Query 045351
Match_columns 349
No_of_seqs 150 out of 1249
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 21:59:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 2.7E-47 9.3E-52 362.8 30.4 316 11-340 6-338 (536)
2 3rix_A Luciferase, luciferin 4 100.0 6.2E-47 2.1E-51 361.4 28.7 326 9-342 3-350 (550)
3 3g7s_A Long-chain-fatty-acid-- 100.0 1.5E-46 5.2E-51 358.7 24.8 315 12-341 5-344 (549)
4 3tsy_A Fusion protein 4-coumar 100.0 2.3E-45 7.9E-50 372.1 29.2 325 4-339 38-384 (979)
5 2d1s_A Luciferase, luciferin 4 100.0 6.5E-45 2.2E-49 347.1 30.0 316 11-341 9-351 (548)
6 3r44_A Fatty acyl COA syntheta 100.0 5E-46 1.7E-50 352.5 21.9 300 28-340 16-323 (517)
7 3fce_A D-alanine--poly(phospho 100.0 2.2E-45 7.6E-50 347.9 23.9 296 28-340 1-302 (512)
8 1mdb_A 2,3-dihydroxybenzoate-A 100.0 9.6E-45 3.3E-49 345.4 28.4 294 28-336 25-334 (539)
9 1t5h_X 4-chlorobenzoyl COA lig 100.0 8E-45 2.7E-49 343.4 27.0 298 28-337 2-309 (504)
10 3o83_A Peptide arylation enzym 100.0 8.1E-45 2.8E-49 346.3 25.7 297 28-338 30-345 (544)
11 3t5a_A Long-chain-fatty-acid-- 100.0 2.1E-45 7.3E-50 345.5 21.3 295 28-342 24-359 (480)
12 4dg8_A PA1221; ANL superfamily 100.0 7.4E-44 2.5E-48 343.6 29.6 285 27-338 26-315 (620)
13 4gr5_A Non-ribosomal peptide s 100.0 9.1E-44 3.1E-48 340.9 29.3 287 27-338 74-365 (570)
14 1v25_A Long-chain-fatty-acid-C 100.0 4.6E-44 1.6E-48 340.8 26.5 300 28-341 18-333 (541)
15 3e7w_A D-alanine--poly(phospho 100.0 3.8E-44 1.3E-48 339.3 25.7 295 28-340 1-301 (511)
16 1pg4_A Acetyl-COA synthetase; 100.0 4.4E-44 1.5E-48 347.7 26.3 301 29-342 77-423 (652)
17 2v7b_A Benzoate-coenzyme A lig 100.0 1.9E-43 6.7E-48 335.9 29.6 297 29-341 25-341 (529)
18 4fuq_A Malonyl COA synthetase; 100.0 5.7E-44 2E-48 337.3 25.5 296 32-339 4-307 (503)
19 1ry2_A Acetyl-coenzyme A synth 100.0 1.7E-43 5.7E-48 343.9 29.5 309 29-343 83-430 (663)
20 1amu_A GRSA, gramicidin synthe 100.0 1E-43 3.6E-48 339.6 27.0 289 27-340 38-331 (563)
21 3etc_A AMP-binding protein; ad 100.0 6.4E-43 2.2E-47 335.2 30.9 308 27-341 54-382 (580)
22 3ipl_A 2-succinylbenzoate--COA 100.0 1.7E-43 5.7E-48 334.2 26.1 302 28-343 1-316 (501)
23 3ivr_A Putative long-chain-fat 100.0 6.4E-43 2.2E-47 330.8 28.2 294 28-340 6-310 (509)
24 3l8c_A D-alanine--poly(phospho 100.0 2.6E-43 8.9E-48 334.5 24.5 294 28-340 4-305 (521)
25 3rg2_A Enterobactin synthase c 100.0 1.3E-42 4.4E-47 335.8 29.5 299 27-338 26-340 (617)
26 3kxw_A Saframycin MX1 syntheta 100.0 1.6E-43 5.6E-48 340.9 22.9 300 28-342 11-337 (590)
27 3c5e_A Acyl-coenzyme A synthet 100.0 4.2E-42 1.4E-46 329.0 27.9 295 29-339 39-361 (570)
28 3gqw_A Fatty acid AMP ligase; 100.0 1E-41 3.5E-46 327.4 21.4 299 28-341 21-346 (576)
29 2vsq_A Surfactin synthetase su 100.0 6E-41 2.1E-45 348.0 28.6 288 28-338 464-759 (1304)
30 3ite_A SIDN siderophore synthe 100.0 3.2E-41 1.1E-45 322.9 21.5 295 27-339 19-333 (562)
31 3nyq_A Malonyl-COA ligase; A/B 100.0 8E-41 2.8E-45 315.8 22.5 284 28-339 22-311 (505)
32 4gs5_A Acyl-COA synthetase (AM 99.9 1.4E-25 4.8E-30 202.2 10.2 153 185-342 36-189 (358)
33 3hgu_A EHPF; phenazine, antibi 99.9 7.8E-23 2.7E-27 185.4 9.4 155 182-339 87-272 (369)
34 2y27_A Phenylacetate-coenzyme 99.9 4.2E-22 1.4E-26 184.6 13.7 157 182-340 86-250 (437)
35 3qov_A Phenylacetate-coenzyme 99.9 2.1E-22 7.2E-27 186.6 11.5 156 183-340 82-246 (436)
36 2y4o_A Phenylacetate-coenzyme 99.9 6.4E-22 2.2E-26 183.7 12.7 157 182-340 88-252 (443)
37 2y27_A Phenylacetate-coenzyme 93.8 0.49 1.7E-05 42.8 11.1 95 45-141 89-192 (437)
38 2y4o_A Phenylacetate-coenzyme 93.1 0.58 2E-05 42.4 10.4 95 45-141 91-194 (443)
39 3qov_A Phenylacetate-coenzyme 91.9 0.97 3.3E-05 40.8 10.2 94 46-141 86-188 (436)
40 3hgu_A EHPF; phenazine, antibi 85.1 3.4 0.00012 36.2 8.6 84 57-143 109-217 (369)
41 2d1s_A Luciferase, luciferin 4 82.3 8.8 0.0003 35.7 10.5 95 45-142 191-294 (548)
42 3ipl_A 2-succinylbenzoate--COA 79.0 18 0.00062 33.0 11.4 94 45-143 162-263 (501)
43 3rix_A Luciferase, luciferin 4 76.0 14 0.00047 34.3 9.7 95 45-141 189-291 (550)
44 3o83_A Peptide arylation enzym 76.0 29 0.001 32.0 12.0 92 45-141 190-291 (544)
45 1mdb_A 2,3-dihydroxybenzoate-A 75.7 31 0.001 31.9 12.0 92 45-141 181-282 (539)
46 3g7s_A Long-chain-fatty-acid-- 74.6 28 0.00095 32.2 11.4 106 183-291 31-140 (549)
47 3ivr_A Putative long-chain-fat 74.3 20 0.0007 32.7 10.3 96 183-289 18-117 (509)
48 3ni2_A 4-coumarate:COA ligase; 72.9 20 0.00068 33.1 9.9 98 183-289 34-135 (536)
49 1v25_A Long-chain-fatty-acid-C 72.5 35 0.0012 31.5 11.5 101 183-290 30-134 (541)
50 3ezx_A MMCP 1, monomethylamine 72.1 33 0.0011 27.4 9.8 90 229-321 94-194 (215)
51 3r44_A Fatty acyl COA syntheta 71.8 38 0.0013 31.1 11.5 92 45-142 169-269 (517)
52 3e7w_A D-alanine--poly(phospho 68.6 24 0.00081 32.3 9.3 93 45-141 142-244 (511)
53 3fce_A D-alanine--poly(phospho 68.5 22 0.00075 32.5 9.1 94 45-142 143-246 (512)
54 3t5a_A Long-chain-fatty-acid-- 68.5 35 0.0012 30.7 10.5 109 182-292 35-149 (480)
55 1ry2_A Acetyl-coenzyme A synth 67.8 36 0.0012 32.4 10.7 97 183-284 94-195 (663)
56 1t5h_X 4-chlorobenzoyl COA lig 67.2 49 0.0017 30.1 11.2 92 45-141 152-254 (504)
57 3c5e_A Acyl-coenzyme A synthet 67.1 38 0.0013 31.5 10.6 94 45-142 205-308 (570)
58 3kxw_A Saframycin MX1 syntheta 66.3 22 0.00076 33.1 8.8 91 45-139 166-268 (590)
59 4b2g_A GH3-1 auxin conjugating 65.3 1.6 5.6E-05 41.1 0.7 31 183-213 96-127 (609)
60 1amu_A GRSA, gramicidin synthe 64.2 48 0.0016 30.8 10.6 96 183-289 51-150 (563)
61 3rg2_A Enterobactin synthase c 64.2 75 0.0026 29.8 12.1 91 45-140 183-283 (617)
62 4fuq_A Malonyl COA synthetase; 62.4 52 0.0018 30.0 10.3 94 184-285 13-110 (503)
63 1pg4_A Acetyl-COA synthetase; 60.6 63 0.0022 30.6 10.9 95 184-283 89-187 (652)
64 4gr5_A Non-ribosomal peptide s 60.3 52 0.0018 30.5 10.1 92 45-141 213-313 (570)
65 3etc_A AMP-binding protein; ad 60.2 52 0.0018 30.7 10.1 96 182-283 67-166 (580)
66 3vc3_A Beta-cyanoalnine syntha 59.7 43 0.0015 28.9 8.8 93 45-139 49-141 (344)
67 2v7b_A Benzoate-coenzyme A lig 58.8 35 0.0012 31.3 8.6 96 184-290 36-135 (529)
68 4epl_A Jasmonic acid-amido syn 57.0 2.8 9.7E-05 39.3 0.7 31 183-213 95-126 (581)
69 4eql_A 4-substituted benzoates 55.8 3.1 0.00011 39.1 0.8 31 183-213 90-121 (581)
70 3tsy_A Fusion protein 4-coumar 55.7 53 0.0018 33.0 9.8 95 45-140 224-327 (979)
71 4dg8_A PA1221; ANL superfamily 54.4 60 0.002 30.6 9.5 91 45-140 163-262 (620)
72 3ju7_A Putative PLP-dependent 53.7 23 0.00077 31.1 6.0 64 72-139 67-137 (377)
73 3tbh_A O-acetyl serine sulfhyd 53.0 67 0.0023 27.6 8.8 92 46-140 35-127 (334)
74 1zsy_A Mitochondrial 2-enoyl t 52.1 43 0.0015 28.9 7.5 80 58-137 139-222 (357)
75 3l8c_A D-alanine--poly(phospho 51.9 94 0.0032 28.2 10.3 95 45-141 144-248 (521)
76 3gqw_A Fatty acid AMP ligase; 50.0 56 0.0019 30.2 8.5 93 45-140 175-279 (576)
77 3tqh_A Quinone oxidoreductase; 49.2 44 0.0015 28.3 7.0 75 58-137 125-202 (321)
78 4eez_A Alcohol dehydrogenase 1 46.8 37 0.0013 29.1 6.3 76 58-137 136-214 (348)
79 4gs5_A Acyl-COA synthetase (AM 45.1 34 0.0012 29.6 5.7 89 45-140 36-132 (358)
80 3nyq_A Malonyl-COA ligase; A/B 44.6 1.5E+02 0.0051 26.9 10.3 90 45-140 154-252 (505)
81 4b7c_A Probable oxidoreductase 43.7 66 0.0023 27.4 7.4 62 73-136 139-200 (336)
82 3qwb_A Probable quinone oxidor 41.0 1.4E+02 0.0048 25.2 9.1 60 75-137 140-199 (334)
83 1eg5_A Aminotransferase; PLP-d 40.4 1E+02 0.0035 26.3 8.2 58 81-139 86-147 (384)
84 3ite_A SIDN siderophore synthe 40.1 92 0.0031 28.7 8.2 84 57-140 193-281 (562)
85 3ri6_A O-acetylhomoserine sulf 38.8 1.1E+02 0.0037 27.3 8.2 56 81-138 118-174 (430)
86 3uog_A Alcohol dehydrogenase; 37.9 77 0.0026 27.4 6.9 77 57-137 160-239 (363)
87 3dzz_A Putative pyridoxal 5'-p 37.9 86 0.0029 26.9 7.3 56 81-139 106-168 (391)
88 1o69_A Aminotransferase; struc 37.9 1.1E+02 0.0038 26.5 8.1 58 79-139 67-130 (394)
89 2jtq_A Phage shock protein E; 36.9 74 0.0025 20.5 5.2 45 57-109 22-66 (85)
90 1ofu_X SULA, hypothetical prot 36.3 98 0.0033 22.0 6.0 53 72-125 47-101 (119)
91 3two_A Mannitol dehydrogenase; 36.1 97 0.0033 26.5 7.2 74 58-136 149-225 (348)
92 1oft_A SULA, hypothetical prot 36.0 1.1E+02 0.0038 23.2 6.4 38 72-110 89-126 (161)
93 2l66_A SSO7C4, transcriptional 35.4 37 0.0013 20.1 3.1 20 75-94 20-39 (53)
94 2e7j_A SEP-tRNA:Cys-tRNA synth 34.8 1.6E+02 0.0056 24.8 8.6 56 81-139 90-155 (371)
95 4ej6_A Putative zinc-binding d 34.7 93 0.0032 27.0 6.9 58 74-136 174-232 (370)
96 3s2e_A Zinc-containing alcohol 34.4 1.2E+02 0.004 25.8 7.5 76 57-137 138-216 (340)
97 1gu7_A Enoyl-[acyl-carrier-pro 33.9 87 0.003 27.0 6.6 80 58-137 138-222 (364)
98 1y80_A Predicted cobalamin bin 33.8 1.5E+02 0.0052 23.1 7.5 56 85-140 89-148 (210)
99 3ijw_A Aminoglycoside N3-acety 33.8 30 0.001 28.8 3.2 24 69-93 18-41 (268)
100 4hlb_A Uncharacterized protein 32.9 96 0.0033 20.2 4.8 37 55-91 60-96 (115)
101 1mdo_A ARNB aminotransferase; 32.4 99 0.0034 26.6 6.8 57 79-139 74-135 (393)
102 3fpc_A NADP-dependent alcohol 32.3 84 0.0029 26.9 6.2 75 58-137 139-217 (352)
103 3krt_A Crotonyl COA reductase; 32.1 1E+02 0.0035 27.7 6.9 77 58-137 198-279 (456)
104 2nyg_A YOKD protein; PFAM02522 31.9 33 0.0011 28.7 3.2 22 70-92 17-38 (273)
105 1yfb_A Transition state regula 31.9 37 0.0013 20.8 2.7 19 75-93 30-48 (59)
106 3sma_A FRBF; N-acetyl transfer 31.6 34 0.0012 28.8 3.2 30 55-92 18-47 (286)
107 3a2b_A Serine palmitoyltransfe 31.6 2E+02 0.007 24.6 8.7 55 81-139 124-181 (398)
108 1zd0_A Hypothetical protein PF 31.4 78 0.0027 23.7 4.9 58 69-130 86-144 (150)
109 4h1h_A LMO1638 protein; MCCF-l 31.2 1.8E+02 0.0062 24.8 8.0 60 80-139 8-86 (327)
110 3tla_A MCCF; serine protease, 30.7 1.8E+02 0.006 25.5 7.9 61 79-139 38-117 (371)
111 2duw_A Putative COA-binding pr 30.6 1E+02 0.0034 22.7 5.5 50 85-135 72-121 (145)
112 3isl_A Purine catabolism prote 30.5 1.6E+02 0.0053 25.5 7.8 58 81-139 83-144 (416)
113 2vsq_A Surfactin synthetase su 30.3 1.7E+02 0.006 30.4 9.1 93 45-142 606-708 (1304)
114 3acd_A Hypoxanthine-guanine ph 30.2 71 0.0024 24.7 4.7 45 57-103 12-56 (181)
115 2cf5_A Atccad5, CAD, cinnamyl 29.1 1E+02 0.0035 26.5 6.2 60 74-137 171-231 (357)
116 4hvk_A Probable cysteine desul 29.1 90 0.0031 26.5 5.9 57 82-139 86-146 (382)
117 2ch1_A 3-hydroxykynurenine tra 28.8 1.8E+02 0.006 24.9 7.8 57 81-138 90-150 (396)
118 3fbg_A Putative arginate lyase 28.7 1.7E+02 0.0059 24.8 7.6 78 58-138 116-202 (346)
119 3sr3_A Microcin immunity prote 28.7 1.9E+02 0.0065 24.8 7.7 60 80-139 9-87 (336)
120 3kgw_A Alanine-glyoxylate amin 28.6 1.4E+02 0.0049 25.4 7.2 69 68-139 84-156 (393)
121 3zrp_A Serine-pyruvate aminotr 28.5 2.2E+02 0.0076 24.0 8.4 58 81-139 74-135 (384)
122 3goh_A Alcohol dehydrogenase, 28.4 1.3E+02 0.0044 25.2 6.6 74 57-136 114-190 (315)
123 3jv7_A ADH-A; dehydrogenase, n 28.3 1.2E+02 0.004 25.9 6.4 76 59-138 143-223 (345)
124 2j8z_A Quinone oxidoreductase; 28.1 1.5E+02 0.0051 25.4 7.1 76 58-136 134-212 (354)
125 1yqd_A Sinapyl alcohol dehydro 28.0 1.5E+02 0.0051 25.6 7.1 61 73-137 177-238 (366)
126 3ohp_A Hypoxanthine phosphorib 28.0 1.5E+02 0.0052 22.6 6.3 51 57-109 7-57 (177)
127 3b8x_A WBDK, pyridoxamine 5-ph 28.0 1.8E+02 0.0061 25.0 7.7 55 80-138 76-135 (390)
128 2z61_A Probable aspartate amin 28.0 1.8E+02 0.0061 24.7 7.6 52 81-138 110-161 (370)
129 4eb5_A Probable cysteine desul 27.8 89 0.003 26.7 5.6 56 82-138 86-145 (382)
130 3kki_A CAI-1 autoinducer synth 27.7 1.1E+02 0.0037 26.7 6.2 55 81-139 140-194 (409)
131 4dup_A Quinone oxidoreductase; 27.7 1.3E+02 0.0045 25.8 6.6 77 58-137 139-218 (353)
132 1rjw_A ADH-HT, alcohol dehydro 27.6 2E+02 0.007 24.3 7.8 59 73-136 155-213 (339)
133 2j3h_A NADP-dependent oxidored 27.2 1.5E+02 0.005 25.2 6.9 56 79-136 151-206 (345)
134 2c81_A Glutamine-2-deoxy-scyll 26.9 1.2E+02 0.0041 26.5 6.4 60 75-139 74-138 (418)
135 4dq6_A Putative pyridoxal phos 26.8 1.9E+02 0.0064 24.7 7.6 53 81-138 111-171 (391)
136 2bkw_A Alanine-glyoxylate amin 26.5 2.3E+02 0.0078 24.0 8.1 57 82-139 84-145 (385)
137 2z9v_A Aspartate aminotransfer 26.5 1.5E+02 0.0052 25.3 6.9 58 81-139 80-142 (392)
138 3kax_A Aminotransferase, class 26.5 2.3E+02 0.0078 24.0 8.1 54 81-138 103-163 (383)
139 4e5s_A MCCFLIKE protein (BA_56 26.3 2.5E+02 0.0086 24.0 8.0 60 80-139 8-86 (331)
140 3ndn_A O-succinylhomoserine su 26.2 2.3E+02 0.0078 24.9 8.1 56 81-138 117-173 (414)
141 4aec_A Cysteine synthase, mito 26.1 2.1E+02 0.0073 25.5 7.7 90 47-139 139-229 (430)
142 1elu_A L-cysteine/L-cystine C- 26.1 1.4E+02 0.0048 25.4 6.6 57 81-138 98-161 (390)
143 4eye_A Probable oxidoreductase 26.1 1.1E+02 0.0039 26.0 5.9 78 57-137 130-210 (342)
144 3cq5_A Histidinol-phosphate am 25.9 2.6E+02 0.009 23.6 8.3 55 82-139 114-172 (369)
145 2pqm_A Cysteine synthase; OASS 25.8 2.4E+02 0.0081 24.1 7.8 91 45-139 41-132 (343)
146 1c7n_A Cystalysin; transferase 25.7 2.2E+02 0.0076 24.4 7.9 54 82-138 111-171 (399)
147 3jyn_A Quinone oxidoreductase; 25.5 2.6E+02 0.0091 23.3 8.1 77 58-137 112-191 (325)
148 1urh_A 3-mercaptopyruvate sulf 25.4 1.2E+02 0.004 25.0 5.7 40 69-109 72-112 (280)
149 1e0c_A Rhodanese, sulfurtransf 25.3 1.2E+02 0.004 24.9 5.6 40 69-109 67-107 (271)
150 1dqn_A Guanine phosphoribosylt 25.2 1.5E+02 0.0052 23.8 6.1 49 56-104 33-81 (230)
151 3gms_A Putative NADPH:quinone 25.1 1.7E+02 0.0058 24.8 6.9 77 57-137 115-195 (340)
152 2e18_A NH(3)-dependent NAD(+) 25.0 1.7E+02 0.0058 23.7 6.5 70 65-138 7-82 (257)
153 1yb5_A Quinone oxidoreductase; 24.9 2.4E+02 0.0083 24.0 7.8 76 58-136 142-220 (351)
154 3ip1_A Alcohol dehydrogenase, 24.6 2.7E+02 0.0092 24.3 8.2 54 80-137 210-264 (404)
155 1y81_A Conserved hypothetical 24.6 1.2E+02 0.004 22.0 4.9 50 84-134 70-119 (138)
156 2ywu_A Hypoxanthine-guanine ph 24.6 1E+02 0.0035 23.7 4.7 24 56-79 11-34 (181)
157 1b9h_A AHBA synthase, protein 24.6 1.8E+02 0.0061 24.9 7.0 59 74-137 69-132 (388)
158 3uko_A Alcohol dehydrogenase c 24.5 1.8E+02 0.0061 25.1 7.0 76 58-137 165-244 (378)
159 1t3i_A Probable cysteine desul 24.4 1.6E+02 0.0054 25.4 6.7 58 81-139 115-177 (420)
160 1z7w_A Cysteine synthase; tran 24.3 2.8E+02 0.0097 23.3 8.0 93 45-140 29-122 (322)
161 3t18_A Aminotransferase class 24.3 3.3E+02 0.011 23.4 8.8 55 81-138 122-185 (413)
162 1kol_A Formaldehyde dehydrogen 24.3 1.7E+02 0.006 25.4 6.9 56 74-134 177-233 (398)
163 2fsx_A RV0390, COG0607: rhodan 24.3 77 0.0026 23.2 3.9 40 69-109 66-105 (148)
164 3nnk_A Ureidoglycine-glyoxylat 24.3 2.3E+02 0.008 24.2 7.8 69 68-139 74-146 (411)
165 3f9t_A TDC, L-tyrosine decarbo 24.2 3.2E+02 0.011 23.0 10.0 55 81-138 120-178 (397)
166 3gaz_A Alcohol dehydrogenase s 24.1 2E+02 0.0069 24.4 7.1 73 58-134 122-197 (343)
167 1v3u_A Leukotriene B4 12- hydr 24.1 2.2E+02 0.0074 24.0 7.3 55 79-136 141-195 (333)
168 2ayi_A Aminopeptidase T; metal 24.1 1.2E+02 0.004 27.0 5.6 51 64-114 4-57 (408)
169 2d59_A Hypothetical protein PH 24.0 1.1E+02 0.0038 22.3 4.7 49 85-134 79-127 (144)
170 3euc_A Histidinol-phosphate am 23.7 1.8E+02 0.0063 24.6 6.9 55 81-138 106-164 (367)
171 2i2x_B MTAC, methyltransferase 23.7 1.7E+02 0.0059 23.9 6.3 90 226-320 122-220 (258)
172 1y80_A Predicted cobalamin bin 23.5 2.6E+02 0.009 21.7 8.1 88 229-319 90-186 (210)
173 3frk_A QDTB; aminotransferase, 23.3 95 0.0033 26.6 4.9 62 73-139 66-132 (373)
174 3qbx_A Anhydro-N-acetylmuramic 23.3 39 0.0013 29.6 2.2 35 305-339 286-320 (371)
175 1pl8_A Human sorbitol dehydrog 23.2 1.7E+02 0.0058 25.0 6.5 74 58-137 145-222 (356)
176 1vj0_A Alcohol dehydrogenase, 23.2 1.7E+02 0.0059 25.3 6.6 60 73-137 185-246 (380)
177 1e5e_A MGL, methionine gamma-l 23.1 2.3E+02 0.0079 24.6 7.5 56 81-138 98-154 (404)
178 3a2k_A TRNA(Ile)-lysidine synt 23.1 2.8E+02 0.0095 24.9 8.1 69 70-139 4-86 (464)
179 3mfq_A TROA, high-affinity zin 23.0 1.3E+02 0.0045 25.0 5.5 83 61-143 138-224 (282)
180 2huf_A Alanine glyoxylate amin 22.9 2.6E+02 0.009 23.7 7.8 57 81-138 91-151 (393)
181 2cb1_A O-acetyl homoserine sul 22.7 2E+02 0.0067 25.1 6.9 55 81-138 92-147 (412)
182 3cqy_A Anhydro-N-acetylmuramic 22.6 40 0.0014 29.5 2.1 35 305-339 292-326 (370)
183 1vjo_A Alanine--glyoxylate ami 22.5 2.7E+02 0.0093 23.7 7.8 56 82-138 107-166 (393)
184 3o7m_A Hypoxanthine phosphorib 22.4 1.8E+02 0.006 22.5 5.8 50 57-109 11-60 (186)
185 1d2f_A MALY protein; aminotran 22.3 2.4E+02 0.0081 24.1 7.4 55 81-138 108-169 (390)
186 3ss7_X D-serine dehydratase; t 22.3 4E+02 0.014 23.7 8.9 96 46-141 101-216 (442)
187 1e0c_A Rhodanese, sulfurtransf 22.3 1.2E+02 0.0041 24.7 5.1 52 58-110 192-249 (271)
188 2oga_A Transaminase; PLP-depen 22.1 2.3E+02 0.008 24.4 7.3 60 75-139 95-159 (399)
189 2vn8_A Reticulon-4-interacting 22.1 2.1E+02 0.0073 24.6 6.9 53 81-137 181-233 (375)
190 3lvm_A Cysteine desulfurase; s 22.1 2.7E+02 0.0093 24.0 7.8 55 83-138 112-170 (423)
191 3pdi_A Nitrogenase MOFE cofact 22.0 1.9E+02 0.0066 26.2 6.8 56 83-139 331-387 (483)
192 1uuf_A YAHK, zinc-type alcohol 21.9 1.7E+02 0.0057 25.3 6.2 60 73-137 185-244 (369)
193 2dr1_A PH1308 protein, 386AA l 21.9 3E+02 0.01 23.2 7.9 57 82-139 93-154 (386)
194 4a0s_A Octenoyl-COA reductase/ 21.8 1.3E+02 0.0043 26.9 5.5 77 58-137 190-271 (447)
195 3i16_A Aluminum resistance pro 21.7 1.8E+02 0.006 25.9 6.4 59 81-139 112-184 (427)
196 4dvj_A Putative zinc-dependent 21.5 1.7E+02 0.006 25.1 6.2 79 57-138 137-224 (363)
197 1j32_A Aspartate aminotransfer 21.5 3.4E+02 0.011 23.0 8.2 54 81-138 111-170 (388)
198 3pdi_B Nitrogenase MOFE cofact 21.3 1.5E+02 0.005 26.8 5.8 72 83-155 312-399 (458)
199 1e3j_A NADP(H)-dependent ketos 21.3 2E+02 0.0068 24.5 6.5 74 58-137 142-218 (352)
200 2c0c_A Zinc binding alcohol de 21.2 2.6E+02 0.009 23.9 7.3 59 74-136 154-213 (362)
201 3eod_A Protein HNR; response r 21.2 2E+02 0.0069 19.5 6.2 54 84-140 7-60 (130)
202 1p0f_A NADP-dependent alcohol 21.0 1.7E+02 0.006 25.1 6.2 55 79-137 187-242 (373)
203 3rq1_A Aminotransferase class 20.8 4E+02 0.014 22.9 8.9 55 81-138 123-186 (418)
204 3nyt_A Aminotransferase WBPE; 20.8 81 0.0028 27.0 3.9 64 71-139 63-131 (367)
205 1xho_A Chorismate mutase; sout 20.6 50 0.0017 24.4 2.0 56 59-114 44-101 (148)
206 3ecd_A Serine hydroxymethyltra 20.6 2.6E+02 0.0089 24.1 7.3 59 81-139 115-180 (425)
207 1uar_A Rhodanese; sulfurtransf 20.6 1.2E+02 0.0042 24.9 4.9 40 69-109 219-259 (285)
208 2cvh_A DNA repair and recombin 20.5 1.8E+02 0.0061 22.4 5.7 50 79-129 15-68 (220)
209 1t90_A MMSDH, probable methylm 20.5 2.3E+02 0.0077 25.7 6.9 86 227-324 141-237 (486)
210 4h27_A L-serine dehydratase/L- 20.5 1.7E+02 0.0057 25.4 5.8 87 47-140 62-148 (364)
211 2q3b_A Cysteine synthase A; py 20.3 3.8E+02 0.013 22.3 9.4 91 45-139 30-121 (313)
212 3n75_A LDC, lysine decarboxyla 20.3 2.4E+02 0.0082 27.2 7.2 47 81-130 232-292 (715)
213 1piw_A Hypothetical zinc-type 20.3 1.7E+02 0.006 25.0 5.9 60 73-137 170-229 (360)
214 3dwg_A Cysteine synthase B; su 20.2 3.4E+02 0.012 22.8 7.7 91 46-139 37-127 (325)
215 2h6e_A ADH-4, D-arabinose 1-de 20.2 2.2E+02 0.0077 24.1 6.6 52 80-136 168-221 (344)
216 3b4w_A Aldehyde dehydrogenase; 20.1 2.7E+02 0.0092 25.3 7.3 66 227-292 146-222 (495)
217 3hvy_A Cystathionine beta-lyas 20.1 2.2E+02 0.0074 25.4 6.6 59 81-139 113-184 (427)
218 1qor_A Quinone oxidoreductase; 20.0 3.8E+02 0.013 22.3 8.1 76 58-136 112-190 (327)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=2.7e-47 Score=362.83 Aligned_cols=316 Identities=28% Similarity=0.424 Sum_probs=267.2
Q ss_pred ceeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEE
Q 045351 11 TKIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLL 90 (349)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~ 90 (349)
..++.++.+..++|. ++|+.++|.+++ .++ |+++|+++.++++++||+||.++++++|+.|++ .|+++||+|+++
T Consensus 6 ~~i~~~~~~~~~~p~-~~~l~~~l~~~a--~~~-p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i~ 80 (536)
T 3ni2_A 6 EFIFRSKLPDIYIPK-NLPLHSYVLENL--SNH-SSKPCLINGANGDVYTYADVELTARRVASGLNK-IGIQQGDVIMLF 80 (536)
T ss_dssp CCCBCCSSCCCCCCS-SCCHHHHHTTTG--GGS-TTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEE
T ss_pred ceEEecCCCCCCCCC-CCcHHHHHHHHh--hcC-CCceEEEECCCCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEE
Confidence 456777778888775 589999999999 999 999999997668999999999999999999999 999999999999
Q ss_pred cCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeCCCC-----cc
Q 045351 91 SQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLDSPE-----FE 161 (349)
Q Consensus 91 ~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~-----~~ 161 (349)
++|++++++++|||+++|++++|+++..+.+++.++++.+++++++++....+.+.+ ...+++.++... +.
T Consensus 81 ~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (536)
T 3ni2_A 81 LPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFS 160 (536)
T ss_dssp CCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTCEETH
T ss_pred cCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCccCHH
Confidence 999999999999999999999999999999999999999999999999876554433 233455544321 11
Q ss_pred ccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCCCCCcEEEEecCh
Q 045351 162 PLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAARSRPAVVLCTVPY 237 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~l~~~p~ 237 (349)
++... ...........++++++|+|||||||.||||++||+++...+..... .+. +.+++++++.+|+
T Consensus 161 ~~~~~-------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~ 232 (536)
T 3ni2_A 161 ELTQA-------DENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLY-FHSEDVILCVLPM 232 (536)
T ss_dssp HHHTS-------CGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSC-CCTTCCEEECSCT
T ss_pred HHhhc-------cccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhcccccc-CCCCCEEEEecCh
Confidence 11111 11112223567899999999999999999999999999988766443 334 6789999999999
Q ss_pred hhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCH
Q 045351 238 FHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTL 316 (349)
Q Consensus 238 ~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~ 316 (349)
+|.+|+ ..++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.+ .....++++||.+++||+++++
T Consensus 233 ~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~lr~i~~gGe~l~~ 311 (536)
T 3ni2_A 233 FHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSP-DLDKHDLSSLRMIKSGGAPLGK 311 (536)
T ss_dssp TSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCS-CGGGSCCTTCCEEEEESSCCCH
T ss_pred HHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCc-ccccCCCccceEEEECCCCCCH
Confidence 999999 56788999999999999999999999999999999999999999999987 7777889999999999999999
Q ss_pred HHHHHHHHHcCCc---ccccccccCce
Q 045351 317 SVIRKYLQLNRTV---NRQLCLEFGAP 340 (349)
Q Consensus 317 ~~~~~~~~~~~~~---~~~~~~~~G~~ 340 (349)
++.+++.+.+|+. +.|+.||.|..
T Consensus 312 ~~~~~~~~~~~~~~l~~~YG~TE~~~~ 338 (536)
T 3ni2_A 312 ELEDTVRAKFPQARLGQGYGMTEAGPV 338 (536)
T ss_dssp HHHHHHHHHCTTSEEEEEEECGGGSSE
T ss_pred HHHHHHHHHCCCCCccccccccccchh
Confidence 9999999999654 34567777643
No 2
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=6.2e-47 Score=361.42 Aligned_cols=326 Identities=21% Similarity=0.277 Sum_probs=261.7
Q ss_pred ccceeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEE---eCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045351 9 SETKIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALI---DTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYD 85 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~---~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd 85 (349)
.+..++.++.+..+++. .|+.++|.+.+ +++ |+++|++ +...++++||+||.++++++|+.|++ .|+++||
T Consensus 3 ~~~~~~~~~~~~~~~~~--~tl~~~l~~~a--~~~-p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd 76 (550)
T 3rix_A 3 DAKNIKKGPAPFYPLED--GTAGEQLHKAM--KRY-ALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKR-YGLNTNH 76 (550)
T ss_dssp CGGGSEECCCCSSCCCC--SCHHHHHHHHH--HHH-HTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-HTCCTTC
T ss_pred cccceeeCCCCCCCccc--CCHHHHHHHHH--HhC-CCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 45567778888888887 99999999999 889 9999875 55557899999999999999999998 9999999
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc------CcceEEeCCCC
Q 045351 86 VAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL------KYGTVLLDSPE 159 (349)
Q Consensus 86 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~ 159 (349)
+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|++.+..+.+... ...++.++...
T Consensus 77 ~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (550)
T 3rix_A 77 RIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKT 156 (550)
T ss_dssp EEEEECSSCTTTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSS
T ss_pred EEEEEcCCcccHHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCc
Confidence 999999999999999999999999999999999999999999999999999998765544321 12233333221
Q ss_pred c-------cccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCc
Q 045351 160 F-------EPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPA 229 (349)
Q Consensus 160 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~ 229 (349)
. .++.....................++++++|+|||||||.||||++||+++...+...... .+ +.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~-~~~~~ 235 (550)
T 3rix_A 157 DYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQ-IIPDT 235 (550)
T ss_dssp CBTTBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCC-CCTTC
T ss_pred cccCcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhcccc-CCCCc
Confidence 0 1111100000000000111112345789999999999999999999999999887776554 34 67899
Q ss_pred EEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehc
Q 045351 230 VVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVAS 309 (349)
Q Consensus 230 ~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~ 309 (349)
++++.+|++|.+|+..++.+++.|+++++.+++++..+++.|+++++|++.++|+++..|.+.. .....++++||.+++
T Consensus 236 ~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~lr~i~~ 314 (550)
T 3rix_A 236 AILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKST-LIDKYDLSNLHEIAS 314 (550)
T ss_dssp EEEECSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCC-GGGGSCCTTCCEEEE
T ss_pred EEEEechHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc-cccccCcccccEEEE
Confidence 9999999999999988889999999999999999999999999999999999999999999987 667788999999999
Q ss_pred cCCCCCHHHHHHHHHHcCCc---ccccccccCceee
Q 045351 310 GGAHLTLSVIRKYLQLNRTV---NRQLCLEFGAPII 342 (349)
Q Consensus 310 gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~~~i 342 (349)
||+++++++.+++.+.++.. +.|+.||.|..+.
T Consensus 315 gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~ 350 (550)
T 3rix_A 315 GGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAIL 350 (550)
T ss_dssp CSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEE
T ss_pred ecCCCCHHHHHHHHHHcCCCccccccCcCcccccee
Confidence 99999999999999999643 5577888875443
No 3
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=1.5e-46 Score=358.68 Aligned_cols=315 Identities=20% Similarity=0.237 Sum_probs=258.4
Q ss_pred eeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCC------ceeeHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045351 12 KIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASR------HRILYPDLTLRIKTLAYSLKTKYKLSKYD 85 (349)
Q Consensus 12 ~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd 85 (349)
..+.+..|....|. +|+.++|..++ +++ |+++|+++.+.+ +++||+||.++++++|+.|.+ .|+++||
T Consensus 5 ~~~~~~~p~~~~~~--~~l~~~l~~~a--~~~-p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd 78 (549)
T 3g7s_A 5 LKYKIGFPSLYYPK--ISLADRIDAAA--EKF-GEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISR-KGVRKGE 78 (549)
T ss_dssp CSSCCCCCCCCCCC--CCTTHHHHHHH--HHH-TTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHH-TTCCTTC
T ss_pred eeeccCCCCCCcCC--CCHHHHHHHHH--HhC-CCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHH-cCCCCCC
Confidence 34556666666666 99999999999 999 999999987321 899999999999999999998 9999999
Q ss_pred EEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcc-eEEeCCC--
Q 045351 86 VAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYG-TVLLDSP-- 158 (349)
Q Consensus 86 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~-~~~~~~~-- 158 (349)
+|+|+++|+++++++++||+++|++++|+++..+.+++.++++.+++++++++....+.+.. .... ++..+..
T Consensus 79 ~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (549)
T 3g7s_A 79 HVGVCIPNSIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVN 158 (549)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETCSSS
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999876554432 2222 2233211
Q ss_pred CccccccccCCCCCCCCccccccccC-CCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecCh
Q 045351 159 EFEPLSATDSLDYYDDDEERVRVSVS-LSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPY 237 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~ 237 (349)
.+.+...... ......... ++++++|+|||||||.||||++||+++...+......++ +.+++++++.+|+
T Consensus 159 ~~~~~~~~~~-------~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~~~~~p~ 230 (549)
T 3g7s_A 159 SLSEVMDSGS-------EDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATG-LSHMDTIVGCMPM 230 (549)
T ss_dssp CHHHHHHHSC-------SCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHC-CCTTCEEECCSCT
T ss_pred CHHHHHhcCc-------cccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcC-CCCCCEEEEeCcH
Confidence 1222221111 111112233 389999999999999999999999999999988888887 7899999999999
Q ss_pred hhHhhHHHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCC--CCCCcchheehccCCCCC
Q 045351 238 FHSYGFTCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMD--GYDLSSIEVVASGGAHLT 315 (349)
Q Consensus 238 ~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~--~~~l~~lr~i~~gG~~l~ 315 (349)
+|.+++..++.++..|+++++.+.+++..+++.|+++++|++.++|.++..|.+.. ... ..+++++|.+++||++++
T Consensus 231 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~~~~gg~~l~ 309 (549)
T 3g7s_A 231 FHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTL-ESSNKTYDWSYLKVFATGAWPVA 309 (549)
T ss_dssp TSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-HHSCCCCCCTTCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhh-hhhcccCCccceeEEEeCCccCC
Confidence 99999977889999999999999999999999999999999999999999998864 332 367899999999999999
Q ss_pred HHHHHHHHHH----cCC-----cccccccccCcee
Q 045351 316 LSVIRKYLQL----NRT-----VNRQLCLEFGAPI 341 (349)
Q Consensus 316 ~~~~~~~~~~----~~~-----~~~~~~~~~G~~~ 341 (349)
+++.+++.+. ++. .+.|+.||.|..+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 344 (549)
T 3g7s_A 310 PALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMV 344 (549)
T ss_dssp HHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEE
T ss_pred HHHHHHHHHHHHhhcCCccccccceEeccccchhh
Confidence 9999999998 542 2345667766433
No 4
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.3e-45 Score=372.11 Aligned_cols=325 Identities=28% Similarity=0.388 Sum_probs=267.0
Q ss_pred CCCccccceeeccCCCCCCCCCCCcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCC
Q 045351 4 KNGFCSETKIFHSLRPSIAFPPETTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSK 83 (349)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~ 83 (349)
.+........+.+..+...+|. .+|+.++|.+++ .++ |+++|+++..+++++||+||.++++++|+.|++ .|+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~p~-~~tl~~~l~~~a--~~~-pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~ 112 (979)
T 3tsy_A 38 QSNNNNSDVIFRSKLPDIYIPN-HLSLHDYIFQNI--SEF-ATKPCLINGPTGHVYTYSDVHVISRQIAANFHK-LGVNQ 112 (979)
T ss_dssp -------CCCBCCSSCCCCCCT-TSCHHHHHTTTG--GGT-TTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-TTCCT
T ss_pred cccCCCCCceeecCCCCCCCCC-CCCHHHHHHHHH--HhC-CCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHH-cCCCC
Confidence 3444455667778888777775 489999999999 999 999999997668999999999999999999999 99999
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeCCCC
Q 045351 84 YDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLDSPE 159 (349)
Q Consensus 84 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~ 159 (349)
||+|+|+++|++++++++|||+++|++++|++|..+.+++.++++.++++++|++....+.+.. ....++.++...
T Consensus 113 gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (979)
T 3tsy_A 113 NDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNE 192 (979)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCT
T ss_pred cCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcc
Confidence 9999999999999999999999999999999999999999999999999999999877665543 233344444321
Q ss_pred ----------ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCC
Q 045351 160 ----------FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAAR 225 (349)
Q Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~ 225 (349)
+.++...... ...........++++++|+|||||||.||||+++|+++...+..... .+. +
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-~ 267 (979)
T 3tsy_A 193 SVPIPEGCLRFTELTQSTTE----ASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY-F 267 (979)
T ss_dssp TSCCCTTEEEGGGTSSCCSG----GGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSC-C
T ss_pred cccCCcccccHHHHhhcccc----ccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhccccc-C
Confidence 1111111000 00111223567899999999999999999999999999988766543 334 6
Q ss_pred CCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcch
Q 045351 226 SRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSI 304 (349)
Q Consensus 226 ~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~l 304 (349)
.+++++++.+|++|.+++ ..++.++..|+++++.+++++..+++.|+++++|++.++|+++..|.+.. .....++++|
T Consensus 268 ~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~l 346 (979)
T 3tsy_A 268 HSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSS-ETEKYDLSSI 346 (979)
T ss_dssp CSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCG-GGGTSCCTTC
T ss_pred CCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCc-cccCCCccce
Confidence 789999999999999999 56788999999999999999999999999999999999999999999987 6777789999
Q ss_pred heehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 305 EVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 305 r~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
|.+++||+++++++.+++.+.||+. +.|+.||.|.
T Consensus 347 r~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~ 384 (979)
T 3tsy_A 347 RVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGP 384 (979)
T ss_dssp CEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCS
T ss_pred EEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhH
Confidence 9999999999999999999999654 3356677654
No 5
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=6.5e-45 Score=347.12 Aligned_cols=316 Identities=22% Similarity=0.273 Sum_probs=256.8
Q ss_pred ceeeccCCCCCCCCCCCcchhh-hhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEE
Q 045351 11 TKIFHSLRPSIAFPPETTSVTS-YVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFL 89 (349)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~tl~~-~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i 89 (349)
.+.+.+..+....|. ..|+.+ ++..++ .++ +++|+++...++++||+||.++++++|+.|++ .|+++||+|++
T Consensus 9 ~~~~~~~~~~~~~p~-~~~l~~~~l~~~~--~~~--~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i 82 (548)
T 2d1s_A 9 NIVVGPKPFYPIEEG-SAGTQLRKYMERY--AKL--GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQN-YGLVVDGRIAL 82 (548)
T ss_dssp TSEECCCCSSCCCSS-CHHHHHHHHHHHH--HHH--TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHH-HTCCTTCEEEE
T ss_pred ceEecCCCCCCCCCC-cCcHHHHHHHhhh--ccc--CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEE
Confidence 356677766666654 468999 888888 655 89999985457899999999999999999998 99999999999
Q ss_pred EcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc------CcceEEeCCCC----
Q 045351 90 LSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL------KYGTVLLDSPE---- 159 (349)
Q Consensus 90 ~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~---- 159 (349)
+++|+++++++++||+++|++++|+++..+.+++.++++.++++++|++....+.+... ...++.++...
T Consensus 83 ~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (548)
T 2d1s_A 83 CSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRG 162 (548)
T ss_dssp ECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTT
T ss_pred EeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCcccccc
Confidence 99999999999999999999999999999999999999999999999998765443321 12344444321
Q ss_pred ---ccccccccCCCCCCCCcccccccc------CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCC
Q 045351 160 ---FEPLSATDSLDYYDDDEERVRVSV------SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSR 227 (349)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~ 227 (349)
+.++..... ......... .++++++|+|||||||.||||++||+++...+...... ++ +.+
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~-~~~ 235 (548)
T 2d1s_A 163 YQCLDTFIKRNT------PPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQ-VSP 235 (548)
T ss_dssp BCBHHHHHHHTS------CTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCC-CCT
T ss_pred cccHHHHHhcCc------cccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccC-CCc
Confidence 111111100 000001111 23899999999999999999999999999988776655 45 678
Q ss_pred CcEEEEecChhhHhhHHH-HHhhhhcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchhe
Q 045351 228 PAVVLCTVPYFHSYGFTC-CLRSLGMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEV 306 (349)
Q Consensus 228 ~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~ 306 (349)
++++++..|++|.+|+.. ++.++ .|+++++.+++++..+++.|+++++|+++++|++++.|.+.. .....++++||.
T Consensus 236 ~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~lr~ 313 (548)
T 2d1s_A 236 GTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSE-LLNKYDLSNLVE 313 (548)
T ss_dssp TCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCS-CGGGSCCTTCCE
T ss_pred cceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCc-ccccccccceeE
Confidence 999999999999999955 55666 999999999999999999999999999999999999999886 666678899999
Q ss_pred ehccCCCCCHHHHHHHHHHcCC---cccccccccCcee
Q 045351 307 VASGGAHLTLSVIRKYLQLNRT---VNRQLCLEFGAPI 341 (349)
Q Consensus 307 i~~gG~~l~~~~~~~~~~~~~~---~~~~~~~~~G~~~ 341 (349)
+++||+++++++.+++.+.||+ .+.|+.||.|...
T Consensus 314 i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~ 351 (548)
T 2d1s_A 314 IASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAI 351 (548)
T ss_dssp EEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEE
T ss_pred EEEcCccCCHHHHHHHHHHcCCCceeecccccccccee
Confidence 9999999999999999999864 3446778876543
No 6
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=5e-46 Score=352.53 Aligned_cols=300 Identities=21% Similarity=0.227 Sum_probs=247.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|..++ +.+ |+++|+++.+.++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 16 ~~l~~~l~~~a--~~~-p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 91 (517)
T 3r44_A 16 KNIGWMLRQRA--TVS-PRLQAYVEPSTDVRMTYAQMNALANRCADVLTA-LGIAKGDRVALLMPNSVEFCCLFYGAAKL 91 (517)
T ss_dssp GCHHHHHHHHH--HHS-TTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHH--HhC-CCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHH-cCCCCcCEEEEEcCCCHHHHHHHHHHHHh
Confidence 79999999999 999 999999997444599999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC------cceEEe-CCCCccccccccCCCCCCCCccccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK------YGTVLL-DSPEFEPLSATDSLDYYDDDEERVR 180 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
|++++|+++..+.+++.++++.+++++++++....+.+.... ..++.. ....+.+.... .......
T Consensus 92 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 164 (517)
T 3r44_A 92 GAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRS-------AAADEPA 164 (517)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEEEHHHHHHHHHH-------CCCCCCC
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEccCcccHHHHhhc-------cCcCCCC
Confidence 999999999999999999999999999999876554433210 011111 10011111111 1111122
Q ss_pred cccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 181 VSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 181 ~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
....++++++|+|||||||.||||++||+++...+......++ +..++++++.+|++|.+|+...+.+++.|+++++.+
T Consensus 165 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~~~~G~~~v~~~ 243 (517)
T 3r44_A 165 VECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTID-VRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMP 243 (517)
T ss_dssp CCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSC-CCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS
T ss_pred CCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcC-CCCCCEEEEeCchHHHHHHHHHHHHHhcCeEEEEeC
Confidence 3567899999999999999999999999999999988888887 789999999999999999976666666999999999
Q ss_pred CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCc
Q 045351 261 KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGA 339 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~ 339 (349)
.+++..+++.++++++|++.++|+++..|.+.+ .....++++||.+++||+++++++.+.+.+.. +..+.|+.||.+.
T Consensus 244 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~YG~TE~~~ 322 (517)
T 3r44_A 244 QFDATKVWSLIVEERVCIGGAVPAILNFMRQVP-EFAELDAPDFRYFITGGAPMPEALIKIYAAKNIEVVQGYALTESCG 322 (517)
T ss_dssp SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSH-HHHHCCCTTCCEEEECSSCCCHHHHHHHHHTTCEEEEEEECGGGTT
T ss_pred CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc-ccccCCCCcccEEEECCCCCCHHHHHHHHhcCCcEEEeeccccccc
Confidence 999999999999999999999999999999876 55667789999999999999999999998862 2334466777654
Q ss_pred e
Q 045351 340 P 340 (349)
Q Consensus 340 ~ 340 (349)
.
T Consensus 323 ~ 323 (517)
T 3r44_A 323 G 323 (517)
T ss_dssp C
T ss_pred c
Confidence 3
No 7
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=2.2e-45 Score=347.91 Aligned_cols=296 Identities=16% Similarity=0.136 Sum_probs=247.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
||+.+.|..++ +++ |+++|+++. ++++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 1 m~l~~~l~~~a--~~~-p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~e~~~~~la~~~~ 74 (512)
T 3fce_A 1 MKLLEQIEKWA--AET-PDQTAFVWR--DAKITYKQLKEDSDALAHWISS-EYPDDRSPIMVYGHMQPEMIINFLGCVKA 74 (512)
T ss_dssp CCHHHHHHHHH--HHS-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-HSTTCCCCEEEEESSCHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHH--HHC-CCceEEEeC--CceEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 58999999999 999 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.+++++++++...... .....+. ....+........ ...........+++
T Consensus 75 G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~d 145 (512)
T 3fce_A 75 GHAYIPVDLSIPADRVQRIAENSGAKLLLSATAVTVT--DLPVRIV--SEDNLKDIFFTHK-----GNTPNPEHAVKGDE 145 (512)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSS--CCSSEEE--ETHHHHHHHHHTT-----TCCCCGGGSCCTTS
T ss_pred CCEEEeeCCCCcHHHHHHHHHhcCCCEEEecCccccc--cccccee--chhhhhhhccccc-----ccCCCccccCCCCC
Confidence 9999999999999999999999999999997543211 1111111 1111111111100 11112233567899
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---CCH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK---FDF 264 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~ 264 (349)
+++|+|||||||.||||++||+++.+.+......++ +.+++++++..|++|.+++..++.+++.|+++++.+. +++
T Consensus 146 ~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 224 (512)
T 3fce_A 146 NFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFN-LQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKDMIARP 224 (512)
T ss_dssp EEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTT-CCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHHHHHSH
T ss_pred eEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcC-CCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHHHhhCH
Confidence 999999999999999999999999999988888887 7899999999999999999889999999999999976 699
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCce
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGAP 340 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~~ 340 (349)
..+++.++++++|++.++|+++..++... .....+++++|.+++||+++++++.+++.+.|++. +.|++||.|..
T Consensus 225 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~ 302 (512)
T 3fce_A 225 KDLFASLEQSDIQVWTSTPSFAEMCLMEA-SFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVA 302 (512)
T ss_dssp HHHHHHHHHHCCCEEEECHHHHHHHTTST-TCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSC
T ss_pred HHHHHHHHHcCCcEEEecHHHHHHHHhhc-cccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhh
Confidence 99999999999999999999999999887 66777899999999999999999999999999654 34566776543
No 8
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=9.6e-45 Score=345.39 Aligned_cols=294 Identities=20% Similarity=0.203 Sum_probs=247.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|..++ +++ |+++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++
T Consensus 25 ~tl~~~l~~~a--~~~-p~~~A~~~~--~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 98 (539)
T 1mdb_A 25 ETFGDLLRDRA--AKY-GDRIAITCG--NTHWSYRELDTRADRLAAGFQK-LGIQQKDRVVVQLPNIKEFFEVIFALFRL 98 (539)
T ss_dssp CCHHHHHHHHH--HHH-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-HTCCTTCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH--HHC-CCCEEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHHc
Confidence 79999999999 889 999999997 7899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccc--------cccc-c-Ccc-eEEeCC-CCccccccccCCCCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAH--------KIPQ-L-KYG-TVLLDS-PEFEPLSATDSLDYYDDD 175 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~--------~~~~-~-~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 175 (349)
|++++|+++..+.+++.++++.++++++++++.... .+.. . ... ++..+. ..+.++.... .
T Consensus 99 Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 171 (539)
T 1mdb_A 99 GALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLH-------T 171 (539)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTTSEEGGGCC-------C
T ss_pred CeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCccchhhhhhcc-------c
Confidence 999999999999999999999999999999875321 1110 0 112 222222 1222222110 1
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH--HHHhhhhcC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT--CCLRSLGMG 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~--~~~~~l~~G 253 (349)
.........++++++|+|||||||.||||++||+++.+.+......++ +.+++++++.+|++|.+++. .++.+|+.|
T Consensus 172 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G 250 (539)
T 1mdb_A 172 EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCW-LDHSTVYLAALPMAHNYPLSSPGVLGVLYAG 250 (539)
T ss_dssp CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHT-CCTTCEEEECSCTTSHHHHHSSHHHHHHHTT
T ss_pred cccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhC-CCCCCEEEEeecccccchhhHHHHHHHHHhC
Confidence 011123456789999999999999999999999999999888777777 78999999999999999994 689999999
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--ccc
Q 045351 254 ESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNR 331 (349)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~ 331 (349)
+++++.+.+++..+++.|+++++|++.++|+++..|++.. .....++++||.+++||+++++++.+++.+.++. .+.
T Consensus 251 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~ 329 (539)
T 1mdb_A 251 GRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAA-SSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQV 329 (539)
T ss_dssp CEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHH-HHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEE
T ss_pred CEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCc-cccCCCccceeEEEEcCCCCCHHHHHHHHHHhCCcEEEE
Confidence 9999999999999999999999999999999999998875 5556678999999999999999999999998853 244
Q ss_pred ccccc
Q 045351 332 QLCLE 336 (349)
Q Consensus 332 ~~~~~ 336 (349)
|+.+|
T Consensus 330 YG~TE 334 (539)
T 1mdb_A 330 FGMAE 334 (539)
T ss_dssp EECTT
T ss_pred EcCCC
Confidence 55566
No 9
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=8e-45 Score=343.40 Aligned_cols=298 Identities=23% Similarity=0.250 Sum_probs=242.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.++|..++ +++ |+++|+++...++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++
T Consensus 2 ~tl~~~l~~~a--~~~-p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 77 (504)
T 1t5h_X 2 QTVNEMLRRAA--TRA-PDHCALAVPARGLRLTHAELRARVEAVAARLHA-DGLRPQQRVAVVAPNSADVVIAILALHRL 77 (504)
T ss_dssp CCHHHHHHHHH--HHC-TTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHH--HhC-CCceEEEEcCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHh
Confidence 57999999999 889 999999987557899999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEE--cCcccccc-ccc-CcceEEeCCCCccccccccCCCCCCCCcccccccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFA--THDTAHKI-PQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSV 183 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~--~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
|++++|+++..+.+++.++++.++++++++ +....+.+ ... ..+++. +.++...... .. ..........
T Consensus 78 G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~-~~~~~~~~~~ 150 (504)
T 1t5h_X 78 GAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIF-----LGDLVRDGEP-YS-YGPPIEDPQR 150 (504)
T ss_dssp TCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCCCCEEEE-----GGGTEETTEE-CC-CSCCCCCCCC
T ss_pred CcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccccceeEE-----ecchhhcCcc-cc-cCCccCCCCC
Confidence 999999999999999999999999999999 66544333 211 112221 2222211100 00 0000111345
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCC--CCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAAR--SRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~ 260 (349)
.++++++|+|||||||.||||++||+++.+.+......++ + .+++++++.+|++|.+|+ ..++.+++.|+++++.+
T Consensus 151 ~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 229 (504)
T 1t5h_X 151 EPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVG-LRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVE 229 (504)
T ss_dssp CTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTC-CCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECS
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhC-CCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCC
Confidence 6789999999999999999999999999998887766666 5 788999999999999998 67889999999999999
Q ss_pred CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCC-CCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--ccccccccc
Q 045351 261 KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG-TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEF 337 (349)
Q Consensus 261 ~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~-~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~ 337 (349)
.+++..+++.|+++++|+++++|++++.|.+... .....++++||.+++||+++++++.+++.+.++. .+.|+.||.
T Consensus 230 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~ 309 (504)
T 1t5h_X 230 EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEA 309 (504)
T ss_dssp SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTT
T ss_pred CCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcCcceeeeeccccc
Confidence 9999999999999999999999999999987640 1345678999999999999999999999999863 344556665
No 10
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=8.1e-45 Score=346.30 Aligned_cols=297 Identities=18% Similarity=0.176 Sum_probs=248.4
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.++|..++ +++ |+++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++
T Consensus 30 ~tl~~~l~~~a--~~~-p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 103 (544)
T 3o83_A 30 QPLTRILTVGV--QSH-PHSLAIICG--ERQLSYIELDRLSTNLATRLAE-KGLGKGDTALVQLPNVAEFYIVFFALLKA 103 (544)
T ss_dssp CCTTHHHHHHH--HHC-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH--HhC-CCceEEEcC--CCceeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 78999999999 999 999999997 8999999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc--------ccc--cCcc-eEEeCCCC----ccccccccCCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK--------IPQ--LKYG-TVLLDSPE----FEPLSATDSLDYY 172 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------~~~--~~~~-~~~~~~~~----~~~~~~~~~~~~~ 172 (349)
|++++|+++..+.+++.++++.+++++++++...... +.. .... ++..+... +.++....
T Consensus 104 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 178 (544)
T 3o83_A 104 GVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGLLDWIETP----- 178 (544)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTTSEEHHHHHHSC-----
T ss_pred CcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCccccchhhhhhcc-----
Confidence 9999999999999999999999999999998764311 111 1111 22222211 11111110
Q ss_pred CCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH--HHHhhh
Q 045351 173 DDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT--CCLRSL 250 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~--~~~~~l 250 (349)
...........++++++|+|||||||.||||++||+++...+......++ +.+++++++.+|++|.+++. .++.++
T Consensus 179 -~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~~~~~~~~~~~l 256 (544)
T 3o83_A 179 -AETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICG-LNSNTRLLCALPAPHNFMLSSPGALGVL 256 (544)
T ss_dssp -CSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTT-CCTTCEEEECSCTTSHHHHHSSHHHHHH
T ss_pred -cccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhC-CCCCCeEEEecCcceEeecchHHHHHHH
Confidence 01111113456789999999999999999999999999999998888887 79999999999999999984 688999
Q ss_pred hcCCEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--
Q 045351 251 GMGESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT-- 328 (349)
Q Consensus 251 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~-- 328 (349)
..|+++++.+.+++..+++.|+++++|++.++|+++..|++.. .....++++||.+++||+++++++.+++.+.++.
T Consensus 257 ~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~ 335 (544)
T 3o83_A 257 HAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKA-AQYKDQIQSLKLLQVGGASFPESLARQVPEVLNCKL 335 (544)
T ss_dssp HTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHH-TTTHHHHTTCCEEEEESSCCCHHHHTHHHHHHCSEE
T ss_pred HcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhch-hhccccCCcceEEEEcCCCCCHHHHHHHHHHhCCcE
Confidence 9999999999999999999999999999999999999999886 6666778999999999999999999999998853
Q ss_pred cccccccccC
Q 045351 329 VNRQLCLEFG 338 (349)
Q Consensus 329 ~~~~~~~~~G 338 (349)
.+.|+++|.+
T Consensus 336 ~~~YG~TE~~ 345 (544)
T 3o83_A 336 QQVFGMAEGL 345 (544)
T ss_dssp EEEEECTTSC
T ss_pred Eeeecccccc
Confidence 3445666654
No 11
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=2.1e-45 Score=345.49 Aligned_cols=295 Identities=15% Similarity=0.155 Sum_probs=237.2
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-----CC--ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-----SR--HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL 100 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-----~~--~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~ 100 (349)
+|+.++|..++ +++ ||++|+++.+ ++ +++||+||.++++++|+.|++ .|+ +||+|+|+++|+++++++
T Consensus 24 ~tl~~~l~~~a--~~~-pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~g~-~gd~V~i~~~n~~e~~~~ 98 (480)
T 3t5a_A 24 RSLPAALRACA--RLQ-PHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSR-CGS-TGDRVVISAPQGLEYVVA 98 (480)
T ss_dssp CCHHHHHHHHH--HHS-TTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTT-SSC-TTCEEEEECCSSHHHHHH
T ss_pred ccHHHHHHHHH--HhC-CCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHh-cCC-CCCEEEEEcCCcHHHHHH
Confidence 89999999999 999 9999999752 22 799999999999999999998 896 999999999999999999
Q ss_pred HHHHHhcCCeEecCCC---CCCHHHHHHHHhhcCCeEEEEcCcccccccccCc--------ceEEeCCCCccccccccCC
Q 045351 101 YLSLFSLGVVVSPCNP---SCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKY--------GTVLLDSPEFEPLSATDSL 169 (349)
Q Consensus 101 ~lA~~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 169 (349)
+|||+++|++++|+++ ..+.+++.++++.++++++|++....+.+..... .++..+.. ...
T Consensus 99 ~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--- 170 (480)
T 3t5a_A 99 FLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLL-----DLD--- 170 (480)
T ss_dssp HHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGS-----CTT---
T ss_pred HHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccc-----ccc---
Confidence 9999999999999999 7789999999999999999999876554433111 12222110 000
Q ss_pred CCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCC------CcEEEEecChhhHhhH
Q 045351 170 DYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSR------PAVVLCTVPYFHSYGF 243 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~------~~~~l~~~p~~~~~g~ 243 (349)
...........++++++|+|||||||.||||++||+++...+......+. +.. ++++++.+|++|.+|+
T Consensus 171 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~g~ 245 (480)
T 3t5a_A 171 ----APNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYF-ADTDGIPPPNSALVSWLPFYHDMGL 245 (480)
T ss_dssp ----CC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHC-TTTTTCCCTTEEEEECCCTTSTTHH
T ss_pred ----cccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhc-cccccCCCCCCeEEEeCCCcCccHH
Confidence 11112233567789999999999999999999999999998888777666 455 8999999999999998
Q ss_pred -HHHHhhhhcCCEEEEcCCC----CHHHHHHHHHhhcccEEEechHHHHHHHhc----CCCCCCCCCcchheehccCCCC
Q 045351 244 -TCCLRSLGMGESLVCMGKF----DFGRMLKAVEEFRVSHVVLAPPVVLKMARD----GGTMDGYDLSSIEVVASGGAHL 314 (349)
Q Consensus 244 -~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~----~~~~~~~~l~~lr~i~~gG~~l 314 (349)
..++.+|+.|+++++.+++ ++..+++.++++++| +..+|.++..++.. . .....++++||.+++||+++
T Consensus 246 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~-~~~~~~l~~lr~i~~gG~~l 323 (480)
T 3t5a_A 246 VIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDD-DMAGRDLGNILTILSGSERV 323 (480)
T ss_dssp HHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTG-GGTTCCCTTCCEEEECCTTC
T ss_pred HHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcc-cccccchhhhheeeecCCcC
Confidence 6788999999999999754 999999999999999 88899988888764 2 34567789999999999999
Q ss_pred CHHHHHHHHHHcC--------CcccccccccCceee
Q 045351 315 TLSVIRKYLQLNR--------TVNRQLCLEFGAPII 342 (349)
Q Consensus 315 ~~~~~~~~~~~~~--------~~~~~~~~~~G~~~i 342 (349)
++++++++.+.++ ..+.|+.||.+..+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~ 359 (480)
T 3t5a_A 324 QAATIKRFADRFARFNLQERVIRPSYWLAEATVYVA 359 (480)
T ss_dssp CHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEE
T ss_pred CHHHHHHHHHHHhhcCCChhhccccccccccceeEe
Confidence 9999999999984 233456677665443
No 12
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=7.4e-44 Score=343.64 Aligned_cols=285 Identities=16% Similarity=0.057 Sum_probs=240.5
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
..|+.+.|.+++ .++ ||++|+++. ++++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||++
T Consensus 26 ~~tl~~~~~~~a--~~~-Pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~g~~V~i~~~~s~~~vva~lailk 99 (620)
T 4dg8_A 26 HPTVVARFSEMA--ALH-PHREAIRDR--FGSVDYRQLLDSAEQLSDYLLE-HYPQPGVCLGVYGEYSRESITCLLAILL 99 (620)
T ss_dssp SCCHHHHHHHHH--HHC-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-HCCSSCCEEEEESSSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH--HhC-CCCeEEEcC--CCcCcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 379999999999 999 999999997 7899999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
+|++++|+++..+.+++.++++.+++++++++......... ....... .... ...........++
T Consensus 100 aGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~-----~~~~--------~~~~~~~~~~~~~ 164 (620)
T 4dg8_A 100 SGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANG--LPCVPVR-----HLPA--------APASVARPCFAAD 164 (620)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCTT--SCEEEGG-----GCCC--------CCCCSSCCCCCTT
T ss_pred hCCEEEeeCccChHHHHHHHHHhCCCcEEEecCcccccccC--Cceeeec-----cCCc--------CCccccCCCCCCC
Confidence 99999999999999999999999999999976544332221 1111110 0000 1111122245689
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC--CCCH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG--KFDF 264 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~--~~~~ 264 (349)
++++|+|||||||.||||+++|+++.+.+.. ...+. +.++++++...|++|+.++..++.+|+.|+++++.+ .+++
T Consensus 165 d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 242 (620)
T 4dg8_A 165 QIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLA-FAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLDP 242 (620)
T ss_dssp SEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGT-TCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCSSSCCH
T ss_pred CeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhC-CCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCccccCCH
Confidence 9999999999999999999999999887766 44455 789999999999999999988999999999999974 6899
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
..+++.|+++++|++.++|++++.|.+.. ..++++||.+++||++++++..+++.+.+++. +.|+.||.+
T Consensus 243 ~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~----~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 315 (620)
T 4dg8_A 243 GVLRQLIGERGADSAWLTASLFNTLVDLD----PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENT 315 (620)
T ss_dssp HHHHHHHHTTCCCEEEEEHHHHHHHHHHC----GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGC
T ss_pred HHHHHHHHHhCCcEEEccHHHHHHHHhcC----hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhh
Confidence 99999999999999999999999998764 34578999999999999999999999888654 345556654
No 13
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=9.1e-44 Score=340.85 Aligned_cols=287 Identities=15% Similarity=0.146 Sum_probs=242.3
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
..++.++|..++ +++ |+++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||++
T Consensus 74 ~~~l~~~l~~~a--~~~-pd~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~ 147 (570)
T 4gr5_A 74 GACVHELFEAQA--ARA-PDAVALLHE--ADELTYGALNERANRLAHRLVG-LGVAPGTLVGVHLERGFDMVVALLAVLK 147 (570)
T ss_dssp SCCHHHHHHHHH--HHC-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH--HHC-CCCeEEECC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999 999 999999997 8999999999999999999999 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
+|++++|+++..+.+++.++++.+++++++++......+... ..+....... .. ...........++
T Consensus 148 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~----~~-------~~~~~~~~~~~~~ 214 (570)
T 4gr5_A 148 AGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLTGT--TTLYVEDEAA----SD-------APAGNLATGVGPE 214 (570)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSCSS--EEEECCC------------------CCCCCCCCCTT
T ss_pred HCCEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhcccCC--cceeeecccc----cc-------ccccccCCCCCCC
Confidence 999999999999999999999999999999998765544331 1111111000 00 1111222346789
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC--CCCH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG--KFDF 264 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~--~~~~ 264 (349)
++++|+|||||||.||||++||+++.+.+.. ...++ +.+++++++..|++|..+...++.+++.|+++++.+ .+++
T Consensus 215 d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 292 (570)
T 4gr5_A 215 DVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAG-FGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSGQNPDP 292 (570)
T ss_dssp SEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSC-CSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSSSSCCH
T ss_pred CeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcC-CCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCCccCCH
Confidence 9999999999999999999999999887765 34444 688999999999999888888899999999999986 5799
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
..+++.|+++++|++.++|+++..|.+.. . .++++||.+++||+++++++.+++.+.+++. +.|+.||.+
T Consensus 293 ~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~ 365 (570)
T 4gr5_A 293 LEIGELVARHGVTMLQLSASLFNFLVDEV-P---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESM 365 (570)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHHHHHHHC-G---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGC
T ss_pred HHHHHHHHHcCCcEEEecHHHHHHHHhhc-h---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhhe
Confidence 99999999999999999999999999874 2 3578999999999999999999999998654 335566654
No 14
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=4.6e-44 Score=340.83 Aligned_cols=300 Identities=19% Similarity=0.217 Sum_probs=244.3
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeC--CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDT--ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~--~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
.|+.++|..++ +.+ |+++|+++. ..++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+
T Consensus 18 ~~l~~~l~~~a--~~~-p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 93 (541)
T 1v25_A 18 LNLWDFLERAA--ALF-GRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRA-LGVGVGDRVATLGFNHFRHLEAYFAVP 93 (541)
T ss_dssp CCTHHHHHHHH--HHS-TTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHH--HhC-CCceEEEEecCCCCceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 68999999999 889 999999952 236899999999999999999998 999999999999999999999999999
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-----Cc-ceEEeCCCC---ccccccccCCCCCCCCc
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-----KY-GTVLLDSPE---FEPLSATDSLDYYDDDE 176 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~ 176 (349)
++|++++|+++..+.+++.++++.++++++|++.+..+.+... .. .++.++... ...+...... ...
T Consensus 94 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 169 (541)
T 1v25_A 94 GMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGE----EAD 169 (541)
T ss_dssp HTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHCCS----CCC
T ss_pred hcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHHhhc----cCC
Confidence 9999999999999999999999999999999988765433221 11 233333221 0000000000 010
Q ss_pred cccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh--hhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCC
Q 045351 177 ERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG--GHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGE 254 (349)
Q Consensus 177 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~--~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~ 254 (349)
.....++++++|+|||||||.||||++||+++...... ....++ +.+++++++.+|++|.+++..++.+++.|+
T Consensus 170 ---~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~ 245 (541)
T 1v25_A 170 ---PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTA-LSEKDVVLPVVPMFHVNAWCLPYAATLVGA 245 (541)
T ss_dssp ---CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTC-CCTTCEEEECSCTTSHHHHTHHHHHHHHTC
T ss_pred ---cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhccccc-CCCCCEEEEeccchhhhHHHHHHHHHhcCc
Confidence 12456789999999999999999999999999877655 234455 688999999999999999977889999999
Q ss_pred EEEEcC-CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--Cccc
Q 045351 255 SLVCMG-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNR 331 (349)
Q Consensus 255 ~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~ 331 (349)
++++.+ .+++..+++.++++++|++.++|+++..|.+.. .....++++||.+++||+++++++.+++ +.++ ..+.
T Consensus 246 ~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~g~~~~~~ 323 (541)
T 1v25_A 246 KQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYL-ESTGHRLKTLRRLVVGGSAAPRSLIARF-ERMGVEVRQG 323 (541)
T ss_dssp EEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-HHHTCCCSSCCEEEECSSCCCHHHHHHH-HHTTCEEEEE
T ss_pred eEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhh-hccCCcchhccEEEECCCCCCHHHHHHH-HHhCCceeec
Confidence 999986 479999999999999999999999999998865 4445678999999999999999999999 6663 2344
Q ss_pred ccccccCcee
Q 045351 332 QLCLEFGAPI 341 (349)
Q Consensus 332 ~~~~~~G~~~ 341 (349)
|+.||.|..+
T Consensus 324 YG~TE~~~~~ 333 (541)
T 1v25_A 324 YGLTETSPVV 333 (541)
T ss_dssp EECGGGSSEE
T ss_pred ccccccccce
Confidence 6677776433
No 15
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=3.8e-44 Score=339.30 Aligned_cols=295 Identities=17% Similarity=0.125 Sum_probs=249.7
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.+.|..++ +++ |+++|+++. ++++||+||+++++++|+.|.++.|.++|++|+++++|++++++++|||+++
T Consensus 1 m~l~~~l~~~a--~~~-p~~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~ 75 (511)
T 3e7w_A 1 MKLLHAIQTHA--ETY-PQTDAFRSQ--GQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKA 75 (511)
T ss_dssp CCHHHHHHHHH--HHS-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHH--HHC-CCCeEEEcC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHh
Confidence 58999999999 999 999999997 8999999999999999999987458899999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.+++++++++..............+. +.++.... ...........+++
T Consensus 76 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~~ 144 (511)
T 3e7w_A 76 GHPYIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDAVGQQIQTVS-----AEELLENE------GGSVSQDQWVKEHE 144 (511)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTCCCCSSCEEE-----HHHHHTSC------SCCCCGGGSCCTTS
T ss_pred CCEEEecCCCChHHHHHHHHHhCCCCEEEecccccchhcccccceec-----Hhhhhccc------cCCccccccCCCCC
Confidence 99999999999999999999999999999976433221111111111 11111110 01112223456789
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---CCH
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK---FDF 264 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~---~~~ 264 (349)
+++|+|||||||.||||++||+++...+......++ +.+++++++..|++|.+++..++.++..|+++++.+. +++
T Consensus 145 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 223 (511)
T 3e7w_A 145 TFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFP-VSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKDAVNKP 223 (511)
T ss_dssp EEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHST-TTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHSH
T ss_pred eEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcC-CCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChhhhcCH
Confidence 999999999999999999999999999988888887 7899999999999999999889999999999999975 689
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCce
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGAP 340 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~~ 340 (349)
..+++.++++++|++.++|++++.++..+ ......++++|.+++||+++++++.+++.+.||+. +.|++||.|..
T Consensus 224 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~ 301 (511)
T 3e7w_A 224 KVLFEELKKSGLNVWTSTPSFVQMCLMDP-GFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVA 301 (511)
T ss_dssp HHHHHHHHHHCCSEEEECHHHHHHHHTST-TCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSC
T ss_pred HHHHHHHHHcCCcEEEecHHHHHHHHhcc-ccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheee
Confidence 99999999999999999999999999887 66777889999999999999999999999999654 34566776543
No 16
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.4e-44 Score=347.69 Aligned_cols=301 Identities=20% Similarity=0.213 Sum_probs=243.1
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCC----CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTA----SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
++.++|..++ +.+ |+++|+++.. .++++||+||.++++++|+.|++ .|+++||+|+|+++|++++++++|||
T Consensus 77 ~~~~~l~~~a--~~~-pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~~~~e~vva~lA~ 152 (652)
T 1pg4_A 77 LAANCLDRHL--QEN-GDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLD-LGIKKGDVVAIYMPMVPEAAVAMLAC 152 (652)
T ss_dssp HHHHHTGGGH--HHH-TTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHH-HTCCTTCEEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHh--ccC-CCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 4677888888 778 9999999731 34789999999999999999998 99999999999999999999999999
Q ss_pred HhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc-------------cccc---C-cceEEeCCCC--------
Q 045351 105 FSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK-------------IPQL---K-YGTVLLDSPE-------- 159 (349)
Q Consensus 105 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-------------~~~~---~-~~~~~~~~~~-------- 159 (349)
+++|++++|+++..+.+++.+++++++++++|+++..... +... . ..++.++...
T Consensus 153 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 232 (652)
T 1pg4_A 153 ARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEG 232 (652)
T ss_dssp HHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBT
T ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCC
Confidence 9999999999999999999999999999999998764321 0111 1 1234443211
Q ss_pred ----ccccccccCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEe
Q 045351 160 ----FEPLSATDSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCT 234 (349)
Q Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~ 234 (349)
+.++... ...........++++++|+|||||||.||||+++|++++..+.. ....++ +.++|++++.
T Consensus 233 ~~~~~~~~~~~-------~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~l~~ 304 (652)
T 1pg4_A 233 RDLWWRDLIEK-------ASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFD-YHPGDIYWCT 304 (652)
T ss_dssp TEEEHHHHHTT-------SCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTT-CCTTCEEEEC
T ss_pred CceeHHHHHhh-------cCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcC-CCCCCEEEEc
Confidence 0111110 01111122456789999999999999999999999999876643 344455 7899999999
Q ss_pred cChhhHhhH-HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchhee
Q 045351 235 VPYFHSYGF-TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVV 307 (349)
Q Consensus 235 ~p~~~~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i 307 (349)
.|++|+.|+ ..++.+|+.|+++++.+. +++..+++.|+++++|+++++|++++.|.+.. . ....++++||.+
T Consensus 305 ~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~~~l~sLr~i 383 (652)
T 1pg4_A 305 ADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEG-DKAIEGTDRSSLRIL 383 (652)
T ss_dssp SCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTG-GGGTTTCCCTTCCEE
T ss_pred cCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcC-ccccccCCcCceEEE
Confidence 999999999 778899999999999864 58999999999999999999999999999864 3 345678999999
Q ss_pred hccCCCCCHHHHHHHHHHcC-----CcccccccccCceee
Q 045351 308 ASGGAHLTLSVIRKYLQLNR-----TVNRQLCLEFGAPII 342 (349)
Q Consensus 308 ~~gG~~l~~~~~~~~~~~~~-----~~~~~~~~~~G~~~i 342 (349)
++||+++++++++++.+.++ ..+.|+.||.|+.++
T Consensus 384 ~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~ 423 (652)
T 1pg4_A 384 GSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMI 423 (652)
T ss_dssp EEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSB
T ss_pred EEecCCCCHHHHHHHHHHhCCCCCcEEccccCccccccee
Confidence 99999999999999999886 234456677664433
No 17
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.9e-43 Score=335.90 Aligned_cols=297 Identities=20% Similarity=0.215 Sum_probs=236.8
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG 108 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 108 (349)
++.+++...+ + + |+++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|++++++++|||+++|
T Consensus 25 ~~~~~l~~~~--~-~-p~~~A~~~~--~~~~Ty~el~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 97 (529)
T 2v7b_A 25 FAAYLFRLNE--T-R-AGKTAYIDD--TGSTTYGELEERARRFASALRT-LGVHPEERILLVMLDTVALPVAFLGALYAG 97 (529)
T ss_dssp HHHHHHHHTG--G-G-TTSEEEECS--SCEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSTHHHHHHHHHHHHT
T ss_pred HHHHHHHhhh--c-c-CCceEEEeC--CCCccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC
Confidence 4888888888 8 8 999999987 7899999999999999999998 999999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-------CcceEEeCCCC--------ccccccccCCCCCC
Q 045351 109 VVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-------KYGTVLLDSPE--------FEPLSATDSLDYYD 173 (349)
Q Consensus 109 ~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~--------~~~~~~~~~~~~~~ 173 (349)
++++|+++..+.+++.++++.+++++++++....+.+... ...++..+... +.++....
T Consensus 98 ~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 171 (529)
T 2v7b_A 98 VVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLFEELIDAA------ 171 (529)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBHHHHHHTS------
T ss_pred ceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccchhhhhccC------
Confidence 9999999999999999999999999999988755433221 12233333211 11111100
Q ss_pred CCccccccccCCCCcEEEEeccCCCCCCceeeechhhH-HHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhh
Q 045351 174 DDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNL-VAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLG 251 (349)
Q Consensus 174 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l-~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~ 251 (349)
..........++++++|+|||||||.||||++||+++ ..........++ +.+++++++..|++|.+|+ ..++.++.
T Consensus 172 -~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 249 (529)
T 2v7b_A 172 -APAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILG-IAENDVVFSAAKLFFAYGLGNGLTFPLS 249 (529)
T ss_dssp -CCCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCC-CCTTCEEEESSCTTSHHHHHHHTHHHHH
T ss_pred -CCcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccC-CCCCcEEEEeecHHHHHHHHHHHHHHHh
Confidence 1111122456799999999999999999999999999 666655555566 7899999999999999999 45678999
Q ss_pred cCCEEEEc-CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC--C
Q 045351 252 MGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--T 328 (349)
Q Consensus 252 ~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~ 328 (349)
.|+++++. +.+++..+++.++++++|++.++|+++..|++.. ........++|.+++||+++++++.+++.+.++ .
T Consensus 250 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i 328 (529)
T 2v7b_A 250 VGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSP-NLPARADVAIRICTSAGEALPREIGERFTAHFGCEI 328 (529)
T ss_dssp HTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCT-TCCCGGGCCCCEEEECSSCCCHHHHHHHHHHHSCCE
T ss_pred cCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCc-ccccccCCceEEEEEcCCCCCHHHHHHHHHHhCCce
Confidence 99999988 6789999999999999999999999999999875 433331248999999999999999999999874 3
Q ss_pred cccccccccCcee
Q 045351 329 VNRQLCLEFGAPI 341 (349)
Q Consensus 329 ~~~~~~~~~G~~~ 341 (349)
.+.|+.+|.+...
T Consensus 329 ~~~YG~TE~~~~~ 341 (529)
T 2v7b_A 329 LDGIGSTEMLHIF 341 (529)
T ss_dssp EEEEECTTTSSEE
T ss_pred eeeEchhhcCcee
Confidence 3445667765433
No 18
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=5.7e-44 Score=337.29 Aligned_cols=296 Identities=23% Similarity=0.255 Sum_probs=242.1
Q ss_pred hhhhcccCCCCCCCCCeEEEeC-CCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 32 SYVFSLLESHAPPPDTTALIDT-ASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 32 ~~l~~~~~~~~~~~~~~ai~~~-~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
+++...+ +++ |++.|++.. .+++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++
T Consensus 4 ~l~~~~a--~~~-p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 79 (503)
T 4fuq_A 4 NLFARLF--DKL-DDPHKLAIETAAGDKISYAELVARAGRVANVLVA-RGLQVGDRVAAQTEKSVEALVLYLATVRAGGV 79 (503)
T ss_dssp CHHHHHH--SCC-SCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSCHHHHHHHHHHHHTTCE
T ss_pred hHHHHHH--HhC-CCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 4566777 777 888888731 237899999999999999999998 99999999999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----cCcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 111 VSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----LKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 111 ~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
++|+++..+.+++.++++.+++++++++....+.+.. ....+..++......+...... ...........++
T Consensus 80 ~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 155 (503)
T 4fuq_A 80 YLPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRGSLTDAAAG----ASEAFATIDRGAD 155 (503)
T ss_dssp EEECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTTSCSHHHHHHHT----SCSCCCCCCCCTT
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCCcccccchhhhc----CCCCcCcCCCCCC
Confidence 9999999999999999999999999999876554432 1223333332221111100000 1111122356789
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFG 265 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~ 265 (349)
++++|+|||||||.||||++||+++.+.+......++ +.+++++++.+|++|.+|+ ...+.+++.|+++++.+++++.
T Consensus 156 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~ 234 (503)
T 4fuq_A 156 DLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWR-FTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPD 234 (503)
T ss_dssp SEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTT-CCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHH
T ss_pred CeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhC-CCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHH
Confidence 9999999999999999999999999999988888887 7999999999999999998 5677899999999999999999
Q ss_pred HHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cccccccccCc
Q 045351 266 RMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQLCLEFGA 339 (349)
Q Consensus 266 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~~~~~G~ 339 (349)
.+++.++ ++|+++++|+++..|++.+ .....+++++|.+++||+++++++.++|.+.++. .+.|+.||.|.
T Consensus 235 ~~~~~i~--~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~ 307 (503)
T 4fuq_A 235 KILDLMA--RATVLMGVPTFYTRLLQSP-RLTKETTGHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNM 307 (503)
T ss_dssp HHHHHHT--TCCEEEECHHHHHHHHTCT-TCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEE
T ss_pred HHHHHHh--hcCEEEEHHHHHHHHHhCC-CccccchhhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCc
Confidence 9999998 8999999999999999987 6677778999999999999999999999999853 34456666653
No 19
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=1.7e-43 Score=343.87 Aligned_cols=309 Identities=16% Similarity=0.169 Sum_probs=244.2
Q ss_pred chhhhhhcccCCCCCCCCCeEEEeC----CCCceeeHHHHHHHHHHHHHHHh-hhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 29 SVTSYVFSLLESHAPPPDTTALIDT----ASRHRILYPDLTLRIKTLAYSLK-TKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 29 tl~~~l~~~~~~~~~~~~~~ai~~~----~~~~~~Ty~~l~~~~~~~a~~L~-~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
++.++|..++ +.+ |+++|+++. ..++++||+||.+++.++|+.|+ + .|+++||+|+|+++|++++++++||
T Consensus 83 ~~~~~l~~~a--~~~-pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~-~Gv~~Gd~V~i~~~~~~e~v~a~lA 158 (663)
T 1ry2_A 83 ACYNCVDRHA--LKT-PNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYS-MGVRKGDTVAVYMPMVPEAIITLLA 158 (663)
T ss_dssp HHHHHTHHHH--TTC-TTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHT-SCCCTTCEEEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHh--ccC-CCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 5778888888 889 999999973 23589999999999999999999 8 9999999999999999999999999
Q ss_pred HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccc---------c----ccc-C-cceEEeCCCCc--cccccc
Q 045351 104 LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHK---------I----PQL-K-YGTVLLDSPEF--EPLSAT 166 (349)
Q Consensus 104 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~---------~----~~~-~-~~~~~~~~~~~--~~~~~~ 166 (349)
|+++|++++|+++..+.+++.+++++++++++|+++..... + ... . ..+++++.... ......
T Consensus 159 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 238 (663)
T 1ry2_A 159 ISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAP 238 (663)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSS
T ss_pred HHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCC
Confidence 99999999999999999999999999999999998764321 1 110 1 12343332110 000000
Q ss_pred ----cCCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhh-hhccccCCCCCcEEEEecChhhHh
Q 045351 167 ----DSLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAG-GHAVRAARSRPAVVLCTVPYFHSY 241 (349)
Q Consensus 167 ----~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~l~~~p~~~~~ 241 (349)
..................++++++|+|||||||.||||+++|++++..+.. ....++ +.++|++++..|++|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~ 317 (663)
T 1ry2_A 239 RDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFD-THQEDVFFTAGDIGWIT 317 (663)
T ss_dssp SEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSC-CCSSCEEEECSCTTSHH
T ss_pred ccccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcC-CCCCcEEEEcCCcHHhh
Confidence 000000001111123456799999999999999999999999998876643 344455 68999999999999999
Q ss_pred hH-HHHHhhhhcCCEEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCC--CCCCCCcchheehccCCCC
Q 045351 242 GF-TCCLRSLGMGESLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGT--MDGYDLSSIEVVASGGAHL 314 (349)
Q Consensus 242 g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~--~~~~~l~~lr~i~~gG~~l 314 (349)
|+ +.++.+|+.|+++++.+. +++..+++.|+++++|+++++|++++.|.+.. . ....++++||.+++||+++
T Consensus 318 g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~~~l~sLr~i~~gGe~l 396 (663)
T 1ry2_A 318 GHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAG-DSYIENHSLKSLRCLGSVGEPI 396 (663)
T ss_dssp HHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSC-TTSSSSCCCTTCCEEEECSSCC
T ss_pred hhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcC-ccccccCCcCceEEEEEEcCCC
Confidence 99 778899999999999864 58999999999999999999999999998875 3 3566799999999999999
Q ss_pred CHHHHHHHHHHcC-----CcccccccccCceeee
Q 045351 315 TLSVIRKYLQLNR-----TVNRQLCLEFGAPIIS 343 (349)
Q Consensus 315 ~~~~~~~~~~~~~-----~~~~~~~~~~G~~~i~ 343 (349)
++++++++.+.++ ..+.|+.||.|+.++.
T Consensus 397 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~ 430 (663)
T 1ry2_A 397 AAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVT 430 (663)
T ss_dssp CHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEE
T ss_pred CHHHHHHHHHHhCCCCceEEEeECCccccCeeec
Confidence 9999999999875 2344566777654443
No 20
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1e-43 Score=339.60 Aligned_cols=289 Identities=15% Similarity=0.190 Sum_probs=240.1
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
+.|+.++|..++ +++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 38 ~~~l~~~l~~~a--~~~-p~~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 111 (563)
T 1amu_A 38 DKTIHQLFEEQV--SKR-PNNVAIVCE--NEQLTYHELNVKANQLARIFIE-KGIGKDTLVGIMMEKSIDLFIGILAVLK 111 (563)
T ss_dssp TCCHHHHHHHHH--HHC-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHH--HHC-CCCeEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 368999999999 899 999999987 7899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC--cceEEeCCCCccccccccCCCCCCCCccccccccC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK--YGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVS 184 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
+|++++|+++..+.+++.++++.++++++|++.+....+.... ..+..++...+.. ...........
T Consensus 112 ~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 180 (563)
T 1amu_A 112 AGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEEDTIKI-----------REGTNLHVPSK 180 (563)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECCCSTTTT-----------SCCSCCCCCCC
T ss_pred hCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccccCceeeecchhhcc-----------ccCccCCCCCC
Confidence 9999999999999999999999999999999886544433221 1222222211110 00011122456
Q ss_pred CCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCC---
Q 045351 185 LSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGK--- 261 (349)
Q Consensus 185 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~--- 261 (349)
++++++|+|||||||.||||++||+++.+.+......++ +.++|++++..|++|..++..++.+|+.|+++++.+.
T Consensus 181 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~~~ 259 (563)
T 1amu_A 181 STDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLN-VTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTI 259 (563)
T ss_dssp TTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSC-CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCHHHH
T ss_pred CCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcC-CCCCCEEEEeCCccHHHHHHHHHHHHHCCCEEEEcChHhh
Confidence 789999999999999999999999999998887777777 7899999999999999999888999999999999975
Q ss_pred CCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCcccccccccCce
Q 045351 262 FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGAP 340 (349)
Q Consensus 262 ~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~~ 340 (349)
+++..+++.++++++|++.++|+++..|... .++++|.+++||+++++++.+++.+..+..+.|+.||.|..
T Consensus 260 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~YG~TE~~~~ 331 (563)
T 1amu_A 260 NDFVKFEQYINQKEITVITLPPTYVVHLDPE-------RILSIQTLITAGSATSPSLVNKWKEKVTYINAYGPTETTIC 331 (563)
T ss_dssp TCHHHHHHHHHHTTCCEEEECHHHHTTSCTT-------TCCSCSEEEEESSCCCHHHHHHHTTTSEEEEEECCGGGSSC
T ss_pred cCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc-------ccccccEEEEEEecCCHHHHHHHHhCCeEEEEECcCHHhHh
Confidence 6999999999999999999999998766432 36789999999999999999999887666666778887643
No 21
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=6.4e-43 Score=335.16 Aligned_cols=308 Identities=13% Similarity=0.127 Sum_probs=244.4
Q ss_pred Ccchh-hhhhcccCCCCCCCCCeEEEeCC---CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHH
Q 045351 27 TTSVT-SYVFSLLESHAPPPDTTALIDTA---SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYL 102 (349)
Q Consensus 27 ~~tl~-~~l~~~~~~~~~~~~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~l 102 (349)
+.|+. ++|..++ +.+ |+++|+++.+ .++++||+||.++++++|+.|++ .|+++||+|+|+++|++++++++|
T Consensus 54 ~~n~~~~~l~~~a--~~~-pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~-~Gv~~Gd~V~l~~~~~~e~~~~~l 129 (580)
T 3etc_A 54 NFNFAYDVVDVYA--RDS-PEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVK-HGIGKGDYVMLTLKSRYDFWYCML 129 (580)
T ss_dssp SCCHHHHTHHHHH--HHC-TTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECTTCTHHHHHHH
T ss_pred cchHHHHHHHHHH--hhC-CCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHH
Confidence 35665 9999999 889 9999999621 24799999999999999999998 999999999999999999999999
Q ss_pred HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccc--ccccc-------cCcceEEeCCCC---ccccccccCCC
Q 045351 103 SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTA--HKIPQ-------LKYGTVLLDSPE---FEPLSATDSLD 170 (349)
Q Consensus 103 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~--~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~ 170 (349)
||+++|++++|+++..+.+++.++++.++++++|++.+.. ..+.. .....+.++... +.++.......
T Consensus 130 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (580)
T 3etc_A 130 GLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFRKELEES 209 (580)
T ss_dssp HHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHHHHHHHS
T ss_pred HHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHHHHHhhC
Confidence 9999999999999999999999999999999999987643 22221 112344444221 11111110000
Q ss_pred CCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH-HHHhh
Q 045351 171 YYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT-CCLRS 249 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~ 249 (349)
..............++++++|+|||||||.||||.++|.+++..+........ +.+++++++..|++|..+++ .++.+
T Consensus 210 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (580)
T 3etc_A 210 SPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQN-VEDDGLHYTVADSGWGKCVWGKLYGQ 288 (580)
T ss_dssp CSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSC-CCTTCEEEECCCTTSTHHHHHTTHHH
T ss_pred CcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhC-CCCCceEEEeCChHHHHHHHHHHHHH
Confidence 00000011113567899999999999999999999999999888776555555 68899999999999988884 57789
Q ss_pred hhcCCEEEEc--CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC
Q 045351 250 LGMGESLVCM--GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR 327 (349)
Q Consensus 250 l~~G~~~v~~--~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~ 327 (349)
+..|+++++. .++++..+++.|+++++|+++++|++++.|.+. .....++++||.+++||+++++++.++|.+.++
T Consensus 289 l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~--~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~g 366 (580)
T 3etc_A 289 WIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE--DLSHYNFSTLKYAVVAGEPLNPEVFNRFLEFTG 366 (580)
T ss_dssp HHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS--CC---CCTTCCEEEECSSCCCHHHHHHHHHHHS
T ss_pred HhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc--ccccCCCccceEEEEccCCCCHHHHHHHHHHhC
Confidence 9999999988 578999999999999999999999999999886 556677899999999999999999999999874
Q ss_pred --CcccccccccCcee
Q 045351 328 --TVNRQLCLEFGAPI 341 (349)
Q Consensus 328 --~~~~~~~~~~G~~~ 341 (349)
..+.|+.||.+..+
T Consensus 367 ~~i~~~YG~TE~~~~~ 382 (580)
T 3etc_A 367 IKLMEGFGQTETVVTI 382 (580)
T ss_dssp CCCEEEECCTTSSCCE
T ss_pred CeEeccccccccccee
Confidence 33446677775443
No 22
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-43 Score=334.24 Aligned_cols=302 Identities=21% Similarity=0.251 Sum_probs=241.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.++|..++ +++ |+++|+++. ++++||+||.++++++|+.|++ . +||+|+++++|+++++++++||+++
T Consensus 1 mtl~~~l~~~a--~~~-pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~-~---~gd~V~i~~~n~~e~~~~~lA~~~~ 71 (501)
T 3ipl_A 1 MSLDFWLYKQA--QQN-GHHIAITDG--QESYTYQNLYCEASLLAKRLKA-Y---QQSRVGLYIDNSIQSIILIHACWLA 71 (501)
T ss_dssp --CCCHHHHHH--HHH-TTSEEEECS--SCEEEHHHHHHHHHHHHHHHHT-T---CCSEEEEECCSSHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH--Hhc-CCceEEEeC--CcEEEHHHHHHHHHHHHHHHHH-c---CCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 47889999999 999 999999997 7999999999999999999998 5 8999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc----CcceEEeC--CCCc------cccccccCCCCCC-C
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL----KYGTVLLD--SPEF------EPLSATDSLDYYD-D 174 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~--~~~~------~~~~~~~~~~~~~-~ 174 (349)
|++++|+++..+.+++.++++.+++++++++.......... ........ .... ............. .
T Consensus 72 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (501)
T 3ipl_A 72 NIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKES 151 (501)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC--------------------------------CC
T ss_pred CCEEEecCccCCHHHHHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccccchhhccccCC
Confidence 99999999999999999999999999999987655433210 00000000 0000 0000000000000 0
Q ss_pred CccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCC
Q 045351 175 DEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGE 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~ 254 (349)
..........++++++|+|||||||.||||++||+++...+......++ +.+++++++..|++|.+|+..++.+++.|+
T Consensus 152 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~ 230 (501)
T 3ipl_A 152 PSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLG-FDRDTNWLSVLPIYHISGLSVLLRAVIEGF 230 (501)
T ss_dssp HHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTC-CCTTCEEEECSCTTSHHHHHHHHHHHHHTC
T ss_pred cccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhC-CCccCEEEEeCcHHHHHHHHHHHHHHHcCc
Confidence 0111223457899999999999999999999999999999988888887 789999999999999999988899999999
Q ss_pred EEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHH-cCCccccc
Q 045351 255 SLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQL-NRTVNRQL 333 (349)
Q Consensus 255 ~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~-~~~~~~~~ 333 (349)
++++.+++++..+++.|+++++|++.++|++++.|.+.. .... .+||.+++||+++++++.+++.+. .+..+.|+
T Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~---~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~YG 306 (501)
T 3ipl_A 231 TVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQG-LHEP---YNLQKILLGGAKLSATMIETALQYNLPIYNSFG 306 (501)
T ss_dssp EEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHT-CCSC---TTCCEEEECSSCCCHHHHHHHHHTTCCEEEEEE
T ss_pred eEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcC-CCCc---CcccEEEEeCCCCCHHHHHHHHHhCCCEecccc
Confidence 999999999999999999999999999999999999886 4333 289999999999999999999873 23445567
Q ss_pred ccccCceeee
Q 045351 334 CLEFGAPIIS 343 (349)
Q Consensus 334 ~~~~G~~~i~ 343 (349)
.+|.|+.++.
T Consensus 307 ~TE~~~~~~~ 316 (501)
T 3ipl_A 307 MTETCSQFLT 316 (501)
T ss_dssp EGGGTEEEEE
T ss_pred ccccccceee
Confidence 7887754443
No 23
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=6.4e-43 Score=330.81 Aligned_cols=294 Identities=20% Similarity=0.192 Sum_probs=244.0
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
+|+.++|..++ +++ ||++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||+++
T Consensus 6 ~tl~~~l~~~a--~~~-pd~~Al~~~--~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 79 (509)
T 3ivr_A 6 FTLADVYRRNA--ALF-PDRTAFMVD--GVRLTHRDYLARAERLASGLLR-DGVHTGDRVAILSQNCSEMIELIGAVALI 79 (509)
T ss_dssp CCHHHHHHHHH--HHS-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH--HHC-CCceEEEEC--CcEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHh
Confidence 89999999999 999 999999997 8999999999999999999998 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-Cc-ceEEeCCC--CccccccccCCCCCCCCcccc
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KY-GTVLLDSP--EFEPLSATDSLDYYDDDEERV 179 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 179 (349)
|++++|+++..+.+++.++++.+++++++++....+.+.. . .. .++.++.. .+..+.... ......
T Consensus 80 Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 153 (509)
T 3ivr_A 80 GAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSGPFAPFKDLA------SDTPFS 153 (509)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCCSSCEEGGGTC------CCSCCC
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCCcChhhHhhcc------CCCCCC
Confidence 9999999999999999999999999999999876544211 1 11 23333221 122221100 111122
Q ss_pred ccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 180 RVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 180 ~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
.....++++++|+|||||||.||||++||+++...+......++ +.+++++++.+|++|.+|+...+.+++.|++.++.
T Consensus 154 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~ 232 (509)
T 3ivr_A 154 APEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWR-LTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIA 232 (509)
T ss_dssp CCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTT-CCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred cCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhC-CCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEe
Confidence 33567899999999999999999999999999999988888887 79999999999999999997777777777777777
Q ss_pred CCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccc
Q 045351 260 GKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLE 336 (349)
Q Consensus 260 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~ 336 (349)
..+++..+++.|+++++|++.++|.++..|++.. ...+++++|.+..||++ +..+++.+.+|+. +.|+.||
T Consensus 233 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE 306 (509)
T 3ivr_A 233 AKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA---APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSE 306 (509)
T ss_dssp SSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC---CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGG
T ss_pred cccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc---cccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccc
Confidence 7899999999999999999999999999999874 44567899999999987 8889999998654 3356677
Q ss_pred cCce
Q 045351 337 FGAP 340 (349)
Q Consensus 337 ~G~~ 340 (349)
.|..
T Consensus 307 ~~~~ 310 (509)
T 3ivr_A 307 TSGL 310 (509)
T ss_dssp GTEE
T ss_pred cccc
Confidence 6643
No 24
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=2.6e-43 Score=334.48 Aligned_cols=294 Identities=17% Similarity=0.187 Sum_probs=245.1
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.|+.+.|...+ +.+ |+++|+.+. ++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 4 ~~l~~~l~~~a--~~~-p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 77 (521)
T 3l8c_A 4 KDMIDSIEQFA--QTQ-ADFPVYDCL--GERRTYGQLKRDSDSIAAFIDS-LALLAKSPVLVFGAQTYDMLATFVALTKS 77 (521)
T ss_dssp CCHHHHHHHHH--HHS-TTSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TCCCTTCCEEEEECSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--HHC-CCCcceecC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 58999999999 999 999999997 8999999999999999999999 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLSD 187 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|++++|+++..+.+++.++++.+++++++++++....+.. ...+... ++...... ...........+++
T Consensus 78 G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~~--~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~d 146 (521)
T 3l8c_A 78 GHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIEG--ISLVSLS-----EIESAKLA----EMPYERTHSVKGDD 146 (521)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCTT--SEEEEHH-----HHHHHHHH----TCCCCCSSCCCTTS
T ss_pred CCEEEecCccccHHHHHHHHHhCCCCEEEecCcccccccc--Ccccchh-----hhhhcccc----cCCcccCCCCCCCC
Confidence 9999999999999999999999999999998865543322 1111111 01000000 01111223467799
Q ss_pred cEEEEeccCCCCCCceeeechhhHHHHHhhhhcc--ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCC---
Q 045351 188 PAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV--RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKF--- 262 (349)
Q Consensus 188 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~--- 262 (349)
+++|+|||||||.||||++||+++...+...... +. ...++++++..|++|..++..++.++..|+++++.+.+
T Consensus 147 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 225 (521)
T 3l8c_A 147 NYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFD-VPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPKELVA 225 (521)
T ss_dssp EEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTC-CCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECCGGGTT
T ss_pred cEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccC-CCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcCHHHhh
Confidence 9999999999999999999999999887766554 44 67889999999999999998889999999999999754
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccCc
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G~ 339 (349)
++..+++.+.++++|++.++|+++..+.... .....+++++|.+++||+++++++.+++.+.+++. +.|++||.|.
T Consensus 226 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~ 304 (521)
T 3l8c_A 226 DFKQLFTTIAQLPVGIWTSTPSFADMAMLSD-DFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATV 304 (521)
T ss_dssp CHHHHHHHHHHSCCSEEEECHHHHHHHHTST-TCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSS
T ss_pred CHHHHHHHHHHcCCcEEEeCCCHHHHHhhhh-ccccccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhh
Confidence 8999999999999999999999999998886 66677889999999999999999999999998654 3456677654
Q ss_pred e
Q 045351 340 P 340 (349)
Q Consensus 340 ~ 340 (349)
.
T Consensus 305 ~ 305 (521)
T 3l8c_A 305 A 305 (521)
T ss_dssp C
T ss_pred h
Confidence 3
No 25
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=1.3e-42 Score=335.76 Aligned_cols=299 Identities=19% Similarity=0.179 Sum_probs=244.0
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
+.|+.++|..++ . ||++|+++. ++++||+||.++++++|+.|++ .|+++||+|+++++|++++++++|||++
T Consensus 26 ~~~l~~~~~~~a----~-pd~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~V~l~~~~s~~~vva~lA~l~ 97 (617)
T 3rg2_A 26 DLPLTDILTRHA----A-SDSIAVIDG--ERQLSYRELNQAADNLACSLRR-QGIKPGETALVQLGNVAELYITFFALLK 97 (617)
T ss_dssp CCCTTHHHHTTT----T-CCSEEEEET--TEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHhh----C-CCCeEEecC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHh
Confidence 489999999988 4 799999997 8999999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccc---------c-cCcc-eEEeCCCCccccccccCCCCCCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIP---------Q-LKYG-TVLLDSPEFEPLSATDSLDYYDDD 175 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~---------~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+|++++|+++..+.+++.++++.+++++++++........ . .... +...+......+...... ..
T Consensus 98 aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 173 (617)
T 3rg2_A 98 LGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINH----PA 173 (617)
T ss_dssp HTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCSTTBHHHHHHS----CC
T ss_pred cCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccccchhhhhcc----cc
Confidence 9999999999999999999999999999999876431110 0 1112 222222111111100000 11
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHH--HHHhhhhcC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFT--CCLRSLGMG 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~--~~~~~l~~G 253 (349)
.........++++++|+|||||||.||||+++|+++.+.+......++ +.+++++++.+|++|.+++. .++.+++.|
T Consensus 174 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G 252 (617)
T 3rg2_A 174 EDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQ-FTQQTRYLCAIPAAHNYAMSSPGSLGVFLAG 252 (617)
T ss_dssp SSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHT-CCTTCEEEECSCTTSHHHHHSSHHHHHHHHT
T ss_pred cccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcC-CCCcceEEEeccchhhhhhhHHHHHHHHHcC
Confidence 111223456789999999999999999999999999999988888887 78999999999999999884 689999999
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcC-CCCCCCCCcchheehccCCCCCHHHHHHHHHHcCC--cc
Q 045351 254 ESLVCMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDG-GTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT--VN 330 (349)
Q Consensus 254 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~-~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~ 330 (349)
+++++.+.+++..+++.++++++|++.++|+++..+.+.. ......++++||.+++||+++++++.+++.+.++. .+
T Consensus 253 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~ 332 (617)
T 3rg2_A 253 GTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQ 332 (617)
T ss_dssp CEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHTCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHhCCcEEE
Confidence 9999999899999999999999999999999999998753 02233468999999999999999999999998853 23
Q ss_pred cccccccC
Q 045351 331 RQLCLEFG 338 (349)
Q Consensus 331 ~~~~~~~G 338 (349)
.|+.+|.+
T Consensus 333 ~YG~tE~~ 340 (617)
T 3rg2_A 333 VFGMAEGL 340 (617)
T ss_dssp EEEETTEE
T ss_pred EeccCcce
Confidence 34455543
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=1.6e-43 Score=340.86 Aligned_cols=300 Identities=17% Similarity=0.180 Sum_probs=247.5
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC--CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA--SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~--~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 105 (349)
+|+.++|..++ ..+ |+++|+++.+ .++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+
T Consensus 11 ~tl~~~l~~~a--~~~-p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~ 86 (590)
T 3kxw_A 11 QSLVDVVRLRA--LHS-PNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQA-EGAKPGDRVLLLFAPGLPLIQAFLGCL 86 (590)
T ss_dssp SSHHHHHHHHH--HHC-TTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEEECCSSHHHHHHHHHHH
T ss_pred ccHHHHHHHHH--HhC-CCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHHHH
Confidence 89999999999 999 9999998642 35899999999999999999998 999999999999999999999999999
Q ss_pred hcCCeEecCCCCC---CHHHHHHHHhhcCCeEEEEcCcccccccccC-------cceEEeCCCCccccccccCCCCCCCC
Q 045351 106 SLGVVVSPCNPSC---TIPEILRQIHLSKPVIAFATHDTAHKIPQLK-------YGTVLLDSPEFEPLSATDSLDYYDDD 175 (349)
Q Consensus 106 ~~G~~~v~i~~~~---~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
++|++++|+++.. +.+++.++++.+++++++++.+....+.... ..+..+.. ..+... ..
T Consensus 87 ~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~ 156 (590)
T 3kxw_A 87 YAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAIAL---ESIELN-------RS 156 (590)
T ss_dssp HTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEEEG---GGCCGG-------GG
T ss_pred HhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccceeec---hhcccc-------cc
Confidence 9999999999988 4578999999999999999876554433211 01111110 011000 01
Q ss_pred ccccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHH-HHhhhhcCC
Q 045351 176 EERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTC-CLRSLGMGE 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~ 254 (349)
.........++++++|+|||||||.||||++||+++...+......++ +.+++++++.+|++|.+|+.. ++.+++.|+
T Consensus 157 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~ 235 (590)
T 3kxw_A 157 SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFH-MNDETIIFSWLPPHHDMGLIGCILTPIYGGI 235 (590)
T ss_dssp GGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTT-CCTTCEEEECSCTTSHHHHHTTTHHHHHHTC
T ss_pred ccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhC-CCCcCeEEEecCCCcchhhHHHHHHHHhcCc
Confidence 111223567899999999999999999999999999999998888887 789999999999999999954 889999999
Q ss_pred EEEEcCCC----CHHHHHHHHHhhcccEEEechHHHHHHHhcCC--CCCCCCCcchheehccCCCCCHHHHHHHHHHcCC
Q 045351 255 SLVCMGKF----DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG--TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT 328 (349)
Q Consensus 255 ~~v~~~~~----~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 328 (349)
++++.+++ ++..+++.|+++++|++.++|.++..+.+... .....++++||.+++||+++++++.+++.+.++.
T Consensus 236 ~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~ 315 (590)
T 3kxw_A 236 QAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKE 315 (590)
T ss_dssp EEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGG
T ss_pred eEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 99999865 89999999999999999999999999887530 3445678999999999999999999999998842
Q ss_pred --------cccccccccCceee
Q 045351 329 --------VNRQLCLEFGAPII 342 (349)
Q Consensus 329 --------~~~~~~~~~G~~~i 342 (349)
.+.|+.||.|..+.
T Consensus 316 ~g~~~~~~~~~YG~TE~~~~~~ 337 (590)
T 3kxw_A 316 FGFRKEAFYPCYGLAEATLLVT 337 (590)
T ss_dssp GTCCGGGEEEEEECGGGSSEEE
T ss_pred cCCCccccccccccccccceee
Confidence 34466777765443
No 27
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=4.2e-42 Score=328.98 Aligned_cols=295 Identities=15% Similarity=0.150 Sum_probs=239.1
Q ss_pred chhhhhhcccCCCC-----CCCCCeEEEeCC---CCceeeHHHHHHHHHHHHHHHhhhc-CCCCCCEEEEEcCCCchHHH
Q 045351 29 SVTSYVFSLLESHA-----PPPDTTALIDTA---SRHRILYPDLTLRIKTLAYSLKTKY-KLSKYDVAFLLSQNSVRVPV 99 (349)
Q Consensus 29 tl~~~l~~~~~~~~-----~~~~~~ai~~~~---~~~~~Ty~~l~~~~~~~a~~L~~~~-g~~~gd~V~i~~~n~~~~~~ 99 (349)
++.+++..++ .. + |+++|+++.+ .++++||+||.++++++|+.|.+ . |+++||+|+|+++|++++++
T Consensus 39 ~~~~~l~~~a--~~~~a~~~-p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~~Gv~~gd~V~i~~~n~~e~~~ 114 (570)
T 3c5e_A 39 FASDVLDHWA--DMEKAGKR-PPSPALWWVNGKGKELMWNFRELSENSQQAANVLSG-ACGLQRGDRVAVVLPRVPEWWL 114 (570)
T ss_dssp HHHHTHHHHH--HHHHTTSS-CCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHT-TTCCCTTCEEEEECCSCHHHHH
T ss_pred HHHHHHHHHH--hhccccCC-CCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHH-ccCCCCCCEEEEEcCCCHHHHH
Confidence 4578888888 76 8 9999999732 24789999999999999999998 7 99999999999999999999
Q ss_pred HHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccc----c-Cc-ceEEeCCCC------cccccccc
Q 045351 100 LYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQ----L-KY-GTVLLDSPE------FEPLSATD 167 (349)
Q Consensus 100 ~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~----~-~~-~~~~~~~~~------~~~~~~~~ 167 (349)
++|||+++|++++|+++..+.+++.++++.++++++|++.+..+.+.. . .. .++.++... +.++....
T Consensus 115 ~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (570)
T 3c5e_A 115 VILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEA 194 (570)
T ss_dssp HHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEHHHHHHHS
T ss_pred HHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccHHHHhhcc
Confidence 999999999999999999999999999999999999998876544322 1 11 233333211 11111110
Q ss_pred CCCCCCCCccccccccCCCCcEEEEeccCCCCCCceeeechhhHHH--HHhhhhccccCCCCCcEEEEecChhhHhhHH-
Q 045351 168 SLDYYDDDEERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVA--AVAGGHAVRAARSRPAVVLCTVPYFHSYGFT- 244 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~--~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~- 244 (349)
..........++++++|+|||||||.||||+++|+ ++. ..... ..++ +.+++++++..|++|.+++.
T Consensus 195 -------~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~-~~~~d~~~~~~p~~~~~~~~~ 264 (570)
T 3c5e_A 195 -------STTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTG-LQASDIMWTISDTGWILNILC 264 (570)
T ss_dssp -------CSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTS-CCTTCEEEECCCTTSHHHHHH
T ss_pred -------cccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcC-CCCCceEEEcCchHHHHHHHH
Confidence 11111224567899999999999999999999999 444 33333 4455 68899999999999999994
Q ss_pred HHHhhhhcCCEEEEcC--CCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHH
Q 045351 245 CCLRSLGMGESLVCMG--KFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKY 322 (349)
Q Consensus 245 ~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~ 322 (349)
.++.++..|+++++.+ .+++..+++.|+++++|+++++|.+++.|.+. .....++++||.+++||+++++++++++
T Consensus 265 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--~~~~~~~~~lr~i~~gGe~l~~~~~~~~ 342 (570)
T 3c5e_A 265 SLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQ--DLSSYKFPHLQNCVTVGESLLPETLENW 342 (570)
T ss_dssp TTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTS--CTTTCCCTTCCEEEEESSCCCHHHHHHH
T ss_pred HHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhc--cccccccccceEEEEcCCcCCHHHHHHH
Confidence 7889999999999986 78999999999999999999999999999886 3445678999999999999999999999
Q ss_pred HHHcC--CcccccccccCc
Q 045351 323 LQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 323 ~~~~~--~~~~~~~~~~G~ 339 (349)
.+.++ ..+.|+.||.|.
T Consensus 343 ~~~~g~~i~~~YG~TE~~~ 361 (570)
T 3c5e_A 343 RAQTGLDIRESYGQTETGL 361 (570)
T ss_dssp HHHHSCCCEEEEEETTTEE
T ss_pred HHHhCCchhhccchhhccc
Confidence 99874 335566777663
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=1e-41 Score=327.40 Aligned_cols=299 Identities=14% Similarity=0.128 Sum_probs=241.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCC-CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTA-SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~-~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.|+.++|..++ ..+ |+.+++.+.. .++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||++
T Consensus 21 ~tl~~~l~~~a--~~~-p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (576)
T 3gqw_A 21 PTLVDALDYAA--LSS-AGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLS-LNLKKGDRVALIAETSSEFVEAFFACQY 96 (576)
T ss_dssp SSHHHHHHHHT--TSS-CEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHH-TCCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred CcHHHHHHHHh--hCC-CCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 68999999999 889 9988886542 24899999999999999999998 9999999999999999999999999999
Q ss_pred cCCeEecCCCCCC-------HHHHHHHHhhcCCeEEEEcCcccccccccC---cceEEeCCCCccccccccCCCCCCCCc
Q 045351 107 LGVVVSPCNPSCT-------IPEILRQIHLSKPVIAFATHDTAHKIPQLK---YGTVLLDSPEFEPLSATDSLDYYDDDE 176 (349)
Q Consensus 107 ~G~~~v~i~~~~~-------~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
+|++++|+++.++ .+++.++++.+++++++++++....+.... ......... ..... ...
T Consensus 97 ~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~ 166 (576)
T 3gqw_A 97 AGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELHVLSHA----WFKAL------PEA 166 (576)
T ss_dssp TTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCEEEEHH----HHHTS------CCC
T ss_pred hCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcceecchh----hhhcc------ccc
Confidence 9999999999998 899999999999999999887654433211 111111100 00000 011
Q ss_pred cccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc-ccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCC
Q 045351 177 ERVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV-RAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGE 254 (349)
Q Consensus 177 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~ 254 (349)
........++++++|+|||||||.||||+++|+++...+...... ++ +.+++++++.+|++|.+|+ ..++.++..|+
T Consensus 167 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~ 245 (576)
T 3gqw_A 167 DVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIK-LRPGDRCVSWLPFYHDMGLVGFLLTPVATQL 245 (576)
T ss_dssp CCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSC-CCTTCCEEECCCTTSHHHHHHHTHHHHHTTC
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccC-CCCcceEEEcCCccccccHHHHHHHHHhcCc
Confidence 112224567999999999999999999999999999988776554 55 7899999999999999999 45778899999
Q ss_pred EEEEcCC----CCHHHHHHHHHhhcccEEEechHHHHHHHhcCC--CCCCCCCcchheehccCCCCCHHHHHHHHHHcCC
Q 045351 255 SLVCMGK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGG--TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRT 328 (349)
Q Consensus 255 ~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 328 (349)
++++... +++..+++.++++++|++.++|.++..+.+... .....+++++|.+++||+++++++++++.+.++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~ 325 (576)
T 3gqw_A 246 SVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLHQFAECFRQ 325 (576)
T ss_dssp CEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGG
T ss_pred eEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCCHHHHHHHHHHHhh
Confidence 9998864 689999999999999999999999988876530 1245678999999999999999999999998842
Q ss_pred --------cccccccccCcee
Q 045351 329 --------VNRQLCLEFGAPI 341 (349)
Q Consensus 329 --------~~~~~~~~~G~~~ 341 (349)
.+.|+.+|.|..+
T Consensus 326 ~~~~~~~~~~~YG~TE~~~~~ 346 (576)
T 3gqw_A 326 VNFDNKTFMPCYGLAENALAV 346 (576)
T ss_dssp GTCCGGGEEEEEECGGGSSEE
T ss_pred cCCCcccccccCCccccccee
Confidence 2335667765433
No 29
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=6e-41 Score=347.97 Aligned_cols=288 Identities=19% Similarity=0.208 Sum_probs=242.8
Q ss_pred cchhhhhhcccCCCCCCCCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhc
Q 045351 28 TSVTSYVFSLLESHAPPPDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSL 107 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 107 (349)
.++.++|..++ .++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+|+++|+.++++++|||+++
T Consensus 464 ~~l~~~~~~~~--~~~-p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~g~~V~i~~~~s~~~vv~~lailka 537 (1304)
T 2vsq_A 464 KPLTYWFKEAV--NAN-PDAPALTYS--GQTLSYRELDEEANRIARRLQK-HGAGKGSVVALYTKRSLELVIGILGVLKA 537 (1304)
T ss_dssp CCHHHHHHHHH--HHC-TTSEEEESS--SCEEEHHHHHHHHHHHHHHHHH-TTCCTTCEEEECCCSSHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH--HhC-CCCeEEEEC--CeeEcHHHHHHHHHHHHHHHHh-cCcCCcCEEEEEeCCCHHHHHHHHHHHHH
Confidence 78999999999 999 999999987 8999999999999999999999 99999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccC--cceEEeCCCCccccccccCCCCCCCCccccccccCC
Q 045351 108 GVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLK--YGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSL 185 (349)
Q Consensus 108 G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (349)
|++++|++|..+.+++.++++++++++++++.+....+..+. ...+.++.. .... ...........+
T Consensus 538 G~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~ 606 (1304)
T 2vsq_A 538 GAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQ--TRFE---------EQASDPATAIDP 606 (1304)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCCCCSEEEESSCG--GGGG---------SCSSCCCCCCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccCCCCcEEEeccc--cccc---------cccCCCCCCCCC
Confidence 999999999999999999999999999999987655543221 122222211 0000 011111234578
Q ss_pred CCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC---CC
Q 045351 186 SDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG---KF 262 (349)
Q Consensus 186 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~---~~ 262 (349)
+++++|+|||||||.||||+++|+++.+. ......++ +.++++++...|++|+.+...++.+|+.|+++++.+ .+
T Consensus 607 ~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~-~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~ 684 (1304)
T 2vsq_A 607 NDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMA-FSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLL 684 (1304)
T ss_dssp TSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSC-CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTT
T ss_pred CCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcC-CCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcC
Confidence 99999999999999999999999999976 44555566 688999999999999999999999999999999996 36
Q ss_pred CHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcCCc---ccccccccC
Q 045351 263 DFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNRTV---NRQLCLEFG 338 (349)
Q Consensus 263 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~---~~~~~~~~G 338 (349)
++..+.+.|+++++|++.++|++++.|.+.. ...+++||.+++||+++++++.+++.+.++.. +.||.||.+
T Consensus 685 ~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~----~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 759 (1304)
T 2vsq_A 685 DTERLTDLILQENVNVMFATTALFNLLTDAG----EDWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGT 759 (1304)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC----SHHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGS
T ss_pred CHHHHHHHHHHcCCcEEEccHHHHHHHHhhc----hhcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHh
Confidence 9999999999999999999999999998763 22467899999999999999999999988643 445556654
No 30
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=3.2e-41 Score=322.89 Aligned_cols=295 Identities=15% Similarity=0.141 Sum_probs=233.0
Q ss_pred CcchhhhhhcccCCCCCCCCCeEEEeCCC--------CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHH
Q 045351 27 TTSVTSYVFSLLESHAPPPDTTALIDTAS--------RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVP 98 (349)
Q Consensus 27 ~~tl~~~l~~~~~~~~~~~~~~ai~~~~~--------~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~ 98 (349)
.+|+.++|..++ .++ |+++|+++.+. ++++||+||.++++++|+.|.+ .|+ +||+|+++++|+++++
T Consensus 19 ~~tl~~~l~~~a--~~~-p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~-~g~-~gd~V~i~~~n~~~~~ 93 (562)
T 3ite_A 19 TVPPSHYIETWA--KTH-PEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIH-ASL-HGRAIAVSLDRSLIAF 93 (562)
T ss_dssp CCCTTHHHHHHH--HHC-TTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHH-TTC-SSCEEEEECCSCHHHH
T ss_pred cCCHHHHHHHHH--HHC-CCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHh-cCC-CCCEEEEEeCCCHHHH
Confidence 389999999999 999 99999987521 2789999999999999999998 899 7999999999999999
Q ss_pred HHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCccccccccc-CcceEEeCCCCccccccccCCCCCCCCcc
Q 045351 99 VLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQL-KYGTVLLDSPEFEPLSATDSLDYYDDDEE 177 (349)
Q Consensus 99 ~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
++++||+++|++++|+++.++.+++.++++.++++++++++.....+... ...++..+...+...... ....
T Consensus 94 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 166 (562)
T 3ite_A 94 AIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVELPPETKVLDTKNQSFIENLST-------QDTS 166 (562)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCCCCTTCEEEETTCHHHHHHHHH-------SCCS
T ss_pred HHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccccCccceeecccchhhhhhccc-------cccc
Confidence 99999999999999999999999999999999999999987654433221 111221111111111111 0111
Q ss_pred ccccccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc--------ccCCCCCcEEEEecChhhHhhHHHHHhh
Q 045351 178 RVRVSVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV--------RAARSRPAVVLCTVPYFHSYGFTCCLRS 249 (349)
Q Consensus 178 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--------~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 249 (349)
.......++++++|+|||||||.||||++||+++...+...... +. +...+++++..|++|..++..++.+
T Consensus 167 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (562)
T 3ite_A 167 DILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLE-LGGVGKFLCLASRAFDVHIGEMFLA 245 (562)
T ss_dssp CCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGG-CTTTCEEECCSCTTSTHHHHHHHHH
T ss_pred ccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcc-cCcCceEEEecCchhhhhHHHHHHH
Confidence 11223456788999999999999999999999998877654332 33 5778999999999999999888999
Q ss_pred hhcCCEEEEcCCCC-HHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHcC-
Q 045351 250 LGMGESLVCMGKFD-FGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR- 327 (349)
Q Consensus 250 l~~G~~~v~~~~~~-~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~- 327 (349)
+..|+++++.+.+. +..+++.++++++|++.++|++++.+... ..++++||.+++||+++++++.+++.+.++
T Consensus 246 l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~-----~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~ 320 (562)
T 3ite_A 246 WRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV-----PEDAPHLVYLGVGGEKMTPRTQQIWSSSDRV 320 (562)
T ss_dssp HHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC-----GGGSTTCCEEEEESSCCCHHHHHHHTTCSSC
T ss_pred HhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC-----ccccCceEEEEEecCCCCHHHHHHHhhCCCc
Confidence 99999999987654 57788999999999999999998877443 356889999999999999999999988764
Q ss_pred -CcccccccccCc
Q 045351 328 -TVNRQLCLEFGA 339 (349)
Q Consensus 328 -~~~~~~~~~~G~ 339 (349)
..+.|++||.|.
T Consensus 321 ~~~~~YG~TE~~~ 333 (562)
T 3ite_A 321 ALVNVYGPTEVTI 333 (562)
T ss_dssp EEEEEECCGGGCS
T ss_pred EEEEeeccchhee
Confidence 234466677654
No 31
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=8e-41 Score=315.82 Aligned_cols=284 Identities=19% Similarity=0.202 Sum_probs=232.2
Q ss_pred cchhhhhhcccCCCCCCCC-CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 045351 28 TSVTSYVFSLLESHAPPPD-TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFS 106 (349)
Q Consensus 28 ~tl~~~l~~~~~~~~~~~~-~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 106 (349)
.|+.+.|...+ ..+ |+ ++|+++. ++++||+||.++++++|+.|.. |++|+++++|+++++++++||++
T Consensus 22 ~tl~~~l~~~a--~~~-p~d~~Al~~~--~~~~Ty~eL~~~~~~~A~~L~~------~~~V~i~~~~~~~~~~~~la~~~ 90 (505)
T 3nyq_A 22 SSLFPALSPAP--TGA-PADRPALRFG--ERSLTYAELAAAAGATAGRIGG------AGRVAVWATPAMETGVAVVAALL 90 (505)
T ss_dssp --CCTTTSSCC--CSG-GGGSEEEEET--TEEEEHHHHHHHHHHHHTTCC---------CEEEECCSSHHHHHHHHHHHH
T ss_pred chhHHHHHHHH--HhC-CCCCeEEEEC--CeeeeHHHHHHHHHHHHhhccC------CCEEEEEcCCCHHHHHHHHHHHH
Confidence 68999999999 888 65 9999997 8999999999999999987753 78999999999999999999999
Q ss_pred cCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcccccccccCcceEEeCCCCccccccccCCCCCCCCccccccccCCC
Q 045351 107 LGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDTAHKIPQLKYGTVLLDSPEFEPLSATDSLDYYDDDEERVRVSVSLS 186 (349)
Q Consensus 107 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
+|++++|+++..+.+++.++++.+++++++++..............+.++.. ...........++
T Consensus 91 ~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 155 (505)
T 3nyq_A 91 AGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPALGALERVDVDVR---------------ARGAVPEDGADDG 155 (505)
T ss_dssp HTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCCGGGTTSEEEECCTT---------------CCCCCCCCCCCTT
T ss_pred hCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccchhhccccccccccc---------------cccCCCCCCCCCC
Confidence 9999999999999999999999999999999865211100011111111110 0111112345678
Q ss_pred CcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEEEcCCCCHH
Q 045351 187 DPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLVCMGKFDFG 265 (349)
Q Consensus 187 ~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~ 265 (349)
++++|+|||||||.||||++||+++...+......++ +.+++++++.+|++|.+|+ ..++.++..|+++++.+++++.
T Consensus 156 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~ 234 (505)
T 3nyq_A 156 DPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQ-WTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTE 234 (505)
T ss_dssp SEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHT-CCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSCCHH
T ss_pred CeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhC-CCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCCChH
Confidence 9999999999999999999999999999998888887 7899999999999999998 5788999999999999999999
Q ss_pred HHHHHHHhhcccEEEechHHHHHHHhcCC--CCCCCCCcchheehccCCCCCHHHHHHHHHHcC--CcccccccccCc
Q 045351 266 RMLKAVEEFRVSHVVLAPPVVLKMARDGG--TMDGYDLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQLCLEFGA 339 (349)
Q Consensus 266 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~--~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~~~~~G~ 339 (349)
.+++.+ ++++|+++++|+++..|.+... .....+++++|.+++||+++++++.+++.+.++ ..+.|+.||.+.
T Consensus 235 ~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~ 311 (505)
T 3nyq_A 235 GAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLM 311 (505)
T ss_dssp HHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEE
T ss_pred HHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhccc
Confidence 999999 8899999999999999987430 112345778999999999999999999999874 345566677654
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.92 E-value=1.4e-25 Score=202.23 Aligned_cols=153 Identities=16% Similarity=0.125 Sum_probs=132.5
Q ss_pred CCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcCCCCH
Q 045351 185 LSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMGKFDF 264 (349)
Q Consensus 185 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~ 264 (349)
.|++++|+|||||||.||||++||+++.+.+......++ +.++|++++.+|++|++|+..++.+++.|+++++.++.
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~-- 112 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALS-LGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPT-- 112 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTT-CCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCC--
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhC-CCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcc--
Confidence 478999999999999999999999999999998888888 79999999999999999998899999999999998642
Q ss_pred HHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCCCHHHHHHHHHHc-CCcccccccccCceee
Q 045351 265 GRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHLTLSVIRKYLQLN-RTVNRQLCLEFGAPII 342 (349)
Q Consensus 265 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~~~~~G~~~i 342 (349)
...++.|+++++|++.++|.+++.|++.. ....++++||.+++||+++++++.+++.+.. +..+.|++||.|..+.
T Consensus 113 ~~~~~~i~~~~~t~~~~~P~~l~~ll~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~YG~TEt~~~~~ 189 (358)
T 4gs5_A 113 ANPLAGLDHADFDFVAMVPMQLQSILENS--ATSGQVDRLGKVLLGGAPVNHALAMQISDLAMPVYQSYGMTETVSHVA 189 (358)
T ss_dssp SCTTTTCSSCCCSEEEECHHHHHHHHHCT--TTGGGGGGGCSEEECSSCCCHHHHHHHHTCSSCEEEEEECGGGSSEEE
T ss_pred ccHHHHHHHhCCeEEEcChHHHHHhhccc--cccccCCcceEEEEcccCCCchheecccccCceEEeccccccccceee
Confidence 23467789999999999999999999874 3456789999999999999999999998742 4455677788765433
No 33
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.88 E-value=7.8e-23 Score=185.35 Aligned_cols=155 Identities=17% Similarity=0.152 Sum_probs=128.1
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhh---hccccCCCCCcEEEEecCh-hhHhhHHHHHhhhhcCCEEE
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGG---HAVRAARSRPAVVLCTVPY-FHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~~~~~l~~~p~-~~~~g~~~~~~~l~~G~~~v 257 (349)
...++++++|+|||||||.||+|.++|+++.....+. ....+ +.+++++++..|+ +|..|+...+.++..|+ ++
T Consensus 87 ~~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~-~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v 164 (369)
T 3hgu_A 87 GLPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRP-GRPSGNTLAAIPTGPHIVGAINKERALRLGG-MF 164 (369)
T ss_dssp TSCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTST-TCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CE
T ss_pred cCCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhC-CCCcceEEEecCCCchhhhHHHHHHHHHcCC-EE
Confidence 3467899999999999999999999999999988743 34444 6889999999999 99999987778899999 77
Q ss_pred EcCCCCHH-----------------------HHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCCCcchheehccCCCC
Q 045351 258 CMGKFDFG-----------------------RMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYDLSSIEVVASGGAHL 314 (349)
Q Consensus 258 ~~~~~~~~-----------------------~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~l~~lr~i~~gG~~l 314 (349)
++..+++. .+++.|+++++|++.++|+++..|++.. .....++++||.+++||+++
T Consensus 165 ~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~-~~~~~~~~~lr~i~~gGe~l 243 (369)
T 3hgu_A 165 FSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRP-EVVLQMKQSLAQITLGGTEL 243 (369)
T ss_dssp ECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCH-HHHHHHHHHCSEEEEESSCC
T ss_pred ECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhh-hhhccccCCeeEEEECCccC
Confidence 77778888 8888999999999999999999998774 33445678999999999999
Q ss_pred CHHHHHHHH-HHcCCc---ccccccccCc
Q 045351 315 TLSVIRKYL-QLNRTV---NRQLCLEFGA 339 (349)
Q Consensus 315 ~~~~~~~~~-~~~~~~---~~~~~~~~G~ 339 (349)
++++.+++. +.||+. +.|+++|.|+
T Consensus 244 ~~~~~~~~~~~~~p~~~v~~~YG~TE~~~ 272 (369)
T 3hgu_A 244 NLDEIKFIASEILPDCEFSASYGSTSALG 272 (369)
T ss_dssp CHHHHHHHHHHTCTTSEEEEEEEEGGGTE
T ss_pred CHHHHHHHHHHhCCCcEEEcccCchhhhc
Confidence 999999999 898643 3355666553
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.87 E-value=4.2e-22 Score=184.58 Aligned_cols=157 Identities=19% Similarity=0.160 Sum_probs=130.9
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhh---ccccCCCCCcEEEEecCh-hhHhhHHHHHhhhhcCCEEE
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGH---AVRAARSRPAVVLCTVPY-FHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~---~~~~~~~~~~~~l~~~p~-~~~~g~~~~~~~l~~G~~~v 257 (349)
...++++++++|||||||.||+|++||+++........ ..++ +.+++++++..|+ +|..++...+.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAG-ARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTT-CCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcC-CCCCCEEEEcccccccccchHHHHHHHHcCCEEE
Confidence 34568899999999999999999999999987665433 2345 6889999999998 78888877889999999999
Q ss_pred EcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCCC--CcchheehccCCCCCHHHHHHHHHHcC--Cccccc
Q 045351 258 CMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGYD--LSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQL 333 (349)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~--l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~ 333 (349)
+.+.+++..+++.|+++++|++.++|+++..|++.. .....+ ++++|.+++||+++++++.+++.+.++ ..+.|+
T Consensus 165 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~-~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG 243 (437)
T 2y27_A 165 PFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEI-ERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYG 243 (437)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHH-HHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEE
T ss_pred eCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHH-HHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCC
Confidence 998889999999999999999999999999998764 322232 578999999999999999999999874 234466
Q ss_pred ccccCce
Q 045351 334 CLEFGAP 340 (349)
Q Consensus 334 ~~~~G~~ 340 (349)
++|.+++
T Consensus 244 ~TE~~g~ 250 (437)
T 2y27_A 244 LSEVMGP 250 (437)
T ss_dssp ETTTTEE
T ss_pred chhhcCC
Confidence 7776433
No 35
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.87 E-value=2.1e-22 Score=186.56 Aligned_cols=156 Identities=18% Similarity=0.115 Sum_probs=129.9
Q ss_pred cCC-CCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc---cccCCCCCcEEEEecChhhHhhH-HHHHhhhhcCCEEE
Q 045351 183 VSL-SDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA---VRAARSRPAVVLCTVPYFHSYGF-TCCLRSLGMGESLV 257 (349)
Q Consensus 183 ~~~-~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~v 257 (349)
..+ +++++++|||||||.||+|++||+++......... .++ +.+++++++..|+.|..+. ..++.++..|++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVG-IRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTT-CCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcC-CCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 344 78999999999999999999999999877665432 335 6889999999998655554 67788999999999
Q ss_pred EcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCC--CCcchheehccCCCCCHHHHHHHHHHcC--Cccccc
Q 045351 258 CMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGY--DLSSIEVVASGGAHLTLSVIRKYLQLNR--TVNRQL 333 (349)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--~l~~lr~i~~gG~~l~~~~~~~~~~~~~--~~~~~~ 333 (349)
+.+.+++..+++.|+++++|++.++|+++..|++.. ..... ++++||.+++||+++++++.+++.+.|+ ..+.|+
T Consensus 161 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG 239 (436)
T 3qov_A 161 PAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVF-QEEGIDPRETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFG 239 (436)
T ss_dssp CCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHH-HHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEE
T ss_pred eCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHH-HHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCc
Confidence 998899999999999999999999999999998864 33333 3789999999999999999999999974 334566
Q ss_pred ccccCce
Q 045351 334 CLEFGAP 340 (349)
Q Consensus 334 ~~~~G~~ 340 (349)
+||.++.
T Consensus 240 ~TE~~~~ 246 (436)
T 3qov_A 240 MTEMNGP 246 (436)
T ss_dssp EGGGTEE
T ss_pred chhhcCC
Confidence 7777443
No 36
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.87 E-value=6.4e-22 Score=183.70 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=130.8
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc---cccCCCCCcEEEEecCh-hhHhhHHHHHhhhhcCCEEE
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA---VRAARSRPAVVLCTVPY-FHSYGFTCCLRSLGMGESLV 257 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~l~~~p~-~~~~g~~~~~~~l~~G~~~v 257 (349)
...++++++++|||||||.||+|++||+++......... .++ +.+++++++..|+ +|..++...+.++..|++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~ 166 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAG-GRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVV 166 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTT-CCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcC-CCCCCEEEEeccCcccccHHHHHHHHHHcCCEEE
Confidence 345688999999999999999999999999876554332 455 6889999999998 67888877889999999999
Q ss_pred EcCCCCHHHHHHHHHhhcccEEEechHHHHHHHhcCCCCCCC--CCcchheehccCCCCCHHHHHHHHHHcCC--ccccc
Q 045351 258 CMGKFDFGRMLKAVEEFRVSHVVLAPPVVLKMARDGGTMDGY--DLSSIEVVASGGAHLTLSVIRKYLQLNRT--VNRQL 333 (349)
Q Consensus 258 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~--~l~~lr~i~~gG~~l~~~~~~~~~~~~~~--~~~~~ 333 (349)
+.+.+++..+++.|+++++|++.++|+++..|++.. ..... .++++|.+++||+++++++.+++.+.++. .+.|+
T Consensus 167 ~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~-~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG 245 (443)
T 2y4o_A 167 PMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEM-VRQGMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYG 245 (443)
T ss_dssp CCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHH-HHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHH-HHcCCCcccCCceEEEECCCcCCHHHHHHHHHHhCcCEEeccC
Confidence 998889999999999999999999999999998764 32233 35799999999999999999999998842 34466
Q ss_pred ccccCce
Q 045351 334 CLEFGAP 340 (349)
Q Consensus 334 ~~~~G~~ 340 (349)
+||.+++
T Consensus 246 ~TE~~g~ 252 (443)
T 2y4o_A 246 LSEVMGP 252 (443)
T ss_dssp ETTTTEE
T ss_pred chhhcCC
Confidence 7776433
No 37
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=93.78 E-value=0.49 Score=42.83 Aligned_cols=95 Identities=14% Similarity=0.049 Sum_probs=73.2
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.++.+.. .+| -.+|...+...+..+++.+.. .|+.++|++....+.+ ...+...++++..|+.+++.+
T Consensus 89 ~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 167 (437)
T 2y27_A 89 QDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRA-AGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFG 167 (437)
T ss_dssp GGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHH-TTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCC
T ss_pred hhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHH-cCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCC
Confidence 566665532 223 368999998888888888887 8999999999988853 333456788899999999876
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
. .+.+.+...+++.++.+++.....
T Consensus 168 ~-~~~~~~~~~i~~~~~t~l~~~Ps~ 192 (437)
T 2y27_A 168 G-GQTEKQVQLIQDFRPDIIMVTPSY 192 (437)
T ss_dssp S-CCHHHHHHHHHHHCCSEEEECHHH
T ss_pred C-CCHHHHHHHHHHhCCCEEEECHHH
Confidence 5 478888999999999999876543
No 38
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=93.09 E-value=0.58 Score=42.44 Aligned_cols=95 Identities=13% Similarity=0.024 Sum_probs=73.1
Q ss_pred CCCeEEEe---CCCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALID---TASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~---~~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~ 115 (349)
++.++.+. +.+| -.+|...+...+..+++.+.. .|+.++|++....+-+ ...+...++++..|+.+++.+
T Consensus 91 ~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 169 (443)
T 2y4o_A 91 REQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRA-AGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMS 169 (443)
T ss_dssp GGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHH-TTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCC
T ss_pred hhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHH-cCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECC
Confidence 56666443 2233 368999998888888888887 8999999999988864 333556788889999999886
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
.. ..+.+...+++.++.+++.....
T Consensus 170 ~~-~~~~~~~~i~~~~~t~l~~~Ps~ 194 (443)
T 2y4o_A 170 GG-QTEKQVQLIRDFEPKIILVTPSY 194 (443)
T ss_dssp SC-CHHHHHHHHHHHCCSEEEECHHH
T ss_pred CC-CHHHHHHHHHHhCCcEEEECHHH
Confidence 54 78888899999999998876543
No 39
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=91.90 E-value=0.97 Score=40.85 Aligned_cols=94 Identities=16% Similarity=0.012 Sum_probs=73.6
Q ss_pred CCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCC--chHHHHHHHHHhcCCeEecCCC
Q 045351 46 DTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNS--VRVPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 46 ~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~i~~ 116 (349)
+.+|.+... +| -.+|.+.+...+..+++.+.. .++.++|++....+-+ ...+..+++++..|+.+++.+.
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 164 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYM-VGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA 164 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHH-TTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHH-cCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC
Confidence 677765432 22 468999999988888888887 8999999999998753 3345567888999999998765
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
. ..+.+...+++.++.+++.....
T Consensus 165 ~-~~~~~~~~i~~~~~t~~~~~P~~ 188 (436)
T 3qov_A 165 G-NSKRQIKFISDFKTTALHAIPSY 188 (436)
T ss_dssp C-CHHHHHHHHHHHTCCEEECCHHH
T ss_pred C-CHHHHHHHHHHHCCCEEEECHHH
Confidence 4 67888899999999998877653
No 40
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=85.12 E-value=3.4 Score=36.21 Aligned_cols=84 Identities=5% Similarity=-0.147 Sum_probs=61.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCCCCCCHH-------------
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCNPSCTIP------------- 121 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~~~~------------- 121 (349)
..+|.+.+...+...++.+.. .|+.++|+++...+-+. ..+...++++..|+.+++.+ ..+.
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~ 185 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQH-RPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTAT 185 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTT-STTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHH
T ss_pred EEECHHHHHHHHHHHHhhHHh-hCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhh
Confidence 467888888888877777887 89999999999988632 33444556688999666653 3344
Q ss_pred ----------HHHHHHhhcCCeEEEEcCcccc
Q 045351 122 ----------EILRQIHLSKPVIAFATHDTAH 143 (349)
Q Consensus 122 ----------~l~~~l~~~~~~~i~~~~~~~~ 143 (349)
++...+++.++.+++.......
T Consensus 186 ~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~ 217 (369)
T 3hgu_A 186 VRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLR 217 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHSCEEEEEECHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHH
Confidence 6666889999999888765443
No 41
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=82.31 E-value=8.8 Score=35.71 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=69.4
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH--HHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV--LYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~--~~lA~~~~G~~~v~i~ 115 (349)
++.+|++....| -.+|.+.+...+......+.. .++.++|+++...|-...+-. .+++.+ .|+..+..+
T Consensus 191 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~ 268 (548)
T 2d1s_A 191 KEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYG-NQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT 268 (548)
T ss_dssp TTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTS-CCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhc-cCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC
Confidence 377787754222 468999988776666555444 688999999988886654432 356777 999888775
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
...++.+...+++.++.+++......
T Consensus 269 -~~~~~~~~~~i~~~~~t~~~~~P~~~ 294 (548)
T 2d1s_A 269 -KFDEETFLKTLQDYKCTSVILVPTLF 294 (548)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEECHHHH
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHH
Confidence 56788999999999999998875443
No 42
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.02 E-value=18 Score=32.99 Aligned_cols=94 Identities=12% Similarity=-0.034 Sum_probs=68.9
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++....| -.+|.+.+...+.... .. .++.++|+++...|-...+ +..+++++..|+..+..+
T Consensus 162 ~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~---~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 236 (501)
T 3ipl_A 162 LDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCK---ES-LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD- 236 (501)
T ss_dssp TTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHH---HH-TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHH---Hh-hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-
Confidence 678887653222 4689888877665544 33 6789999999988865432 344677888999988775
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCcccc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDTAH 143 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~~~ 143 (349)
..+++.+...+++.++..+........
T Consensus 237 ~~~~~~~~~~i~~~~~t~~~~~P~~~~ 263 (501)
T 3ipl_A 237 KFNAEQILTMIKNERITHISLVPQTLN 263 (501)
T ss_dssp SCCHHHHHHHHHHSCCCEEEECHHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEchHHHHH
Confidence 467889999999999999988765443
No 43
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=76.01 E-value=14 Score=34.32 Aligned_cols=95 Identities=14% Similarity=-0.008 Sum_probs=68.3
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++....| -.+|.+.+...+......+.. .++.++|+++...|-...+ +...++.+..|+..+..+
T Consensus 189 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 266 (550)
T 3rix_A 189 DKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFG-NQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY- 266 (550)
T ss_dssp TTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTS-CCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhcc-ccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-
Confidence 466776643222 468998887776655554444 6789999999988865433 445677788999888775
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
...++.+...+++.++..++.....
T Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~~ 291 (550)
T 3rix_A 267 RFEEELFLRSLQDYKIQSALLVPTL 291 (550)
T ss_dssp SCCHHHHHHHHHHTTCSEEEECHHH
T ss_pred CCCHHHHHHHHHHcCCeEEEeCcHH
Confidence 5678889999999999998887543
No 44
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=76.00 E-value=29 Score=32.03 Aligned_cols=92 Identities=11% Similarity=-0.001 Sum_probs=68.0
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH---HHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV---LYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~i 114 (349)
++.+|++....| -.+|.+.+...+...+. . .++.++|+++...|-...+-. .+++++..|+..+..
T Consensus 190 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 190 ADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAE---I-CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp TTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHH---H-TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred ccceEEEEECCCcccCCceEEechHHHHHHHHHHHH---H-hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 677887743222 46899888777655543 3 678999999999886665544 368888899988877
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 115 NPSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 115 ~~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
+ ...+..+...+++.++..+......
T Consensus 266 ~-~~~~~~~~~~i~~~~~t~~~~~P~~ 291 (544)
T 3o83_A 266 P-NPEPLNCFSIIQRHQVNMASLVPSA 291 (544)
T ss_dssp S-SCCHHHHHHHHHHHTCCEEEECHHH
T ss_pred C-CCCHHHHHHHHHHHCCCEEEechHH
Confidence 5 4577888889999999998876543
No 45
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=75.73 E-value=31 Score=31.87 Aligned_cols=92 Identities=14% Similarity=0.043 Sum_probs=67.6
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH---HHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV---LYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~i 114 (349)
++.+|++....| -.+|.+.+...+.... .. .++.++|+++...|-...+-. .+++++..|+..+..
T Consensus 181 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 181 SSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSV---EV-CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHH---HH-HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred cCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHH---Hh-hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 677777643222 4789988877665443 33 678999999998886654433 478888999998876
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 115 NPSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 115 ~~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
+ ...++.+...+++.++.+++.....
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~ 282 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPL 282 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHH
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHH
Confidence 5 4678889999999999998876543
No 46
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=74.64 E-value=28 Score=32.21 Aligned_cols=106 Identities=7% Similarity=-0.050 Sum_probs=76.3
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.+|++....+..+. ....+|.+.+...+..+...+ + +.+++++...++-+..+ +..+++++..|+..+.+
T Consensus 31 ~~p~~~A~~~~~~~~~~~-~~~~~Ty~el~~~~~~lA~~L~~~G-v~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl 107 (549)
T 3g7s_A 31 KFGEKTAIISAEPKFPSE-FPESMNFLEICEVTKKLASGISRKG-VRKGEHVGVCIPNSIDY-VMTIYALWRVAATPVPI 107 (549)
T ss_dssp HHTTSEEEEEESSCCCCS-SCSEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEC
T ss_pred hCCCceEEEeCCCccccc-ccceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEEcc
Confidence 456777776553221111 124689998887766654433 4 68899999999865433 45778999999999988
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHHHh
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMAR 291 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 291 (349)
+ .+..+.+...++..+++.++..+.....+..
T Consensus 108 ~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~ 140 (549)
T 3g7s_A 108 NPMYKSFELEHILNDSEATTLVVHSMLYENFKP 140 (549)
T ss_dssp CTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 5 5688999999999999999998877665543
No 47
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=74.30 E-value=20 Score=32.73 Aligned_cols=96 Identities=13% Similarity=0.005 Sum_probs=73.2
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..|+.+|++. .+..+|.+.+...+..+...+ + +.+++++...++-+..+ +..+++++..|+..+..
T Consensus 18 ~~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~G-v~~gd~V~i~~~~~~~~-~~~~lA~~~~Ga~~vpl 86 (509)
T 3ivr_A 18 LFPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDG-VHTGDRVAILSQNCSEM-IELIGAVALIGAILLPV 86 (509)
T ss_dssp HSTTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSCHHH-HHHHHHHHHTTCEEEEC
T ss_pred HCCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEec
Confidence 4567777764 125789999988776655443 4 67899999998865433 45778899999999988
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
+ .+..+.+...++..++..++..+.....+
T Consensus 87 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 117 (509)
T 3ivr_A 87 NYRLNADEIAFVLGDGAPSVVVAGTDYRDIV 117 (509)
T ss_dssp CTTSCHHHHHHHHHHHCEEEEEECSTTHHHH
T ss_pred CCCCCHHHHHHHHHhcCceEEEECcchhhhH
Confidence 5 56889999999999999999888766553
No 48
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=72.94 E-value=20 Score=33.08 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=72.1
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++... +| ..+|.+.+...+..+...+ + +.+++++...++-+..+ +...++++..|+..+..
T Consensus 34 ~~p~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~G-v~~gd~V~i~~~~~~~~-~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 34 NHSSKPCLINGA---NG----DVYTYADVELTARRVASGLNKIG-IQQGDVIMLFLPSSPEF-VLAFLGASHRGAIITAA 104 (536)
T ss_dssp GSTTSEEEEETT---TC----CEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSSHHH-HHHHHHHHHHTCEEEEC
T ss_pred cCCCceEEEECC---CC----CEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHH-HHHHHHHHHhCCEEecc
Confidence 456777765422 22 4689999887766654433 4 68899999999875433 46778899999999888
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
+ .+.++.+...++..++..++..+.....+
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 135 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEKV 135 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHHH
Confidence 5 56889999999999999999887655443
No 49
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=72.48 E-value=35 Score=31.45 Aligned_cols=101 Identities=8% Similarity=-0.033 Sum_probs=73.8
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.++++....+ ....+|.+.+...+..+... .+ +.+++++...++-+..+ +...++++..|+..+..
T Consensus 30 ~~p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~vpl 102 (541)
T 1v25_A 30 LFGRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRALG-VGVGDRVATLGFNHFRH-LEAYFAVPGMGAVLHTA 102 (541)
T ss_dssp HSTTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEC
T ss_pred hCCCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEEec
Confidence 35667776543211 24578999988776665443 34 68899999998865433 45778899999999988
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
+ .+..+.+...++..++..++..+.....+.
T Consensus 103 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 134 (541)
T 1v25_A 103 NPRLSPKEIAYILNHAEDKVLLFDPNLLPLVE 134 (541)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGHHHHH
T ss_pred CcccCHHHHHHHHHhCCCcEEEEChhHHHHHH
Confidence 5 568899999999999999999887665543
No 50
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=72.11 E-value=33 Score=27.43 Aligned_cols=90 Identities=13% Similarity=0.140 Sum_probs=54.4
Q ss_pred cEEEEecCh-hhHhhHH-HHHhhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEe------chHH--HHHHHhcCCCCC
Q 045351 229 AVVLCTVPY-FHSYGFT-CCLRSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVL------APPV--VLKMARDGGTMD 297 (349)
Q Consensus 229 ~~~l~~~p~-~~~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~------~P~~--l~~l~~~~~~~~ 297 (349)
.+++.+.+- .|..|.. ....--..|..++... ...++.+.+.+.+++++.+.+ ++.+ +..+++.. ...
T Consensus 94 ~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l-~~~ 172 (215)
T 3ezx_A 94 LAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRL-NEE 172 (215)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHH-HHT
T ss_pred eEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHH-HHc
Confidence 344444443 6888884 3344555677777764 568999999999999998777 2222 33333322 111
Q ss_pred CCCCcchheehccCCCCCHHHHHH
Q 045351 298 GYDLSSIEVVASGGAHLTLSVIRK 321 (349)
Q Consensus 298 ~~~l~~lr~i~~gG~~l~~~~~~~ 321 (349)
... +.++ +++||.+++++..++
T Consensus 173 ~~~-~~v~-v~vGG~~~~~~~a~~ 194 (215)
T 3ezx_A 173 KLR-DSVK-CMFGGAPVSDKWIEE 194 (215)
T ss_dssp TCG-GGSE-EEEESSSCCHHHHHH
T ss_pred CCC-CCCE-EEEECCCCCHHHHHH
Confidence 110 1333 678999999775543
No 51
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=71.78 E-value=38 Score=31.05 Aligned_cols=92 Identities=13% Similarity=-0.002 Sum_probs=64.9
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHH--HHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVL--YLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~--~lA~~~~G~~~v~i~ 115 (349)
++.+|++... +| -.+|.+.+...+..++. . .++.++|+++...|-...+-.. +++++ .|+..+..+
T Consensus 169 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~ 243 (517)
T 3r44_A 169 GDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWAS---T-IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMP 243 (517)
T ss_dssp TTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHH---H-SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECS
T ss_pred CCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHH---h-cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeC
Confidence 5777776432 22 46899888777655443 3 5789999999998876554433 44555 888888774
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
....+.+...+++.++.++.......
T Consensus 244 -~~~~~~~~~~i~~~~~t~~~~~P~~~ 269 (517)
T 3r44_A 244 -QFDATKVWSLIVEERVCIGGAVPAIL 269 (517)
T ss_dssp -SCCHHHHHHHHHHTTCCEEEECHHHH
T ss_pred -CCCHHHHHHHHHHhCCeEEEeHHHHH
Confidence 57888899999999999988776543
No 52
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=68.55 E-value=24 Score=32.33 Aligned_cols=93 Identities=10% Similarity=-0.017 Sum_probs=66.5
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++.. .+| -.+|.+.+...+..++. . .++.++|+++...|-+..+ +..+++++..|+..+..+.
T Consensus 142 ~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 217 (511)
T 3e7w_A 142 EHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICA---D-FPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTK 217 (511)
T ss_dssp TTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHH---H-STTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCH
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-cCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcCh
Confidence 567776642 223 46888888766554433 3 6789999999998866443 4457888999999887754
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 S--CTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~--~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
. ..++.+...+++.++.+++.....
T Consensus 218 ~~~~~~~~~~~~i~~~~~t~~~~~P~~ 244 (511)
T 3e7w_A 218 DAVNKPKVLFEELKKSGLNVWTSTPSF 244 (511)
T ss_dssp HHHHSHHHHHHHHHHHCCSEEEECHHH
T ss_pred hhhcCHHHHHHHHHHcCCcEEEecHHH
Confidence 3 467788888999999988876543
No 53
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=68.52 E-value=22 Score=32.53 Aligned_cols=94 Identities=14% Similarity=0.047 Sum_probs=66.8
Q ss_pred CCCeEEEeCC---CC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTA---SR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~---~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++... +| -.+|.+.+...+.... .. .++.++|+++...|-+..+ +..+++++..|+..+.++.
T Consensus 143 ~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 218 (512)
T 3fce_A 143 GDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAV---ED-FNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDK 218 (512)
T ss_dssp TTSEEEEEEECC----CEEEEEEHHHHHHHHHHHH---HH-TTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCH
T ss_pred CCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHH---Hh-cCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCH
Confidence 5677776432 22 4689888876654443 33 6789999999998865433 4557888899999888765
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 S--CTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 ~--~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
. ..++.+...+++.++.+++......
T Consensus 219 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 246 (512)
T 3fce_A 219 DMIARPKDLFASLEQSDIQVWTSTPSFA 246 (512)
T ss_dssp HHHHSHHHHHHHHHHHCCCEEEECHHHH
T ss_pred HHhhCHHHHHHHHHHcCCcEEEecHHHH
Confidence 3 4677888899999999988765433
No 54
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=68.49 E-value=35 Score=30.66 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=76.6
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcccc--CCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVRA--ARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
...|+.+|++.........-....+|.+.+...+..+...+. .. +++++...++-...+ +...++++..|+..+.+
T Consensus 35 ~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 35 RLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEY-VVAFLGALQAGRIAVPL 112 (480)
T ss_dssp HHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEE
T ss_pred HhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHH-HHHHHHHHHhCcEEEee
Confidence 345778887665422111113467899999887776555443 13 788998888865433 45778999999999888
Q ss_pred CC----CCHHHHHHHHHhhcccEEEechHHHHHHHhc
Q 045351 260 GK----FDFGRMLKAVEEFRVSHVVLAPPVVLKMARD 292 (349)
Q Consensus 260 ~~----~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 292 (349)
.. ...+++...++..++..++..+.....+...
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~ 149 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQH 149 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHT
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHH
Confidence 53 4568888999999999999988777666543
No 55
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=67.75 E-value=36 Score=32.42 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=71.5
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhc----cccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHA----VRAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
..++.+|++.... .+| ....+|.+.+...+..+.. ..+ +.++|++...+|..-.+ +..+++++..|+..+.
T Consensus 94 ~~pd~~Al~~~~~-~~~--~~~~~TY~eL~~~v~~lA~~L~~~~G-v~~Gd~V~i~~~~~~e~-v~a~lA~~~~Gav~vp 168 (663)
T 1ry2_A 94 KTPNKKAIIFEGD-EPG--QGYSITYKELLEEVCQVAQVLTYSMG-VRKGDTVAVYMPMVPEA-IITLLAISRIGAIHSV 168 (663)
T ss_dssp TCTTSEEEEEECS-STT--CCEEEEHHHHHHHHHHHHHHHHHTSC-CCTTCEEEECCCSSHHH-HHHHHHHHHTTCEEEE
T ss_pred cCCCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEe
Confidence 3567777765432 122 2356899998877666443 344 68999999999976443 4577899999999888
Q ss_pred cC-CCCHHHHHHHHHhhcccEEEechH
Q 045351 259 MG-KFDFGRMLKAVEEFRVSHVVLAPP 284 (349)
Q Consensus 259 ~~-~~~~~~~~~~i~~~~~t~l~~~P~ 284 (349)
.. .+.+..+...++..++..++....
T Consensus 169 l~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 169 VFAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred eCCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 84 678999999999999999988654
No 56
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=67.16 E-value=49 Score=30.10 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=66.9
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCC--CCCCEEEEEcCCCchHH--HHHHHHHhcCCeEec
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKL--SKYDVAFLLSQNSVRVP--VLYLSLFSLGVVVSP 113 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~--~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 113 (349)
++.+|++....| -.+|.+.+...+..++. . .++ .++|+++..+|-...+- ..+++.+..|+..+.
T Consensus 152 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 227 (504)
T 1t5h_X 152 PAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMST---Q-VGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVV 227 (504)
T ss_dssp TTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHH---T-TCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEE
T ss_pred CCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHH---h-hCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEe
Confidence 677777643222 46899988776655433 3 566 78899988888665543 347888899999887
Q ss_pred CCCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 114 CNPSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 114 i~~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
.+. ..++.+...+++.++.+++.....
T Consensus 228 ~~~-~~~~~~~~~i~~~~~t~~~~~P~~ 254 (504)
T 1t5h_X 228 VEE-FRPVDALQLVQQEQVTSLFATPTH 254 (504)
T ss_dssp CSS-CCHHHHHHHHHHHTCCEEECCHHH
T ss_pred CCC-CCHHHHHHHHHHhCCeEEEeChHH
Confidence 764 678888899999999998876543
No 57
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=67.13 E-value=38 Score=31.51 Aligned_cols=94 Identities=11% Similarity=-0.017 Sum_probs=65.0
Q ss_pred CCCeEEEeCCC---C----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH--HHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTAS---R----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV--LYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~---~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~--~~lA~~~~G~~~v~i~ 115 (349)
++.+|++.... | -.+|.+ +..... +..... .++.++|++....+-+..+-. .+++.+..|+..+...
T Consensus 205 ~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~--~~~~~~-~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 280 (570)
T 3c5e_A 205 SQEASAIYFTSGTSGLPKMAEHSYS-SLGLKA--KMDAGW-TGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHL 280 (570)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHH-HHHHHH--HHHTTT-TSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEEC
T ss_pred CCCcEEEEECCCCCCCCCEEEechH-HHHhhh--hhhhhh-cCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEec
Confidence 67777764322 2 467887 433211 122244 789999999998887655433 4678888998887765
Q ss_pred C-CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 116 P-SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 116 ~-~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
. ...++.+...+++.++.+++......
T Consensus 281 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 308 (570)
T 3c5e_A 281 LPKFDPLVILKTLSSYPIKSMMGAPIVY 308 (570)
T ss_dssp CSSCCHHHHHHHHHHSCCCEEEECHHHH
T ss_pred CCCCCHHHHHHHHHHhCCeEEeccHHHH
Confidence 3 67888999999999999998875433
No 58
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=66.34 E-value=22 Score=33.14 Aligned_cols=91 Identities=12% Similarity=0.113 Sum_probs=66.8
Q ss_pred CCCeEEEeCCC---C----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH--HHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTAS---R----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV--LYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~---~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~--~~lA~~~~G~~~v~i~ 115 (349)
++.+|++.... | -.+|.+.+...+...+. . .++.++|+++...|-...+-. .+++.+..|++.+..+
T Consensus 166 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 241 (590)
T 3kxw_A 166 SNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFT---S-FHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMS 241 (590)
T ss_dssp TTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHH---H-TTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECC
T ss_pred CCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHH---h-hCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeC
Confidence 67788765322 2 46899988877665543 3 678999999999987765543 3788889999988876
Q ss_pred CCC---CHHHHHHHHhhcCCeEEEEcC
Q 045351 116 PSC---TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 116 ~~~---~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+.. .+..+...+++.++.++....
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~p 268 (590)
T 3kxw_A 242 PFSFLQNPLSWLKHITKYKATISGSPN 268 (590)
T ss_dssp HHHHHHCTHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHCHHHHHHHHHHhCCeeecCCh
Confidence 532 567778888888998887654
No 59
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=65.30 E-value=1.6 Score=41.14 Aligned_cols=31 Identities=32% Similarity=0.212 Sum_probs=26.5
Q ss_pred cCCCCcEEEEeccCCC-CCCceeeechhhHHH
Q 045351 183 VSLSDPAAILYSSGTT-GMVKGALLTQRNLVA 213 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 213 (349)
..++.+.++..||||| |.||.|.+|.+.+-.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 3567778999999999 789999999998755
No 60
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=64.21 E-value=48 Score=30.79 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=71.0
Q ss_pred cCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEc
Q 045351 183 VSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCM 259 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~ 259 (349)
..++.+|++. . ...+|.+.+...+..+... .+ +.+++++...++-+..+ +...++++..|+..+..
T Consensus 51 ~~p~~~Al~~-~--------~~~~Ty~eL~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~vpl 119 (563)
T 1amu_A 51 KRPNNVAIVC-E--------NEQLTYHELNVKANQLARIFIEKG-IGKDTLVGIMMEKSIDL-FIGILAVLKAGGAYVPI 119 (563)
T ss_dssp HCTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEC
T ss_pred HCCCCeEEEe-C--------CceecHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEEe
Confidence 4567777653 1 2368999888766665443 34 68899999988865433 45778899999999988
Q ss_pred C-CCCHHHHHHHHHhhcccEEEechHHHHHH
Q 045351 260 G-KFDFGRMLKAVEEFRVSHVVLAPPVVLKM 289 (349)
Q Consensus 260 ~-~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 289 (349)
+ .+..+.+...++..++..++..+.....+
T Consensus 120 ~~~~~~~~l~~il~~~~~~~li~~~~~~~~~ 150 (563)
T 1amu_A 120 DIEYPKERIQYILDDSQARMLLTQKHLVHLI 150 (563)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEcCchhhhh
Confidence 5 56888999999999999999888655443
No 61
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=64.20 E-value=75 Score=29.79 Aligned_cols=91 Identities=9% Similarity=-0.010 Sum_probs=65.4
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHH---HHHHHHhcCCeEecC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPV---LYLSLFSLGVVVSPC 114 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~i 114 (349)
++.+|++....| -.+|.+.+...+..... . .++.++|+++...|-...+-. .+++++..|+..+..
T Consensus 183 ~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~---~-~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~ 258 (617)
T 3rg2_A 183 ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVE---I-CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLA 258 (617)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHH---H-HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEEC
T ss_pred CCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHH---h-cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEe
Confidence 677777643222 47899888776655443 3 577999999999886655433 367888889988876
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 115 NPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 115 ~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+. .....+...+++.++.++.....
T Consensus 259 ~~-~~~~~~~~~i~~~~~t~~~~~P~ 283 (617)
T 3rg2_A 259 AD-PSATLCFPLIEKHQVNVTALVPP 283 (617)
T ss_dssp SS-CCHHHHHHHHHHTTCCEEEECHH
T ss_pred CC-CCHHHHHHHHHHhCCcEEEcchH
Confidence 54 56777888899999998887653
No 62
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=62.41 E-value=52 Score=29.96 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=68.6
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++..++++...+ +-.+|.+.+...+..+...+ + +.+++++...++-+..+ +...++++..|+..+..+
T Consensus 13 ~p~~~a~~~~~~~------~~~~Ty~eL~~~~~~lA~~L~~~G-v~~gd~V~i~~~~~~~~-~~~~lA~~~~Ga~~vpl~ 84 (503)
T 4fuq_A 13 LDDPHKLAIETAA------GDKISYAELVARAGRVANVLVARG-LQVGDRVAAQTEKSVEA-LVLYLATVRAGGVYLPLN 84 (503)
T ss_dssp CSCTTSEEEEETT------CCEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSCHHH-HHHHHHHHHTTCEEEECC
T ss_pred CCCCceEEEecCC------CcEEEHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEecC
Confidence 3445555544322 23589999987776654433 4 68899999999875433 457889999999999885
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPV 285 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~ 285 (349)
.+..+++...++..++..++..+..
T Consensus 85 ~~~~~~~l~~il~~~~~~~vi~~~~~ 110 (503)
T 4fuq_A 85 TAYTLHELDYFITDAEPKIVVCDPSK 110 (503)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEECGGG
T ss_pred CCCCHHHHHHHHHhcCCcEEEECchh
Confidence 5688999999999999999987643
No 63
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=60.57 E-value=63 Score=30.64 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=70.1
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.+|++... ..+| ....+|.+.+...+..+... .+ +.++|++...+|..-.+ ...+++++..|+..+.+.
T Consensus 89 ~pd~~Al~~~~-~~~~--~~~~lTY~eL~~~v~~lA~~L~~~G-v~~Gd~V~i~~~~~~e~-vva~lA~~~~Gav~vpl~ 163 (652)
T 1pg4_A 89 NGDRTAIIWEG-DDTS--QSKHISYRELHRDVCRFANTLLDLG-IKKGDVVAIYMPMVPEA-AVAMLACARIGAVHSVIF 163 (652)
T ss_dssp HTTSEEEEEEC-SSTT--CEEEEEHHHHHHHHHHHHHHHHHHT-CCTTCEEEEECCSSHHH-HHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEEEc-CCCC--ceeEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCCHHH-HHHHHHHHHcCcEEEecC
Confidence 46777776432 2122 23578999998776665443 34 68999999999976443 457788999999988884
Q ss_pred -CCCHHHHHHHHHhhcccEEEech
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
.+.++.+...++..++..++...
T Consensus 164 ~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 164 GGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcC
Confidence 67899999999999999888754
No 64
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=60.35 E-value=52 Score=30.52 Aligned_cols=92 Identities=12% Similarity=-0.056 Sum_probs=66.3
Q ss_pred CCCeEEEeCCC-------CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCc-hHHHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTAS-------RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSV-RVPVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++.... +-.+|.+.+.... ..... .++.++|+++...|-+. .+...+++.+..|+..+..+.
T Consensus 213 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~----~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 287 (570)
T 4gr5_A 213 PEDVACVMFTSGSTGRPKGVMSPHRALTGTY----LGQDY-AGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQSG 287 (570)
T ss_dssp TTSEEEEECCSSCCSSCCCEEEEHHHHHHHH----SSCCS-SCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEECSS
T ss_pred CCCeEEEEECCcCCCCCeEEEEecHHHHHHH----Hhhhh-cCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEcCC
Confidence 67888775422 2468888775432 22344 68999999999988653 455667888899998877754
Q ss_pred -CCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 -SCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 -~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
...+..+...+++.++.++......
T Consensus 288 ~~~~~~~~~~~i~~~~vt~~~~~P~~ 313 (570)
T 4gr5_A 288 QNPDPLEIGELVARHGVTMLQLSASL 313 (570)
T ss_dssp SSCCHHHHHHHHHHHTCCEEEEEHHH
T ss_pred ccCCHHHHHHHHHHcCCcEEEecHHH
Confidence 4578888999999999998876543
No 65
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=60.18 E-value=52 Score=30.69 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=71.3
Q ss_pred ccCCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhcc---ccCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEE
Q 045351 182 SVSLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAV---RAARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVC 258 (349)
Q Consensus 182 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~ 258 (349)
...|+.+|++..... | ....+|.+.+......+... .+ +.++|++...++-...+ +..+++++..|+..+.
T Consensus 67 ~~~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~~G-v~~Gd~V~l~~~~~~e~-~~~~lA~~~~Gav~vp 140 (580)
T 3etc_A 67 RDSPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVKHG-IGKGDYVMLTLKSRYDF-WYCMLGLHKLGAIAVP 140 (580)
T ss_dssp HHCTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECTTCTHH-HHHHHHHHHHTCEEEE
T ss_pred hhCCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCHHH-HHHHHHHHhCCEEEEe
Confidence 346788888765331 2 24678999988766665443 34 68999999999865443 3577889999999988
Q ss_pred cC-CCCHHHHHHHHHhhcccEEEech
Q 045351 259 MG-KFDFGRMLKAVEEFRVSHVVLAP 283 (349)
Q Consensus 259 ~~-~~~~~~~~~~i~~~~~t~l~~~P 283 (349)
.. .+.+..+...++..++..++..+
T Consensus 141 l~~~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 141 ATHMLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp CCTTCCHHHHHHHHHHHTCCEEEEES
T ss_pred CCccCCHHHHHHHHHhcCCCEEEEec
Confidence 85 56889999999999999988754
No 66
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=59.68 E-value=43 Score=28.94 Aligned_cols=93 Identities=8% Similarity=-0.067 Sum_probs=65.1
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
+-++.+-.+..+..=||++= -....+.+...+ --+.+|++.++....+-.-..+.++|.++|..+..+-|...+.+..
T Consensus 49 G~~IylK~E~lnptGSfK~R-gA~~~i~~a~~~-g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~ 126 (344)
T 3vc3_A 49 GAYVAVKQEMMQPTASIADR-PAYAMITDAEEK-NLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERR 126 (344)
T ss_dssp CSEEEEEEGGGSTTSBTTHH-HHHHHHHHHHHT-TCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred CCEEEEEecCCCCCCCcHHH-HHHHHHHHHHHc-CCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHH
Confidence 44566655544556677642 223344444444 3468887767777778888888899999999777666666667778
Q ss_pred HHHhhcCCeEEEEcC
Q 045351 125 RQIHLSKPVIAFATH 139 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~ 139 (349)
..++..++++++++.
T Consensus 127 ~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 127 VTMRAFGAELILTDP 141 (344)
T ss_dssp HHHHHTTCEEEEECG
T ss_pred HHHHHcCCEEEEECC
Confidence 889999999999865
No 67
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=58.81 E-value=35 Score=31.30 Aligned_cols=96 Identities=11% Similarity=-0.031 Sum_probs=71.1
Q ss_pred CCCCcEEEEeccCCCCCCceeeechhhHHHHHhhhhccc---cCCCCCcEEEEecChhhHhhHHHHHhhhhcCCEEEEcC
Q 045351 184 SLSDPAAILYSSGTTGMVKGALLTQRNLVAAVAGGHAVR---AARSRPAVVLCTVPYFHSYGFTCCLRSLGMGESLVCMG 260 (349)
Q Consensus 184 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~v~~~ 260 (349)
.++.+|++.. +..+|...+...+..+...+ + +.+++++...++-+..+ +...++++..|+..+..+
T Consensus 36 ~p~~~A~~~~---------~~~~Ty~el~~~~~~lA~~L~~~G-v~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~vpl~ 104 (529)
T 2v7b_A 36 RAGKTAYIDD---------TGSTTYGELEERARRFASALRTLG-VHPEERILLVMLDTVAL-PVAFLGALYAGVVPVVAN 104 (529)
T ss_dssp GTTSEEEECS---------SCEEEHHHHHHHHHHHHHHHHHTT-CCTTCEEEEECCSSTHH-HHHHHHHHHHTCEEEECC
T ss_pred cCCceEEEeC---------CCCccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcHHH-HHHHHHHHHcCceEEecC
Confidence 5667776532 13589998887766654433 4 67899999998865433 356788999999998885
Q ss_pred -CCCHHHHHHHHHhhcccEEEechHHHHHHH
Q 045351 261 -KFDFGRMLKAVEEFRVSHVVLAPPVVLKMA 290 (349)
Q Consensus 261 -~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 290 (349)
.+.++.+...++..++..++..+.....+.
T Consensus 105 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 135 (529)
T 2v7b_A 105 TLLTPADYVYMLTHSHARAVIASGALVQNVT 135 (529)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEEGGGHHHHH
T ss_pred cccCHHHHHHHHhccCCeEEEechhhhhHHH
Confidence 568899999999999999998877655443
No 68
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=57.00 E-value=2.8 Score=39.32 Aligned_cols=31 Identities=29% Similarity=0.187 Sum_probs=26.1
Q ss_pred cCCCCcEEEEeccCCC-CCCceeeechhhHHH
Q 045351 183 VSLSDPAAILYSSGTT-GMVKGALLTQRNLVA 213 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 213 (349)
..++.+.+...||||| |.+|-|..|.+.+-.
T Consensus 95 L~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 95 LTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 4556778999999999 779999999998755
No 69
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=55.84 E-value=3.1 Score=39.07 Aligned_cols=31 Identities=29% Similarity=0.282 Sum_probs=26.1
Q ss_pred cCCCCcEEEEeccCCC-CCCceeeechhhHHH
Q 045351 183 VSLSDPAAILYSSGTT-GMVKGALLTQRNLVA 213 (349)
Q Consensus 183 ~~~~~~~~i~~TSGtT-G~pK~v~~t~~~l~~ 213 (349)
..++.+.+..-||||| |.+|-|..|.+.+-.
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 4566778999999999 679999999998754
No 70
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=55.74 E-value=53 Score=32.95 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=68.5
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH--HHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV--PVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++-...| -.+|.+.+...+...........++.++|++....|-...+ ...++..+..|+..+..+
T Consensus 224 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~ 303 (979)
T 3tsy_A 224 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMP 303 (979)
T ss_dssp TTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECS
T ss_pred ccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeC
Confidence 788888753222 47899988777655444333226789999999988865433 344678888999888764
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
....+.+...+++.++.++.....
T Consensus 304 -~~~~~~~~~~i~~~~~t~~~~~P~ 327 (979)
T 3tsy_A 304 -KFEINLLLELIQRCKVTVAPMVPP 327 (979)
T ss_dssp -SCCHHHHHHHHHHHTCCEEEECHH
T ss_pred -CCCHHHHHHHHHHhCCeEEEcHHH
Confidence 567888899999999999887653
No 71
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=54.45 E-value=60 Score=30.61 Aligned_cols=91 Identities=11% Similarity=-0.058 Sum_probs=64.6
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCC-
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCN- 115 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~- 115 (349)
++.+|++-. .+| -.+|.+.+...+ ..... .++.++|+++...+-+.+. +..+++.+..|++.+..+
T Consensus 163 ~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~----~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~ 237 (620)
T 4dg8_A 163 ADQIAYINFSSGTTGRPKAIACTHAGITRLC----LGQSF-LAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDL 237 (620)
T ss_dssp TTSEEEEEEEBSSSSSCEEEEEEHHHHHHHH----SSCGG-GTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCS
T ss_pred CCCeEEEEECCCccccCeEEEEchHHHHHHH----HHHHh-hCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCcc
Confidence 677777642 223 468888775433 22344 7899999999998866554 444678888999877763
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
....++.+...+++.++..+.....
T Consensus 238 ~~~~~~~~~~~i~~~~vt~~~~~Ps 262 (620)
T 4dg8_A 238 GPLDPGVLRQLIGERGADSAWLTAS 262 (620)
T ss_dssp SSCCHHHHHHHHHTTCCCEEEEEHH
T ss_pred ccCCHHHHHHHHHHhCCcEEEccHH
Confidence 3567888999999999988877654
No 72
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=53.68 E-value=23 Score=31.06 Aligned_cols=64 Identities=14% Similarity=-0.043 Sum_probs=41.5
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-----CCCHHHHHHHHhhcC--CeEEEEcC
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-----SCTIPEILRQIHLSK--PVIAFATH 139 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~~--~~~i~~~~ 139 (349)
...|.. .++++||.|++-.+.... ..-++...|+.++.++. ....+++...+...+ .++|+...
T Consensus 67 ~~al~~-l~~~~Gd~Vi~~~~~~~~---~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~~ 137 (377)
T 3ju7_A 67 MAAIQL-KKRKKGKYALMPSFTFPA---TPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPYA 137 (377)
T ss_dssp HHHHHH-HSCTTCCEEEEESSSCTH---HHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCBC
T ss_pred HHHHHH-cCCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEEC
Confidence 334555 678999999887654443 33456678987666543 247788888774444 67777543
No 73
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=52.99 E-value=67 Score=27.57 Aligned_cols=92 Identities=10% Similarity=-0.128 Sum_probs=59.1
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEIL 124 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 124 (349)
.++.+-.++.+..=||++--. ...+.. ..+ .| +++|+.|.+....+-.-..+.++|.+.|..++.+-|...+.+-.
T Consensus 35 ~~i~~K~E~~~ptGSfK~R~a-~~~i~~-a~~-~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~ 111 (334)
T 3tbh_A 35 AKVVLKMECENPMASVKDRLG-FAIYDK-AEK-EGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERR 111 (334)
T ss_dssp SEEEEEEGGGSTTSBTHHHHH-HHHHHH-HHH-TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred CEEEEEeCCCCCccCcHHHHH-HHHHHH-HHH-cCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHH
Confidence 355555553344556665422 222333 333 45 58888865555666677778888888898766665555555667
Q ss_pred HHHhhcCCeEEEEcCc
Q 045351 125 RQIHLSKPVIAFATHD 140 (349)
Q Consensus 125 ~~l~~~~~~~i~~~~~ 140 (349)
..++..++++++++..
T Consensus 112 ~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 112 CLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHCCCEEEEECCC
Confidence 7788999999999753
No 74
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=52.07 E-value=43 Score=28.95 Aligned_cols=80 Identities=13% Similarity=-0.037 Sum_probs=47.6
Q ss_pred eeeHHHHHHHH--HHHH-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeE-ecCCCCCCHHHHHHHHhhcCCe
Q 045351 58 RILYPDLTLRI--KTLA-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVV-SPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 58 ~~Ty~~l~~~~--~~~a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~-v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
.+++.+..... --.| +.|....++++|++|+|....+.--..+...+...|+.. +.++.....++....++..+++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE 218 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc
Confidence 46777654321 1223 234332589999999999985554444444455678854 4444444444455566778888
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 219 ~vi~ 222 (357)
T 1zsy_A 219 HVIT 222 (357)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7774
No 75
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=51.92 E-value=94 Score=28.25 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=66.1
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
++.+|++....| -.+|.+.+...+....... . .++.+++++....+-+... +..+++++..|+..+..+.
T Consensus 144 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 221 (521)
T 3l8c_A 144 GDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDA-A-FDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPK 221 (521)
T ss_dssp TTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCT-T-TCCCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECCG
T ss_pred CCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhcc-c-cCCCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcCH
Confidence 677777653222 4689998887655444332 2 5778889988887765443 4556778889998887764
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 117 S--CTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 117 ~--~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
. ....++...+++.++.++......
T Consensus 222 ~~~~~~~~~~~~i~~~~~t~~~~~P~~ 248 (521)
T 3l8c_A 222 ELVADFKQLFTTIAQLPVGIWTSTPSF 248 (521)
T ss_dssp GGTTCHHHHHHHHHHSCCSEEEECHHH
T ss_pred HHhhCHHHHHHHHHHcCCcEEEeCCCH
Confidence 4 367788888999999888876543
No 76
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=49.98 E-value=56 Score=30.16 Aligned_cols=93 Identities=13% Similarity=0.068 Sum_probs=65.7
Q ss_pred CCCeEEEeCCCC-------ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH--HHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDTASR-------HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV--PVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~~~~-------~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++....| -.+|.+.+...+..+.. .. .++.++|+++...|-...+ ...+++.+..|+..+.+.
T Consensus 175 ~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~--~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~ 251 (576)
T 3gqw_A 175 PNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISH--DG-IKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLR 251 (576)
T ss_dssp TTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHH--TT-SCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECC
T ss_pred CCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhh--cc-cCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcc
Confidence 678888754322 47899988776554432 22 5789999999998876653 345677788888887765
Q ss_pred CC---CCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PS---CTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~---~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+. ..+..+...+++.++.+++....
T Consensus 252 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 279 (576)
T 3gqw_A 252 TQDFAMRPLQWLKLISKNRGTVSVAPPF 279 (576)
T ss_dssp HHHHHHCTTHHHHHHHHTTCCEEEECHH
T ss_pred hhHhhhCHHHHHHHHHHhCCeEEEcCHH
Confidence 41 35667888889999998887653
No 77
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=49.17 E-value=44 Score=28.34 Aligned_cols=75 Identities=8% Similarity=-0.024 Sum_probs=48.1
Q ss_pred eeeHHHHHHHHHH--HH-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKT--LA-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+....... .| +.|+. .++++|++|+|....+.--..+...+...|+.++.+. +.++ ...+++.+++.
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHH-TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHh-cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 4677765543222 22 34444 7899999999997666555555555667898776553 4455 45667778776
Q ss_pred EEE
Q 045351 135 AFA 137 (349)
Q Consensus 135 i~~ 137 (349)
++.
T Consensus 200 ~i~ 202 (321)
T 3tqh_A 200 CIN 202 (321)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 78
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=46.79 E-value=37 Score=29.13 Aligned_cols=76 Identities=7% Similarity=-0.026 Sum_probs=48.8
Q ss_pred eeeHHHHHHHHHH--HH-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKT--LA-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+....... .| +.++. .++++||+|+|..--+.-...+.+|....|+.++-++. +.++ ....+..+++.
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~--~~~r-~~~~~~~Ga~~ 211 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKV-SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI--NQDK-LNLAKKIGADV 211 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEES--CHHH-HHHHHHTTCSE
T ss_pred CCCHHHHhhcccceeeEEeeecc-cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC--cHHH-hhhhhhcCCeE
Confidence 4666664433222 22 33555 79999999999987666677777777667777776643 3443 34566677777
Q ss_pred EEE
Q 045351 135 AFA 137 (349)
Q Consensus 135 i~~ 137 (349)
++-
T Consensus 212 ~i~ 214 (348)
T 4eez_A 212 TIN 214 (348)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 79
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=45.07 E-value=34 Score=29.64 Aligned_cols=89 Identities=7% Similarity=0.008 Sum_probs=57.0
Q ss_pred CCCeEEE---eCCCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALI---DTASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~---~~~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~ 116 (349)
.|.+|++ .+.+| -.+|++.+...+...+. . +++.++|+++..+|-...+ +..++..+..|+..+..++
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~ 111 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGK---A-LSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEP 111 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHH---H-TTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHH---H-hCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCc
Confidence 3455554 33344 46899988776554443 3 6789999999998865433 4445666777887776665
Q ss_pred CCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 117 SCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 117 ~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
.... ...+++.++..+.....
T Consensus 112 ~~~~---~~~i~~~~~t~~~~~P~ 132 (358)
T 4gs5_A 112 TANP---LAGLDHADFDFVAMVPM 132 (358)
T ss_dssp CSCT---TTTCSSCCCSEEEECHH
T ss_pred cccH---HHHHHHhCCeEEEcChH
Confidence 4332 34566777777776544
No 80
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=44.62 E-value=1.5e+02 Score=26.86 Aligned_cols=90 Identities=14% Similarity=0.049 Sum_probs=61.6
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchH--HHHHHHHHhcCCeEecCC
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRV--PVLYLSLFSLGVVVSPCN 115 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~i~ 115 (349)
++.+|++.. .+| -.+|.+.+...+..++.. .++.++|+++...|-...+ +..+++.+..|+.++..+
T Consensus 154 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 154 DGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADA----WQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp TTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHH----HTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHH----hCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 667777643 223 468999888777655543 5678999999888755433 334788889999988775
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 116 PSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 116 ~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
....+.+...+ +.++..++....
T Consensus 230 -~~~~~~~~~~i-~~~~t~~~~~P~ 252 (505)
T 3nyq_A 230 -RFSTEGAAREL-NDGATMLFGVPT 252 (505)
T ss_dssp -SCCHHHHHHHH-TTTCCEEEECHH
T ss_pred -CCChHHHHHHH-hhCCeEEEehHH
Confidence 45666666666 567777776544
No 81
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=43.74 E-value=66 Score=27.38 Aligned_cols=62 Identities=8% Similarity=-0.176 Sum_probs=41.9
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
+.|.+..++++|++|+|....+.--..+...+...|+.++.+.. +.++++.+.+..+.+.++
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG--GAEKCRFLVEELGFDGAI 200 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTTCCSEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHcCCCEEE
Confidence 34523378999999999998665555555555678987766643 556666555677776655
No 82
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=41.02 E-value=1.4e+02 Score=25.21 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=40.1
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.+..++++|++|+|....+.--..+...+...|+.++.+.. +.+++. .+++.+.+.++.
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~ 199 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS--TDEKLK-IAKEYGAEYLIN 199 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSEEEE
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCcEEEe
Confidence 333248999999999986665555555555678988776654 455554 556677776664
No 83
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=40.44 E-value=1e+02 Score=26.29 Aligned_cols=58 Identities=9% Similarity=-0.037 Sum_probs=34.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.++||.|++..+....+.....++...|+.++.++.. ...+++...++. ++++|+...
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 3678888776554444444444445678776665432 456777777654 566666543
No 84
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=40.08 E-value=92 Score=28.68 Aligned_cols=84 Identities=10% Similarity=0.026 Sum_probs=59.5
Q ss_pred ceeeHHHHHHHHHHHHHHHhh----hcCCCCCCEEEEEcCCCchH-HHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcC
Q 045351 57 HRILYPDLTLRIKTLAYSLKT----KYKLSKYDVAFLLSQNSVRV-PVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSK 131 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~----~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~ 131 (349)
-.+|.+.+...+..++..+.. ...+...+++....+..... +..++..+..|+..+........+.+...+++.+
T Consensus 193 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (562)
T 3ite_A 193 VRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELG 272 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTT
T ss_pred EEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcC
Confidence 468999998888877776531 14577888888877766543 4446778888988886654434456677888888
Q ss_pred CeEEEEcCc
Q 045351 132 PVIAFATHD 140 (349)
Q Consensus 132 ~~~i~~~~~ 140 (349)
+.++.....
T Consensus 273 ~t~~~~~P~ 281 (562)
T 3ite_A 273 VTHAGIVPS 281 (562)
T ss_dssp CCEEEECHH
T ss_pred CCEEEcCHH
Confidence 888877554
No 85
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.76 E-value=1.1e+02 Score=27.29 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHH-HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYL-SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~l-A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-......+- .+...|+.++.++.. ..++++..++. +.++|+..
T Consensus 118 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-d~~~l~~ai~~-~t~~v~~e 174 (430)
T 3ri6_A 118 ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-DSLAVEHACDE-TTKLLFLE 174 (430)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhhCC-CCeEEEEE
Confidence 4566666544332222222211 444566666555544 45555555543 44555543
No 86
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=37.91 E-value=77 Score=27.38 Aligned_cols=77 Identities=9% Similarity=-0.088 Sum_probs=47.6
Q ss_pred ceeeHHHHHHHHHH---HHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRIKT---LAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~---~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
..+++.+....... ..+.|.+..++++|++|+|.. .+.--..+...+...|+.++.+.. +.+++.. +++.+++
T Consensus 160 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~--~~~~~~~-~~~lGa~ 235 (363)
T 3uog_A 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS--SREKLDR-AFALGAD 235 (363)
T ss_dssp TTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES--CHHHHHH-HHHHTCS
T ss_pred CCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec--CchhHHH-HHHcCCC
Confidence 35677775433211 223443337899999999998 565555555555678987776643 4444444 5667787
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 236 ~vi~ 239 (363)
T 3uog_A 236 HGIN 239 (363)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7764
No 87
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=37.89 E-value=86 Score=26.94 Aligned_cols=56 Identities=9% Similarity=0.003 Sum_probs=37.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-------CCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-------CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-------~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.++||.|++..+.-.. ...++...|+.++.++.. ...+++...++..++++|+...
T Consensus 106 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNM---FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp SCTTCEEEECSSCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCeEEECCCCcHH---HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 4688888766543333 344566788877776543 6788999988766778776543
No 88
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=37.88 E-value=1.1e+02 Score=26.47 Aligned_cols=58 Identities=14% Similarity=0.045 Sum_probs=38.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhc--CCeEEEEcC
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLS--KPVIAFATH 139 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~--~~~~i~~~~ 139 (349)
.++++||.|++..+....+. .++...|+.++.++.. ...+++...++.. ++++|+...
T Consensus 67 l~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 67 AGVKQDDIVLASSFTFIASV---APICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp TTCCTTCEEEEESSSCGGGT---HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred cCCCCCCEEEECCCccHHHH---HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 45788999988877655543 3344578876665432 4678888888764 567666654
No 89
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=36.86 E-value=74 Score=20.49 Aligned_cols=45 Identities=13% Similarity=0.026 Sum_probs=31.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
..+.+.++.+ .+.+ ++..+++.|.++|..+.....+...+...|.
T Consensus 22 ~~ip~~~l~~-------~~~~-l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~ 66 (85)
T 2jtq_A 22 INIPLKEVKE-------RIAT-AVPDKNDTVKVYCNAGRQSGQAKEILSEMGY 66 (85)
T ss_dssp EECCHHHHHH-------HHHH-HCCCTTSEEEEEESSSHHHHHHHHHHHHTTC
T ss_pred EEcCHHHHHH-------HHHH-hCCCCCCcEEEEcCCCchHHHHHHHHHHcCC
Confidence 4556666543 4555 6677888999999888777666666777775
No 90
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=36.25 E-value=98 Score=22.01 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=39.4
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--CCCCHHHHHH
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--PSCTIPEILR 125 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~~~~~~~l~~ 125 (349)
+.+|.+ .|+.+...+.+...+..+.+-++-=++++|...+.+- +..+..+.++
T Consensus 47 ~~~L~~-~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~RR 101 (119)
T 1ofu_X 47 HEWLRR-AGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAARKQ 101 (119)
T ss_dssp HHHHHH-TTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHHH
T ss_pred HHHHHH-cCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHHHH
Confidence 567777 8999998888888888888888888899887544442 3555555444
No 91
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=36.07 E-value=97 Score=26.48 Aligned_cols=74 Identities=9% Similarity=-0.120 Sum_probs=44.4
Q ss_pred eeeHHHHHHHHHH--H-HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKT--L-AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~-a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+....... . -+.|.. .++++|++|+|... +.--..+...+...|+.++.+...- ++++ .+++.+++.
T Consensus 149 ~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~-~~~~lGa~~ 223 (348)
T 3two_A 149 NAPLEKVAPLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNE--HKKQ-DALSMGVKH 223 (348)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSS--TTHH-HHHHTTCSE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH--HHHH-HHHhcCCCe
Confidence 4666665422111 1 234565 79999999999976 5444444444556798777665432 3332 445677877
Q ss_pred EE
Q 045351 135 AF 136 (349)
Q Consensus 135 i~ 136 (349)
++
T Consensus 224 v~ 225 (348)
T 3two_A 224 FY 225 (348)
T ss_dssp EE
T ss_pred ec
Confidence 77
No 92
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=35.96 E-value=1.1e+02 Score=23.16 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=22.6
Q ss_pred HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 72 AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 72 a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
+.+|.+ .|+.+...+.|...+..+.+-++-=++++|..
T Consensus 89 ~~~L~~-~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~ 126 (161)
T 1oft_A 89 HEWLRR-AGLNRERILLLQAKDNAAALALSCEALRLGRS 126 (161)
T ss_dssp HHHHHH-TTCCGGGEEEECCSSTTHHHHHHHHHHHTTCE
T ss_pred HHHHHH-cCCCHHHEEEEECCChHHHHHHHHHHHhcCCc
Confidence 344454 56666666666666666666666666666654
No 93
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=35.36 E-value=37 Score=20.11 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=15.1
Q ss_pred HhhhcCCCCCCEEEEEcCCC
Q 045351 75 LKTKYKLSKYDVAFLLSQNS 94 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~ 94 (349)
+++++|+++||.|.+...+.
T Consensus 20 ir~~lgi~~Gd~v~i~~~~~ 39 (53)
T 2l66_A 20 VRQKFQIKEGDLVKVTFDES 39 (53)
T ss_dssp HHHHSCCCTTCEEEEEECSS
T ss_pred HHHHcCcCCCCEEEEEEECC
Confidence 34449999999998886543
No 94
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=34.79 E-value=1.6e+02 Score=24.81 Aligned_cols=56 Identities=14% Similarity=0.041 Sum_probs=36.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C----CCCHHHHHHHHhh----cCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P----SCTIPEILRQIHL----SKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~----~~~~~~l~~~l~~----~~~~~i~~~~ 139 (349)
+++||.|++..+....+.. ++...|+.++.++ . ....++++..+++ -++++++...
T Consensus 90 ~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYV---AAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHH---HHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHH---HHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 5788988877654443333 3667888776665 2 2367888888875 3566666654
No 95
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=34.75 E-value=93 Score=26.97 Aligned_cols=58 Identities=9% Similarity=-0.071 Sum_probs=38.3
Q ss_pred HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 74 SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
.+.. .++++|++|+|... +.--..+...+...|+ .++.++. +.+. ..+++..+++.++
T Consensus 174 ~l~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~~vi 232 (370)
T 4ej6_A 174 GVDL-SGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTR--QATK-RRLAEEVGATATV 232 (370)
T ss_dssp HHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS--CHHH-HHHHHHHTCSEEE
T ss_pred HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC--CHHH-HHHHHHcCCCEEE
Confidence 4555 78999999999987 5544445555556888 6666543 3444 3456667777666
No 96
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=34.44 E-value=1.2e+02 Score=25.80 Aligned_cols=76 Identities=8% Similarity=0.041 Sum_probs=46.4
Q ss_pred ceeeHHHHHHHHH---HHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRIK---TLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~~---~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
..+++.+...... ..-+.|.. .++++|++|+|...-+.-...+.+| ...|+.++.++. +.+.++ .+++.+++
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~ 212 (340)
T 3s2e_A 138 DKVGFVEIAPILCAGVTVYKGLKV-TDTRPGQWVVISGIGGLGHVAVQYA-RAMGLRVAAVDI--DDAKLN-LARRLGAE 212 (340)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHT-TTCCTTSEEEEECCSTTHHHHHHHH-HHTTCEEEEEES--CHHHHH-HHHHTTCS
T ss_pred CCCCHHHhhcccchhHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeC--CHHHHH-HHHHcCCC
Confidence 3466666542211 12234555 7899999999987644555555555 467987776643 444444 45667777
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 213 ~~i~ 216 (340)
T 3s2e_A 213 VAVN 216 (340)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 97
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=33.88 E-value=87 Score=26.97 Aligned_cols=80 Identities=10% Similarity=-0.125 Sum_probs=45.4
Q ss_pred eeeHHHHHHHH--HHHH-HHHhhhcCCCCC-CEEEEEcCCCchHHHHHHHHHhcCCeEecCC-CCCCHHHHHHHHhhcCC
Q 045351 58 RILYPDLTLRI--KTLA-YSLKTKYKLSKY-DVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN-PSCTIPEILRQIHLSKP 132 (349)
Q Consensus 58 ~~Ty~~l~~~~--~~~a-~~L~~~~g~~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~-~~~~~~~l~~~l~~~~~ 132 (349)
.+++.+..... -..| +.|....++++| ++|+|....+.--..+...+...|+.++.+. .....++....++..++
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA 217 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC
Confidence 47777644321 2223 334441379999 9999998755444444444456788655553 22221333344567788
Q ss_pred eEEEE
Q 045351 133 VIAFA 137 (349)
Q Consensus 133 ~~i~~ 137 (349)
+.++.
T Consensus 218 ~~vi~ 222 (364)
T 1gu7_A 218 TQVIT 222 (364)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 87764
No 98
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.83 E-value=1.5e+02 Score=23.14 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=41.2
Q ss_pred CEEEEEcCCC----chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 85 DVAFLLSQNS----VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 85 d~V~i~~~n~----~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
.+|++.+..+ ....++...+-..|.-++-+....+.+++...+++.++++|.....
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3555555433 2333444445578999999999999999999999999999998753
No 99
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=33.81 E-value=30 Score=28.83 Aligned_cols=24 Identities=25% Similarity=0.205 Sum_probs=20.2
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQN 93 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n 93 (349)
..+.+.|++ +|+++||.|.|...-
T Consensus 18 ~~l~~~L~~-LGi~~Gd~llVHsSl 41 (268)
T 3ijw_A 18 KTITNDLRK-LGLKKGMTVIVHSSL 41 (268)
T ss_dssp HHHHHHHHH-HTCCTTCEEEEEECT
T ss_pred HHHHHHHHH-cCCCCCCEEEEEech
Confidence 456778998 999999999999763
No 100
>4hlb_A Uncharacterized protein; alpha-lytic protease prodomain-like fold, structural genomic center for structural genomics, JCSG; 1.80A {Desulfovibrio piger}
Probab=32.86 E-value=96 Score=20.20 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=31.3
Q ss_pred CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEc
Q 045351 55 SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLS 91 (349)
Q Consensus 55 ~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~ 91 (349)
.++.+|.+++...+.+-.+.|+++.|+.+.-.++-.+
T Consensus 60 adrkmtraefsaiasrsirelkerfgfdkdvpigavl 96 (115)
T 4hlb_A 60 ADRKMTRAEFSAIASRSIRELKERFGFDKDVPIGAVL 96 (115)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCCcCCccceeE
Confidence 3799999999999999999999988998876665544
No 101
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=32.36 E-value=99 Score=26.61 Aligned_cols=57 Identities=16% Similarity=0.060 Sum_probs=35.9
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--CC---CCHHHHHHHHhhcCCeEEEEcC
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--PS---CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~~---~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.++++||.|++..+....+ .-++...|+.++.++ +. ...++++..++. ++++|+...
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 135 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVST---LNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH 135 (393)
T ss_dssp TTCCTTCEEEEESSSCHHH---HHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC
T ss_pred cCCCCCCEEEeCCCccHhH---HHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC
Confidence 4578899988775543333 345566787665554 22 567788777754 567776654
No 102
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=32.26 E-value=84 Score=26.94 Aligned_cols=75 Identities=7% Similarity=-0.122 Sum_probs=45.2
Q ss_pred eeeHHHHHHH--HHHH-HHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCe
Q 045351 58 RILYPDLTLR--IKTL-AYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 58 ~~Ty~~l~~~--~~~~-a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
.+++.+.... .-.. .+.++. .++++|++|+|... +.--..+...+...|+ .++.++. +.+. ...+++.+++
T Consensus 139 ~~~~~~aa~~~~~~~ta~~al~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~--~~~~-~~~~~~lGa~ 213 (352)
T 3fpc_A 139 EIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGS--RKHC-CDIALEYGAT 213 (352)
T ss_dssp TSCHHHHTTTTTHHHHHHHHHHH-TTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECC--CHHH-HHHHHHHTCC
T ss_pred CCCHHHHhhccchhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECC--CHHH-HHHHHHhCCc
Confidence 4566654322 1112 233555 89999999999975 5545555555567888 5665643 3343 3456677887
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 214 ~vi~ 217 (352)
T 3fpc_A 214 DIIN 217 (352)
T ss_dssp EEEC
T ss_pred eEEc
Confidence 7664
No 103
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=32.07 E-value=1e+02 Score=27.68 Aligned_cols=77 Identities=6% Similarity=-0.066 Sum_probs=48.0
Q ss_pred eeeHHHHHHHH--HHHHH-HHhh--hcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCC
Q 045351 58 RILYPDLTLRI--KTLAY-SLKT--KYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKP 132 (349)
Q Consensus 58 ~~Ty~~l~~~~--~~~a~-~L~~--~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 132 (349)
.+++.+..... .-.|. .|.. ..++++|++|+|....+.--..+...+...|+.++.+.. +.++++ .++..++
T Consensus 198 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~--~~~~~~-~~~~lGa 274 (456)
T 3krt_A 198 HLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS--SPQKAE-ICRAMGA 274 (456)
T ss_dssp TSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHHTC
T ss_pred CCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC--CHHHHH-HHHhhCC
Confidence 46777654222 12222 2332 147999999999988666666666666678987666652 555544 4577788
Q ss_pred eEEEE
Q 045351 133 VIAFA 137 (349)
Q Consensus 133 ~~i~~ 137 (349)
+.++.
T Consensus 275 ~~vi~ 279 (456)
T 3krt_A 275 EAIID 279 (456)
T ss_dssp CEEEE
T ss_pred cEEEe
Confidence 77764
No 104
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=31.95 E-value=33 Score=28.66 Aligned_cols=22 Identities=23% Similarity=0.215 Sum_probs=19.0
Q ss_pred HHHHHHhhhcCCCCCCEEEEEcC
Q 045351 70 TLAYSLKTKYKLSKYDVAFLLSQ 92 (349)
Q Consensus 70 ~~a~~L~~~~g~~~gd~V~i~~~ 92 (349)
.+.+.|++ +||++||.|.|...
T Consensus 17 ~L~~~L~~-LGI~~Gd~llVHsS 38 (273)
T 2nyg_A 17 SITEDLKA-LGLKKGMTVLVHSS 38 (273)
T ss_dssp HHHHHHHH-HTCCTTCEEEEEEC
T ss_pred HHHHHHHH-cCCCCCCEEEEEec
Confidence 35677998 99999999999976
No 105
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=31.94 E-value=37 Score=20.82 Aligned_cols=19 Identities=11% Similarity=0.232 Sum_probs=14.4
Q ss_pred HhhhcCCCCCCEEEEEcCC
Q 045351 75 LKTKYKLSKYDVAFLLSQN 93 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n 93 (349)
+++++|+++||.|.+...+
T Consensus 30 iR~~Lgi~~Gd~l~i~~~~ 48 (59)
T 1yfb_A 30 LRRTLGIAEKDALEIYVDD 48 (59)
T ss_dssp HHHHTTCCTTCEEEEEEET
T ss_pred HHHHcCCCCCCEEEEEEEC
Confidence 3334999999999887654
No 106
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=31.61 E-value=34 Score=28.76 Aligned_cols=30 Identities=17% Similarity=0.146 Sum_probs=24.0
Q ss_pred CCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcC
Q 045351 55 SRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQ 92 (349)
Q Consensus 55 ~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~ 92 (349)
+++.+|-++| .+.|++ +||++||.|.|...
T Consensus 18 ~~~~~T~~~L-------~~~L~~-LGI~~Gd~llVHsS 47 (286)
T 3sma_A 18 DRELVTRDRL-------ASDLAA-LGVRPGGVLLVHAS 47 (286)
T ss_dssp -CCEECHHHH-------HHHHHH-HTCCTTCEEEEEEC
T ss_pred cCCCcCHHHH-------HHHHHH-cCCCCCCEEEEEec
Confidence 3577877766 556888 99999999999976
No 107
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=31.55 E-value=2e+02 Score=24.64 Aligned_cols=55 Identities=5% Similarity=-0.019 Sum_probs=38.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhc---CCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLS---KPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~---~~~~i~~~~ 139 (349)
+++||.|++..+....+ .-++...|+.+++++. ...+.++..++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~~~~---~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASI---IDGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHH---HHHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHH---HHHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 57899988876644433 3456668988887764 5678888888765 577777654
No 108
>1zd0_A Hypothetical protein PF0523; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: d.329.1.1
Probab=31.44 E-value=78 Score=23.65 Aligned_cols=58 Identities=9% Similarity=0.079 Sum_probs=37.4
Q ss_pred HHHHHHHhhhcCCCCCC-EEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhc
Q 045351 69 KTLAYSLKTKYKLSKYD-VAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLS 130 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd-~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~ 130 (349)
+++..+|+. .|+++|+ .++++..+..+-+--+ .-..|+..++++- ...+.+...+++.
T Consensus 86 rQIs~Alk~-~Gi~~g~n~ivv~i~~~e~~~~~l--~~~i~g~~v~l~~-~d~~~iKk~~e~~ 144 (150)
T 1zd0_A 86 RQIKEAIKK-VGAKEGENYIVTFGENASALLQKI--LSTLEIKELELER-CDLEYAKKAFEDI 144 (150)
T ss_dssp SSHHHHHHH-HBCCSEEEEEEEESTTHHHHHHHH--HHHTTCEEECCCC-CCHHHHHHHHHHH
T ss_pred chHHHHHHH-hCCCCCCceEEEEEcCcHHHHHHH--HHHhCCeeccccc-CCHHHHHHHHHHH
Confidence 345666776 8999994 5555555544433222 3456888999876 6777777776654
No 109
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=31.21 E-value=1.8e+02 Score=24.77 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCCCc------hHHHHHHH-HHhcCCeEecCCCC------------CCHHHHHHHHhhcCCeEEEEcC
Q 045351 80 KLSKYDVAFLLSQNSV------RVPVLYLS-LFSLGVVVSPCNPS------------CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~------~~~~~~lA-~~~~G~~~v~i~~~------------~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
-+++||+|+|++|.+. +-+-.... +-..|..++.-..- ...+++..++.+-+.++|+|..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 4788999999988653 11222222 22346665543211 1244667777778889999975
No 110
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=30.66 E-value=1.8e+02 Score=25.46 Aligned_cols=61 Identities=10% Similarity=-0.048 Sum_probs=37.9
Q ss_pred cCCCCCCEEEEEcCCCch------HHHHHHHHH-hcCCeEecCCCC------------CCHHHHHHHHhhcCCeEEEEcC
Q 045351 79 YKLSKYDVAFLLSQNSVR------VPVLYLSLF-SLGVVVSPCNPS------------CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~i~~~------------~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
--+++||+|+|++|.+.- -+-.-...+ ..|..++.-... ...+++..++.+-++++|+|..
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 468999999999998742 222222223 367766543211 1234566667777889999975
No 111
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=30.57 E-value=1e+02 Score=22.66 Aligned_cols=50 Identities=6% Similarity=-0.104 Sum_probs=26.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEE
Q 045351 85 DVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIA 135 (349)
Q Consensus 85 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i 135 (349)
|.|.++.| .....-.+..|...|...+.+.+....+++....++.+..++
T Consensus 72 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~i~~~~~~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 72 DMVDVFRN-SEAAWGVAQEAIAIGAKTLWLQLGVINEQAAVLAREAGLSVV 121 (145)
T ss_dssp SEEECCSC-STHHHHHHHHHHHHTCCEEECCTTCCCHHHHHHHHTTTCEEE
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCChHHHHHHHHHHHcCCEEE
Confidence 55555555 334444444455566555555555555666666665555443
No 112
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=30.51 E-value=1.6e+02 Score=25.49 Aligned_cols=58 Identities=19% Similarity=0.142 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++..+..... ...-++...|+.++.++.. ...+++...++..++++|+...
T Consensus 83 ~~~gd~Vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGY-LLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCcccH-HHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
Confidence 46777777665432211 1233455567655444322 3567777777655566666543
No 113
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=30.30 E-value=1.7e+02 Score=30.35 Aligned_cols=93 Identities=11% Similarity=0.028 Sum_probs=66.0
Q ss_pred CCCeEEEeC---CCC----ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHH-HHHHHHHhcCCeEecCCC
Q 045351 45 PDTTALIDT---ASR----HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVP-VLYLSLFSLGVVVSPCNP 116 (349)
Q Consensus 45 ~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~i~~ 116 (349)
|+.+|++-. .+| -.+|.+.+... ...... .++.++|+++...+-+.+.. .-+++.+..|++.+..+.
T Consensus 606 ~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~----~~~~~~-~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 680 (1304)
T 2vsq_A 606 PNDPAYIMYTSGTTGKPKGNITTHANIQGL----VKHVDY-MAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADE 680 (1304)
T ss_dssp TTSEEEEEEECCSSSSCEEEEEEHHHHHHH----HSSCCS-SCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCG
T ss_pred CCCeEEEEeCCCCCCCCCEEEEehHHHHHH----HHHHHh-cCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECCh
Confidence 677777643 223 46888887642 223344 78999999999888776554 447788889998887765
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEcCccc
Q 045351 117 --SCTIPEILRQIHLSKPVIAFATHDTA 142 (349)
Q Consensus 117 --~~~~~~l~~~l~~~~~~~i~~~~~~~ 142 (349)
...++.+...+++.++.++.......
T Consensus 681 ~~~~~~~~l~~~i~~~~vt~~~~~p~~~ 708 (1304)
T 2vsq_A 681 HTLLDTERLTDLILQENVNVMFATTALF 708 (1304)
T ss_dssp GGTTCHHHHHHHHHHHTCCEEEEEHHHH
T ss_pred hhcCCHHHHHHHHHHcCCcEEEccHHHH
Confidence 35778899999999998887765433
No 114
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=30.19 E-value=71 Score=24.67 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=31.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHH
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLS 103 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA 103 (349)
--+|..|+.+++.++|+.+.+++.- .+.|++...++-..+...|+
T Consensus 12 vlis~~~I~~~i~rlA~eI~e~~~~--~~~vlvgIl~Gg~~fa~~L~ 56 (181)
T 3acd_A 12 VQISAEAIKKRVEELGGEIARDYQG--KTPHLICVLNGAFIFMADLV 56 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTT--CCCEEEEEETTTHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHHHHHHhCC--CCcEEEEEecCcHHHHHHHH
Confidence 4689999999999999999884332 34455555566555555553
No 115
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=29.14 E-value=1e+02 Score=26.52 Aligned_cols=60 Identities=10% Similarity=-0.053 Sum_probs=37.3
Q ss_pred HHhhhcCCC-CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 74 SLKTKYKLS-KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 74 ~L~~~~g~~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.|.. .+++ +|++|+|...-+.-...+.+| ...|+.++.+.. +.+++..+.+..+++.++.
T Consensus 171 ~l~~-~~~~~~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~vi~ 231 (357)
T 2cf5_A 171 PLSH-FGLKQPGLRGGILGLGGVGHMGVKIA-KAMGHHVTVISS--SNKKREEALQDLGADDYVI 231 (357)
T ss_dssp HHHH-TSTTSTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEES--STTHHHHHHTTSCCSCEEE
T ss_pred HHHh-cCCCCCCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeC--ChHHHHHHHHHcCCceeec
Confidence 3555 7888 999999998644444444444 457887665543 3344444444667766654
No 116
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=29.12 E-value=90 Score=26.54 Aligned_cols=57 Identities=12% Similarity=0.020 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
++||.|++..+..+.+......+-+.|+.++.++.. ...++++..++. ++++++...
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 146 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQH 146 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCS
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEEC
Confidence 567777776655555554444444567665554432 356677666643 445555543
No 117
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=28.79 E-value=1.8e+02 Score=24.94 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C--CCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P--SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~--~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+....+ ...-++...|+.++.++ . ....+++...++..++++|+..
T Consensus 90 ~~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAE-RAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccH-HHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 35788887776543332 22224556677655443 2 3567788887766456666654
No 118
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=28.73 E-value=1.7e+02 Score=24.84 Aligned_cols=78 Identities=12% Similarity=-0.037 Sum_probs=46.8
Q ss_pred eeeHHHHHHHHHH--HH-HHHhhhcCCC------CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHh
Q 045351 58 RILYPDLTLRIKT--LA-YSLKTKYKLS------KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIH 128 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~a-~~L~~~~g~~------~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~ 128 (349)
.+++.+....... .| +.|.+..+++ +|++|+|....+.--..+...+...|+.++.+.. +.+.++ .++
T Consensus 116 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~--~~~~~~-~~~ 192 (346)
T 3fbg_A 116 NISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS--RNETIE-WTK 192 (346)
T ss_dssp SSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC--SHHHHH-HHH
T ss_pred CCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHH-HHH
Confidence 4666665432222 12 2343336787 9999999966665555555555678998777653 344444 445
Q ss_pred hcCCeEEEEc
Q 045351 129 LSKPVIAFAT 138 (349)
Q Consensus 129 ~~~~~~i~~~ 138 (349)
+.+++.++..
T Consensus 193 ~lGa~~vi~~ 202 (346)
T 3fbg_A 193 KMGADIVLNH 202 (346)
T ss_dssp HHTCSEEECT
T ss_pred hcCCcEEEEC
Confidence 5777776643
No 119
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.65 E-value=1.9e+02 Score=24.80 Aligned_cols=60 Identities=15% Similarity=-0.053 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEcCCCch------HHHHHHHHH-hcCCeEecCCCC------------CCHHHHHHHHhhcCCeEEEEcC
Q 045351 80 KLSKYDVAFLLSQNSVR------VPVLYLSLF-SLGVVVSPCNPS------------CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~i~~~------------~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
-+++||+|+|++|.+.- -+-.-...+ ..|..++.-... ...+++...+.+-++++|+|..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47889999999887742 222222223 357666542111 1234566667777889999875
No 120
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=28.65 E-value=1.4e+02 Score=25.39 Aligned_cols=69 Identities=19% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 68 IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 68 ~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+..+...++. . +++||.|++. .++.......-++...|+.++.++.. ...++++..++..++++|+...
T Consensus 84 ~~al~~~~~~-~-~~~gd~vl~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 156 (393)
T 3kgw_A 84 HCAMETALFN-L-LEPGDSFLTG-TNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVH 156 (393)
T ss_dssp TTHHHHHHHH-H-CCTTCEEEEE-ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHh-c-CCCCCEEEEE-eCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEec
No 121
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=28.52 E-value=2.2e+02 Score=24.03 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++..+.... ....-.+...|+.++.++.. ...++++..++..++++|+...
T Consensus 74 ~~~gd~vi~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFG-DRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHH-HHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcch-HHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 5788888876542211 11222334567766555432 4778888888876677777664
No 122
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=28.40 E-value=1.3e+02 Score=25.22 Aligned_cols=74 Identities=11% Similarity=-0.001 Sum_probs=46.8
Q ss_pred ceeeHHHHHHHH---HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRI---KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~---~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
..+++.+..... ....+.|+. .++++|++|+|... +.--..+...+...|+.++.+. +.+++ ..+++.+++
T Consensus 114 ~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~---~~~~~-~~~~~lGa~ 187 (315)
T 3goh_A 114 DNLSFERAAALPCPLLTAWQAFEK-IPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS---ASLSQ-ALAAKRGVR 187 (315)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTT-SCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC---SSCCH-HHHHHHTEE
T ss_pred CCCCHHHHhhCccHHHHHHHHHhh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE---ChhhH-HHHHHcCCC
Confidence 356777764322 222234444 78999999999999 6555555555566798777776 22332 334567888
Q ss_pred EEE
Q 045351 134 IAF 136 (349)
Q Consensus 134 ~i~ 136 (349)
.++
T Consensus 188 ~v~ 190 (315)
T 3goh_A 188 HLY 190 (315)
T ss_dssp EEE
T ss_pred EEE
Confidence 877
No 123
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=28.28 E-value=1.2e+02 Score=25.87 Aligned_cols=76 Identities=5% Similarity=-0.129 Sum_probs=45.2
Q ss_pred eeHHHHHHHHHH---HHHHHhhhc--CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 59 ILYPDLTLRIKT---LAYSLKTKY--KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 59 ~Ty~~l~~~~~~---~a~~L~~~~--g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
+++.+....... ..+.|.+ . ++++|++|+|...-+.-...+.+|-..-|+.++.++. +.+++ ..+++.+++
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~-~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~~-~~~~~lGa~ 218 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISR-VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDRL-ALAREVGAD 218 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHT-TGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHHH-HHHHHTTCS
T ss_pred CCHHHhhhhhhhHHHHHHHHHH-hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHH-HHHHHcCCC
Confidence 566654422221 1233444 4 7999999999987445566666665554666666643 44443 355677887
Q ss_pred EEEEc
Q 045351 134 IAFAT 138 (349)
Q Consensus 134 ~i~~~ 138 (349)
.++..
T Consensus 219 ~~i~~ 223 (345)
T 3jv7_A 219 AAVKS 223 (345)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 77643
No 124
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=28.10 E-value=1.5e+02 Score=25.40 Aligned_cols=76 Identities=7% Similarity=-0.107 Sum_probs=45.1
Q ss_pred eeeHHHHHHHHHHHH---HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKTLA---YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a---~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+.......++ +.|.+..++++|++|+|....+.--..+...+...|+.++.++. +.+.+..+ +..+.+.
T Consensus 134 ~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~-~~~g~~~ 210 (354)
T 2j8z_A 134 GLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG--SQKKLQMA-EKLGAAA 210 (354)
T ss_dssp TCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--CHHHHHHH-HHHTCSE
T ss_pred CCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHH-HHcCCcE
Confidence 467776533222222 23323368999999999986555555555555568987766543 45555444 5566665
Q ss_pred EE
Q 045351 135 AF 136 (349)
Q Consensus 135 i~ 136 (349)
++
T Consensus 211 ~~ 212 (354)
T 2j8z_A 211 GF 212 (354)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 125
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=28.02 E-value=1.5e+02 Score=25.58 Aligned_cols=61 Identities=10% Similarity=-0.087 Sum_probs=38.3
Q ss_pred HHHhhhcCCC-CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 73 YSLKTKYKLS-KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 73 ~~L~~~~g~~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.|.. .+++ +|++|+|... +.--..+...+...|+.++.+.. +.+.+....+..+++.++.
T Consensus 177 ~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~ 238 (366)
T 1yqd_A 177 SPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIST--SPSKKEEALKNFGADSFLV 238 (366)
T ss_dssp HHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES--CGGGHHHHHHTSCCSEEEE
T ss_pred HHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHhcCCceEEe
Confidence 34555 7888 9999999986 54444444444567887665543 3455555555667766653
No 126
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=28.00 E-value=1.5e+02 Score=22.60 Aligned_cols=51 Identities=16% Similarity=0.170 Sum_probs=30.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
.-+||.++.+.+.++|..+.+++. .....+.+-..++-..+...++ -.+|.
T Consensus 7 ~l~s~~~i~~~i~~La~~I~~~~~-~~~~~vvVgi~~gG~~~a~~la-~~L~~ 57 (177)
T 3ohp_A 7 VMISEQEVAQRIRELGQQITEHYQ-GSSDLVLVGLLRGSFVFMADLA-RQIHL 57 (177)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTT-TCSCEEEEEETTTTHHHHHHHH-HTCCS
T ss_pred EeeCHHHHHHHHHHHHHHHHHHcC-CCCCeEEEEECcchHHHHHHHH-HHcCC
Confidence 458999999999999999987332 1111344444444333333333 34554
No 127
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=27.98 E-value=1.8e+02 Score=24.99 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecC--CC---CCCHHHHHHHHhhcCCeEEEEc
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPC--NP---SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i--~~---~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
++++||.|++..+..... ..++...|+.++.+ ++ ....+++...++. +.++|+..
T Consensus 76 ~~~~g~~Vi~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTT---YYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 688999988776544333 33556788766554 43 2367788777754 45666653
No 128
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=27.98 E-value=1.8e+02 Score=24.69 Aligned_cols=52 Identities=12% Similarity=0.056 Sum_probs=34.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
.++||.|++..+.-..+. .++...|+.++.++ ...+++...++. ++++|+..
T Consensus 110 ~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~~ 161 (370)
T 2z61_A 110 IDDGDEVLIQNPCYPCYK---NFIRFLGAKPVFCD--FTVESLEEALSD-KTKAIIIN 161 (370)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEEE
T ss_pred cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEEc
Confidence 467888888766544433 34566788877776 677788777754 55665554
No 129
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=27.81 E-value=89 Score=26.69 Aligned_cols=56 Identities=11% Similarity=-0.029 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC--C--CCHHHHHHHHhhcCCeEEEEc
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP--S--CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~--~--~~~~~l~~~l~~~~~~~i~~~ 138 (349)
++||.|++..+....+.-....+-..|+.++.++. . ...++++..++. ++++|+..
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-CCeEEEEe
Confidence 45677666554433333333222235665544432 2 345666665543 45555544
No 130
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=27.75 E-value=1.1e+02 Score=26.65 Aligned_cols=55 Identities=9% Similarity=-0.036 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++-.+.. ....-++...|+.+++++. ...++++..++..++++|+++.
T Consensus 140 ~~~gd~Vl~~~~~~---~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFAH---MSLWEGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTSC---HHHHHHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCcC---HHHHHHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 47899888765443 3344566677888887754 5688899988877678888765
No 131
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=27.70 E-value=1.3e+02 Score=25.76 Aligned_cols=77 Identities=8% Similarity=-0.136 Sum_probs=47.5
Q ss_pred eeeHHHHHHHHHHHH---HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKTLA---YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a---~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+.......++ +.|.+..++++|++|+|....+.--..+...+...|+.++.++. +.+++. .+++.+++.
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~ 215 (353)
T 4dup_A 139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG--STGKCE-ACERLGAKR 215 (353)
T ss_dssp TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHH-HHHhcCCCE
Confidence 467777643333222 23433368999999999976665555555566678998776643 444443 445567766
Q ss_pred EEE
Q 045351 135 AFA 137 (349)
Q Consensus 135 i~~ 137 (349)
++.
T Consensus 216 ~~~ 218 (353)
T 4dup_A 216 GIN 218 (353)
T ss_dssp EEE
T ss_pred EEe
Confidence 653
No 132
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=27.64 E-value=2e+02 Score=24.28 Aligned_cols=59 Identities=7% Similarity=-0.039 Sum_probs=38.2
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
+.|.. .++++|++|+|....+.-..++.+| ...|+.++.++. +.++++. ++..+++.++
T Consensus 155 ~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~--~~~~~~~-~~~lGa~~~~ 213 (339)
T 1rjw_A 155 KALKV-TGAKPGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDI--GDEKLEL-AKELGADLVV 213 (339)
T ss_dssp HHHHH-HTCCTTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECS--CHHHHHH-HHHTTCSEEE
T ss_pred HHHHh-cCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeC--CHHHHHH-HHHCCCCEEe
Confidence 34555 6899999999998855555555555 457887766653 4454443 3556666554
No 133
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=27.22 E-value=1.5e+02 Score=25.20 Aligned_cols=56 Identities=7% Similarity=-0.103 Sum_probs=36.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
.++++|++|+|....+.--..+...+...|+.++.+.. +.+.+..+.+..+.+.++
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~--~~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG--SKEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTSCCSEEE
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHcCCceEE
Confidence 68999999999997555545555555567887665543 445555444356665554
No 134
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=26.94 E-value=1.2e+02 Score=26.52 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=35.9
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+.. .++++||.|++..+....+. .++...|+.++.++.. ...+++...++. +.++|+...
T Consensus 74 ~~~-~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 138 (418)
T 2c81_A 74 LEA-LGIGEGDEVIVPSLTWIATA---TAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVH 138 (418)
T ss_dssp HHH-TTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBC
T ss_pred HHH-cCCCCcCEEEECCCccHhHH---HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeC
Confidence 444 45688998887766544443 3455778766655432 356676666643 456666543
No 135
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=26.78 E-value=1.9e+02 Score=24.66 Aligned_cols=53 Identities=6% Similarity=-0.126 Sum_probs=34.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC--------CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS--------CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~--------~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-..+ ..++...|+.++.++.. ...++++..++. +++++..
T Consensus 111 ~~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~ 171 (391)
T 4dq6_A 111 TKANDKIMIQEPVYSPF---NSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILC 171 (391)
T ss_dssp SCTTCEEEECSSCCTHH---HHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCEEEEcCCCCHHH---HHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEE
Confidence 46788887765544333 33555678877766544 477888888876 6666554
No 136
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=26.52 E-value=2.3e+02 Score=24.02 Aligned_cols=57 Identities=16% Similarity=0.125 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-C----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-S----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
++||.|++..+....... .-++...|+.++.++. . ...++++..++..++++|+...
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 145 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTH 145 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEES
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEc
Confidence 678887766332222221 2344567876655543 2 4677888877664566666543
No 137
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=26.49 E-value=1.5e+02 Score=25.33 Aligned_cols=58 Identities=9% Similarity=-0.028 Sum_probs=32.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEe--cCCCC--CCHHHHHHHHhh-cCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVS--PCNPS--CTIPEILRQIHL-SKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v--~i~~~--~~~~~l~~~l~~-~~~~~i~~~~ 139 (349)
+++||.|++..+...... ..-.+...|+.++ +++.. ...++++..+++ -++++|+...
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 142 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCH 142 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEec
Confidence 467888777655333221 1122234566544 44332 567888888864 3567766654
No 138
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=26.48 E-value=2.3e+02 Score=24.00 Aligned_cols=54 Identities=2% Similarity=-0.040 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-------CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-------CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-------~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-.. ...++...|+.++.++.. ...+++...+ ..++++++..
T Consensus 103 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~ 163 (383)
T 3kax_A 103 TKENESVLVQPPIYPP---FFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLC 163 (383)
T ss_dssp CCTTCEEEECSSCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEE
T ss_pred CCCCCEEEEcCCCcHH---HHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEe
Confidence 4688888876554333 334566788887776542 5778888888 4466766654
No 139
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=26.29 E-value=2.5e+02 Score=23.97 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=35.5
Q ss_pred CCCCCCEEEEEcCCCch------HHHHHHHHH-hcCCeEecCCCC------------CCHHHHHHHHhhcCCeEEEEcC
Q 045351 80 KLSKYDVAFLLSQNSVR------VPVLYLSLF-SLGVVVSPCNPS------------CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~i~~~------------~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
-+++||+|+|++|.+.- -+-.-...+ ..|..++.-..- ...+++...+.+-++++|+|..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47888888888887642 222222223 356666543211 1244666667777889999975
No 140
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=26.17 E-value=2.3e+02 Score=24.89 Aligned_cols=56 Identities=14% Similarity=0.011 Sum_probs=31.1
Q ss_pred CCCCCEEEEEcCCCchHHHHH-HHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLY-LSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~-lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-......+ ..+-+.|+.++.++.. ..++++..++. +.++|+..
T Consensus 117 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~ai~~-~t~~v~le 173 (414)
T 3ndn_A 117 LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLSQWERALSV-PTQAVFFE 173 (414)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHTSS-CCSEEEEE
T ss_pred hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 577888776644332222221 1234477777666554 56677766654 45666654
No 141
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=26.08 E-value=2.1e+02 Score=25.50 Aligned_cols=90 Identities=9% Similarity=-0.114 Sum_probs=56.6
Q ss_pred CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 47 TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 47 ~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
++.+-.++.+..-||++--. ...+... .+ .| +++|...++....+=.-..+.++|.+.|..++.+-|...+.+-..
T Consensus 139 ~I~lK~E~lnptGSfKdRgA-~~~i~~A-~~-~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~ 215 (430)
T 4aec_A 139 NIAAKLEIMEPCCSVKDRIG-YSMVTDA-EQ-KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRV 215 (430)
T ss_dssp EEEEEEGGGSTTSBTTHHHH-HHHHHHH-HH-TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred eEEEEECCCCCCCCHHHHHH-HHHHHHH-HH-cCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHH
Confidence 45554443334446655321 2222333 33 45 577755555555677777777888889987666655555666677
Q ss_pred HHhhcCCeEEEEcC
Q 045351 126 QIHLSKPVIAFATH 139 (349)
Q Consensus 126 ~l~~~~~~~i~~~~ 139 (349)
.++..++++++++.
T Consensus 216 ~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 216 LLKAFGAELVLTDP 229 (430)
T ss_dssp HHHHTTCEEEEECG
T ss_pred HHHHCCCEEEEECC
Confidence 88999999999974
No 142
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=26.08 E-value=1.4e+02 Score=25.45 Aligned_cols=57 Identities=7% Similarity=0.028 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHH-HHhcCCeEecCCCC------CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLS-LFSLGVVVSPCNPS------CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~i~~~------~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-..+...+.. +...|+.++.++.. ...+.+...++. ++++|+..
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEe
Confidence 46677777665544444333322 23456655544332 234455544432 44555544
No 143
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=26.05 E-value=1.1e+02 Score=26.04 Aligned_cols=78 Identities=8% Similarity=0.014 Sum_probs=47.3
Q ss_pred ceeeHHHHHHHHHHHH---HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCe
Q 045351 57 HRILYPDLTLRIKTLA---YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a---~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
..+++.+.......++ +.|.+..++++|++|+|....+.--..+...+...|+.++.+.. +.+++ ..++..+++
T Consensus 130 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~-~~~~~~ga~ 206 (342)
T 4eye_A 130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN--RTAAT-EFVKSVGAD 206 (342)
T ss_dssp TTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SGGGH-HHHHHHTCS
T ss_pred CCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHH-HHHHhcCCc
Confidence 3567777644333322 33423368999999999998665555555556678987776654 23333 344456666
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 207 ~v~~ 210 (342)
T 4eye_A 207 IVLP 210 (342)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6653
No 144
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=25.92 E-value=2.6e+02 Score=23.64 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=34.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C--CCCHHHHHHHHhhcCCeEEEEcC
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P--SCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~--~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
++||.|++..+.-..+. .++...|+.++.++ . ....+++...++..++++|+...
T Consensus 114 ~~gd~Vl~~~~~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (369)
T 3cq5_A 114 GPGRTALGFQPSYSMHP---ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTT 172 (369)
T ss_dssp STTCEEEEEESSCTHHH---HHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred CCCCEEEEcCCChHHHH---HHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 67888888766544433 34566787655543 3 34677888877764677777643
No 145
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=25.77 E-value=2.4e+02 Score=24.13 Aligned_cols=91 Identities=9% Similarity=-0.180 Sum_probs=54.4
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEI 123 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l 123 (349)
+.++.+-.+..+..-||++--.. ..+.. +.+ .| +++|+.|+.... +-.-..+.++|.+.|..++.+-|...+..-
T Consensus 41 g~~v~~K~E~~~ptGSfKdR~a~-~~l~~-a~~-~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k 116 (343)
T 2pqm_A 41 GTRILVKLEYFNPMSSVKDRVGF-NIVYQ-AIK-DGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVER 116 (343)
T ss_dssp TCEEEEEEGGGSTTSBTHHHHHH-HHHHH-HHH-HTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHH
T ss_pred CcEEEEEeccCCCCCChHHHHHH-HHHHH-HHH-cCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHH
Confidence 34555545433455666654222 22333 333 34 467776665543 555556667777889866555444445556
Q ss_pred HHHHhhcCCeEEEEcC
Q 045351 124 LRQIHLSKPVIAFATH 139 (349)
Q Consensus 124 ~~~l~~~~~~~i~~~~ 139 (349)
...++..++++++++.
T Consensus 117 ~~~~~~~GA~V~~~~~ 132 (343)
T 2pqm_A 117 QMIMKAFGAELILTEG 132 (343)
T ss_dssp HHHHHHTTCEEEEECG
T ss_pred HHHHHHCCCEEEEECC
Confidence 6778889999999875
No 146
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=25.73 E-value=2.2e+02 Score=24.38 Aligned_cols=54 Identities=4% Similarity=0.023 Sum_probs=34.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-------CCHHHHHHHHhhcCCeEEEEc
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-------CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-------~~~~~l~~~l~~~~~~~i~~~ 138 (349)
++||.|++..+.-..+ ..++...|+.++.++.. ...+++...++..++++|+..
T Consensus 111 ~~gd~vl~~~p~~~~~---~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~ 171 (399)
T 1c7n_A 111 KPGDGVIIITPVYYPF---FMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFC 171 (399)
T ss_dssp CTTCEEEECSSCCTHH---HHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEE
T ss_pred CCCCEEEEcCCCcHhH---HHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEc
Confidence 5788887765543333 33455678877666542 567888888865566776654
No 147
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=25.53 E-value=2.6e+02 Score=23.35 Aligned_cols=77 Identities=8% Similarity=0.029 Sum_probs=46.3
Q ss_pred eeeHHHHHHH---HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLR---IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~---~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+.... .......+.+..++++|++|+|....+.--..+...+...|+.++.+.. +.++++ .+++.+.+.
T Consensus 112 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~Ga~~ 188 (325)
T 3jyn_A 112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS--SPEKAA-HAKALGAWE 188 (325)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES--SHHHHH-HHHHHTCSE
T ss_pred CCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCCE
Confidence 4677665422 2222334444358999999999986555555555555567987776643 445544 344567766
Q ss_pred EEE
Q 045351 135 AFA 137 (349)
Q Consensus 135 i~~ 137 (349)
++.
T Consensus 189 ~~~ 191 (325)
T 3jyn_A 189 TID 191 (325)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 148
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=25.40 E-value=1.2e+02 Score=24.99 Aligned_cols=40 Identities=15% Similarity=0.308 Sum_probs=30.0
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCch-HHHHHHHHHhcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVR-VPVLYLSLFSLGV 109 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~ 109 (349)
..++..+.+ +|+.+++.|+++|..+.. ...+.+.+...|.
T Consensus 72 ~~~~~~~~~-~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~ 112 (280)
T 1urh_A 72 ETFAVAMRE-LGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGV 112 (280)
T ss_dssp HHHHHHHHH-TTCCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCccHHHHHHHHHHcCC
Confidence 566777777 889999999999987665 5556666666775
No 149
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=25.29 E-value=1.2e+02 Score=24.85 Aligned_cols=40 Identities=10% Similarity=-0.018 Sum_probs=30.2
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCc-hHHHHHHHHHhcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSV-RVPVLYLSLFSLGV 109 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~ 109 (349)
..++..+.+ +|+.+++.|++++..+. ....+.+.+...|.
T Consensus 67 ~~~~~~~~~-~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~ 107 (271)
T 1e0c_A 67 EQLESLFGE-LGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107 (271)
T ss_dssp HHHHHHHHH-HTCCTTCEEEEECSSSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-cCCCCCCeEEEEcCCCCccHHHHHHHHHHcCC
Confidence 467777887 89999999999998775 55555556666775
No 150
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=25.22 E-value=1.5e+02 Score=23.81 Aligned_cols=49 Identities=10% Similarity=0.033 Sum_probs=34.2
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHH
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSL 104 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 104 (349)
..-+|+.++.+++.++|..+.++++-...+.|.+...++-..+...++-
T Consensus 33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~ 81 (230)
T 1dqn_A 33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTV 81 (230)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHT
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHH
Confidence 4689999999999999999986343110345666667776666655543
No 151
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=25.15 E-value=1.7e+02 Score=24.79 Aligned_cols=77 Identities=12% Similarity=-0.035 Sum_probs=44.6
Q ss_pred ceeeHHHHHH---HHHHHHHHHhhhcCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCC
Q 045351 57 HRILYPDLTL---RIKTLAYSLKTKYKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKP 132 (349)
Q Consensus 57 ~~~Ty~~l~~---~~~~~a~~L~~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 132 (349)
..+++.+... ........+.++.++++|++|+|....+ .-..++.+| ...|+.++.++... +++. .+++.++
T Consensus 115 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~--~~~~-~~~~lga 190 (340)
T 3gms_A 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNN--KHTE-ELLRLGA 190 (340)
T ss_dssp TTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSS--TTHH-HHHHHTC
T ss_pred CCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCH--HHHH-HHHhCCC
Confidence 3567776542 2222233443337899999999998874 555555444 56788777665432 2222 3344566
Q ss_pred eEEEE
Q 045351 133 VIAFA 137 (349)
Q Consensus 133 ~~i~~ 137 (349)
+.++.
T Consensus 191 ~~~~~ 195 (340)
T 3gms_A 191 AYVID 195 (340)
T ss_dssp SEEEE
T ss_pred cEEEe
Confidence 66653
No 152
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=24.96 E-value=1.7e+02 Score=23.74 Aligned_cols=70 Identities=4% Similarity=-0.195 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcC----CeEecCCCCCC--HHHHHHHHhhcCCeEEEEc
Q 045351 65 TLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLG----VVVSPCNPSCT--IPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 65 ~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G----~~~v~i~~~~~--~~~l~~~l~~~~~~~i~~~ 138 (349)
....+++..+|++ + .++.|++...-+.+..++..-+.+.+ ...+-++...+ .+..+.+.+..+....+.+
T Consensus 7 ~~~~~~l~~~i~~-~---~~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 82 (257)
T 2e18_A 7 DKVIERILEFIRE-K---GNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVIN 82 (257)
T ss_dssp HHHHHHHHHHHHH-H---CTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHHH-h---CCCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCchHHHHHHHHHHHhCCCEEEEE
Confidence 3445567777887 5 35668888888999877766665553 23444443332 3344555667777766654
No 153
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=24.88 E-value=2.4e+02 Score=24.01 Aligned_cols=76 Identities=7% Similarity=-0.120 Sum_probs=45.2
Q ss_pred eeeHHHHHHHHHH--HH-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKT--LA-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+....... .| +.|.+..++++|++|+|....+.--..+...+...|+.++.+.. +.+.+. .++..+.+.
T Consensus 142 ~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~ 218 (351)
T 1yb5_A 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG--TEEGQK-IVLQNGAHE 218 (351)
T ss_dssp TSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSE
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--ChhHHH-HHHHcCCCE
Confidence 4677664322222 22 23433268999999999998665555555555678987666543 344444 445566655
Q ss_pred EE
Q 045351 135 AF 136 (349)
Q Consensus 135 i~ 136 (349)
++
T Consensus 219 ~~ 220 (351)
T 1yb5_A 219 VF 220 (351)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 154
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=24.62 E-value=2.7e+02 Score=24.29 Aligned_cols=54 Identities=11% Similarity=-0.078 Sum_probs=35.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
++++|++|+|... +.--..+...+...|+ .++.++. +.+.+ .++++.+++.++.
T Consensus 210 ~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 210 GIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEP--SEVRR-NLAKELGADHVID 264 (404)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS--CHHHH-HHHHHHTCSEEEC
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC--CHHHH-HHHHHcCCCEEEc
Confidence 7999999999987 5444444444556898 6666643 34443 4556778877764
No 155
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=24.62 E-value=1.2e+02 Score=22.05 Aligned_cols=50 Identities=14% Similarity=0.006 Sum_probs=31.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 84 YDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 84 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
-|.|.++.| .....-.+..|...|...+.+.+....+++....++.+..+
T Consensus 70 vDlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~~ 119 (138)
T 1y81_A 70 VDVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVEY 119 (138)
T ss_dssp CCEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCEE
T ss_pred CCEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCEE
Confidence 366777766 34444445566667776666666656677777777776653
No 156
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=24.62 E-value=1e+02 Score=23.71 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=20.8
Q ss_pred CceeeHHHHHHHHHHHHHHHhhhc
Q 045351 56 RHRILYPDLTLRIKTLAYSLKTKY 79 (349)
Q Consensus 56 ~~~~Ty~~l~~~~~~~a~~L~~~~ 79 (349)
..-+||.++.+++.++|..+.+++
T Consensus 11 ~~li~~~~i~~~i~~La~~I~~~~ 34 (181)
T 2ywu_A 11 PVQISAEAIKKRVEELGGEIARDY 34 (181)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHT
T ss_pred cEEECHHHHHHHHHHHHHHHHHHc
Confidence 357999999999999999998733
No 157
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=24.59 E-value=1.8e+02 Score=24.93 Aligned_cols=59 Identities=8% Similarity=0.126 Sum_probs=36.9
Q ss_pred HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C---CCCHHHHHHHHhhcCCeEEEE
Q 045351 74 SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P---SCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~---~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.++. +++++||.|++..+....+. .++...|+.++.++ + ....+++...++. +.++|+.
T Consensus 69 ~l~~-l~~~~gd~Vi~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 132 (388)
T 1b9h_A 69 ALQV-MGVGPGTEVIVPAFTFISSS---QAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMP 132 (388)
T ss_dssp HHHH-TTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred HHHH-cCCCCcCEEEECCCccHHHH---HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3444 45788999888766554443 35567888665554 3 2467788777743 4566663
No 158
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=24.49 E-value=1.8e+02 Score=25.13 Aligned_cols=76 Identities=4% Similarity=-0.164 Sum_probs=44.4
Q ss_pred eeeHHHHHHHH--HHHHH-HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCe
Q 045351 58 RILYPDLTLRI--KTLAY-SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 58 ~~Ty~~l~~~~--~~~a~-~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
.+++.+..... ...|. .+.++.++++|++|+|... +.--..+...+...|+ .++.++..- ++++ ++++.+++
T Consensus 165 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~--~~~~-~a~~lGa~ 240 (378)
T 3uko_A 165 TAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDS--KKYE-TAKKFGVN 240 (378)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCT--THHH-HHHTTTCC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH--HHHH-HHHHcCCc
Confidence 45666644332 12222 2333378999999999987 5544555555556788 566665433 3333 45667777
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 241 ~vi~ 244 (378)
T 3uko_A 241 EFVN 244 (378)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7663
No 159
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=24.40 E-value=1.6e+02 Score=25.43 Aligned_cols=58 Identities=12% Similarity=0.025 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHH-HHHhcCCeEecCCC--C--CCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYL-SLFSLGVVVSPCNP--S--CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~l-A~~~~G~~~v~i~~--~--~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++..+........+. ++...|+.++.++. . ...+++...++. ++++|+...
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 177 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVVH 177 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEES
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEeC
Confidence 5677777766554444322222 23345665544432 2 356666666643 455655543
No 160
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=24.33 E-value=2.8e+02 Score=23.28 Aligned_cols=93 Identities=6% Similarity=-0.118 Sum_probs=55.3
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEI 123 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l 123 (349)
+.++.+-.++.+..-||++--.. ..+... .+ .| +++|+..++....+=.-..+.++|.+.|..++.+-|...+..-
T Consensus 29 g~~v~~K~E~~~ptGSfK~R~a~-~~l~~a-~~-~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k 105 (322)
T 1z7w_A 29 VGRVAAKLEMMEPCSSVKDRIGF-SMISDA-EK-KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTER 105 (322)
T ss_dssp SSEEEEEEGGGSTTSBTHHHHHH-HHHHHH-HH-TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHH
T ss_pred CceEEEEecccCCCCchHHHHHH-HHHHHH-HH-cCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHH
Confidence 34566644433445556653221 223333 33 45 5667534444555666667777788999876665554445556
Q ss_pred HHHHhhcCCeEEEEcCc
Q 045351 124 LRQIHLSKPVIAFATHD 140 (349)
Q Consensus 124 ~~~l~~~~~~~i~~~~~ 140 (349)
...++..++++++++..
T Consensus 106 ~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 106 RIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHHHHHTTCEEEEECGG
T ss_pred HHHHHHcCCEEEEeCCC
Confidence 67888999999998753
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=24.32 E-value=3.3e+02 Score=23.45 Aligned_cols=55 Identities=9% Similarity=-0.087 Sum_probs=35.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-----CCCHHHHHHHHhhc---CCe-EEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-----SCTIPEILRQIHLS---KPV-IAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~---~~~-~i~~~ 138 (349)
+++||.|++..|.-..+. -++...|+.++.++. ....+.+...++.. +.+ +++..
T Consensus 122 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 185 (413)
T 3t18_A 122 LDEGDPLICHDYYWAPYR---KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLIN 185 (413)
T ss_dssp CCSSCEEEEESSCCTHHH---HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCcccHH---HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 468999988876444433 344567777666653 45678888888763 555 45443
No 162
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=24.30 E-value=1.7e+02 Score=25.41 Aligned_cols=56 Identities=13% Similarity=-0.044 Sum_probs=35.1
Q ss_pred HHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 74 SLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.|.. .++++|++|+|... +.--..+...+...|+ .++.++. +.+.++ .+++.+++.
T Consensus 177 al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~--~~~~~~-~a~~lGa~~ 233 (398)
T 1kol_A 177 GAVT-AGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL--NPARLA-HAKAQGFEI 233 (398)
T ss_dssp HHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES--CHHHHH-HHHHTTCEE
T ss_pred HHHH-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcC--CHHHHH-HHHHcCCcE
Confidence 3444 78999999999885 5544444444556788 4555533 444444 446778773
No 163
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=24.30 E-value=77 Score=23.20 Aligned_cols=40 Identities=10% Similarity=-0.037 Sum_probs=22.9
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
.++...|.+ .|+.+++.|+++|..+.....+...+...|.
T Consensus 66 ~~l~~~l~~-~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~ 105 (148)
T 2fsx_A 66 AELRDRIPA-DADQHERPVIFLCRSGNRSIGAAEVATEAGI 105 (148)
T ss_dssp HHHHHHCC--------CCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred HHHHHHHhh-ccCCCCCEEEEEcCCChhHHHHHHHHHHcCC
Confidence 445555665 6778888888888887776666666666665
No 164
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=24.27 E-value=2.3e+02 Score=24.25 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 68 IKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 68 ~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+..+...+.. . +++||.|++..+...... ..-++...|+.++.++.. ...+++...++..++++|+...
T Consensus 74 t~al~~~~~~-~-~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 146 (411)
T 3nnk_A 74 RAGIEAILVS-A-IRPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQ 146 (411)
T ss_dssp HHHHHHHHHH-H-CCTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHH-h-cCCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeC
No 165
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=24.16 E-value=3.2e+02 Score=23.01 Aligned_cols=55 Identities=0% Similarity=-0.248 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC--C--CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP--S--CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~--~--~~~~~l~~~l~~~~~~~i~~~ 138 (349)
..+||.|++..+....+. -++...|+.++.++. . ...++++..++..++++++..
T Consensus 120 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 178 (397)
T 3f9t_A 120 KNEHPKIIVPITAHFSFE---KGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGI 178 (397)
T ss_dssp CCSSCEEEEETTCCTHHH---HHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEE
T ss_pred CCCCeEEEECCcchhHHH---HHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEE
Confidence 346888887766544432 334445765554433 2 367888888877455555543
No 166
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=24.15 E-value=2e+02 Score=24.41 Aligned_cols=73 Identities=7% Similarity=-0.059 Sum_probs=45.4
Q ss_pred eeeHHHHHHHHHH--HH-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKT--LA-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~--~a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+....... .| +.|.++.++++|++|+|....+.--..+...+...|+.++.+ .+.++++ .+++.+++.
T Consensus 122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~---~~~~~~~-~~~~lGa~~ 197 (343)
T 3gaz_A 122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT---ARGSDLE-YVRDLGATP 197 (343)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE---ECHHHHH-HHHHHTSEE
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE---eCHHHHH-HHHHcCCCE
Confidence 4677665433222 22 234233789999999999965655555555556789877665 3455544 456677776
No 167
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=24.09 E-value=2.2e+02 Score=23.99 Aligned_cols=55 Identities=11% Similarity=-0.087 Sum_probs=36.4
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
.++++|++|+|....+.--..+...+...|+.++.++. +.+.+... +..+.+.++
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~--~~~~~~~~-~~~g~~~~~ 195 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG--SDEKIAYL-KQIGFDAAF 195 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHHHH-HHTTCSEEE
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC--CHHHHHHH-HhcCCcEEE
Confidence 68999999999998555555555555668887776643 45555544 555655443
No 168
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=24.05 E-value=1.2e+02 Score=27.01 Aligned_cols=51 Identities=14% Similarity=0.059 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhh-hcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecC
Q 045351 64 LTLRIKTLAYSLKT-KYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPC 114 (349)
Q Consensus 64 l~~~~~~~a~~L~~-~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i 114 (349)
+..+..++|..+.+ ..++++|+.|+|..+.... .-.+.-++..+|+.++.+
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v 57 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV 57 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEE
Confidence 45677888888765 2468999999999985533 234455788899987754
No 169
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=23.96 E-value=1.1e+02 Score=22.32 Aligned_cols=49 Identities=12% Similarity=-0.040 Sum_probs=27.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 85 DVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 85 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
|.|.|+.|. ....-++-.|...|+..+.+.+....+++....++.+..+
T Consensus 79 Dlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~v 127 (144)
T 2d59_A 79 EVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLII 127 (144)
T ss_dssp SEEEECSCH-HHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEE
T ss_pred CEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEE
Confidence 455555544 3333444456666665555656666666666666666653
No 170
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=23.71 E-value=1.8e+02 Score=24.56 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=37.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecC--CC--CCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPC--NP--SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i--~~--~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-..+. .++...|+.++.+ ++ ....+++...++..++++|+..
T Consensus 106 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYA---MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSC---HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHH---HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 578999988876554433 2355678765554 33 3578889888887677777764
No 171
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.66 E-value=1.7e+02 Score=23.86 Aligned_cols=90 Identities=14% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCCcEEEEecCh-hhHhhH-HHHHhhhhcCCEEEEc-CCCCHHHHHHHHHhhcccEEEech------HHHHHHHhcCCCC
Q 045351 226 SRPAVVLCTVPY-FHSYGF-TCCLRSLGMGESLVCM-GKFDFGRMLKAVEEFRVSHVVLAP------PVVLKMARDGGTM 296 (349)
Q Consensus 226 ~~~~~~l~~~p~-~~~~g~-~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~l~~~P------~~l~~l~~~~~~~ 296 (349)
....+++.+.+- .|..|. .....--..|..++.. ....++.+.+.+.+++++.+.++- ..+..+++.. ..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l-~~ 200 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDML-LE 200 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHH-HT
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHH-Hh
Q ss_pred CCCCCcchheehccCCCCCHHHHH
Q 045351 297 DGYDLSSIEVVASGGAHLTLSVIR 320 (349)
Q Consensus 297 ~~~~l~~lr~i~~gG~~l~~~~~~ 320 (349)
...+ -.+++||...+++..+
T Consensus 201 ~~~~----~~v~vGG~~~~~~~~~ 220 (258)
T 2i2x_B 201 NGIK----IPFACGGGAVNQDFVS 220 (258)
T ss_dssp TTCC----CCEEEESTTCCHHHHH
T ss_pred cCCC----CcEEEECccCCHHHHH
No 172
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=23.46 E-value=2.6e+02 Score=21.70 Aligned_cols=88 Identities=20% Similarity=0.244 Sum_probs=52.4
Q ss_pred cEEEEecCh-hhHhhHHHHH-hhhhcCCEEEEcC-CCCHHHHHHHHHhhcccEEEech------HHHHHHHhcCCCCCCC
Q 045351 229 AVVLCTVPY-FHSYGFTCCL-RSLGMGESLVCMG-KFDFGRMLKAVEEFRVSHVVLAP------PVVLKMARDGGTMDGY 299 (349)
Q Consensus 229 ~~~l~~~p~-~~~~g~~~~~-~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P------~~l~~l~~~~~~~~~~ 299 (349)
.+++.+.+- .|..|...+- .--..|..++... ...++.+.+.+++++++.+..+- ..+..+++.. .....
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l-~~~~~ 168 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDAL-IAAGL 168 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHH-HHTTC
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHH-HhcCC
Confidence 344444442 6888884333 3335677777664 56889999999999998876542 2344444332 11111
Q ss_pred CCcchheehccCCCCCHHHH
Q 045351 300 DLSSIEVVASGGAHLTLSVI 319 (349)
Q Consensus 300 ~l~~lr~i~~gG~~l~~~~~ 319 (349)
.+.+ .+++||...+++..
T Consensus 169 -~~~~-~v~vGG~~~~~~~~ 186 (210)
T 1y80_A 169 -RDRV-KVIVGGAPLSQDFA 186 (210)
T ss_dssp -GGGC-EEEEESTTCCHHHH
T ss_pred -CCCC-eEEEECCCCCHHHH
Confidence 1233 36778888886554
No 173
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=23.34 E-value=95 Score=26.57 Aligned_cols=62 Identities=21% Similarity=0.151 Sum_probs=36.9
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
..+.. .++++||.|++..+...... .++...|+.++.++.. ...+++...++. ++++|+...
T Consensus 66 ~~l~~-l~~~~gd~Vi~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n 132 (373)
T 3frk_A 66 LILKG-YDIGFGDEVIVPSNTFIATA---LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAVH 132 (373)
T ss_dssp HHHHH-TTCCTTCEEEEETTSCTHHH---HHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEEEC
T ss_pred HHHHH-cCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEEEC
Confidence 34455 56788998888766554433 3456678776655432 155666666544 566666544
No 174
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=23.28 E-value=39 Score=29.58 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=28.8
Q ss_pred heehccCCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 305 EVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 305 r~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
+.++|||+.-++.+++.+++.+|...+.-..++|.
T Consensus 286 ~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi 320 (371)
T 3qbx_A 286 EVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGI 320 (371)
T ss_dssp EEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTC
T ss_pred eEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCC
Confidence 67889999999999999999998666555566663
No 175
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=23.25 E-value=1.7e+02 Score=25.01 Aligned_cols=74 Identities=8% Similarity=0.135 Sum_probs=42.9
Q ss_pred eeeHHHHHHHHHHH--H-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCe
Q 045351 58 RILYPDLTLRIKTL--A-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPV 133 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~--a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~ 133 (349)
.+++.+..- ..-+ | +.|.. .++++|++|+|...-+.-...+.+| ...|+ .++.++. +.+++ ..++..+++
T Consensus 145 ~l~~~~aa~-~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~ 218 (356)
T 1pl8_A 145 NVTFEEGAL-IEPLSVGIHACRR-GGVTLGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDL--SATRL-SKAKEIGAD 218 (356)
T ss_dssp TSCHHHHHH-HHHHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEES--CHHHH-HHHHHTTCS
T ss_pred CCCHHHHHh-hchHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECC--CHHHH-HHHHHhCCC
Confidence 467766432 1222 2 33444 7899999999998633444444444 45788 6665543 34443 344567777
Q ss_pred EEEE
Q 045351 134 IAFA 137 (349)
Q Consensus 134 ~i~~ 137 (349)
.++.
T Consensus 219 ~vi~ 222 (356)
T 1pl8_A 219 LVLQ 222 (356)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 176
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=23.17 E-value=1.7e+02 Score=25.29 Aligned_cols=60 Identities=8% Similarity=-0.088 Sum_probs=38.1
Q ss_pred HHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 73 YSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 73 ~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.|.. .+ +++|++|+|.. .+.--..+...+...|+ .++.+.. +.+.++ .+++.+++.++.
T Consensus 185 ~al~~-~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~-~~~~lGa~~vi~ 246 (380)
T 1vj0_A 185 HAFDE-YPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG--SPNRLK-LAEEIGADLTLN 246 (380)
T ss_dssp HHHHT-CSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES--CHHHHH-HHHHTTCSEEEE
T ss_pred HHHHh-cCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC--CHHHHH-HHHHcCCcEEEe
Confidence 34454 78 99999999999 56555555555556784 6665543 344443 445677777664
No 177
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=23.08 E-value=2.3e+02 Score=24.63 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHH-HHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYL-SLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~l-A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+.-..+...+- ++...|+.++.++.. ..+++...++. +.++|+..
T Consensus 98 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~t~~v~l~ 154 (404)
T 1e5e_A 98 LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-IPGEVKKHMKP-NTKIVYFE 154 (404)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-STTHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCC-CCcEEEEE
Confidence 4678887776554433333221 355677777666544 45566666543 45666554
No 178
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=23.07 E-value=2.8e+02 Score=24.93 Aligned_cols=69 Identities=10% Similarity=-0.022 Sum_probs=49.5
Q ss_pred HHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHh----cC--CeEecCCCCCC-H------HHHHHHHhhcCCeEE
Q 045351 70 TLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFS----LG--VVVSPCNPSCT-I------PEILRQIHLSKPVIA 135 (349)
Q Consensus 70 ~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~----~G--~~~v~i~~~~~-~------~~l~~~l~~~~~~~i 135 (349)
++.+.+.+ ++ +.++++|+|...-+.+..+++..+.. .| ..++-++.... . +.++.+.+..+..+.
T Consensus 4 kv~~~i~~-~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~ 82 (464)
T 3a2k_A 4 KVRAFIHR-HQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCE 82 (464)
T ss_dssp HHHHHHHH-TCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHH-cCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEE
Confidence 45566776 55 68899999999999999988887776 34 45666676664 2 244566777888887
Q ss_pred EEcC
Q 045351 136 FATH 139 (349)
Q Consensus 136 ~~~~ 139 (349)
+.+-
T Consensus 83 v~~~ 86 (464)
T 3a2k_A 83 TAQI 86 (464)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7654
No 179
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=22.97 E-value=1.3e+02 Score=25.00 Aligned_cols=83 Identities=6% Similarity=0.009 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH---HHhhcCCeEEE
Q 045351 61 YPDLTLRIKTLAYSLKTKY-KLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR---QIHLSKPVIAF 136 (349)
Q Consensus 61 y~~l~~~~~~~a~~L~~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~---~l~~~~~~~i~ 136 (349)
++++.++..++-..+++++ .+.++.++++..++...++.-.+++-..|..-+.-...-++.++.. .+++.+.++||
T Consensus 138 ~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 217 (282)
T 3mfq_A 138 TEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIF 217 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3444455555555554422 2444667888888888888777666555432111112235565555 46678999999
Q ss_pred EcCcccc
Q 045351 137 ATHDTAH 143 (349)
Q Consensus 137 ~~~~~~~ 143 (349)
++.....
T Consensus 218 ~e~~~~~ 224 (282)
T 3mfq_A 218 TESTTNP 224 (282)
T ss_dssp CBTTSCT
T ss_pred EeCCCCh
Confidence 9865433
No 180
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=22.91 E-value=2.6e+02 Score=23.74 Aligned_cols=57 Identities=21% Similarity=0.139 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C--CCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P--SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~--~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+..... ...-.+-..|+.++.++ . ....+++...++..++++|+..
T Consensus 91 ~~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 151 (393)
T 2huf_A 91 LEDGDVILIGHTGHWGD-RSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLT 151 (393)
T ss_dssp CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred hCCCCEEEEECCCcchH-HHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEE
Confidence 35778777765533222 11112334676554443 2 2567778777765456666654
No 181
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=22.73 E-value=2e+02 Score=25.13 Aligned_cols=55 Identities=18% Similarity=0.119 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHH-HHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLS-LFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+........+.. +-..|+.+..++.+ .++++..++. +.++|++.
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~i~~-~~~~v~~~ 147 (412)
T 2cb1_A 92 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE--PEAVREALSA-KTRAVFVE 147 (412)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS--HHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--HHHHHHHhcc-CCeEEEEe
Confidence 57888888776544333332222 34567777766554 6777776653 55666664
No 182
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=22.55 E-value=40 Score=29.53 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=29.0
Q ss_pred heehccCCCCCHHHHHHHHHHcCCcccccccccCc
Q 045351 305 EVVASGGAHLTLSVIRKYLQLNRTVNRQLCLEFGA 339 (349)
Q Consensus 305 r~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~G~ 339 (349)
+.++|||+.-++.+++.+++.+|...+.-..++|.
T Consensus 292 ~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi 326 (370)
T 3cqy_A 292 ELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGV 326 (370)
T ss_dssp EEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTC
T ss_pred EEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCC
Confidence 78999999999999999999998765555566663
No 183
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=22.55 E-value=2.7e+02 Score=23.69 Aligned_cols=56 Identities=14% Similarity=0.048 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C--CCCHHHHHHHHhhcCCeEEEEc
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P--SCTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~--~~~~~~l~~~l~~~~~~~i~~~ 138 (349)
++||.|++..+.-.. ....-++...|+.++.++ . ....++++..++..++++|+..
T Consensus 107 ~~gd~Vl~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 166 (393)
T 1vjo_A 107 EPGDVVLIGVAGYFG-NRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALV 166 (393)
T ss_dssp CTTCEEEEEESSHHH-HHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCEEEEEcCChhH-HHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEe
Confidence 466766665442221 112333455676554443 2 2566777777765355666554
No 184
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=22.44 E-value=1.8e+02 Score=22.47 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=30.2
Q ss_pred ceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCC
Q 045351 57 HRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV 109 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 109 (349)
.-+|+.++.+.+.++|+.+.+++.- ...+++...++-..+...+ +-.+|.
T Consensus 11 ~l~~~~~i~~~i~~La~~I~~~~~~--~~~vvVgi~~gG~~~a~~l-a~~L~~ 60 (186)
T 3o7m_A 11 TLISEEQLQEKVKELALQIERDFEG--EEIVVIAVLKGSFVFAADL-IRHIKN 60 (186)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTT--SCEEEEEETTTTHHHHHHH-HTTCCS
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCC--CCCEEEEECcchHHHHHHH-HHHhCC
Confidence 4589999999999999999873321 2334444344433333333 334554
No 185
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=22.34 E-value=2.4e+02 Score=24.12 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC--C-----CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP--S-----CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~--~-----~~~~~l~~~l~~~~~~~i~~~ 138 (349)
.++||.|++..+.-..+ ..++...|+.++.++. . ...+++...++..++++|+..
T Consensus 108 ~~~gd~vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~ 169 (390)
T 1d2f_A 108 SETGEGVVIHTPAYDAF---YKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLC 169 (390)
T ss_dssp SCTTCEEEEEESCCHHH---HHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEE
T ss_pred cCCCCEEEEcCCCcHHH---HHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEe
Confidence 36788888876643333 3345567876655532 2 577888888875567776653
No 186
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=22.27 E-value=4e+02 Score=23.72 Aligned_cols=96 Identities=8% Similarity=-0.083 Sum_probs=59.2
Q ss_pred CCeEEEeCCCCc-eeeHHHH--HHHHHHHHHHHhhhcC-CCCCC----------------EEEEEcCCCchHHHHHHHHH
Q 045351 46 DTTALIDTASRH-RILYPDL--TLRIKTLAYSLKTKYK-LSKYD----------------VAFLLSQNSVRVPVLYLSLF 105 (349)
Q Consensus 46 ~~~ai~~~~~~~-~~Ty~~l--~~~~~~~a~~L~~~~g-~~~gd----------------~V~i~~~n~~~~~~~~lA~~ 105 (349)
.++.+-.+..+. .=||++- ...+.+++..+..+.| +.+|+ +..+....+=.-..+-+++.
T Consensus 101 ~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa 180 (442)
T 3ss7_X 101 GQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA 180 (442)
T ss_dssp SEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHH
Confidence 456665553344 5677763 3344455444322256 45555 34455555666667777788
Q ss_pred hcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCcc
Q 045351 106 SLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHDT 141 (349)
Q Consensus 106 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~~ 141 (349)
++|..++.+-|...+.+-...++..++.+++++...
T Consensus 181 ~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~ 216 (442)
T 3ss7_X 181 RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDY 216 (442)
T ss_dssp HHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCH
T ss_pred HhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 889866655455555556777889999999998754
No 187
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=22.26 E-value=1.2e+02 Score=24.73 Aligned_cols=52 Identities=15% Similarity=0.083 Sum_probs=38.0
Q ss_pred eeeHHHHHHHH------HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCe
Q 045351 58 RILYPDLTLRI------KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVV 110 (349)
Q Consensus 58 ~~Ty~~l~~~~------~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 110 (349)
.+.+.++.+.. .++...+.+ .++.+++.|+++|..+.....+..++..+|..
T Consensus 192 ~ip~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~ 249 (271)
T 1e0c_A 192 NFEWTAAMDPSRALRIRTDIAGRLEE-LGITPDKEIVTHCQTHHRSGLTYLIAKALGYP 249 (271)
T ss_dssp ECCGGGGEEGGGTTEECTTHHHHHHH-TTCCTTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred eccHHHhCCCCCCCCCHHHHHHHHHH-cCCCCCCCEEEECCchHHHHHHHHHHHHcCCC
Confidence 45566554321 344555666 78999999999999998888888888888863
No 188
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=22.12 E-value=2.3e+02 Score=24.36 Aligned_cols=60 Identities=13% Similarity=0.182 Sum_probs=36.6
Q ss_pred HhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCC--C---CCCHHHHHHHHhhcCCeEEEEcC
Q 045351 75 LKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCN--P---SCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 75 L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~--~---~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
++. .++++||.|++..+.-.. ..-++...|+.++.++ + ....+++...++. ++++|+.+.
T Consensus 95 l~~-~~~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n 159 (399)
T 2oga_A 95 LRG-LGIGPGDEVIVPSHTYIA---SWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPVH 159 (399)
T ss_dssp HHH-TTCCTTCEEEEESSSCTH---HHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCBC
T ss_pred HHH-hCCCCcCEEEECCCccHH---HHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEeC
Confidence 444 456889998887664444 3334556787665543 3 3467777777754 566766543
No 189
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=22.10 E-value=2.1e+02 Score=24.61 Aligned_cols=53 Identities=4% Similarity=-0.147 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+++|++|+|....+.--..+...+...|+.++.+. +.++++ .++..+++.++.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~---~~~~~~-~~~~lGa~~v~~ 233 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC---SQDASE-LVRKLGADDVID 233 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE---CGGGHH-HHHHTTCSEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe---ChHHHH-HHHHcCCCEEEE
Confidence 89999999998655444444444456788766554 233433 346677776663
No 190
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=22.09 E-value=2.7e+02 Score=24.01 Aligned_cols=55 Identities=13% Similarity=0.018 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC----CCHHHHHHHHhhcCCeEEEEc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS----CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~----~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+||.|++..+....+...+..+-..|+.++.++.. ...+++...++. ++++++..
T Consensus 112 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 170 (423)
T 3lvm_A 112 KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-DTILVSIM 170 (423)
T ss_dssp TCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-TEEEEECC
T ss_pred CCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-CcEEEEEe
Confidence 67777766555444444443334556655544322 246667666653 45555554
No 191
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.01 E-value=1.9e+02 Score=26.20 Aligned_cols=56 Identities=16% Similarity=0.080 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC-CHHHHHHHHhhcCCeEEEEcC
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC-TIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~l~~~~~~~i~~~~ 139 (349)
.|.+|+|+......+-++-+ +..+|..++.+.... ..+....+.+..+...++.++
T Consensus 331 ~GKrv~i~~~~~~~~~l~~~-L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~~d 387 (483)
T 3pdi_A 331 EGKRVLLYTGGVKSWSVVSA-LQDLGMKVVATGTKKSTEEDKARIRELMGDDVKMLDE 387 (483)
T ss_dssp TTCEEEEECSSSCHHHHHHH-HHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBCCS
T ss_pred cCCEEEEECCCchHHHHHHH-HHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEEeC
Confidence 58899999887766655444 478999888765433 333333344444444444443
No 192
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=21.93 E-value=1.7e+02 Score=25.33 Aligned_cols=60 Identities=7% Similarity=-0.019 Sum_probs=36.7
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.|.. .++++|++|+|...-+.-..++.+| ...|+.++.+.. ++++++. +++.+++.++.
T Consensus 185 ~al~~-~~~~~g~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~--~~~~~~~-a~~lGa~~vi~ 244 (369)
T 1uuf_A 185 SPLRH-WQAGPGKKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTT--SEAKREA-AKALGADEVVN 244 (369)
T ss_dssp HHHHH-TTCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEES--SGGGHHH-HHHHTCSEEEE
T ss_pred HHHHh-cCCCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeC--CHHHHHH-HHHcCCcEEec
Confidence 44555 7899999999998744444444444 457887655543 3333333 34567766653
No 193
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=21.91 E-value=3e+02 Score=23.24 Aligned_cols=57 Identities=9% Similarity=-0.126 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC--C--CCHHHHHHHHhh-cCCeEEEEcC
Q 045351 82 SKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP--S--CTIPEILRQIHL-SKPVIAFATH 139 (349)
Q Consensus 82 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~--~--~~~~~l~~~l~~-~~~~~i~~~~ 139 (349)
++||.|++..+.... ....-++...|+.++.++. . ...++++..+++ -++++|+...
T Consensus 93 ~~gd~vl~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 154 (386)
T 2dr1_A 93 SKGGKVLVTIIGAFG-KRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITY 154 (386)
T ss_dssp CTTCEEEEEESSHHH-HHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCeEEEEcCCchh-HHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEe
Confidence 567777666443221 1123344556765554432 2 567778777754 3566666553
No 194
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=21.77 E-value=1.3e+02 Score=26.87 Aligned_cols=77 Identities=6% Similarity=0.007 Sum_probs=46.8
Q ss_pred eeeHHHHHHHHHHH--HH-HHh--hhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCC
Q 045351 58 RILYPDLTLRIKTL--AY-SLK--TKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKP 132 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~--a~-~L~--~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~ 132 (349)
.+++.+........ |. .|. +..++++|++|+|....+.--..+...+...|+.++.+. .+.+++.. +++.++
T Consensus 190 ~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~--~~~~~~~~-~~~lGa 266 (447)
T 4a0s_A 190 HLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV--SSAQKEAA-VRALGC 266 (447)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHH-HHHTTC
T ss_pred CCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe--CCHHHHHH-HHhcCC
Confidence 46777654332222 22 232 126899999999999866555555555667898776664 25555444 466777
Q ss_pred eEEEE
Q 045351 133 VIAFA 137 (349)
Q Consensus 133 ~~i~~ 137 (349)
+.++.
T Consensus 267 ~~~i~ 271 (447)
T 4a0s_A 267 DLVIN 271 (447)
T ss_dssp CCEEE
T ss_pred CEEEe
Confidence 66653
No 195
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=21.72 E-value=1.8e+02 Score=25.94 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=38.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHH---------HHHhcCCeEecCCCC----CCHHHHHHHHhh-cCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYL---------SLFSLGVVVSPCNPS----CTIPEILRQIHL-SKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~l---------A~~~~G~~~v~i~~~----~~~~~l~~~l~~-~~~~~i~~~~ 139 (349)
+++||.|++.....+.....++ .+...|+.+..++.. ...+++...+++ .++++|++..
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 5789988776523343333222 234568877777653 577888888874 5678888766
No 196
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=21.49 E-value=1.7e+02 Score=25.10 Aligned_cols=79 Identities=5% Similarity=0.008 Sum_probs=46.7
Q ss_pred ceeeHHHHHHHHHH--HHH-HHhhhcCCC-----CCCEEEEEcC-CCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHH
Q 045351 57 HRILYPDLTLRIKT--LAY-SLKTKYKLS-----KYDVAFLLSQ-NSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQI 127 (349)
Q Consensus 57 ~~~Ty~~l~~~~~~--~a~-~L~~~~g~~-----~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l 127 (349)
..+++.+....... .|. .|.+..+++ +|++|+|... -+.-..++.+|-...|+.++.+.. +.+++ ..+
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~--~~~~~-~~~ 213 (363)
T 4dvj_A 137 KTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS--RPETQ-EWV 213 (363)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS--SHHHH-HHH
T ss_pred CCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC--CHHHH-HHH
Confidence 34677665433222 222 233336787 8999999984 445555556655556777776654 34444 345
Q ss_pred hhcCCeEEEEc
Q 045351 128 HLSKPVIAFAT 138 (349)
Q Consensus 128 ~~~~~~~i~~~ 138 (349)
++.+++.++..
T Consensus 214 ~~lGad~vi~~ 224 (363)
T 4dvj_A 214 KSLGAHHVIDH 224 (363)
T ss_dssp HHTTCSEEECT
T ss_pred HHcCCCEEEeC
Confidence 66788877743
No 197
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=21.46 E-value=3.4e+02 Score=23.05 Aligned_cols=54 Identities=11% Similarity=-0.036 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC------CCHHHHHHHHhhcCCeEEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS------CTIPEILRQIHLSKPVIAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~------~~~~~l~~~l~~~~~~~i~~~ 138 (349)
+++||.|++..+....+. .++...|+.++.++.. ...++++..++. ++++|+..
T Consensus 111 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 170 (388)
T 1j32_A 111 IEPGDEVIIPAPFWVSYP---EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-KTKLLVFN 170 (388)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEEcCCCChhHH---HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-CceEEEEe
Confidence 467888887766544433 3445677766555432 456777777754 45666543
No 198
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.30 E-value=1.5e+02 Score=26.78 Aligned_cols=72 Identities=6% Similarity=0.011 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCC----------------CHHHHHHHHhhcCCeEEEEcCccccccc
Q 045351 83 KYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSC----------------TIPEILRQIHLSKPVIAFATHDTAHKIP 146 (349)
Q Consensus 83 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~----------------~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 146 (349)
.|.+|+|+.+....+-++-+. ..+|..++.+.... ...+++..+++.+|++++.+........
T Consensus 312 ~Gkrv~i~~~~~~~~~l~~~L-~elGm~vv~~~~~~~~~~~~~~~~~~v~~~D~~~le~~i~~~~pDllig~~~~~~~a~ 390 (458)
T 3pdi_B 312 SSARTAIAADPDLLLGFDALL-RSMGAHTVAAVVPARAAALVDSPLPSVRVGDLEDLEHAARAGQAQLVIGNSHALASAR 390 (458)
T ss_dssp TTCEEEEECCHHHHHHHHHHH-HTTTCEEEEEEESSCCSCCTTTTSSCEEESHHHHHHHHHHHHTCSEEEECTTHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEEECCCChhhhhCccCcEEeCCHHHHHHHHHhcCCCEEEEChhHHHHHH
Confidence 488999998865444444333 78998877653211 2246677788888999998766544444
Q ss_pred ccCcceEEe
Q 045351 147 QLKYGTVLL 155 (349)
Q Consensus 147 ~~~~~~~~~ 155 (349)
+++.+.+.+
T Consensus 391 k~gip~~~~ 399 (458)
T 3pdi_B 391 RLGVPLLRA 399 (458)
T ss_dssp HTTCCEEEC
T ss_pred HcCCCEEEe
Confidence 445444433
No 199
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=21.29 E-value=2e+02 Score=24.51 Aligned_cols=74 Identities=5% Similarity=0.040 Sum_probs=42.3
Q ss_pred eeeHHHHHHHHHHH--H-HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKTL--A-YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~--a-~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+.... .-+ | +.++. .++++|++|+|...-+.-..++.+| ...|+.++.++. +.+.++ .++..+++.
T Consensus 142 ~~~~~~aa~~-~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~ 215 (352)
T 1e3j_A 142 NVSLEEGALL-EPLSVGVHACRR-AGVQLGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTAR--SPRRLE-VAKNCGADV 215 (352)
T ss_dssp TSCHHHHHTH-HHHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEES--CHHHHH-HHHHTTCSE
T ss_pred CCCHHHHHhh-chHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEcC--CHHHHH-HHHHhCCCE
Confidence 4666664321 122 2 33444 7899999999998633444444444 467887554432 444443 445667766
Q ss_pred EEE
Q 045351 135 AFA 137 (349)
Q Consensus 135 i~~ 137 (349)
++.
T Consensus 216 ~~~ 218 (352)
T 1e3j_A 216 TLV 218 (352)
T ss_dssp EEE
T ss_pred EEc
Confidence 553
No 200
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=21.21 E-value=2.6e+02 Score=23.90 Aligned_cols=59 Identities=14% Similarity=-0.091 Sum_probs=36.0
Q ss_pred HHhhhcCCCCCCEEEEEcCCC-chHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 74 SLKTKYKLSKYDVAFLLSQNS-VRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 74 ~L~~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
.|.+..++++|++|+|....+ .-..++.+| ...|+.++.+.. +.+++. .++..+++.++
T Consensus 154 al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~--~~~~~~-~~~~~Ga~~~~ 213 (362)
T 2c0c_A 154 SLKELGGLSEGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCS--SDEKSA-FLKSLGCDRPI 213 (362)
T ss_dssp HHHHHTCCCTTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEEC--CHHHHH-HHHHcCCcEEE
Confidence 343325799999999998544 555555544 456887666543 344443 34456666655
No 201
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.15 E-value=2e+02 Score=19.54 Aligned_cols=54 Identities=13% Similarity=0.052 Sum_probs=32.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEEcCc
Q 045351 84 YDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFATHD 140 (349)
Q Consensus 84 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~~~~ 140 (349)
+.+|+++-++....-..--.+...|..+.. ..+.++....++..+++++++|-.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~---~~~~~~a~~~l~~~~~dlvi~d~~ 60 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTVL---AADGVDALELLGGFTPDLMICDIA 60 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEE---ESCHHHHHHHHTTCCCSEEEECCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEEE---eCCHHHHHHHHhcCCCCEEEEecC
Confidence 456777766554433333344455665543 235666667777788888888754
No 202
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=21.02 E-value=1.7e+02 Score=25.12 Aligned_cols=55 Identities=5% Similarity=-0.051 Sum_probs=34.2
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHHHhcCC-eEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 79 YKLSKYDVAFLLSQNSVRVPVLYLSLFSLGV-VVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
.++++|++|+|...-+.-..++.+ +...|+ .++.++. +.++++ .+++.+++.++.
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiql-ak~~Ga~~Vi~~~~--~~~~~~-~a~~lGa~~vi~ 242 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVG-CKAAGASRIIGVGT--HKDKFP-KAIELGATECLN 242 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHH-HHHHTCSEEEEECS--CGGGHH-HHHHTTCSEEEC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEECC--CHHHHH-HHHHcCCcEEEe
Confidence 789999999999853344444444 455787 5655543 333333 345677776663
No 203
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=20.76 E-value=4e+02 Score=22.87 Aligned_cols=55 Identities=4% Similarity=-0.102 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCC-----CCCHHHHHHHHhhc---CCe-EEEEc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNP-----SCTIPEILRQIHLS---KPV-IAFAT 138 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~---~~~-~i~~~ 138 (349)
+++||.|++..|.-..+. .++...|+.++.++. ....+.+...++.. +.+ +++..
T Consensus 123 ~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 186 (418)
T 3rq1_A 123 TEPGDEVLTADWYWGAYR---VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFN 186 (418)
T ss_dssp SCTTCEEEEESSCCTHHH---HHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCchhHH---HHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEe
Confidence 468999988776544433 345678887666643 44678888888763 555 44443
No 204
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=20.75 E-value=81 Score=27.01 Aligned_cols=64 Identities=9% Similarity=-0.072 Sum_probs=37.5
Q ss_pred HHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC-----CCHHHHHHHHhhcCCeEEEEcC
Q 045351 71 LAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS-----CTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 71 ~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+...|.. .++++||.|++..+.... ...++...|+.++.++.. ...+.++..++. +.++|+...
T Consensus 63 l~~al~~-~~~~~gd~Vi~~~~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 131 (367)
T 3nyt_A 63 LQIVQMA-LGVGPGDEVITPGFTYVA---TAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVS 131 (367)
T ss_dssp HHHHHHH-TTCCTTCEEEEESSSCTH---HHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCBC
T ss_pred HHHHHHH-hCCCCcCEEEECCCccHH---HHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc-CCcEEEeeC
Confidence 3344555 567889998877654333 344456778876655422 356666666532 556666544
No 205
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=20.60 E-value=50 Score=24.43 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=38.2
Q ss_pred eeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCch--HHHHHHHHHhcCCeEecC
Q 045351 59 ILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVR--VPVLYLSLFSLGVVVSPC 114 (349)
Q Consensus 59 ~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~i 114 (349)
=|-.++.+.+..+-..+.++.++.+.|.|.+...-..+ ...-..|+-..|+..+|+
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA~aaR~~Gw~~VPL 101 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAIAARNMGWTSTAL 101 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHHHHHHTTCTTSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHHHHcCCCccch
Confidence 36688999999998888776899999999988654433 223333344446554444
No 206
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=20.59 E-value=2.6e+02 Score=24.09 Aligned_cols=59 Identities=10% Similarity=-0.093 Sum_probs=30.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCC--e--EecCC---CCCCHHHHHHHHhhcCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGV--V--VSPCN---PSCTIPEILRQIHLSKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~--~--~v~i~---~~~~~~~l~~~l~~~~~~~i~~~~ 139 (349)
+++||.|++..+.....+.....+...|. . .++++ .....+++...++..++++|+...
T Consensus 115 ~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 180 (425)
T 3ecd_A 115 AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGF 180 (425)
T ss_dssp CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEcc
Confidence 57899988876643331111111112332 4 34444 245788999988777788887763
No 207
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=20.56 E-value=1.2e+02 Score=24.91 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=32.0
Q ss_pred HHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHH-hcCC
Q 045351 69 KTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLF-SLGV 109 (349)
Q Consensus 69 ~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~-~~G~ 109 (349)
..+...+.+ .|+.+++.|+++|..+.....+.+.+. .+|.
T Consensus 219 ~~l~~~~~~-~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~ 259 (285)
T 1uar_A 219 EELRALYEP-LGITKDKDIVVYCRIAERSSHSWFVLKYLLGY 259 (285)
T ss_dssp HHHHHHHGG-GTCCTTSEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCchHHHHHHHHHHHHHcCC
Confidence 456667777 899999999999998887777777777 7776
No 208
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=20.48 E-value=1.8e+02 Score=22.41 Aligned_cols=50 Identities=8% Similarity=-0.017 Sum_probs=33.1
Q ss_pred cCCCCCCEEEEEcCCCc--hHHHHHHHHHhcCCeEecCCCCC--CHHHHHHHHhh
Q 045351 79 YKLSKYDVAFLLSQNSV--RVPVLYLSLFSLGVVVSPCNPSC--TIPEILRQIHL 129 (349)
Q Consensus 79 ~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~--~~~~l~~~l~~ 129 (349)
-|+.+|+.++|.++++. -.++..++. ..|..++.++... +.+++....+.
T Consensus 15 Ggi~~G~~~~i~G~~GsGKTtl~~~l~~-~~~~~v~~i~~~~~~~~~~~~~~~~~ 68 (220)
T 2cvh_A 15 GGFAPGVLTQVYGPYASGKTTLALQTGL-LSGKKVAYVDTEGGFSPERLVQMAET 68 (220)
T ss_dssp SSBCTTSEEEEECSTTSSHHHHHHHHHH-HHCSEEEEEESSCCCCHHHHHHHHHT
T ss_pred CCCcCCEEEEEECCCCCCHHHHHHHHHH-HcCCcEEEEECCCCCCHHHHHHHHHh
Confidence 37999999999999874 444455555 5666665565444 66666665543
No 209
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=20.47 E-value=2.3e+02 Score=25.74 Aligned_cols=86 Identities=14% Similarity=0.063 Sum_probs=51.3
Q ss_pred CCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcCC-C---CHHHHHHHHHhhc--c---cEEEechHHHHHHHhcCCC
Q 045351 227 RPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMGK-F---DFGRMLKAVEEFR--V---SHVVLAPPVVLKMARDGGT 295 (349)
Q Consensus 227 ~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~---t~l~~~P~~l~~l~~~~~~ 295 (349)
+--+++...|+.+...+ ..+..+|.+|.++|+-+. . ....+.+.+.+.. . +++...+..-..|+.++
T Consensus 141 P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~-- 218 (486)
T 1t90_A 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHP-- 218 (486)
T ss_dssp ECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCT--
T ss_pred ccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCC--
Confidence 34578888887665444 567789999999999742 2 4466677777652 2 33333334556666553
Q ss_pred CCCCCCcchheehccCCCCCHHHHHHHHH
Q 045351 296 MDGYDLSSIEVVASGGAHLTLSVIRKYLQ 324 (349)
Q Consensus 296 ~~~~~l~~lr~i~~gG~~l~~~~~~~~~~ 324 (349)
.++.|.+.|+ ..+.+.+.+
T Consensus 219 -------~v~~I~fTGS---~~~g~~i~~ 237 (486)
T 1t90_A 219 -------EIKAISFVGS---KPVGEYVYK 237 (486)
T ss_dssp -------TEEEEEEESC---HHHHHHHHH
T ss_pred -------CCCEEEEeCC---HHHHHHHHH
Confidence 3556665554 344444433
No 210
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=20.46 E-value=1.7e+02 Score=25.41 Aligned_cols=87 Identities=8% Similarity=-0.075 Sum_probs=50.8
Q ss_pred CeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHH
Q 045351 47 TTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQ 126 (349)
Q Consensus 47 ~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 126 (349)
++.+-.++.+..-||++--. ...+.. +.+ .|. +.| +....+=.-..+.++|.+.|..++.+-|...+.+....
T Consensus 62 ~v~~K~E~~~ptGSfK~Rga-~~~i~~-a~~-~g~---~~v-v~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~ 134 (364)
T 4h27_A 62 SVYLKMDSAQPSGSFKIRGI-GHFCKR-WAK-QGC---AHF-VCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIER 134 (364)
T ss_dssp EEEEEEGGGSTTSBTHHHHH-HHHHHH-HHH-TTC---CEE-EECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHH
T ss_pred EEEEEeCCCCCCCCHHHHHH-HHHHHH-HHh-cCC---CEE-EEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHH
Confidence 45554443345556665421 112222 222 221 333 34444555666777788899876655555556667778
Q ss_pred HhhcCCeEEEEcCc
Q 045351 127 IHLSKPVIAFATHD 140 (349)
Q Consensus 127 l~~~~~~~i~~~~~ 140 (349)
++..++++++++..
T Consensus 135 ~~~~GA~Vv~v~~~ 148 (364)
T 4h27_A 135 LKNEGATVKVVGEL 148 (364)
T ss_dssp HHTTTCEEEEECSS
T ss_pred HHHcCCEEEEECCC
Confidence 88899999999864
No 211
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=20.30 E-value=3.8e+02 Score=22.34 Aligned_cols=91 Identities=7% Similarity=-0.145 Sum_probs=54.1
Q ss_pred CCCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcC-CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHH
Q 045351 45 PDTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYK-LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEI 123 (349)
Q Consensus 45 ~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l 123 (349)
+.++.+-.++.+..-||++--.. ..+.. +.+ .| +++|+.|+. ...+=.-..+.++|.+.|..++.+-|...+..-
T Consensus 30 g~~i~~K~E~~~ptgSfK~R~a~-~~l~~-a~~-~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k 105 (313)
T 2q3b_A 30 VADIVAKLEFFNPANSVKDRIGV-AMLQA-AEQ-AGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLER 105 (313)
T ss_dssp CSEEEEEEGGGSTTSBTHHHHHH-HHHHH-HHH-TTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHH
T ss_pred CcEEEEEehhcCCCCcHHHHHHH-HHHHH-HHH-cCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHH
Confidence 34555544433445667663322 22333 333 34 467776655 444555556667777899876655454444555
Q ss_pred HHHHhhcCCeEEEEcC
Q 045351 124 LRQIHLSKPVIAFATH 139 (349)
Q Consensus 124 ~~~l~~~~~~~i~~~~ 139 (349)
...++..++++++++.
T Consensus 106 ~~~~~~~Ga~v~~~~~ 121 (313)
T 2q3b_A 106 RMLLRAYGAELILTPG 121 (313)
T ss_dssp HHHHHHTTCEEEEECG
T ss_pred HHHHHHCCCEEEEeCC
Confidence 6678889999999875
No 212
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=20.30 E-value=2.4e+02 Score=27.17 Aligned_cols=47 Identities=6% Similarity=0.020 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCC---------C-----CHHHHHHHHhhc
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPS---------C-----TIPEILRQIHLS 130 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~---------~-----~~~~l~~~l~~~ 130 (349)
+++||.|++.-++..... -|+..+|+.++.+++. . +.+.++..++..
T Consensus 232 ~~pGD~VLv~r~~H~S~~---~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~ 292 (715)
T 3n75_A 232 APAGSTILIDRNCHKSLT---HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKET 292 (715)
T ss_dssp CCTTCEEEEESSCCHHHH---HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHS
T ss_pred CCCCCEEEECCCccHHHH---HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhC
Confidence 689999988755544433 3678899998887753 2 578888888764
No 213
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=20.26 E-value=1.7e+02 Score=24.99 Aligned_cols=60 Identities=7% Similarity=-0.143 Sum_probs=36.6
Q ss_pred HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeEEEE
Q 045351 73 YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVIAFA 137 (349)
Q Consensus 73 ~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~i~~ 137 (349)
+.|.. .++++|++|+|...-+.-..++.+ +...|+.++.++... ++++ .+++.+++.++.
T Consensus 170 ~~l~~-~~~~~g~~VlV~GaG~vG~~~~ql-ak~~Ga~Vi~~~~~~--~~~~-~~~~lGa~~v~~ 229 (360)
T 1piw_A 170 SPLVR-NGCGPGKKVGIVGLGGIGSMGTLI-SKAMGAETYVISRSS--RKRE-DAMKMGADHYIA 229 (360)
T ss_dssp HHHHH-TTCSTTCEEEEECCSHHHHHHHHH-HHHHTCEEEEEESSS--TTHH-HHHHHTCSEEEE
T ss_pred HHHHH-cCCCCCCEEEEECCCHHHHHHHHH-HHHCCCEEEEEcCCH--HHHH-HHHHcCCCEEEc
Confidence 44555 789999999999983344444444 445788766655322 2222 234466776663
No 214
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=20.22 E-value=3.4e+02 Score=22.85 Aligned_cols=91 Identities=11% Similarity=-0.087 Sum_probs=55.7
Q ss_pred CCeEEEeCCCCceeeHHHHHHHHHHHHHHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHH
Q 045351 46 DTTALIDTASRHRILYPDLTLRIKTLAYSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILR 125 (349)
Q Consensus 46 ~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 125 (349)
.++.+-.++.+..=||++-- ....+...+.+ --+++|+.|+-. ..+-.-..+.+++.+.|..++.+-|...+..-..
T Consensus 37 ~~v~~K~E~~~ptGSfK~R~-a~~~l~~a~~~-g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 113 (325)
T 3dwg_A 37 VRLWAKLEDRNPTGSIKDRP-AVRMIEQAEAD-GLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQ 113 (325)
T ss_dssp EEEEEEETTSSTTSBTTHHH-HHHHHHHHHHT-TCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHH
T ss_pred cEEEEEECCCCCCCChHHHH-HHHHHHHHHHc-CCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 35555555444445665522 12222333333 235677776654 4455666777777888987666655555556677
Q ss_pred HHhhcCCeEEEEcC
Q 045351 126 QIHLSKPVIAFATH 139 (349)
Q Consensus 126 ~l~~~~~~~i~~~~ 139 (349)
.++..++++++++.
T Consensus 114 ~~~~~GA~V~~~~~ 127 (325)
T 3dwg_A 114 LLELYGAQIIFSAA 127 (325)
T ss_dssp HHHHHTCEEEEECS
T ss_pred HHHHCCCEEEEECC
Confidence 88899999999975
No 215
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=20.16 E-value=2.2e+02 Score=24.06 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhc--CCeEecCCCCCCHHHHHHHHhhcCCeEEE
Q 045351 80 KLSKYDVAFLLSQNSVRVPVLYLSLFSL--GVVVSPCNPSCTIPEILRQIHLSKPVIAF 136 (349)
Q Consensus 80 g~~~gd~V~i~~~n~~~~~~~~lA~~~~--G~~~v~i~~~~~~~~l~~~l~~~~~~~i~ 136 (349)
++ +|++|+|....+.-...+.+|- .. |+.++.++. +.+.++ .+++.+++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak-~~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILK-ALMKNITIVGISR--SKKHRD-FALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHH-HHCTTCEEEEECS--CHHHHH-HHHHHTCSEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHH-HhcCCCEEEEEeC--CHHHHH-HHHHhCCCEEe
Confidence 78 9999999998444555555554 45 887665543 444443 34556777665
No 216
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=20.13 E-value=2.7e+02 Score=25.33 Aligned_cols=66 Identities=11% Similarity=-0.015 Sum_probs=41.4
Q ss_pred CCcEEEEecChhhHhhH--HHHHhhhhcCCEEEEcC-CC---CHHHHHHHHHhh--cccEEEec---hHHHHHHHhc
Q 045351 227 RPAVVLCTVPYFHSYGF--TCCLRSLGMGESLVCMG-KF---DFGRMLKAVEEF--RVSHVVLA---PPVVLKMARD 292 (349)
Q Consensus 227 ~~~~~l~~~p~~~~~g~--~~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~--~~t~l~~~---P~~l~~l~~~ 292 (349)
+--+++...|+.+...+ ..+..+|.+|.++|+-+ .. ....+.+.+.+. ....+-.+ +..-..|+..
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~ 222 (495)
T 3b4w_A 146 PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSN 222 (495)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTC
T ss_pred cCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhC
Confidence 34578888887665555 56778999999999974 22 445667777775 22333333 3344555544
No 217
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=20.05 E-value=2.2e+02 Score=25.35 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=38.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHH---------HHHhcCCeEecCCC---CCCHHHHHHHHhh-cCCeEEEEcC
Q 045351 81 LSKYDVAFLLSQNSVRVPVLYL---------SLFSLGVVVSPCNP---SCTIPEILRQIHL-SKPVIAFATH 139 (349)
Q Consensus 81 ~~~gd~V~i~~~n~~~~~~~~l---------A~~~~G~~~v~i~~---~~~~~~l~~~l~~-~~~~~i~~~~ 139 (349)
+++||.|++.....+.....++ .+...|+.+..++. ....+++...+++ .++++|++..
T Consensus 113 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 6889998877523343333333 23356888777764 2567888888875 5788888876
No 218
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=20.01 E-value=3.8e+02 Score=22.29 Aligned_cols=76 Identities=9% Similarity=-0.000 Sum_probs=44.7
Q ss_pred eeeHHHHHHHHHHHH---HHHhhhcCCCCCCEEEEEcCCCchHHHHHHHHHhcCCeEecCCCCCCHHHHHHHHhhcCCeE
Q 045351 58 RILYPDLTLRIKTLA---YSLKTKYKLSKYDVAFLLSQNSVRVPVLYLSLFSLGVVVSPCNPSCTIPEILRQIHLSKPVI 134 (349)
Q Consensus 58 ~~Ty~~l~~~~~~~a---~~L~~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 134 (349)
.+++.+.......++ +.|.+..++++|++|+|....+.--..+...+...|+.++.++. +.+.+... +..+.+.
T Consensus 112 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~--~~~~~~~~-~~~g~~~ 188 (327)
T 1qor_A 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG--TAQKAQSA-LKAGAWQ 188 (327)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES--SHHHHHHH-HHHTCSE
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHH-HHcCCCE
Confidence 477777543333332 33443268999999999986565555555555567887766643 34444433 3456555
Q ss_pred EE
Q 045351 135 AF 136 (349)
Q Consensus 135 i~ 136 (349)
++
T Consensus 189 ~~ 190 (327)
T 1qor_A 189 VI 190 (327)
T ss_dssp EE
T ss_pred EE
Confidence 44
Done!