHHHHHHhCCCcEEEeC
Confidence 4889999887666555554 4568999877774 334455555555555544444443
Done!