BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045356
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50134|DCOR_DATST Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1
Length = 431
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/402 (55%), Positives = 287/402 (71%), Gaps = 13/402 (3%)
Query: 24 ERVPTITKDGGLLEFMESIILKR-QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVK 82
+V +++D L +FM SII ++ Q+ +PFYVLDLG V+SL Q + LP + P+YAVK
Sbjct: 36 RKVVPLSRDA-LQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVK 94
Query: 83 CNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVN 142
CNPEP+ L L+A+GSNFDCAS +EI+ VL+L +SPDRI++AN CKP S I +AA VGVN
Sbjct: 95 CNPEPSFLSMLSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVN 154
Query: 143 LTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASG 202
LTTFDS E+ KIRK HPKCELL+RIK DG AR P+ K+GA PEEV LL AQA+
Sbjct: 155 LTTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNARCPMGPKYGALPEEVEPLLRTAQAAR 214
Query: 203 LAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA 262
L V GV+FHIGS + A+ AIA AK VFETAAR GM+KM VLDIGGGF F A
Sbjct: 215 LTVSGVSFHIGSGDADSKAYLGAIAAAKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTA 274
Query: 263 ASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGK 322
++ ++ A++ +F +E L++I+EPGRF A+TAFTLAT +IGKRVR ELREYWINDG
Sbjct: 275 SAAVRSALEQHFHDEQ---ELTIIAEPGRFFAETAFTLATTIIGKRVRGELREYWINDGL 331
Query: 323 YGSFGWLSSEEVIAKCGAHILASASHSNN------RTYRSTVFGPTCAAVDKVFTGHQLP 376
YGS + + A A LA S+ +N +T+ STVFGPTC A+D V +QLP
Sbjct: 332 YGSMNCVLYDH--ATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLP 389
Query: 377 ELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVVRSDPT 418
EL+V+DWL+F +MGAYT A G+NFNGFNT+AI T++ + P+
Sbjct: 390 ELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYAYPS 431
>sp|O22616|DCOR_SOLLC Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2
Length = 431
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/401 (55%), Positives = 284/401 (70%), Gaps = 13/401 (3%)
Query: 24 ERVPTITKDGGLLEFMESIILKR-QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVK 82
+V ++KD L +FM SII ++ Q+ +PFYVLDLG V+SL Q S LP + P+YAVK
Sbjct: 36 RKVVPLSKDA-LQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVK 94
Query: 83 CNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVN 142
CNPEP+ L L+A+GSNFDCAS +EI+ VL+ +SPDRI++AN CKP S I +A +GVN
Sbjct: 95 CNPEPSFLSMLSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVN 154
Query: 143 LTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASG 202
LTT+DS E+ KIRK HPKCELL+RIK DG AR P+ K+GA PEE+ LL AQA+
Sbjct: 155 LTTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMGPKYGALPEEIEPLLRTAQAAR 214
Query: 203 LAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA 262
L V GV+FHIGS + +A+ AIA AK VFETAA+LGM KM VLDIGGGF F A
Sbjct: 215 LTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTA 274
Query: 263 ASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGK 322
A +K A++T+F + L++I+EPGRF A+TAFTLAT +IGKRVR EL+EYWINDG
Sbjct: 275 APAVKSALETHFHDFP---ELTIIAEPGRFFAETAFTLATTIIGKRVRGELKEYWINDGL 331
Query: 323 YGSFGWLSSEEVIAKCGAHILASASHSNN------RTYRSTVFGPTCAAVDKVFTGHQLP 376
YGS + + A A LA S+ NN +T+ STVFGPTC A+D V +QLP
Sbjct: 332 YGSMNCVLYDH--ATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLP 389
Query: 377 ELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVVRSDP 417
EL+V+DWL+F +MGAYT A G+NFNGFNT+AI T++ + P
Sbjct: 390 ELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYAYP 430
>sp|Q8S3N2|DCOR_CAPAN Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1
Length = 435
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/402 (54%), Positives = 282/402 (70%), Gaps = 13/402 (3%)
Query: 24 ERVPTITKDGGLLEFMESIILKR-QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVK 82
+V ++KD L +FM SII ++ Q +PFYVLDLG V+SL Q LP V P+YAVK
Sbjct: 40 RKVVPLSKDA-LQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFYAVK 98
Query: 83 CNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVN 142
CNPEP+ L LAA+GSNF CAS +EI+ VL+L +SP+RI++AN CKP S I +A VGVN
Sbjct: 99 CNPEPSFLSMLAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKVGVN 158
Query: 143 LTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASG 202
LTT+DS E+ KI+K HPKCELL+RIK DG AR P+ K+GA PEE+ LL AQAS
Sbjct: 159 LTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKYGALPEEIEPLLRIAQASR 218
Query: 203 LAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA 262
L V GV+FHIGS + +A+ AIA AK VFETAA+ GM+KM VLDIGGGF F A
Sbjct: 219 LTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTA 278
Query: 263 ASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGK 322
A+ +K A+Q +F NE L++I+EPGRF A+TAFTLAT +IGKRVR +LREYWINDG
Sbjct: 279 ATAVKSALQQHFSNEP---ELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYWINDGL 335
Query: 323 YGSFGWLSSEEVIAKCGAHILASASH------SNNRTYRSTVFGPTCAAVDKVFTGHQLP 376
YGS + + A A LA S+ S ++ + ST+FGPTC A+D V + +P
Sbjct: 336 YGSMNCVLYDH--ATVTATPLACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYHVP 393
Query: 377 ELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVVRSDPT 418
EL+V+DW++F +MGAYT A G+NFNGFNT+AI T++ + P+
Sbjct: 394 ELQVNDWVIFPNMGAYTKAAGSNFNGFNTSAIVTHLAYAYPS 435
>sp|P07805|DCOR_TRYBB Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2
Length = 423
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 232/392 (59%), Gaps = 39/392 (9%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+PF+V DLG ++ + LP V P+YAVKCN + +L TLAALG+ FDCAS +EIQ
Sbjct: 36 DPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQR 95
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V + V P++IIYAN CK +SHI+YA GV++ TFD + EL+K+ K HPK ++++RI +
Sbjct: 96 VRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIST 155
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D AR L KFGA E+ +L A+ + V GV+FH+GS +T+ F AI++++
Sbjct: 156 D-DSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 214
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ LG M +LDIGGGF PG F E A +I +A++ +FP + L
Sbjct: 215 FVFDMGTELGFN-MHILDIGGGF---PGTRDAPLKFEEIAGVINNALEKHFPPDL---KL 267
Query: 284 SVISEPGRFLADTAFTLATKVIGKRVRDELRE--------------YWINDGKYGSFGWL 329
++++EPGR+ +AFTLA VI K+V ++ Y++NDG YGSF +
Sbjct: 268 TIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCI 327
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ + + + N + Y S+V+GPTC +D++ + LPE++V +WL+F DM
Sbjct: 328 LYDHAVVR---PLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDM 384
Query: 390 GAYTTACGTNFNGFNTAAI-------PTYVVR 414
GAYT ++FNGF + I P +VVR
Sbjct: 385 GAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVR 416
>sp|P27117|DCOR_BOVIN Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
Length = 461
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 228/389 (58%), Gaps = 34/389 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG ++ + + + LP V P+YAVKCN I++TLAA+G+ FDCAS +EIQ
Sbjct: 38 DAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V +L V P+RIIYAN CK VS IKYAA+ GV + TFDS EL K+ + HPK +L++RI +
Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ + VIGV+FH+GS T+ + F AI++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ A +G M +LDIGGGF PG F E S+I A+ YFP+++ +
Sbjct: 217 CVFDMGAEVGFN-MYLLDIGGGF---PGSEDVKLKFEEITSVINPALDKYFPSDSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV--------------RDELREYWINDGKYGSFGWL 329
+I+EPGR+ +AFTLA +I K++ D Y++NDG YGSF +
Sbjct: 270 RIIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCI 329
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +M
Sbjct: 330 LYDHAHVK---PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386
Query: 390 GAYTTACGTNFNGFNTAAIPTYVVRSDPT 418
GAYT A + FNGF I Y V S PT
Sbjct: 387 GAYTVAAASTFNGFQRPTI--YYVMSGPT 413
>sp|P09057|DCOR_RAT Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1
Length = 461
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/386 (41%), Positives = 226/386 (58%), Gaps = 32/386 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG V+ + + + LP V P+YAVKCN AI+ TLAA+G+ FDCAS +EIQ
Sbjct: 38 DAFYVADLGDVLKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V L V P+RIIYAN CK VS IKYAAS GV + TFDS EL K+ + HPK +L++RI +
Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ + VIGV+FH+GS T+ + F A+++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ +G + M +LDIGGGF PG F E S+I A+ YFP+++ +
Sbjct: 217 CVFDMGTEVGFS-MYLLDIGGGF---PGSEDTKLKFEEITSVINPALDKYFPSDSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV----------RDELRE----YWINDGKYGSFGWL 329
+I+EPGR+ +AFTLA +I K+ DE E Y++NDG YGSF +
Sbjct: 270 RIIAEPGRYYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCI 329
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +M
Sbjct: 330 LYDHAHVKA---LLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENM 386
Query: 390 GAYTTACGTNFNGFNTAAIPTYVVRS 415
GAYT A + FNGF I + RS
Sbjct: 387 GAYTVAAASTFNGFQRPNIYYVMSRS 412
>sp|P27119|DCOR_MUSPA Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1
Length = 461
Score = 284 bits (727), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 226/388 (58%), Gaps = 34/388 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG ++ + + + LP V P+YAVKCN AI+ TLAA G+ FDCAS +EIQ
Sbjct: 38 DAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V L V P+RIIYAN CK VS IKYAAS GV + TFDS EL K+ + HPK +L++RI +
Sbjct: 98 VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ + VIGV+FH+GS T+ + F A+++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ +G + M +LDIGGGF PG F E S+I A+ YFP+++ +
Sbjct: 217 CVFDMGTEVGFS-MYLLDIGGGF---PGSEDTKLKFEEITSVINPALDKYFPSDSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV----------RDELRE----YWINDGKYGSFGWL 329
+I+EPGR+ +AFTLA +I K+ DE E Y++NDG YGSF +
Sbjct: 270 RIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCI 329
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +M
Sbjct: 330 LYDHAHVKA---LLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386
Query: 390 GAYTTACGTNFNGFNTAAIPTYVVRSDP 417
GAYT A + FNGF I Y V S P
Sbjct: 387 GAYTVAAASTFNGFQRPNI--YYVMSRP 412
>sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
Length = 461
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 228/388 (58%), Gaps = 34/388 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG ++ + + + LP V P+YAVKCN AI++TLAA G+ FDCAS +EIQ
Sbjct: 38 DAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V +L V P+RIIYAN CK VS IKYAA+ GV + TFDS EL K+ + HPK +L++RI +
Sbjct: 98 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA LL A+ + V+GV+FH+GS T+ + F AI++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ A +G + M +LDIGGGF PG F E +I A+ YFP+++ +
Sbjct: 217 CVFDMGAEVGFS-MYLLDIGGGF---PGSEDVKLKFEEITGVINPALDKYFPSDSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV----------RDELRE----YWINDGKYGSFGWL 329
+I+EPGR+ +AFTLA +I K++ DE E Y++NDG YGSF +
Sbjct: 270 RIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCI 329
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +M
Sbjct: 330 LYDHAHVK---PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 386
Query: 390 GAYTTACGTNFNGFNTAAIPTYVVRSDP 417
GAYT A + FNGF I Y V S P
Sbjct: 387 GAYTVAAASTFNGFQRPTI--YYVMSGP 412
>sp|P00860|DCOR_MOUSE Ornithine decarboxylase OS=Mus musculus GN=Odc1 PE=1 SV=2
Length = 461
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 227/388 (58%), Gaps = 34/388 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG ++ + + + LP V P+YAVKCN AI+ TLAA+G+ FDCAS +EIQ
Sbjct: 38 DAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V L V +R+IYAN CK VS IKYAAS GV + TFDS EL K+ + HPK +L++RI +
Sbjct: 98 VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ + VIGV+FH+GS T+ + F A+++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ A +G + M +LDIGGGF PG F E S+I A+ YFP+++ +
Sbjct: 217 CVFDMATEVGFS-MHLLDIGGGF---PGSEDTKLKFEEITSVINPALDKYFPSDSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV----------RDELRE----YWINDGKYGSFGWL 329
+I+EPGR+ +AFTLA +I K+ DE E Y++NDG YGSF +
Sbjct: 270 RIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCI 329
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +M
Sbjct: 330 LYDHAHVKA---LLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM 386
Query: 390 GAYTTACGTNFNGFNTAAIPTYVVRSDP 417
GAYT A + FNGF I Y V S P
Sbjct: 387 GAYTVAAASTFNGFQRPNI--YYVMSRP 412
>sp|P27118|DCOR_CHICK Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2
SV=1
Length = 450
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 224/379 (59%), Gaps = 32/379 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG ++ + + LP V P+YAVKCN A+++TLA LG+ FDCAS +EIQ
Sbjct: 28 DAFYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 87
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V ++ V P+RIIYAN CK +S IK+AA+ GV + TFDS EL KI + HPK +LL+RI +
Sbjct: 88 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRITT 147
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ LA++GV+FH+GS T+ + F AI++A+
Sbjct: 148 D-DSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDAR 206
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ A LG M +LDIGGGF PG F E S+I A+ YFP ++ +
Sbjct: 207 CVFDMGAELGFN-MYLLDIGGGF---PGSEDVKLKFEEITSVINPALDKYFPLDS---EV 259
Query: 284 SVISEPGRFLADTAFTLATKVIGKR--------------VRDELREYWINDGKYGSFGWL 329
++I+EPGR+ +AFTLA +I K+ V D+ Y++NDG YGSF +
Sbjct: 260 TIIAEPGRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCI 319
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ K +L ++ Y +++GPTC +D++ +PEL+V DW++F +M
Sbjct: 320 LYDHAHVK---PVLQKRPKPDDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENM 376
Query: 390 GAYTTACGTNFNGFNTAAI 408
GAYT A + FNGF I
Sbjct: 377 GAYTVAAASTFNGFQRPTI 395
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 228/393 (58%), Gaps = 32/393 (8%)
Query: 37 EFMESII--LKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLA 94
+ ME II + + E + F+V DLG V+ + + + LP V P+YAVKCN +++ LA
Sbjct: 21 DLMEEIINEVSQTEDRDAFFVADLGDVVRKHLRFLKALPRVKPFYAVKCNSSKGVVKILA 80
Query: 95 ALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDK 154
LG+ FDCAS +EI+ V + V+P+RIIYAN CK +S IKYAA GV + TFD+ EL K
Sbjct: 81 ELGAGFDCASKTEIELVQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSK 140
Query: 155 IRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGS 214
+ + HP +++RI + D + L KFGA + LL A+ + VIGV+FH+GS
Sbjct: 141 VSRSHPNARMVLRIATD-DSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGS 199
Query: 215 EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIK 267
T+ A+ AI++A+ VFE A+ G KM +LDIGGGF PG F E A +I
Sbjct: 200 GCTDSKAYTQAISDARLVFEMASEFGY-KMWLLDIGGGF---PGTEDSKIRFEEIAGVIN 255
Query: 268 DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKR------VRDELRE------ 315
A+ YFP + + +I+EPGR+ +AF+LA VI K+ DE E
Sbjct: 256 PALDMYFPE---SSDVQIIAEPGRYYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIM 312
Query: 316 YWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQL 375
Y++NDG YGSF L + K IL + Y S+++GPTC +D++ QL
Sbjct: 313 YYVNDGVYGSFNCLVFDHAHPK---PILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQL 369
Query: 376 PELEVSDWLVFSDMGAYTTACGTNFNGFNTAAI 408
PEL V DWL+F +MGAYT A +NFNGF + +
Sbjct: 370 PELHVGDWLLFENMGAYTIAASSNFNGFQQSPV 402
>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-a PE=2 SV=1
Length = 460
Score = 281 bits (718), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 225/389 (57%), Gaps = 35/389 (8%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV D G ++ + + LP V P+YAVKCN AI++TL+ LG+ FDCAS +EIQ
Sbjct: 38 DAFYVADFGDIVKKHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQL 97
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKS 170
V ++ VSP+RIIYAN CK VS IKYAAS GV TFDS EL K+ + HP +L++RI +
Sbjct: 98 VQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157
Query: 171 PVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAK 230
D A L KFGA + LL A+ + +IGV+FH+GS T+ + A+++A+
Sbjct: 158 D-DSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDAR 216
Query: 231 TVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGHL 283
VF+ A LG M +LDIGGGF PG F E S+I A+ YFP ++ +
Sbjct: 217 CVFDMGAELGFN-MHLLDIGGGF---PGSEDVKLKFEEITSVINPALDKYFPADSG---V 269
Query: 284 SVISEPGRFLADTAFTLATKVIGKRV---------------RDELREYWINDGKYGSFGW 328
+I+EPGR+ ++FTLA +I K+V D+ Y++NDG YGSF
Sbjct: 270 KIIAEPGRYYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNC 329
Query: 329 LSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSD 388
+ + K +L + + Y S+++GPTC +D++ +LPEL+V DW++F +
Sbjct: 330 ILFDHAHVK---PVLTKKPKPDEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFEN 386
Query: 389 MGAYTTACGTNFNGFNTAAIPTYVVRSDP 417
MGAYT A + FNGF + Y V S P
Sbjct: 387 MGAYTVAAASTFNGFQRPTL--YYVMSRP 413
>sp|Q9UQW9|DCOR_SCHPO Ornithine decarboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=spe1 PE=2 SV=1
Length = 432
Score = 275 bits (703), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 218/369 (59%), Gaps = 23/369 (6%)
Query: 51 EPFYVLDLGVVISLYHQLI---SNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSE 107
+ F+V DL V Y QL+ + LP V P+YAVKCNP+P +L L G+ FDCAS E
Sbjct: 67 DAFFVADLNGV---YRQLLRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKGE 123
Query: 108 IQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIR 167
++ +L L VSPDRI+YAN CK +++++YAAS G+NL TFD+ EL K+++ HP LL+R
Sbjct: 124 LEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLR 183
Query: 168 IKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIA 227
I + D + L KFGA+ ++ LL A++ L V+GV+FH+GS + + AF AI
Sbjct: 184 ISTD-DSNSLCRLSLKFGASLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQ 242
Query: 228 EAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAGHLSVIS 287
++ VF+ G +LDIGGGF N F A +I+ A+ TYF + VIS
Sbjct: 243 RSRQVFDQGLERGFN-FDLLDIGGGFM-NDSFDGVADLIRSALDTYFDPS-----IRVIS 295
Query: 288 EPGRFLADTAFTLATKVIGKRVRDELRE--YWINDGKYGSFGWLSSEEV-----IAKCGA 340
EPGRF ++FTLA VI KR D+ + Y++NDG YGS + + + KCG+
Sbjct: 296 EPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGS 355
Query: 341 HILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLP-ELEVSDWLVFSDMGAYTTACGTN 399
+ + + +R ++GPTC ++D + LP EL V DW+ F D GAYT A +
Sbjct: 356 RFVYNDLVGTGQ-HRCFIWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASC 414
Query: 400 FNGFNTAAI 408
FNGF T+ I
Sbjct: 415 FNGFKTSRI 423
>sp|Q54UF3|DCOR_DICDI Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc
PE=3 SV=1
Length = 461
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 245/426 (57%), Gaps = 41/426 (9%)
Query: 18 ALVVRGERVPTITK-------DGGLLEFMESI--ILKRQELDEPFYVLDLGVVISLYHQL 68
+L+ R E++ + K D G + E I +L + + D F+V D+GV+I + +
Sbjct: 44 SLLSRCEKLDIVRKELDVKPWDQGKVTIQELITSLLDKTDRD-AFFVADVGVIIKQWQKW 102
Query: 69 ISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACK 128
+ NLP V PYYAVKCNP +L L ALG+N+DCAS +EI++VL L V P RIIYAN CK
Sbjct: 103 VKNLPNVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIESVLNLGVDPSRIIYANPCK 162
Query: 129 PVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANP 188
+S +K+A + V L TFD++ EL+KI K+ P+ EL++RI +P D + SKFG +
Sbjct: 163 QISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRI-APDDSKSVMRFGSKFGVHI 221
Query: 189 EEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLD 248
++ LL A+ L V+GV+FH+GS + D++ A+ K+VF+ A +L M ++ ++D
Sbjct: 222 DDCNDLLEMAKEMNLKVVGVSFHVGSGCQSGDSYADALIMVKSVFDMAKKLNM-ELTLVD 280
Query: 249 IGGGF--ACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIG 306
+GGGF + + F+ +I++ F + ++ +I+EPGR+ A + TLA VI
Sbjct: 281 VGGGFTGSDDEKFNAFTKVIREKTAELF-----SPNVKIIAEPGRYFAAQSHTLAVTVIS 335
Query: 307 K-------------RVRDELRE--YWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNN 351
K R + +R+ Y++ DG YGSF +++ AK +L S
Sbjct: 336 KRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFN--NTKFDYAKVEPLLLKP---STK 390
Query: 352 RTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTY 411
+ T+FGPTC ++D V Q+PEL++ DWL F DMGAYT A ++FNGF P Y
Sbjct: 391 QPTPCTLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGF--CPPPVY 448
Query: 412 VVRSDP 417
S P
Sbjct: 449 YYNSIP 454
>sp|P08432|DCOR_YEAST Ornithine decarboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPE1 PE=1 SV=1
Length = 466
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 228/383 (59%), Gaps = 25/383 (6%)
Query: 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
+ F++ DLG V L++ + LP + P+YAVKCNP+ +L LA LG NFDCAS EI
Sbjct: 84 ENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEID 143
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIK 169
VL++++SPDRI+YAN CK S I+YAAS V +TFD+++EL KI+K+HP+ +LL+RI
Sbjct: 144 RVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIA 203
Query: 170 SPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEA 229
+ D A+ L +K+G E V LL A + GL + GV+FH+GS A++ + + A+ +A
Sbjct: 204 TD-DSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDA 262
Query: 230 KTVFETAA-RLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISE 288
+TVF+ AA G+ +++LD+GGGF F E+ ++++ A++ +FP + +I+E
Sbjct: 263 RTVFDKAANEYGLPPLKILDVGGGFQFE-SFKESTAVLRLALEEFFP---VGCGVDIIAE 318
Query: 289 PGRFLADTAFTLATKVIGKRVRDELREY-WINDGKYGSFGWL--SSEEVIAKCGAHIL-- 343
PGR+ TAFTLA+ VI KR E + NDG YG+ + +E + H L
Sbjct: 319 PGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEF 378
Query: 344 --------ASASHSNNRT-----YRSTVFGPTCAAVDKVFTGHQLP-ELEVSDWLVFSDM 389
+ S N+T Y+ +++GPTC +D + + + ++ V DW F +
Sbjct: 379 HYDDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPAL 438
Query: 390 GAYTTACGTNFNGFNTAAIPTYV 412
GAYT++ T FNGF A Y+
Sbjct: 439 GAYTSSAATQFNGFEQTADIVYI 461
>sp|P14019|DCOR_CRIGR Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3
Length = 455
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 224/386 (58%), Gaps = 35/386 (9%)
Query: 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQA 110
+ FYV DLG V+ + + + LP V P+YAVKCN A++ TLAA+ DCAS +EIQ
Sbjct: 37 DAFYVADLGDVLKKHLRWLKALP-VTPFYAVKCNDSRALVNTLAAI--TVDCASKTEIQL 93
Query: 111 VLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKC-ELLIRIK 169
V L V P+R+IYAN CK VS IKYAAS GV + TFDS EL K+ + HPK +L++RI
Sbjct: 94 VQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKVTKLVLRIA 153
Query: 170 SPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEA 229
+ D A L KFGA LL A+ + VIGV+FH+GS T+ + F A+++A
Sbjct: 154 TD-DSKAVCRLSVKFGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSDA 212
Query: 230 KTVFETAARLGMTKMRVLDIGGGFACNPG-------FHEAASIIKDAIQTYFPNETAAGH 282
+ VF+ +G + M +LDIGGGF PG F E S+I A+ YFP ++
Sbjct: 213 RCVFDMGTEVGFS-MYLLDIGGGF---PGSEDTKLKFEEITSVINPALDKYFPPDSG--- 265
Query: 283 LSVISEPGRFLADTAFTLATKVIGKRV-------RDELRE----YWINDGKYGSFGWLSS 331
+ VI+EPGR+ +AFTLA +I K++ DE E Y++NDG YGSF +
Sbjct: 266 VRVIAEPGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILY 325
Query: 332 EEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGA 391
+ K +L + + Y S+++GPTC +D++ LPE+ V DW++F +MGA
Sbjct: 326 DHAHVK---PLLPKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGA 382
Query: 392 YTTACGTNFNGFNTAAIPTYVVRSDP 417
YT A + FNGF +I Y V S P
Sbjct: 383 YTVAAASTFNGFQRPSI--YYVMSRP 406
>sp|P27121|DCOR_NEUCR Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=spe-1
PE=2 SV=1
Length = 484
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 221/401 (55%), Gaps = 39/401 (9%)
Query: 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
++ F+V DLG V + + NLP V P+YAVKC+P+ +L+ LAALG+ FDCAS +EI+
Sbjct: 82 EDTFFVADLGEVYRQHLRWKLNLPRVKPFYAVKCHPDERLLQLLAALGTGFDCASKAEIE 141
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIK 169
VL + V P RIIYA CK S+++Y A GV TFD+ EL KI + +P EL +RI
Sbjct: 142 QVLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRIL 201
Query: 170 SPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEA 229
+ D + KFGA+ + LLG A+ GL V+GV+FH+GS A++ AF A+ +A
Sbjct: 202 TD-DSSSLCRFSMKFGASLDSTDGLLGLARQLGLNVVGVSFHVGSGASDPTAFLKAVQDA 260
Query: 230 KTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEP 289
VF+ AA G + ++ LD+GGGF + F + A++++ A+ YFP T +++I+EP
Sbjct: 261 HVVFQQAAAYGYS-LKTLDVGGGFCSDDSFEQMANVLRAALDEYFPAHTG---VNLIAEP 316
Query: 290 GRFLADTAFTLATKVIGKRV-----------------------RDELREYWINDGKYGSF 326
GR+ A +AFTLA +I +R D ++NDG YG+F
Sbjct: 317 GRYYASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYVNDGLYGNF 376
Query: 327 GWLSSEEV-----IAKCGAHIL----ASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPE 377
+ + I + G + A+ S +++GPTC +D++ + E
Sbjct: 377 SSIMFDHQHPVAKILRAGGRTMYNSVAAHESSAEDAIEYSIWGPTCDGIDRITESIRFRE 436
Query: 378 -LEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVVRSDP 417
L+V DWL F DMGAYT T FNGF+ YV S+P
Sbjct: 437 ILDVGDWLYFEDMGAYTKCSATTFNGFSNEHDVIYVC-SEP 476
>sp|P41931|DCOR_CAEEL Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=3
SV=2
Length = 422
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 218/390 (55%), Gaps = 34/390 (8%)
Query: 47 QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPS 106
QE D F ++DL +I + LPM+ P+YAVKCN + ++ LA+LG FDCAS
Sbjct: 36 QENDSSFMLVDLDKIIERFQLWKRELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKD 95
Query: 107 EIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLI 166
EI V+ VS +RIIYAN CK S I +A V + TFD+ +EL KI K HP E+++
Sbjct: 96 EIDIVMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMIL 155
Query: 167 RIKSPVDGGARYPLDSKFGANPEEVA-HLLGAAQASGLAVIGVAFHIGSEATNLDAFHAA 225
RI + D A PL+ KFGA+P A LL A G+ V+G++FH+GS + A+ A
Sbjct: 156 RI-AVSDPTATCPLNLKFGADPIIAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNA 214
Query: 226 IAEAKTVFETAARLGMTKMRVLDIGGGFAC----NPGFHEAASIIKDAIQTYFPNETAAG 281
+ AK + E LG KM ++D+GGGF NP F + A I+DA+ +FP+
Sbjct: 215 LQHAKNLCEIGEGLGF-KMDIIDMGGGFPGAEHHNP-FEKIAETIRDALDEFFPDTNK-- 270
Query: 282 HLSVISEPGRFLADTAFTL------ATKVIGKRVRDELRE-------YWINDGKYGSFGW 328
+I+EPGRF A F+L AT+V ++ + ++ Y+INDG YGSF
Sbjct: 271 --RLIAEPGRFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNC 328
Query: 329 LSSEEVIAKCGAHILASASHSNNRT--YRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVF 386
+ + AH + S +R + ST++GPTC ++D V +P++ V +WL +
Sbjct: 329 ILFDH------AHPIGSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYY 382
Query: 387 SDMGAYTTACGTNFNGFNTAAIPTYVVRSD 416
DMGAYT A T FNGF + +P YV+ +
Sbjct: 383 PDMGAYTLAAATTFNGF-SKPVPMYVMSEE 411
>sp|P78599|DCOR_CANAL Ornithine decarboxylase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SPE1 PE=3 SV=1
Length = 473
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 230/403 (57%), Gaps = 41/403 (10%)
Query: 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
++ F+V DLG +I+ +Q LPMV PYYAVKCN P IL TL+ LG NFDCAS +EI
Sbjct: 74 EDSFFVCDLGEIINSVNQWQQILPMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEID 133
Query: 110 AVLALSV--SPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIR 167
VL+L + + +RIIYAN CK S I++AA VNLTT D++ EL K+ K+HP C++LIR
Sbjct: 134 LVLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILIR 193
Query: 168 IKSPVDGGARYPLDSKFGANPEE-VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAI 226
+ + D A+ L +KFG + + +L A+ GL V GVAFH+GS A + + + AI
Sbjct: 194 LITD-DSTAQCQLSTKFGCDLNTAIGEILPKAKELGLQVHGVAFHVGSGAKDFSSIYQAI 252
Query: 227 AEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNE-TAAGHLSV 285
+++ +F+ +G T ++LDIGGGF F +++ ++K A++ +FP E + + +
Sbjct: 253 KDSRILFDEMLSMGFTP-KLLDIGGGFE-RETFPQSSQMVKFALEKFFPIEFSQSNEIKF 310
Query: 286 ISEPGRFLADTAFTLATKVIGKR--------VRDELRE---YWINDGKYGSFGWLSSEEV 334
I+EPGRF+ AFTL T +I +R +++ +INDG YG+ + +
Sbjct: 311 IAEPGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNCILFDHQ 370
Query: 335 IAKCGAHILASASH--------------------SNNRTYRSTVFGPTCAAVDKVFTGHQ 374
K ++L + + + ++ +++GPTC +D V + +
Sbjct: 371 TPK--VYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVSSLAK 428
Query: 375 LPE-LEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVVRSD 416
L + ++V DWL F ++GAYT+ T FNG ++ T V S+
Sbjct: 429 LSKNVQVGDWLFFENVGAYTSCASTKFNGLSSGETKTLYVNSN 471
>sp|P40807|DCOR1_DROME Ornithine decarboxylase 1 OS=Drosophila melanogaster GN=Odc1 PE=1
SV=3
Length = 394
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 215/374 (57%), Gaps = 34/374 (9%)
Query: 47 QELDEPFYVLDLGVV---ISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCA 103
Q LD+ + DL V + L+ +L LP + P+YAVKCN +P ++ LA LG+ FDCA
Sbjct: 27 QRLDQALNICDLSSVERKLRLWQKL---LPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCA 83
Query: 104 SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCE 163
S +E++ VL VSP+RII+AN C+PVSH++YA V+ T D+ E+ K+ +P
Sbjct: 84 SKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSN 143
Query: 164 LLIRIKSPVDGGARYPLDSKFGANPE-EVAHLLGAAQASGLAVIGVAFHIGSEATNLDAF 222
L++R KS A+ PL KFG + + + A L+ A++ L V G +FH+GS + L A+
Sbjct: 144 LIVRFKSEAK-EAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAY 202
Query: 223 HAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPG-----FHEAASIIKDAIQTYFPNE 277
AI +AK +F+ A LG M LDIGGGF PG F + A + ++Q +FP+E
Sbjct: 203 DRAIKKAKNLFKFGALLGYD-MDFLDIGGGF---PGSDDVKFEKIAESVNTSVQRHFPDE 258
Query: 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKR-VRDELRE-----YWINDGKYGSFGWL-- 329
+ +I+EPGRF A TL K+ KR +R+E + Y++NDG YGSF +
Sbjct: 259 ----RVHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILY 314
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
+ VIA+ H L +A + +S ++GP+C A+DK+ LP L D L F +M
Sbjct: 315 DHQVVIAE---HYLDNAESLPH--LKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNM 369
Query: 390 GAYTTACGTNFNGF 403
GAYT + FNGF
Sbjct: 370 GAYTMPIASAFNGF 383
>sp|O35484|AZIN1_MOUSE Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1
Length = 448
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 203/380 (53%), Gaps = 24/380 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG ++ + Q + + + P+Y VKCN PA+LE LAALG+ F C+S +E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
L VSP+ II+ + CK VS IKYAA VGVN+ T D+ EL KI + HP ++L+ I +
Sbjct: 100 ELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
+ G + KFG + HLL A+ + +IGV FH+ S + A+++A+ V
Sbjct: 160 NIGGE-DGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARCV 218
Query: 233 FETAARLGMTKMRVLDIGGGF-ACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGR 291
F+ A G T M +LDIGGGF E +I + YFP + + +ISEPG
Sbjct: 219 FDMAGEFGFT-MNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSG---IQIISEPGS 274
Query: 292 FLADTAFTLATKVIGKRV--RDELRE-------------YWINDGKYGSFGWLSSEEVIA 336
+ +AFTLA +I K+V D+ Y++NDG YGSF SE++
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNT 334
Query: 337 KCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTAC 396
H + + S+++GP+C +D++ LPEL V DWL+F +MGA +
Sbjct: 335 IPEVH---KKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHE 391
Query: 397 GTNFNGFNTAAIPTYVVRSD 416
+ FN F AI + SD
Sbjct: 392 PSAFNDFQRPAIYFMMSFSD 411
>sp|Q5R7K3|AZIN1_PONAB Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1
Length = 448
Score = 232 bits (591), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 203/380 (53%), Gaps = 24/380 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG ++ + Q + + + P+Y VKCN PA+LE LAALG+ F C+S +E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
L V P+ IIY + CK VS IKYAA VGVN+ T D+ EL KI + HP ++L+ I +
Sbjct: 100 ELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
+ G + KFG + HLL A+ + +IGV FH+ S + A+++A+ V
Sbjct: 160 NIGGEEG-NMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCV 218
Query: 233 FETAARLGMTKMRVLDIGGGFACNP-GFHEAASIIKDAIQTYFPNETAAGHLSVISEPGR 291
F+ A +G T M +LDIGGGF E +I + YFP + + +ISEPG
Sbjct: 219 FDMAGEIGFT-MNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSG---VKIISEPGS 274
Query: 292 FLADTAFTLATKVIGKRVRDELR---------------EYWINDGKYGSFGWLSSEEVIA 336
+ +AFTLA +I K+V + + Y++NDG YGSF SE++
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNT 334
Query: 337 KCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTAC 396
H + + S+++GP+C +D++ LPEL V DWL+F +MGA +
Sbjct: 335 IPEVH---KKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHE 391
Query: 397 GTNFNGFNTAAIPTYVVRSD 416
+ FN F AI + SD
Sbjct: 392 PSAFNDFQRPAIYYMMSFSD 411
>sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2
Length = 448
Score = 231 bits (589), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 203/380 (53%), Gaps = 24/380 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG ++ + Q + + + P+Y VKCN PA+LE LAALG+ F C+S +E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMALVQ 99
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
L V P+ IIY + CK VS IKYAA VGVN+ T D+ EL KI + HP ++L+ I +
Sbjct: 100 ELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIATED 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
+ G + KFG + HLL A+ + +IGV FH+ S + A+++A+ V
Sbjct: 160 NIGGEEG-NMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCV 218
Query: 233 FETAARLGMTKMRVLDIGGGFACNP-GFHEAASIIKDAIQTYFPNETAAGHLSVISEPGR 291
F+ A +G T M +LDIGGGF E +I + YFP + + +ISEPG
Sbjct: 219 FDMAGEIGFT-MNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSG---VKIISEPGS 274
Query: 292 FLADTAFTLATKVIGKRVRDELR---------------EYWINDGKYGSFGWLSSEEVIA 336
+ +AFTLA +I K+V + + Y++NDG YGSF SE++
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNT 334
Query: 337 KCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTAC 396
H + + S+++GP+C +D++ LPEL V DWL+F +MGA +
Sbjct: 335 IPEVH---KKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHE 391
Query: 397 GTNFNGFNTAAIPTYVVRSD 416
+ FN F AI + SD
Sbjct: 392 PSAFNDFQRPAIYYMMSFSD 411
>sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1
Length = 460
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 202/380 (53%), Gaps = 26/380 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG ++ + + LP V P+YAVKCN P +L+ LA LG F CA+ +E++ V
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQ 100
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
+ + +II AN CK ++ IKYAA G+ L +FD+ EL K+ K HP ++++ I +
Sbjct: 101 HIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATD- 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
D + L KFG + + HLL A+ + V+GV+FHIGS + A+ +IA+A+ V
Sbjct: 160 DSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLV 219
Query: 233 FETAARLGMTKMRVLDIGGGFACNPG----FHEAASIIKDAIQTYFPNETAAGHLSVISE 288
FE LG KM VLD+GGGF G F E AS+I A+ YFP + + +E
Sbjct: 220 FEMGTELG-HKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCG---VDIFAE 275
Query: 289 PGRFLADTAFTLATKVIGKR---VRDELRE-----------YWINDGKYGSFGWLSSEEV 334
GR+ +AFT+A +I K+ + RE Y +++G YG F + + +
Sbjct: 276 LGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNI 335
Query: 335 IAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTT 394
C IL + Y S+++GP D V G LP+L V DWLVF +MGAYT
Sbjct: 336 ---CPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTV 392
Query: 395 ACGTNFNGFNTAAIPTYVVR 414
G+ F G I + R
Sbjct: 393 GMGSPFWGTQACHITYAMSR 412
>sp|Q63764|AZIN1_RAT Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1
Length = 448
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 193/355 (54%), Gaps = 24/355 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG ++ + Q + + + P+Y VKCN PA+LE LAALG+ F C++ +E+ V
Sbjct: 40 FFVGDLGKIVKKHSQWQNVVAQIKPFYMVKCNSTPAVLEILAALGTGFACSTKNEMALVQ 99
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
L VSP+ IIY + CK S IKYAA VGVN+ T D+ EL KI + HP ++L+ I +
Sbjct: 100 ELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIATED 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
+ G + KFG + HLL A+ + +IGV FHI S + A+++A+ V
Sbjct: 160 NIGGE-DGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARCV 218
Query: 233 FETAARLGMTKMRVLDIGGGF-ACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGR 291
F+ A G T M +LDIGGGF E +I + YFP + + +ISEPG
Sbjct: 219 FDMAGEFGFT-MNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSG---IQIISEPGS 274
Query: 292 FLADTAFTLATKVIGKRV--RDELRE-------------YWINDGKYGSFGWLSSEEVIA 336
+ +AFTLA +I K+V D+L Y++NDG YGSF SE++
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNT 334
Query: 337 KCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGA 391
H + + S+++GP+C +D++ LPEL V DWL+F +MGA
Sbjct: 335 VPEVH---KKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGA 386
>sp|P27116|DCOR_LEIDO Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1
Length = 707
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 208/429 (48%), Gaps = 77/429 (17%)
Query: 48 ELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSE 107
E ++PFY++DLG V+ + LPMV PY+AVK NP+PA+LE L+ALG+ FDCAS E
Sbjct: 254 EPEDPFYIIDLGRVVEQMARWRHELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEE 313
Query: 108 IQAVLA--LSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELL 165
I VL L SPD II+AN CK + ++ A + GV T D+ E++KI + P +
Sbjct: 314 IHMVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAI 373
Query: 166 IRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAA 225
IRIK+ D A+ +KFGA E+V LL AA+ + V GV+FH+GS + A+ +A
Sbjct: 374 IRIKTN-DSKAQCSFSTKFGAPLEDVEGLLEAARQFNVTVCGVSFHVGSGNDDQSAYVSA 432
Query: 226 IAEAKTVFETAARLGMTKMRVLDIGGGF--------ACNPGFHEAASIIKDAIQTYFPNE 277
+ +A VF+ A + G K +LDIGGGF + N F A I+ + F
Sbjct: 433 VRDAYQVFQQAVQYGF-KCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELF--- 488
Query: 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKRV------------------RDELRE--YW 317
G +++ISEPGR+ + L V R DE E Y+
Sbjct: 489 -GGGDVTIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEYQYY 547
Query: 318 INDGKYGSF----------------------GWLSSEEVIAKCGAH-------------- 341
+NDG Y SF G S E A C
Sbjct: 548 VNDGLYHSFNCILFDHAHPTLLLLNDGDGADGVESGTEAAAVCSEEEGETSLSGPLANDP 607
Query: 342 ILASASHSNNRTYR-----STVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTAC 396
+ SA R +T+FGPTC ++D + PE+++ DWL+ DMG+YTTA
Sbjct: 608 LFMSAWDRRRSFARRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAA 667
Query: 397 GTNFNGFNT 405
FNGF T
Sbjct: 668 AGFFNGFAT 676
>sp|P49725|DCOR_PANRE Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1
Length = 435
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 209/377 (55%), Gaps = 33/377 (8%)
Query: 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
D+PF V+++ +++ Q +P V P YAVKCN + +L TLA LG FDCAS +EI+
Sbjct: 44 DDPFVVMNVSTIMAKVIQWQRTMPRVAPCYAVKCNDDKVLLRTLADLGMGFDCASKAEIE 103
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIK 169
V+ L V P++I+YAN CK I +A + GV TFDS++EL KI++ H L++RI
Sbjct: 104 KVIGL-VGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRI- 161
Query: 170 SPVDGGARYPLDSKFGANPEEVA-HLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAE 228
S D A+ L KFG +PE VA LL A G+ VIG++FH+GS F A+
Sbjct: 162 SVSDPTAQCQLGIKFGCDPETVAPKLLRKAADMGMNVIGISFHVGSGCNEPATFRTALEY 221
Query: 229 AKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA-------ASIIKDAIQTYFPNETAAG 281
A+ +F+ LG++ M +LDIGGGF PG A A++I A++ FP ++
Sbjct: 222 ARGLFDLGISLGLS-MTLLDIGGGF---PGVDTAHISLDACAAVINPALEELFPLDSCP- 276
Query: 282 HLSVISEPGRFLADTAFTLATKVIG----------KRVRDELRE---YWINDGKYGSFGW 328
+ VI+EPGR+ A A ++ T VI ++ D R+ Y++NDG YGSF
Sbjct: 277 DVEVIAEPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYYMNDGVYGSFNC 336
Query: 329 LSSEEVIAKCGAHILASASH-SNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFS 387
++ + A H ++ + V+GPTC +D+V +P L DWL +
Sbjct: 337 ----KLFDHYQPRGMPLAEHDADEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYP 392
Query: 388 DMGAYTTACGTNFNGFN 404
DMGAYT+ + FNGF+
Sbjct: 393 DMGAYTSVAASTFNGFD 409
>sp|Q8BVM4|ADC_MOUSE Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1
Length = 459
Score = 224 bits (571), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 200/359 (55%), Gaps = 25/359 (6%)
Query: 53 FYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVL 112
F+V DLG V+ + + +LP V P+YAV CN +L+ LA LG F CA+ +E++ V
Sbjct: 41 FFVADLGAVVRKHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMELVQ 100
Query: 113 ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPV 172
+ V +II AN CK V+ IKYAA GV L +FD+ EL K+ K HP ++++ I +
Sbjct: 101 HIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQ- 159
Query: 173 DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTV 232
D + L +FGA+ + HLL A+ S + V+GV+FHIGS + A+ +IA+A+ V
Sbjct: 160 DSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARLV 219
Query: 233 FETAARLGMTKMRVLDIGGGFACNPG----FHEAASIIKDAIQTYFPNETAAGHLSVISE 288
F+ LG T M +LD+GGGF G F E AS+I A+ YFP + +++E
Sbjct: 220 FQMGEELGHT-MNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCG---VDILAE 275
Query: 289 PGRFLADTAFTLATKVIGKR-VRDEL-RE-----------YWINDGKYGSFGWLSSEEVI 335
GR+ +AFT+A ++ KR V D+ RE Y++++G YG F + +
Sbjct: 276 LGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFDNT- 334
Query: 336 AKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTT 394
C L ++ Y S+++GP D V G LP+L+V DWLVF +MGAYT
Sbjct: 335 --CPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYTV 391
>sp|P40808|DCOR2_DROME Ornithine decarboxylase 2 OS=Drosophila melanogaster GN=Odc2 PE=1
SV=2
Length = 393
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 216/376 (57%), Gaps = 35/376 (9%)
Query: 47 QELDEPFYVLDLGVV---ISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCA 103
+ LD+ + DL + + L+H+L +P + P+YAVKCN +P +++ LA LG+ FDCA
Sbjct: 27 EHLDQALNICDLSSLERKLRLWHKL---MPRIEPHYAVKCNDDPVVVKFLADLGTGFDCA 83
Query: 104 SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCE 163
S +E++ VL L VSP+RII+A+ C+P SH++YA V T D+ E+ K+RK +P
Sbjct: 84 SKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSN 143
Query: 164 LLIRIKSPVDGGARYPLDSKFGAN-PEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAF 222
L++R KS A PL K+G + + A L+ A+A GL V G +FH+GS + ++A+
Sbjct: 144 LIVRFKSEAK-KALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAY 202
Query: 223 HAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPG-----FHEAASIIKDAIQTYFPNE 277
AI +A+ +F+ +G KM +LD+GGGF PG F E A + +++ FP++
Sbjct: 203 DRAIEKAENIFKVGEMIG-HKMELLDVGGGF---PGIDDEMFEEIAQSVNTSVELRFPDK 258
Query: 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKR-VRD-----ELREYWINDGKYGSFG--WL 329
+ +ISEPGRF + A+TL KV KR VR + Y++NDG +G+F +
Sbjct: 259 ----RIRIISEPGRFFVEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFY 314
Query: 330 SSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389
EEV A L + +S ++GP+C A+DK+ + LP L D L F +M
Sbjct: 315 YPEEV-----APELYLDEAESLPKLKSVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNM 368
Query: 390 GAYTTACGTNFNGFNT 405
GAYT + FNGF+
Sbjct: 369 GAYTMPIASPFNGFDV 384
>sp|O50657|DCLO_SELRU Lysine/ornithine decarboxylase OS=Selenomonas ruminantium GN=ldc
PE=1 SV=1
Length = 393
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 191/372 (51%), Gaps = 23/372 (6%)
Query: 52 PFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAV 111
PF V L V Y + +LP +YA+K NP P IL LA LGS+FD AS E++ +
Sbjct: 21 PFLVASLDKVEENYQFMRRHLPRAGVFYAMKANPTPEILSLLAGLGSHFDVASAGEMEIL 80
Query: 112 LALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSP 171
L V ++IYAN K +K AA V TFD E+DK+ K P ++L+RI +
Sbjct: 81 HELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRI-AV 139
Query: 172 VDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKT 231
+ A L++KFGA EE LL AAQ +GL +G+ FH+GS++ + A+ A+ A+
Sbjct: 140 RNNKALVDLNTKFGAPVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALLVARR 199
Query: 232 VFETAARLGMTKMRVLDIGGGF------ACNPGFHEAASIIKDAIQTYFPNETAAGHLSV 285
+F+ A +GM + LDIGGGF N I I FP+ +V
Sbjct: 200 LFDEAEEMGM-HLTDLDIGGGFPVPDAKGLNVDLAAMMEAINKQIDRLFPDT------AV 252
Query: 286 ISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILAS 345
+EPGR++ TA L T VIG + R E Y +++G YG F + + + L
Sbjct: 253 WTEPGRYMCGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCFSGIMYDH-----WTYPLHC 307
Query: 346 ASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNT 405
N + ST GP+C +D ++ PEL++ D ++ ++MG+YT+ T FNGF
Sbjct: 308 FGKGNKKP--STFGGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGFYL 365
Query: 406 AAIPTYVVRSDP 417
A PT + P
Sbjct: 366 A--PTIIFEDQP 375
>sp|Q9ZME5|DCDA_HELPJ Diaminopimelate decarboxylase OS=Helicobacter pylori (strain J99)
GN=lysA PE=3 SV=1
Length = 405
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 150/342 (43%), Gaps = 36/342 (10%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YA+K N +IL LA LGS DC S EIQ L + P +I+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLANLGSGADCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALK 102
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
+ + +S EL I + K + IRI +D +P ++KFG
Sbjct: 103 LNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVEE 161
Query: 189 EEVAHL-LGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVL 247
+E + L A +++ L + V FHIGS+ +LD A + + ++ LG+ +R
Sbjct: 162 KEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLDPITEASQKVAKIAKSLIALGID-LRFF 220
Query: 248 DIGGGFACNPGFHEAASIIK--DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVI 305
D+GGG + +E IK D Q N L++I EPGR + + L T+V+
Sbjct: 221 DVGGGIGVS---YENEETIKLYDYAQGIL-NSLQGLDLTIICEPGRSIVAESGELITQVL 276
Query: 306 GKRVRDELREYWINDGKYGSFGWLS------SEEVIAKCGAHILASASHSNNRTYRSTVF 359
++ + + + + I D F S + VI CG ++ V
Sbjct: 277 YEK-KAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVITPCGGREISPCD----------VV 325
Query: 360 GPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
GP C + D LPELE D L +GAY ++ + +N
Sbjct: 326 GPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYN 367
>sp|B4XMC6|DCDA_HELPX Diaminopimelate decarboxylase OS=Helicobacter pylori GN=lysA PE=1
SV=1
Length = 405
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 26/337 (7%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YA+K N +IL LA L S DC S EIQ L + P RI+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALK 102
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
+ + +S EL I + K + IRI +D +P ++KFG
Sbjct: 103 LNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVGE 161
Query: 189 EEVAHL-LGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVL 247
+E + L A +++ L + V FHIGS+ +L+ A + + ++ LG+ +R
Sbjct: 162 KEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGID-LRFF 220
Query: 248 DIGGGFACNPGFHEAASIIK--DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVI 305
D+GGG + +E IK D Q N L++I EPGR + + L T+V+
Sbjct: 221 DVGGGIGVS---YENEETIKLYDYAQGIL-NALQGLDLTIICEPGRSIVAESGELITQVL 276
Query: 306 GKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYR-STVFGPTCA 364
++ + + + + I D F L AK H + + S R V GP C
Sbjct: 277 YEK-KAQNKRFVIVDAGMNDF--LRPSLYHAK---HAIRVITPSKGREISPCDVVGPVCE 330
Query: 365 AVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
+ D LPELE D + +GAY ++ + +N
Sbjct: 331 SSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYN 367
>sp|P56129|DCDA_HELPY Diaminopimelate decarboxylase OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=lysA PE=3 SV=1
Length = 405
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 150/337 (44%), Gaps = 26/337 (7%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YA+K N +IL LA L S DC S EI L + P RI+++ K I+ A
Sbjct: 43 YALKANSNLSILSLLAHLESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALK 102
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
+ + +S EL I + K + IRI +D +P ++KFG
Sbjct: 103 LNILFLNVESFMELTTIETIAQSLGIKARISIRINPNIDAKT-HPYISTGLKENKFGVGE 161
Query: 189 EEVAHL-LGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVL 247
+E + L A +++ L + V FHIGS+ ++L+ A + + ++ LG+ +R
Sbjct: 162 KEALEMFLWAKKSAFLEPVSVHFHIGSQLSDLEPIIEASQKVAKIAKSLIALGID-LRFF 220
Query: 248 DIGGGFACNPGFHEAASIIK--DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVI 305
D+GGG + +E IK D Q N L++I EPGR + + L T+V+
Sbjct: 221 DVGGGIGVS---YENEETIKLYDYAQGIL-NSLQGLDLTIICEPGRSIVAESGELITQVL 276
Query: 306 GKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYR-STVFGPTCA 364
++ + + + + + D F L AK H + + S R V GP C
Sbjct: 277 YEK-KAQNKRFVVVDAGMNDF--LRPSLYHAK---HAIRVITPSKGREISPCDVVGPVCE 330
Query: 365 AVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
+ D LPELE D LV +GAY ++ + +N
Sbjct: 331 SSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYN 367
>sp|O67262|DCDA_AQUAE Diaminopimelate decarboxylase OS=Aquifex aeolicus (strain VF5)
GN=lysA PE=1 SV=1
Length = 420
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 160/387 (41%), Gaps = 30/387 (7%)
Query: 31 KDGGLLEFMESIILKR--QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPA 88
+DG L F+E + LK Q P YV + + P YAVK N P
Sbjct: 14 RDGEL--FIEGVSLKELAQTFGTPLYVYSSNFIKERFEAYRKAFPDALICYAVKANFNPH 71
Query: 89 ILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148
+++ L LG+ D S E+ + P+RI+YA K + A + + +S
Sbjct: 72 LVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVES 131
Query: 149 IQELDKIR----KWHPKCELLIRIKSPVDGGARYPL------DSKFGANPEEVAHLLG-A 197
QELD + K K + IR+ VD +P SKFG + E A
Sbjct: 132 RQELDVLNEIAGKLGKKARIAIRVNPDVDPKT-HPYIATGMQKSKFGVDIREAQKEYEYA 190
Query: 198 AQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC-- 255
++ L ++G+ HIGS+ ++ + A+ + +++E+ + G ++ LDIGGG
Sbjct: 191 SKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFD-IKYLDIGGGLGIKY 249
Query: 256 NPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE-LR 314
P E A + A +I EPGR + A L T+V + ++D+ +
Sbjct: 250 KPEDKEPAPQDLADLLKDLLENVKA---KIILEPGRSIMGNAGILITQV--QFLKDKGSK 304
Query: 315 EYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQ 374
+ I D S I HI+ + + + + GP C D + +
Sbjct: 305 HFIIVDAGMNDLIRPS----IYNAYHHIIPVETKERKKVV-ADIVGPICETGDFLALDRE 359
Query: 375 LPELEVSDWLVFSDMGAYTTACGTNFN 401
+ E++ ++L GAY A +++N
Sbjct: 360 IEEVQRGEYLAVLSAGAYGFAMSSHYN 386
>sp|O05321|DCDA_PSEFL Diaminopimelate decarboxylase OS=Pseudomonas fluorescens GN=lysA
PE=3 SV=1
Length = 416
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 151/345 (43%), Gaps = 43/345 (12%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
+AVK N +L LA LG+ FD S E++ VLA S D+I+++ K ++ A
Sbjct: 57 FAVKANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALE 116
Query: 139 VGVNLTTFDSIQELDK-----IRKWHPKCELLIRIKSPVDGGARYPL------DSKFG-- 185
VGV+ +S EL + + + +R+ VD G +P ++KFG
Sbjct: 117 VGVHCFNIESTDELGSRLQIVAAELGVRAPISLRVNPDVDAGT-HPYISTGLKENKFGIA 175
Query: 186 -ANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKM 244
A+ E+V + AAQ L V+GV HIGS+ T L+ F A+ + + G+ +
Sbjct: 176 IADAEDV--YVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIY-L 232
Query: 245 RVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAGH-LSVISEPGRFLADTAFTLATK 303
R +D+GGG E ++ D I+ E G L+++ EPGR++ A L T+
Sbjct: 233 RHIDLGGGVGVRY-RDEEPPLVADYIKAV--RERLDGRDLALMFEPGRYIVANAGVLLTQ 289
Query: 304 VIGKRVRDELREYWINDGKYGSF-------GWLSSEEVIAKCGAHILASASHSNNRTYRS 356
V + E +++ I D W+ V + + R+Y
Sbjct: 290 VEYLK-HTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPR----------DTAARSY-- 336
Query: 357 TVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
+ GP C D + G +L LE D L GAY +N+N
Sbjct: 337 DIVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYN 380
>sp|Q9JXM2|DCDA_NEIMB Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=lysA PE=3 SV=1
Length = 414
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 155/375 (41%), Gaps = 36/375 (9%)
Query: 52 PFYVLDLGVVISLYHQLISNLPMVHPY--YAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
P YV + + + ++P YAVK N +I++ A+LGS FD S E+
Sbjct: 20 PLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELA 79
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPK----CELL 165
VLA + I++ K + I++A + GV +SI E+D+I+K + +
Sbjct: 80 RVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVS 139
Query: 166 IRIKSPVDGGARYPLDSKFGANPEEVAHLLG------AAQASGLAVIGVAFHIGSEATNL 219
+RI VD + + AN +A+ AAQ L +IG+ HIGS+ T+L
Sbjct: 140 LRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPNLKIIGIDCHIGSQLTDL 199
Query: 220 DAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC------NPGFHEAASIIKDAIQTY 273
A + + A G+ + LD+GGG P A ++ I T
Sbjct: 200 SPLVEACERILILVDALAAEGIV-LEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGTR 258
Query: 274 FPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEE 333
L +I EPGR L A +L T+V + +E + + + D + +
Sbjct: 259 --------RLKLILEPGRSLVGNAGSLLTRVEFVKYGEE-KNFVMVDAAMNDLMRPALYD 309
Query: 334 VIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGH-QLPELEVSDWLVFSDMGAY 392
H + + + T + + GP C D F G + E D L+ GAY
Sbjct: 310 AY-----HHIEAVETKDIATLTANIVGPICETGD--FLGKDRTIACEEGDLLLIRSAGAY 362
Query: 393 TTACGTNFNGFNTAA 407
+ +N+N N AA
Sbjct: 363 GASMASNYNARNRAA 377
>sp|Q9PII5|DCDA_CAMJE Diaminopimelate decarboxylase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=lysA PE=3 SV=1
Length = 402
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 158/380 (41%), Gaps = 39/380 (10%)
Query: 46 RQELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGSNFDCA 103
+QE + PFY+ + + + L +YAVK N ++L+ LA L S FDC
Sbjct: 7 KQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCV 66
Query: 104 SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS---VGVNLTTFDSIQELDKI-RKWH 159
S E++ L +II++ K ++ A + +NL + + L+ + ++ +
Sbjct: 67 SIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELN 126
Query: 160 PKCELLIRIKSPVDGGARYPL------DSKFGANPEEVAHL-LGAAQASGLAVIGVAFHI 212
K + IR+ VD +P ++KFG + + L A +S L +GV FHI
Sbjct: 127 LKARISIRVNPNVDAKT-HPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHI 185
Query: 213 GSEATNLDAFHAAIA-EAKTVFETAARLGMTKMRVLDIGGGFA-------CNPGFHEAAS 264
GS+ ++ H A A AK V E A ++ DIGGG C P ++ A
Sbjct: 186 GSQLLDISPIHEAAAIVAKLVRELKAL--QIDLKFFDIGGGLGVAYEKNECEPDLYDYAQ 243
Query: 265 IIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYG 324
I + L++ EPGR+L + V+ ++ +++ + + + DG
Sbjct: 244 GILAQLHGL--------DLTIGMEPGRYLVAKSGEFVCSVLYEK-QNKTKRFVVVDGAMN 294
Query: 325 SFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWL 384
S E A+ ++ V G C + D LP + D +
Sbjct: 295 DLIRPSLYE------AYHEIILPYNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIM 348
Query: 385 VFSDMGAYTTACGTNFNGFN 404
V + GAY + +N+N N
Sbjct: 349 VIKNTGAYGFSMSSNYNTRN 368
>sp|Q9JWA6|DCDA_NEIMA Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=lysA PE=3 SV=1
Length = 406
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 152/375 (40%), Gaps = 36/375 (9%)
Query: 52 PFYVLDLGVVISLYHQLISNLPMVHPY--YAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
P YV + + + + P YAVK N +I++ A+LGS FD S E+
Sbjct: 20 PLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELA 79
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPK----CELL 165
VLA + I++ K + I++A + GV +SI E+D+I+K + +
Sbjct: 80 RVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVS 139
Query: 166 IRIKSPVDGGARYPLDSKFGANPEEVAH------LLGAAQASGLAVIGVAFHIGSEATNL 219
+R+ VD + + AN +A+ AAQ L +IG+ HIGS+ T+L
Sbjct: 140 LRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDL 199
Query: 220 DAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC------NPGFHEAASIIKDAIQTY 273
A + + A G+ + LD+GGG P A ++ I T
Sbjct: 200 SPLVEACERILILVDALAAEGIV-LEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGTR 258
Query: 274 FPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEE 333
L +I EPGR L A L T+V + +E + + + D + +
Sbjct: 259 --------RLKLILEPGRSLVGNAGALLTRVEFVKYGEE-KNFVMVDAAMNDLMRPALYD 309
Query: 334 VIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGH-QLPELEVSDWLVFSDMGAY 392
H + + N + + GP C D F G + E D L+ GAY
Sbjct: 310 AY-----HHIEAVEPKNIAPLTANIVGPICETGD--FLGKDRTIACEEGDLLLIRSAGAY 362
Query: 393 TTACGTNFNGFNTAA 407
+ +N+N N AA
Sbjct: 363 GASMASNYNARNRAA 377
>sp|P19572|DCDA_PSEAE Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=lysA
PE=3 SV=2
Length = 415
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 163/393 (41%), Gaps = 42/393 (10%)
Query: 38 FMESIILKR--QELDEPFYVLDLGVVISLYHQLISNLP-MVHPY-YAVKCNPEPAILETL 93
F E + L R + P YV + + Y L M H +AVK N +L L
Sbjct: 12 FAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVL 71
Query: 94 AALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELD 153
A LG+ FD S E++ VLA P +++++ K ++ A VGV+ +S +EL+
Sbjct: 72 ARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELE 131
Query: 154 KIRK----WHPKCELLIRIKSPVDGGARYPL------DSKFGANPEEVAHLLG-AAQASG 202
++++ K + +R+ VD +P ++KFG +E + AA+
Sbjct: 132 RLQRVAAELGVKAPVSLRVNPDVDAQT-HPYISTGLKENKFGIAIDEAEAVYARAAELDH 190
Query: 203 LAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA 262
L VIGV HIGS+ T L+ F A+ + + A G+ +R LD+GGG E
Sbjct: 191 LEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIG-IRHLDLGGGLGVRY-RDEQ 248
Query: 263 ASIIKDAIQTYFPNETAAGH-LSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDG 321
+ D I+ E G L+++ EPGR + A L T+V + E +++ I D
Sbjct: 249 PPLAGDYIRAI--RERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLK-HTEHKDFAIVDA 305
Query: 322 KYGSF-------GWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQ 374
W+ + V + A R + GP C D +
Sbjct: 306 AMNDLIRPALYQAWMDVQAVRPRDAA------------PRRYDLVGPICETGDFLAKDRD 353
Query: 375 LPELEVSDWLVFSDMGAYTTACGTNFNGFNTAA 407
L L D L GAY +N+N AA
Sbjct: 354 LA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRAA 385
>sp|Q9Z661|DCDA_ZYMMO Diaminopimelate decarboxylase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=lysA PE=3 SV=1
Length = 421
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 139/341 (40%), Gaps = 34/341 (9%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
+AVK NP AIL + A G D S EI+ + + P+RI+++ K ++YA
Sbjct: 60 FAVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALE 119
Query: 139 VGVNLTTFDSIQELDKIRK----WHPKCELLIRIKSPVDGGARYPL-----DSKFGANPE 189
+G+ +S+ E++ + + K + +RI VD + D+KFG E
Sbjct: 120 IGIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAE 179
Query: 190 E-VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFE--TAARLGMTKMRV 246
+ ++ A L + G+A HIGS+ T+L F AA A+ ++E TA +
Sbjct: 180 DALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAA---AERIYEIITALEKAGHAIET 236
Query: 247 LDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIG 306
D+GGG + +A T + +I EPGR L A L +KVI
Sbjct: 237 ADLGGGLGVRYKDDQPEPPSVEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGVLLSKVI- 295
Query: 307 KRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHS------NNRTYRSTVFG 360
I + K F L + + L A H + +TY++ + G
Sbjct: 296 ----------RIKESKTARFVILDA--AMNDLVRPTLYDAYHEIKAVTPSAQTYQADIVG 343
Query: 361 PTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
P C D + ++ D + GAY + +N
Sbjct: 344 PVCETGDIFARNRSISAVKADDLMAIMSAGAYGATMASAYN 384
>sp|O27390|DCDA_METTH Diaminopimelate decarboxylase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=lysA PE=3 SV=1
Length = 428
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 39/379 (10%)
Query: 47 QELDEPFYVLDLGVVISLYHQLI----SNLPMVHPYYAVKCNPEPAILETLAALGSNFDC 102
E P YV+D + Y +L +YA K N A++ L GS D
Sbjct: 25 DEYGTPLYVIDEMRIRENYRRLYRAFSGEYSRFQVFYACKANTNLAVMRILEEEGSGIDA 84
Query: 103 ASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKC 162
SP EI L PDRI+Y +++A GV + DS +L ++ + P+
Sbjct: 85 VSPGEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINV-DSRSQLLRLSEIAPEG 143
Query: 163 ELLIRIKSPVDGGARYP------LDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEA 216
+ +P+ G + SKFG E + A G +G+ HIGS
Sbjct: 144 LRISFRVNPLVGAGHHEHCITGGEMSKFGVMEREAPEVYRMAMDLGFEPVGIHAHIGSGI 203
Query: 217 TNLDAFHAAIAEAKTVFETAARLGM---TKMRVLDIGGGFAC------NP-GFHEAASII 266
+ + F A+ +T+ + A R+ + +D GGG P E AS I
Sbjct: 204 LDPEPFMLAV---ETLMDIAGRVHEATGVEFEFIDFGGGLGIPYTPEEEPLDIDEFASKI 260
Query: 267 ----KDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGK 322
KD + Y G + EPGR++ A L T+V +++ R++ D
Sbjct: 261 TGLFKDKLSEY-----GLGRPMMCLEPGRYIVGDASYLLTRV--NTIKESYRKFAGVDAG 313
Query: 323 YGSFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSD 382
+ + + HIL + + + + V G C + D QLPE+ D
Sbjct: 314 FNTL----LRPAMYGSYHHILVAERPLDEPSEKMDVAGNVCESGDLFARDRQLPEINEGD 369
Query: 383 WLVFSDMGAYTTACGTNFN 401
L + GAY+ + + +N
Sbjct: 370 VLAIMNAGAYSFSMSSQYN 388
>sp|Q9RTK2|DCDA_DEIRA Diaminopimelate decarboxylase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=lysA PE=3 SV=1
Length = 379
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 149/369 (40%), Gaps = 50/369 (13%)
Query: 47 QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPS 106
Q P Y+ D + + ++ +YA+K NP +L AA G F+C S
Sbjct: 13 QRFGTPLYLYDAEELDAALWRVQRAFGDARIFYAMKANPNLNLLRRYAAAGVGFECVSLG 72
Query: 107 EIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLI 166
E+ A +R+I K + AA +G + + +++ P +L+
Sbjct: 73 ELLRAEAAGAGGERMILNGPAKSDAEYAAAARLGATIV----VDREEEVVLLPPGSRVLV 128
Query: 167 RIKSPV---------DGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEAT 217
R+ + G AR SKFG PE+V L + +G V+G+ HIGS
Sbjct: 129 RVNPAMTVSTHEHLATGTAR----SKFGLTPEQVPGTLAELRDAGHEVLGLHMHIGSAIE 184
Query: 218 NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNE 277
+ F AA A V E A +G + VL++GGG++ N A +A + +
Sbjct: 185 QAEDFTAAFAR---VTELRAHIG--GLSVLNVGGGWSLNADLEGIAYEAHEAARVF---- 235
Query: 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEEVIAK 337
L V EPGR+L +A L T+V+G + R + + D F L
Sbjct: 236 --GAELWV--EPGRYLVASAGWLLTRVVGTKRTG--RNFCLVDAGMTEF--LRP------ 281
Query: 338 CGAHILASASHSNNRTYRS------TVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGA 391
+L ASH + + V GP C + D + G LP + L+ + GA
Sbjct: 282 ----MLYGASHPLYPMWDALATEVWDVAGPACESGDLIARGVPLPTPQRGHLLLIGEAGA 337
Query: 392 YTTACGTNF 400
Y + + +
Sbjct: 338 YGASMSSTY 346
>sp|Q9KVL7|DCDA_VIBCH Diaminopimelate decarboxylase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=lysA PE=1
SV=1
Length = 417
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 139/342 (40%), Gaps = 37/342 (10%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YAVK N +L TLA LGS FD S E++ VLA P +++++ K + +K A
Sbjct: 58 YAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQ 117
Query: 139 VGVNLTTFDSIQELDKIRK----WHPKCELLIRIKSPVDG--------GARYPLDSKFGA 186
+ + +S EL ++ K K + +RI VD G R D+KFG
Sbjct: 118 LKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLR---DNKFGI 174
Query: 187 NPEEVAHLLGAAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMR 245
+ A + A + L V G+ HIGS+ T L F A + ++ G+ +R
Sbjct: 175 TFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGI-HIR 233
Query: 246 VLDIGGGFAC------NPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFT 299
LD+GGG P E A + D ++ + L +I EPGR +A A
Sbjct: 234 HLDVGGGLGVVYRDELPPQPSEYAKALLDRLERH-------RDLELIFEPGRAIAANAGV 286
Query: 300 LATKVIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVF 359
L TKV + E + + I D L + I +TY +
Sbjct: 287 LVTKVEFLK-HTEHKNFAIIDAAMND---LIRPALYQAWQDIIPLRPRQGEAQTY--DLV 340
Query: 360 GPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
GP C D + L L+ D L GAY +N+N
Sbjct: 341 GPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYN 381
>sp|Q9X1K5|DCDA_THEMA Diaminopimelate decarboxylase OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=lysA PE=1 SV=1
Length = 386
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 39/338 (11%)
Query: 77 PYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYA 136
P +AVK N P +L+ L G D + E+ A V +++ K +++
Sbjct: 41 PTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHF 100
Query: 137 ASVGVNLTTFDSIQELDKIRKWHPK-CELLIRIKSPVDGGARYPLDS-----KFGANPEE 190
V + DS +E++ R+ +P+ E IR+ VD + + KFG E+
Sbjct: 101 LREDVRIVNVDSFEEMEIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLED 160
Query: 191 VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIG 250
+ + + + + G+ HIGS+ T ++ F A ++ V + R G + ++IG
Sbjct: 161 LDSFM--ERFRSMNIRGLHVHIGSQITRVEPFVEAFSK---VVRASERYGFEE---INIG 212
Query: 251 GGFACNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFL-ADTAFTLATKVIGKRV 309
GG+ N E + + P+ VI E GR++ A + + L V+ KR
Sbjct: 213 GGWGINYSGEELD--LSSYREKVVPD--LKRFKRVIVEIGRYIVAPSGYLLLRVVLVKRR 268
Query: 310 RDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASH------SNNRTYRSTVFGPTC 363
+ + + + DG V+ + L SA H + R+ V GP C
Sbjct: 269 HN--KAFVVVDGGMN---------VLIRPA---LYSAYHRIFVLGKQGKEMRADVVGPLC 314
Query: 364 AAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
+ D + +LPE+E D + + GAY N+N
Sbjct: 315 ESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYN 352
>sp|O29458|DCDA_ARCFU Diaminopimelate decarboxylase OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=lysA PE=3 SV=1
Length = 419
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 163/410 (39%), Gaps = 62/410 (15%)
Query: 19 LVVRGERVPTITKDGGLLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPY 78
L V G +V I ++ G ++ S L + L+ Y + SN ++
Sbjct: 9 LTVEGVKVTEIVRETGTPVYVTSRALLERNLEA-------------YKKAFSNEGLL--- 52
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YAVK N A++ +A+ G D S E+ D +++ K I+ +
Sbjct: 53 YAVKANNNLALMRIIASHGFGADVFSDGELYLASLAGFRKDMVLFNGNSKSRKEIEMGVT 112
Query: 139 VGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPL-----DSKFGANPE 189
GV + DS+ EL I K + E+ R+ VD + +SKFG E
Sbjct: 113 AGVKFSV-DSLDELRTISKIAKEVGKEVEIAFRVNPDVDPKTHPKIATGLRESKFGIPHE 171
Query: 190 EVAHLLGAA-QASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLD 248
V A + G+ +G+ HIGS+ +L F A+ + + +LG+ ++ +D
Sbjct: 172 MVREAYEMALKLDGVVPVGIHCHIGSQILDLSPFVHALNKVMDIAVDIEKLGV-ELSFVD 230
Query: 249 IGGGFACN------PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLAT 302
+GGG + P + AS I + + T+ L + EPGR + L T
Sbjct: 231 MGGGLGIDYEGKGAPTPKDLASAILPEFEGRKADLTSDPQLWL--EPGRSIVGNTTVLIT 288
Query: 303 KVIGKRVRDELREY---------WINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRT 353
+V V+ + + I YGS+ H +A A+ +
Sbjct: 289 RV--NAVKKGYKNFVAVDAGFNVLIRPAMYGSY--------------HRVAVANKMDAEP 332
Query: 354 YRS-TVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNG 402
TV GP C + D + +LP++EV D + D GAY + +NG
Sbjct: 333 EEVYTVVGPICESGDVLARDRKLPKVEVGDLIAVFDAGAYGFVMSSQYNG 382
>sp|Q8A800|DCDA_BACTN Diaminopimelate decarboxylase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=lysA PE=3 SV=1
Length = 386
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 154/382 (40%), Gaps = 39/382 (10%)
Query: 43 ILKRQELDEPFYVLDLGVV---ISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSN 99
I K + L PFY D V+ +S +Q ++ P +YAVK N P +L + G
Sbjct: 7 IDKFRTLQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMG 66
Query: 100 FDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW- 158
DC S EI+A + ++I++A K I G+ +SI EL+ I +
Sbjct: 67 ADCVSGGEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELA 126
Query: 159 ---HPKCELLIRIKSPVDGGARYPL-----DSKFGANPEEVAHLLGAA-QASGLAVIGVA 209
+ + RI V + ++KFG + +++ ++ A + + IG+
Sbjct: 127 AAQNKIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLH 186
Query: 210 FHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRV--LDIGGGFACNPGFHEAASIIK 267
FHIGS+ ++ F IA V E +L ++ V +++GGG + G H +
Sbjct: 187 FHIGSQILDMGDF---IALCNRVNELQDKLEARRILVEHINVGGGLGIDYG-HPNRQSVP 242
Query: 268 DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFG 327
D ++YF T AG L + R F L V+G+ + ++ G F
Sbjct: 243 D-FKSYFA--TYAGQLKL-----RPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFA 294
Query: 328 WLSS--EEVIAKCGAHILASASH------SNNRTYRSTVFGPTCAAVDKVFTGHQLPELE 379
L + ++I L A H S V GP C + D L +++
Sbjct: 295 ILDAGMTDLIRPA----LYQAYHKMENITSEEPVEAYDVVGPICESSDVFGKAIDLNKVK 350
Query: 380 VSDWLVFSDMGAYTTACGTNFN 401
D + GAY + +N
Sbjct: 351 RGDLIALRSAGAYGEIMASGYN 372
>sp|Q94A94|DCDA2_ARATH Diaminopimelate decarboxylase 2, chloroplastic OS=Arabidopsis
thaliana GN=LYSA2 PE=2 SV=1
Length = 489
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 27/339 (7%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YA+K N ILE L +LG S +E++ L P + I+ K + + AA
Sbjct: 127 YAIKANNNLKILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQ 186
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
GV DS +L+ I R + +L+RI VD +P +SKFG
Sbjct: 187 EGV-FVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV-HPYVATGNKNSKFGIRN 244
Query: 189 EEVAHLLGAAQA--SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRV 246
E++ L +A L ++G H+GS T +D F A + R G ++
Sbjct: 245 EKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGF-EVSY 303
Query: 247 LDIGGGFACNPGFHEAASII---KDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATK 303
L+IGGG + ++ A +++ D I T + L++I EPGR L
Sbjct: 304 LNIGGGLGID--YYHAGAVLPTPMDLINT-VRELVLSRDLNLIIEPGRSLIANTCCFVNH 360
Query: 304 VIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHI-LASASHSNNRTYRSTVFGPT 362
V G + + + + + DG S + HI L S + + V GP
Sbjct: 361 VTGVKT-NGTKNFIVIDGSMAELIRPS----LYDAYQHIELVSPTPPEAEVTKFDVVGPV 415
Query: 363 CAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
C + D + +LP LV D GAY + + +N
Sbjct: 416 CESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYN 454
>sp|Q949X7|DCDA1_ARATH Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=LYSA1 PE=1 SV=1
Length = 484
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 27/339 (7%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YA+K N ILE L +LG S +E++ L P + I+ K + + AA
Sbjct: 122 YAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQ 181
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
GV DS +L+ I R + +L+RI VD +P +SKFG
Sbjct: 182 EGV-FVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQV-HPYVATGNKNSKFGIRN 239
Query: 189 EEVAHLLGAAQA--SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRV 246
E++ L +A L ++G H+GS T +D F A + R G ++
Sbjct: 240 EKLQWFLDQVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGF-EVSY 298
Query: 247 LDIGGGFACNPGFHEAASII---KDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATK 303
L+IGGG + ++ A +++ D I T + L++I EPGR L
Sbjct: 299 LNIGGGLGID--YYHAGAVLPTPMDLINT-VRELVLSRDLNLIIEPGRSLIANTCCFVNH 355
Query: 304 VIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHI-LASASHSNNRTYRSTVFGPT 362
V G + + + + + DG S + HI L S + + V GP
Sbjct: 356 VTGVKT-NGTKNFIVIDGSMAELIRPS----LYDAYQHIELVSPPPAEAEVTKFDVVGPV 410
Query: 363 CAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
C + D + +LP LV D GAY + + +N
Sbjct: 411 CESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYN 449
>sp|P31851|TABA_PSESZ Protein TabA OS=Pseudomonas syringae pv. tabaci GN=tabA PE=3 SV=1
Length = 420
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 140/375 (37%), Gaps = 49/375 (13%)
Query: 52 PFYVLDLGVVISLYHQLISNL--PMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109
PF++ D ++ + + Y+AVK P PAIL L GS DC+SP E+
Sbjct: 25 PFHIYDERAIVQTHRNVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSGLDCSSPVELM 84
Query: 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIR-- 167
L D I++ + +S + A G L TFD L+++ +
Sbjct: 85 LAERLGARGDDIVFTSNNTSLSEYQMALQAGA-LVTFDDRSMLEQVIALPDIVAFRVSPH 143
Query: 168 ---IKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHA 224
+S G A+ SKFG E+ A G G+ G N + A
Sbjct: 144 GVIARSSQMGNAQ---QSKFGIPEAELVQSYREAWDRGARRFGIH---GMMCANELSLEA 197
Query: 225 AIAEAKTVFETAARLGM---TKMRVLDIGGGFACNPGFHEA-------ASIIKDAIQTYF 274
A+ V E AR+ ++ ++IGGG + A +K A++ F
Sbjct: 198 AVQAGVQVIEVGARVAREAGIELEYINIGGGLGIPYRIDDQALDLTAYADALKRALKQAF 257
Query: 275 PNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVR-------DELREYWINDGKYGSFG 327
P+ T ++ E GR+++ L ++VI + + D + G YG++
Sbjct: 258 PHNTP----KLLMELGRYISGPHGVLVSRVINRCSKGREIVGLDASMSALMRPGLYGAYH 313
Query: 328 WLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFS 387
L+ L A + V G C DK LP + D +
Sbjct: 314 HLT------------LPFADQRPEGVF--DVVGALCENFDKFAVDRLLPSPLIGDLALIH 359
Query: 388 DMGAYTTACGTNFNG 402
D GA+ A G +NG
Sbjct: 360 DTGAHGHAMGFTYNG 374
>sp|Q6ZG77|DCDA_ORYSJ Probable diaminopimelate decarboxylase, chloroplastic OS=Oryza
sativa subsp. japonica GN=LYSA PE=2 SV=1
Length = 490
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 79 YAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138
YAVK N +L+ L LG S +E++ L P R I+ K + + AA
Sbjct: 127 YAVKANNNLRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLEDLVLAAE 186
Query: 139 VGVNLTTFDSIQELDKI----RKWHPKCELLIRIKSPVDGGARYPL------DSKFGANP 188
GV DS +L+ I R K +L+RI VD +P SKFG
Sbjct: 187 SGV-FVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQV-HPYVATGNKTSKFGIRN 244
Query: 189 EEVAHLLGAAQ--ASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRV 246
E++ L + + ++ + ++GV H+GS T +D F A A + R ++
Sbjct: 245 EKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDA-AGLMVNYVDEIRAQGFELEY 303
Query: 247 LDIGGGFACNPGFHEAASII---KDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATK 303
L+IGGG + +H +++ D I T + L++I EPGR L +
Sbjct: 304 LNIGGGLGID--YHHTDAVLPTPMDLINT-VRELVLSRDLTLIIEPGRSLIANTCCFVNR 360
Query: 304 VIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYRSTVFGPTC 363
V G + + + + + DG S + HI + + + GP C
Sbjct: 361 VTGVK-SNGTKNFIVVDGSMAELIRPS----LYGAYQHIELVSPSPDAEVATFDIVGPVC 415
Query: 364 AAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFN 401
+ D + +LP + LV D GAY + + +N
Sbjct: 416 ESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYN 453
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,326,326
Number of Sequences: 539616
Number of extensions: 6573823
Number of successful extensions: 16124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 15784
Number of HSP's gapped (non-prelim): 190
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)