BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045354
(615 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides
Thetaiotaomicron
Length = 612
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 127/267 (47%), Gaps = 29/267 (10%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
+YDF+G D F +L QE G Y I+R GPYVC+EW GG P WL I+LR + Y
Sbjct: 69 RYDFAGQKDIAAFCRLAQENGXYVIVRPGPYVCAEWEXGGLPWWLLKKKDIKLREQDPYY 128
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYG--NIMGPYKEAGKSYINWCAQM 120
+++F ++ A+L +GG II Q+ENEYG I PY + +
Sbjct: 129 XERVKLFLNEVGKQL--ADLQISKGGNIIXVQVENEYGAFGIDKPYISEIRDXVK----- 181
Query: 121 ATSQNIGVPWIMCQ-----QSDAPQPMINTCN---GFYCDEFVPN----NPKSPKMWTEN 168
+ GVP C +++A ++ T N G DE P +P +E
Sbjct: 182 -QAGFTGVPLFQCDWNSNFENNALDDLLWTINFGTGANIDEQFKRLKELRPDTPLXCSEF 240
Query: 169 WTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPF-----I 223
W+GWF WG K R+ +++ + + Y HGGT+FG G F
Sbjct: 241 WSGWFDHWGAKHETRSAEELVKGXKEXLDR-NISFSLYXTHGGTSFGHWGGANFPNFSPT 299
Query: 224 ITSYDYDAPLDEYGNLNQPKWGHLKQL 250
TSYDYDAP++E G + PK+ ++ L
Sbjct: 300 CTSYDYDAPINESGKVT-PKYLEVRNL 325
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 532 WYRTSFKIPPGTSPVVVDLQGMGKGHAWVNGNSLGRYW---PSQIADTNGC 579
+YR++F + ++ KG WVNG+++GRYW P Q GC
Sbjct: 510 YYRSTFNLNE-LGDTFLNXXNWSKGXVWVNGHAIGRYWEIGPQQTLYVPGC 559
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8C|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8D|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase
pdb|4E8D|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase
Length = 595
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
++ F G+LD KF ++ Q+ GLYAI+R P++C+EW +GG P WL +++R+++ Y
Sbjct: 64 EFHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLLT-KNMRIRSSDPAY 122
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
+ + +++ GG I++ Q+ENEYG+ Y E K+Y+ Q+
Sbjct: 123 IEAVGRYYDQLLPRLVPRL--LDNGGNILMMQVENEYGS----YGE-DKAYLRAIRQLME 175
Query: 123 SQNIGVPWIMCQQSDAP-QPMINTCNGFYCDEFVPNN--------------------PKS 161
+ P SD P + + D FV N K
Sbjct: 176 ECGVTCPLFT---SDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW 232
Query: 162 PKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFG------ 215
P M E W GWF +W + R P++++ AV + G + N YM+HGGTNFG
Sbjct: 233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQGSI--NLYMFHGGTNFGFMNGCS 290
Query: 216 -RDAGGPFIITSYDYDAPLDEYGN 238
R +TSYDYDA LDE GN
Sbjct: 291 ARGTLDLPQVTSYDYDALLDEEGN 314
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 548 VDLQGMGKGHAWVNGNSLGRYW 569
+DL GKG A+VNG +LGR+W
Sbjct: 523 LDLSEFGKGVAFVNGQNLGRFW 544
>pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex
With Galactose
pdb|3THC|B Chain B, Crystal Structure Of Human Beta-Galactosidase In Complex
With Galactose
pdb|3THC|C Chain C, Crystal Structure Of Human Beta-Galactosidase In Complex
With Galactose
pdb|3THC|D Chain D, Crystal Structure Of Human Beta-Galactosidase In Complex
With Galactose
pdb|3THD|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex
With 1- Deoxygalactonojirimycin
pdb|3THD|B Chain B, Crystal Structure Of Human Beta-Galactosidase In Complex
With 1- Deoxygalactonojirimycin
pdb|3THD|C Chain C, Crystal Structure Of Human Beta-Galactosidase In Complex
With 1- Deoxygalactonojirimycin
pdb|3THD|D Chain D, Crystal Structure Of Human Beta-Galactosidase In Complex
With 1- Deoxygalactonojirimycin
Length = 654
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
QY FS + D F +L E GL I+R GPY+C+EW GG P WL I LR+++ Y
Sbjct: 72 QYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDY 131
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
+ + V + K L GGP+I Q+ENEYG+ Y Y+ + Q
Sbjct: 132 LAAVDKWLG--VLLPKMKPLLYQNGGPVITVQVENEYGS----YFACDFDYLRFL-QKRF 184
Query: 123 SQNIGVPWIMCQQSDAPQPMIN--TCNGFY-----------CDEFVPNN---PKSPKMWT 166
++G ++ A + + G Y D F+ PK P + +
Sbjct: 185 RHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINS 244
Query: 167 ENWTGWFKKWGDKDPHRTPQDVSFAVARF-FQAGGVLQNYYMYHGGTNFG--RDAGGPFI 223
E +TGW WG PH T + + A + + A G N YM+ GGTNF A P+
Sbjct: 245 EFYTGWLDHWG--QPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPYA 302
Query: 224 I--TSYDYDAPLDEYGNLNQ 241
TSYDYDAPL E G+L +
Sbjct: 303 AQPTSYDYDAPLSEAGDLTE 322
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 35/141 (24%)
Query: 449 LTLLSATVGLQNYGEFFDLGPEGLAGGPVELNVDGMAS-LNLSSNI---WNYKVGLNGEA 504
L LL +G NYG + + + G+ S L LSSNI W +A
Sbjct: 450 LDLLVENMGRVNYGAYIN-------------DFKGLVSNLTLSSNILTDWTIFPLDTEDA 496
Query: 505 KRLY------DPNSPHPQIW---KSSKKLPIGKPMKWYRTSFKIPPGTSPV----VVDLQ 551
R + + H + W S+ LP +Y +F IP G + +
Sbjct: 497 VRSHLGGWGHRDSGHHDEAWAHNSSNYTLP-----AFYMGNFSIPSGIPDLPQDTFIQFP 551
Query: 552 GMGKGHAWVNGNSLGRYWPSQ 572
G KG W+NG +LGRYWP++
Sbjct: 552 GWTKGQVWINGFNLGRYWPAR 572
>pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium
Sp.
pdb|1XC6|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium
Sp. In Complex With Galactose
Length = 971
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 143/344 (41%), Gaps = 44/344 (12%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
Y G D FF +EAG+Y + R GPY+ +E + GGFP WL + GI LRT++E Y
Sbjct: 68 HYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEAY 126
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEY-GNIMGPYKEAGKSYINWCAQMA 121
+ + I +A + GGPIIL Q ENEY G G SY+ + A
Sbjct: 127 LKATDNYASNIAATIAKAQI--TNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHA 184
Query: 122 TSQNIGVPWIM----CQQSDAPQPMINTCN---------GFYC----------------D 152
I VP+I +AP + GF C
Sbjct: 185 RDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHT 244
Query: 153 EFVPNNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARF-----FQAGGVLQNYYM 207
+P +P E G F WG + ++ R F G N YM
Sbjct: 245 SHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYM 304
Query: 208 YHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKLGEKLLTS--GN 265
GGTN+G + G P TSYDY + + E N+ + K+ LK L K+ L + G+
Sbjct: 305 IFGGTNWG-NLGHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPGYLVANPGD 363
Query: 266 VTTKQFGNGVNLTT---YSNTTSGERFCFLSNTNTSQDANVDLQ 306
++T + N +LT + +S F + +++ S A+V+ +
Sbjct: 364 LSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYK 407
>pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei
Beta-Galactosidase
pdb|3OGR|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Galactose
pdb|3OGS|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Iptg
pdb|3OGV|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Petg
Length = 1003
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 140/336 (41%), Gaps = 42/336 (12%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
++ G FF+ +AG+Y + R GPY+ +E + GGFP WL + G +LRT+ Y
Sbjct: 88 RFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDY 146
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
+ + I ++ +A + GGP+IL Q ENEY K Y+ + A
Sbjct: 147 LHATDNYVAHIASIIAKAQI--TNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQAR 204
Query: 123 SQNIGVPWI----MCQQSDAPQPMINTCN---------GFYC-------DEFVPN----- 157
+ I VP I + AP + + + GF C D +P
Sbjct: 205 NAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQD 264
Query: 158 ----NPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFF-----QAGGVLQNYYMY 208
+P +P E G F +G + V+ R F AG + N YM
Sbjct: 265 HLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMT 324
Query: 209 HGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKLGEKLLTSG--NV 266
GGTN+G + G P TSYDY A + E +++ K+ LK + +K+ +T+ N
Sbjct: 325 FGGTNWG-NLGHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPGYITATPENA 383
Query: 267 TTKQFGNGVN--LTTYSNTTSGERFCFLSNTNTSQD 300
T + + N +T SG+ F +S D
Sbjct: 384 TQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTD 419
>pdb|3R7T|A Chain A, Crystal Structure Of Adenylosuccinate Synthetase From
Campylobacter Jejuni
Length = 419
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 92 LAQIENEYGNIMGPYKEAGKSYINWCAQMATSQNIGVPWIMCQQSDAPQ--PMINTCNGF 149
+AQI E G G + G + + A T++ G+ + + D I C +
Sbjct: 289 IAQIGKEIGVSTGRKRRCG--WFDAVAVRYTARLNGLDALSLXKLDVLDGFEKIKICRAY 346
Query: 150 YCD----EFVPNNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNY 205
+++P++ ++ + E GW K +G KD P++ +AR + GV Y
Sbjct: 347 EYKGXEIDYIPSDLENVQPIYEEXDGWDKVFGIKDYDLLPENAKKYIARLEELAGVKVKY 406
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 11/135 (8%)
Query: 46 WLHNIPG-IQLRTNNEIYKNEMQIFTTKIVNMCKEANLFAPQGG---PIILAQIENEYGN 101
+ HN P I R+N ++ + ++ V + KE + A + P IL + G
Sbjct: 108 FCHNFPEWIVDRSNGDVAADSYHMYAED-VRLLKEMGMDAYRFSISWPRILPK-----GT 161
Query: 102 IMGPYKEAGKSYINWCAQMATSQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKS 161
+ G E G Y N + I P+I D PQ ++ GF + + +
Sbjct: 162 LAGGINEKGVEYYNKLIDLLLENGIE-PYITIFHWDTPQALVEAYGGFLDERIIKDYTDF 220
Query: 162 PKMWTENWTGWFKKW 176
K+ E + K W
Sbjct: 221 AKVCFEKFGKTVKNW 235
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 321 LHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQ--ETIRDTLHGKGRFNATKLIE 378
++GC K++Y K N +K + +G W ++ +T T G+ +F T L
Sbjct: 70 VYGCIKQMYLLKKNNRN----LKTLLSIG---GWTYSPNFKTPASTEEGRKKFADTSLKL 122
Query: 379 QKEATSDESDYLWYMTSIENMGKSSHNATLYVKSSGQVLHAYVNSKHIGSQFGYDFEFKQ 438
K+ D D W E K +++ L +K+ + L AY ++KH
Sbjct: 123 MKDLGFDGIDIDWQYPEDE---KQANDFVLLLKACREALDAY-SAKHPN----------- 167
Query: 439 PAILRPGKNFLTLLSATVGLQNYGEF 464
GK FL +++ G QNY +
Sbjct: 168 ------GKKFLLTIASPAGPQNYNKL 187
>pdb|1COZ|A Chain A, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
Bacillus Subtilis
pdb|1COZ|B Chain B, Ctp:glycerol-3-Phosphate Cytidylyltransferase From
Bacillus Subtilis
pdb|1N1D|A Chain A, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|B Chain B, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|C Chain C, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
pdb|1N1D|D Chain D, Glycerol-3-phosphate Cytidylyltransferase Complexed With
Cdp-glycerol
Length = 129
Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 236 YGNLNQPKWGHLKQLHEAIKLGEKLLTSGNVTTKQF 271
YG + WGH+K L A +LG+ L+ + ++T +F
Sbjct: 7 YGTFDLLHWGHIKLLERAKQLGDYLVVA--ISTDEF 40
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 321 LHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQ--ETIRDTLHGKGRFNATKLIE 378
++GC K++Y K N +K + +G W ++ +T T G+ +F T L
Sbjct: 70 VYGCIKQMYLLKKNNRN----LKTLLSIG---GWTYSPNFKTPASTEEGRKKFADTSLKL 122
Query: 379 QKEATSDESDYLWYMTSIENMGKSSHNATLYVKSSGQVLHAYVNSKHIGSQFGYDFEFKQ 438
K+ D D W E K +++ L +K+ + L AY ++KH
Sbjct: 123 MKDLGFDGIDIDWEYPEDE---KQANDFVLLLKACREALDAY-SAKHPN----------- 167
Query: 439 PAILRPGKNFLTLLSATVGLQNYGEF 464
GK FL +++ G QNY +
Sbjct: 168 ------GKKFLLTIASPAGPQNYNKL 187
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 321 LHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQ--ETIRDTLHGKGRFNATKLIE 378
++GC K++Y K N +K + +G W ++ +T T G+ +F T L
Sbjct: 70 VYGCIKQMYLLKKNNRN----LKTLLSIG---GWTYSPNFKTPASTEEGRKKFADTSLKL 122
Query: 379 QKEATSDESDYLWYMTSIENMGKSSHNATLYVKSSGQVLHAYVNSKHIGSQFGYDFEFKQ 438
K+ D D W E K +++ L +K+ + L AY ++KH
Sbjct: 123 MKDLGFDGIDINWEYPEDE---KQANDFVLLLKACREALDAY-SAKHPN----------- 167
Query: 439 PAILRPGKNFLTLLSATVGLQNYGEF 464
GK FL +++ G QNY +
Sbjct: 168 ------GKKFLLTIASPAGPQNYNKL 187
>pdb|2CQK|A Chain A, Solution Structure Of The La Domain Of C-Mpl Binding
Protein
Length = 101
Score = 29.3 bits (64), Expect = 6.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 289 FCFLSNTNTSQDANVDLQQDGKYFVPAWSVS 319
FCF S N S+D + Q D F+P W+V+
Sbjct: 24 FCF-SRENLSKDLYLISQMDSDQFIPIWTVA 53
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,523,530
Number of Sequences: 62578
Number of extensions: 1023858
Number of successful extensions: 2083
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2055
Number of HSP's gapped (non-prelim): 19
length of query: 615
length of database: 14,973,337
effective HSP length: 105
effective length of query: 510
effective length of database: 8,402,647
effective search space: 4285349970
effective search space used: 4285349970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)