Query 045356
Match_columns 419
No_of_seqs 184 out of 1679
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 22:06:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7odc_A Protein (ornithine deca 100.0 6.2E-70 2.1E-74 550.8 43.4 378 25-411 10-408 (424)
2 2oo0_A ODC, ornithine decarbox 100.0 4.2E-65 1.5E-69 521.4 46.4 377 25-410 20-417 (471)
3 3btn_A Antizyme inhibitor 1; T 100.0 6.6E-65 2.3E-69 517.7 41.8 378 25-411 11-406 (448)
4 3vab_A Diaminopimelate decarbo 100.0 1.2E-64 4.1E-69 514.6 36.7 350 48-411 46-416 (443)
5 1f3t_A ODC, ornithine decarbox 100.0 1.2E-63 4E-68 505.9 43.7 369 31-408 17-405 (425)
6 3n2b_A Diaminopimelate decarbo 100.0 3.2E-64 1.1E-68 511.2 35.7 347 48-410 49-414 (441)
7 2nva_A Arginine decarboxylase, 100.0 1.3E-62 4.5E-67 490.4 39.3 364 36-409 2-370 (372)
8 2plj_A Lysine/ornithine decarb 100.0 1.2E-60 4E-65 482.7 39.6 368 25-409 29-405 (419)
9 3mt1_A Putative carboxynorsper 100.0 5E-62 1.7E-66 484.3 28.3 329 49-410 2-342 (365)
10 3n29_A Carboxynorspermidine de 100.0 2.7E-61 9.3E-66 485.6 28.0 333 47-410 40-396 (418)
11 2j66_A BTRK, decarboxylase; bu 100.0 1.7E-59 5.7E-64 476.4 41.0 359 39-409 8-393 (428)
12 2o0t_A Diaminopimelate decarbo 100.0 1.5E-60 5.1E-65 488.5 33.0 355 49-410 40-425 (467)
13 1knw_A Diaminopimelate decarbo 100.0 1E-58 3.5E-63 469.6 41.2 353 38-411 16-397 (425)
14 2qgh_A Diaminopimelate decarbo 100.0 3.5E-58 1.2E-62 466.0 40.6 348 48-410 30-396 (425)
15 1twi_A Diaminopimelate decarbo 100.0 4.4E-58 1.5E-62 466.7 35.1 350 49-410 28-405 (434)
16 2yxx_A Diaminopimelate decarbo 100.0 8.4E-58 2.9E-62 457.9 32.9 339 48-411 10-362 (386)
17 2p3e_A Diaminopimelate decarbo 100.0 2.7E-55 9.1E-60 444.5 35.8 346 49-410 32-395 (420)
18 3nzp_A Arginine decarboxylase; 100.0 3.6E-49 1.2E-53 411.1 38.5 367 33-413 29-540 (619)
19 3nzq_A ADC, biosynthetic argin 100.0 1.9E-48 6.4E-53 407.7 37.5 366 34-413 71-589 (666)
20 3n2o_A ADC, biosynthetic argin 100.0 7E-48 2.4E-52 402.3 35.6 372 35-413 50-572 (648)
21 1xfc_A Alanine racemase; alpha 100.0 5.6E-39 1.9E-43 321.1 14.3 318 48-392 8-347 (384)
22 2dy3_A Alanine racemase; alpha 100.0 3E-39 1E-43 320.5 12.1 315 50-392 2-332 (361)
23 2vd8_A Alanine racemase; pyrid 100.0 2.1E-38 7.3E-43 317.5 12.1 320 49-394 9-347 (391)
24 1vfs_A Alanine racemase; TIM-b 100.0 4E-38 1.4E-42 315.0 13.7 319 49-392 5-344 (386)
25 1bd0_A Alanine racemase; isome 100.0 8.5E-38 2.9E-42 312.6 11.2 316 50-395 6-341 (388)
26 3co8_A Alanine racemase; prote 100.0 4.8E-35 1.7E-39 292.0 11.1 317 48-395 6-343 (380)
27 4ecl_A Serine racemase, vantg; 100.0 8.3E-32 2.8E-36 267.3 21.3 314 51-389 6-338 (374)
28 1rcq_A Catabolic alanine racem 100.0 6.7E-33 2.3E-37 274.4 11.9 308 51-390 3-326 (357)
29 2rjg_A Alanine racemase; alpha 100.0 1E-32 3.5E-37 274.9 12.4 310 50-390 22-348 (379)
30 3kw3_A Alanine racemase; niaid 100.0 2.5E-31 8.6E-36 263.4 13.4 309 48-389 17-345 (376)
31 3e5p_A Alanine racemase; ALR, 100.0 2E-31 6.9E-36 264.0 4.4 309 49-389 6-336 (371)
32 3anu_A D-serine dehydratase; P 100.0 3.9E-30 1.3E-34 256.3 11.4 240 48-309 9-274 (376)
33 3mub_A Alanine racemase; alpha 100.0 3.7E-30 1.2E-34 254.6 10.0 310 49-389 6-332 (367)
34 4a3q_A Alanine racemase 1; iso 100.0 8.3E-30 2.8E-34 253.0 11.4 307 49-389 6-334 (382)
35 3hur_A Alanine racemase; struc 100.0 3.9E-29 1.3E-33 248.7 6.7 309 49-389 7-340 (395)
36 3gwq_A D-serine deaminase; str 99.9 2E-23 6.8E-28 210.6 31.2 193 47-252 42-252 (426)
37 3llx_A Predicted amino acid al 99.9 9.9E-25 3.4E-29 217.2 18.2 191 47-254 10-220 (376)
38 3cpg_A Uncharacterized protein 99.8 3.4E-20 1.1E-24 177.2 18.6 188 54-252 25-247 (282)
39 3sy1_A UPF0001 protein YGGS; e 99.7 3.9E-17 1.3E-21 152.2 17.5 167 74-252 29-206 (245)
40 1ct5_A Protein (yeast hypothet 99.7 1.1E-15 3.8E-20 143.5 15.9 179 57-249 17-220 (256)
41 3r79_A Uncharacterized protein 99.6 2.1E-14 7.1E-19 133.4 17.8 174 59-252 11-198 (244)
42 2x7v_A Probable endonuclease 4 82.6 7.7 0.00026 35.2 10.3 100 185-290 43-146 (287)
43 3qc0_A Sugar isomerase; TIM ba 82.1 8.5 0.00029 34.5 10.4 94 190-289 46-143 (275)
44 1ydn_A Hydroxymethylglutaryl-C 80.6 14 0.00049 34.1 11.5 62 56-117 23-94 (295)
45 1qtw_A Endonuclease IV; DNA re 80.5 5.9 0.0002 35.9 8.6 99 186-290 44-147 (285)
46 1ur4_A Galactanase; hydrolase, 80.3 45 0.0015 32.4 17.0 144 99-275 27-195 (399)
47 1nvm_A HOA, 4-hydroxy-2-oxoval 80.3 15 0.00053 34.9 11.8 26 187-212 176-203 (345)
48 2ftp_A Hydroxymethylglutaryl-C 80.1 14 0.00047 34.5 11.1 15 103-117 84-98 (302)
49 1i60_A IOLI protein; beta barr 79.2 14 0.00049 33.0 10.8 95 191-292 48-146 (278)
50 3cqj_A L-ribulose-5-phosphate 76.5 10 0.00034 34.7 9.0 100 185-291 62-169 (295)
51 3m0m_A L-rhamnose isomerase; b 76.3 12 0.0004 37.1 9.7 99 189-290 107-221 (438)
52 3f4w_A Putative hexulose 6 pho 75.8 36 0.0012 29.3 12.1 95 63-160 42-158 (211)
53 1fob_A Beta-1,4-galactanase; B 75.4 49 0.0017 31.1 13.7 134 99-270 6-162 (334)
54 3obe_A Sugar phosphate isomera 75.2 13 0.00045 34.4 9.5 93 190-291 77-172 (305)
55 3vni_A Xylose isomerase domain 72.5 41 0.0014 30.3 12.1 97 187-290 45-153 (294)
56 3ngf_A AP endonuclease, family 70.7 20 0.00068 32.2 9.4 92 191-289 50-151 (269)
57 3tva_A Xylose isomerase domain 70.4 22 0.00074 32.2 9.7 97 186-290 48-160 (290)
58 2zvr_A Uncharacterized protein 69.2 18 0.00063 32.8 8.9 94 191-290 70-171 (290)
59 3ktc_A Xylose isomerase; putat 66.7 30 0.001 32.2 10.0 93 190-288 62-167 (333)
60 1hjs_A Beta-1,4-galactanase; 4 66.4 87 0.003 29.4 13.5 134 99-270 6-161 (332)
61 3lab_A Putative KDPG (2-keto-3 66.1 22 0.00077 31.5 8.2 63 101-170 71-140 (217)
62 4fo4_A Inosine 5'-monophosphat 65.2 71 0.0024 30.6 12.3 15 102-116 157-171 (366)
63 3kws_A Putative sugar isomeras 64.9 21 0.00072 32.3 8.3 62 189-253 64-127 (287)
64 1ydo_A HMG-COA lyase; TIM-barr 64.9 54 0.0018 30.5 11.2 13 187-199 184-196 (307)
65 2cw6_A Hydroxymethylglutaryl-C 64.5 41 0.0014 31.1 10.3 140 56-212 24-209 (298)
66 2q02_A Putative cytoplasmic pr 64.0 61 0.0021 28.7 11.2 90 190-291 52-142 (272)
67 1k77_A EC1530, hypothetical pr 63.9 23 0.0008 31.3 8.3 92 192-290 43-145 (260)
68 3ivs_A Homocitrate synthase, m 62.4 1.2E+02 0.0041 29.6 13.6 66 51-117 53-125 (423)
69 2ztj_A Homocitrate synthase; ( 60.2 86 0.0029 30.1 12.0 26 186-212 170-198 (382)
70 2c6q_A GMP reductase 2; TIM ba 59.5 48 0.0016 31.5 10.0 84 60-148 147-253 (351)
71 3aal_A Probable endonuclease 4 58.8 88 0.003 28.4 11.5 95 188-290 52-151 (303)
72 3usb_A Inosine-5'-monophosphat 58.5 1.2E+02 0.004 30.4 13.1 94 50-148 268-389 (511)
73 3r2g_A Inosine 5'-monophosphat 57.7 74 0.0025 30.4 10.8 15 102-116 149-163 (361)
74 1bxb_A Xylose isomerase; xylos 56.5 39 0.0013 32.3 8.9 61 189-252 69-138 (387)
75 1zcc_A Glycerophosphodiester p 56.4 56 0.0019 29.1 9.4 100 50-157 127-233 (248)
76 3m1r_A Formimidoylglutamase; s 56.1 58 0.002 30.5 9.7 103 108-211 172-289 (322)
77 3l12_A Putative glycerophospho 55.7 92 0.0032 28.7 11.1 102 50-157 180-306 (313)
78 3u0h_A Xylose isomerase domain 55.2 27 0.00092 31.2 7.2 49 191-240 49-97 (281)
79 1xim_A D-xylose isomerase; iso 55.2 45 0.0015 32.0 9.1 52 189-240 69-129 (393)
80 4avf_A Inosine-5'-monophosphat 54.5 1.7E+02 0.0058 29.0 13.4 94 50-148 241-362 (490)
81 1rqb_A Transcarboxylase 5S sub 54.2 72 0.0025 32.3 10.6 26 186-212 201-229 (539)
82 3zwt_A Dihydroorotate dehydrog 53.9 34 0.0011 32.9 7.8 29 120-148 300-328 (367)
83 3qvq_A Phosphodiesterase OLEI0 53.5 1.2E+02 0.0041 26.9 12.3 87 66-157 157-248 (252)
84 4e38_A Keto-hydroxyglutarate-a 51.7 81 0.0028 28.1 9.4 101 33-144 46-151 (232)
85 1muw_A Xylose isomerase; atomi 50.5 63 0.0022 30.8 9.3 62 189-253 69-139 (386)
86 3ks6_A Glycerophosphoryl diest 50.4 1.4E+02 0.0046 26.5 12.8 117 34-157 117-242 (250)
87 2g0w_A LMO2234 protein; putati 50.3 1.1E+02 0.0036 27.7 10.5 86 192-291 71-157 (296)
88 1xla_A D-xylose isomerase; iso 50.1 51 0.0017 31.6 8.6 61 190-253 70-139 (394)
89 3kts_A Glycerol uptake operon 50.1 45 0.0015 28.9 7.2 73 53-149 108-181 (192)
90 3i65_A Dihydroorotate dehydrog 49.9 34 0.0011 33.5 7.1 30 120-149 347-376 (415)
91 1gq6_A Proclavaminate amidino 49.8 23 0.00078 33.1 5.8 102 108-211 164-278 (313)
92 3no3_A Glycerophosphodiester p 49.5 1.4E+02 0.0047 26.3 10.9 85 65-157 143-234 (238)
93 3igs_A N-acetylmannosamine-6-p 49.2 45 0.0015 29.6 7.4 57 87-147 39-108 (232)
94 2ef5_A Arginase; TTHA1496, str 48.9 86 0.0029 28.7 9.6 95 116-211 157-261 (290)
95 1o1z_A GDPD, glycerophosphodie 48.0 1.4E+02 0.0049 26.1 11.0 95 50-154 126-232 (234)
96 1jcn_A Inosine monophosphate d 48.0 2.2E+02 0.0075 28.2 14.3 95 49-148 266-388 (514)
97 1vrd_A Inosine-5'-monophosphat 47.1 2E+02 0.007 28.3 12.7 83 60-147 264-369 (494)
98 3lhl_A Putative agmatinase; pr 46.2 1.3E+02 0.0044 27.5 10.3 94 117-211 149-247 (287)
99 3eeg_A 2-isopropylmalate synth 45.9 1.6E+02 0.0054 27.5 11.0 27 186-212 177-207 (325)
100 1wa3_A 2-keto-3-deoxy-6-phosph 45.7 1.4E+02 0.0047 25.3 13.6 42 103-147 71-131 (205)
101 3q58_A N-acetylmannosamine-6-p 45.7 47 0.0016 29.5 6.9 57 87-147 39-108 (229)
102 3dx5_A Uncharacterized protein 45.5 36 0.0012 30.5 6.4 14 130-143 18-31 (286)
103 3rcy_A Mandelate racemase/muco 45.1 78 0.0027 31.0 9.1 103 57-163 185-305 (433)
104 3aam_A Endonuclease IV, endoiv 45.0 1.4E+02 0.0048 26.3 10.3 92 185-290 45-141 (270)
105 3nio_A Guanidinobutyrase; PA14 44.4 49 0.0017 30.9 7.2 102 108-211 172-286 (319)
106 2zds_A Putative DNA-binding pr 44.1 47 0.0016 30.6 7.1 55 189-244 51-127 (340)
107 2pz0_A Glycerophosphoryl diest 44.1 1.7E+02 0.0058 25.9 13.7 115 34-156 129-248 (252)
108 3lmz_A Putative sugar isomeras 43.6 1.3E+02 0.0043 26.4 9.7 47 184-240 56-102 (257)
109 3khj_A Inosine-5-monophosphate 43.6 2.2E+02 0.0075 27.0 11.8 34 88-123 135-172 (361)
110 2nx9_A Oxaloacetate decarboxyl 43.4 1.4E+02 0.0048 29.5 10.6 26 186-212 184-210 (464)
111 4fxs_A Inosine-5'-monophosphat 43.3 1.8E+02 0.0063 28.8 11.6 95 50-149 243-365 (496)
112 1yxy_A Putative N-acetylmannos 43.1 1.2E+02 0.0039 26.5 9.2 78 87-168 39-140 (234)
113 3niq_A 3-guanidinopropionase; 42.2 30 0.001 32.6 5.3 102 108-211 169-283 (326)
114 1eep_A Inosine 5'-monophosphat 41.5 1.1E+02 0.0039 29.3 9.6 28 120-147 258-285 (404)
115 1eye_A DHPS 1, dihydropteroate 41.3 1.6E+02 0.0054 27.0 9.9 56 87-145 70-129 (280)
116 4e38_A Keto-hydroxyglutarate-a 41.3 60 0.002 29.0 6.8 68 76-144 35-110 (232)
117 4e5t_A Mandelate racemase / mu 41.1 59 0.002 31.4 7.4 79 58-140 191-281 (404)
118 1nvm_A HOA, 4-hydroxy-2-oxoval 40.5 1.9E+02 0.0065 27.1 10.7 133 87-231 33-189 (345)
119 3ble_A Citramalate synthase fr 40.2 59 0.002 30.6 7.1 26 186-212 195-222 (337)
120 2htm_A Thiazole biosynthesis p 39.4 2.2E+02 0.0075 25.8 11.1 89 55-148 107-208 (268)
121 3tc3_A UV damage endonuclease; 39.1 1.3E+02 0.0046 28.0 9.1 101 148-255 58-169 (310)
122 3eez_A Putative mandelate race 39.1 1.3E+02 0.0045 28.6 9.5 26 58-85 172-198 (378)
123 3lab_A Putative KDPG (2-keto-3 39.1 1.1E+02 0.0038 26.9 8.1 71 74-145 12-90 (217)
124 2qgq_A Protein TM_1862; alpha- 37.8 2.4E+02 0.008 25.7 13.5 114 106-226 40-177 (304)
125 2o55_A Putative glycerophospho 37.8 2.1E+02 0.0073 25.2 11.6 117 35-156 127-253 (258)
126 2otd_A Glycerophosphodiester p 37.8 1.8E+02 0.0061 25.6 9.7 21 129-149 217-237 (247)
127 2qw5_A Xylose isomerase-like T 37.6 2E+02 0.0067 26.3 10.3 51 189-240 65-122 (335)
128 1zfj_A Inosine monophosphate d 37.2 2.9E+02 0.01 27.0 12.1 29 120-148 338-366 (491)
129 2hk0_A D-psicose 3-epimerase; 37.0 2.3E+02 0.0078 25.5 10.6 51 189-240 66-120 (309)
130 1f6y_A 5-methyltetrahydrofolat 36.8 2.3E+02 0.008 25.4 10.8 139 50-211 69-231 (262)
131 1ypf_A GMP reductase; GUAC, pu 36.8 1.9E+02 0.0064 27.0 10.0 15 102-116 157-171 (336)
132 3ozy_A Putative mandelate race 36.5 1.5E+02 0.005 28.4 9.4 43 57-101 177-227 (389)
133 3mz2_A Glycerophosphoryl diest 35.9 2.3E+02 0.0077 25.9 10.2 89 65-158 170-277 (292)
134 3gr7_A NADPH dehydrogenase; fl 35.8 2.8E+02 0.0094 25.9 11.3 93 61-158 197-323 (340)
135 3gr7_A NADPH dehydrogenase; fl 35.2 2.3E+02 0.008 26.4 10.4 44 161-214 209-252 (340)
136 1pq3_A Arginase II, mitochondr 34.8 1.9E+02 0.0064 26.6 9.5 94 117-211 166-272 (306)
137 3go2_A Putative L-alanine-DL-g 34.7 1.7E+02 0.0059 28.1 9.6 96 60-159 198-308 (409)
138 3hgj_A Chromate reductase; TIM 34.6 2.5E+02 0.0085 26.3 10.6 45 159-213 217-261 (349)
139 2qul_A D-tagatose 3-epimerase; 34.6 1.3E+02 0.0043 26.7 8.3 51 189-240 47-101 (290)
140 3i6e_A Muconate cycloisomerase 34.2 3E+02 0.01 26.1 11.2 78 58-139 176-264 (385)
141 1tx2_A DHPS, dihydropteroate s 34.1 1.4E+02 0.0049 27.5 8.4 69 50-124 115-204 (297)
142 3i4k_A Muconate lactonizing en 34.0 2.3E+02 0.0078 26.9 10.3 43 57-101 176-226 (383)
143 2yci_X 5-methyltetrahydrofolat 33.9 1.6E+02 0.0055 26.7 8.7 58 87-147 67-132 (271)
144 1wv2_A Thiazole moeity, thiazo 33.8 2.7E+02 0.0092 25.2 10.4 71 74-148 135-217 (265)
145 4e4u_A Mandalate racemase/muco 33.6 1.5E+02 0.0051 28.6 9.0 79 58-140 184-274 (412)
146 3rr1_A GALD, putative D-galact 33.6 1.4E+02 0.0047 28.9 8.6 101 58-162 161-279 (405)
147 1tv5_A Dhodehase, dihydroorota 33.0 61 0.0021 31.9 6.0 68 80-148 301-403 (443)
148 2dqw_A Dihydropteroate synthas 32.9 1.6E+02 0.0054 27.2 8.5 55 87-145 93-151 (294)
149 3qja_A IGPS, indole-3-glycerol 32.8 1.3E+02 0.0043 27.4 7.8 60 87-148 152-243 (272)
150 3l0g_A Nicotinate-nucleotide p 32.7 59 0.002 30.2 5.4 29 129-157 216-246 (300)
151 3p14_A L-rhamnose isomerase; T 32.5 2.9E+02 0.0098 26.9 10.4 101 188-290 117-233 (424)
152 3ewb_X 2-isopropylmalate synth 32.4 2.9E+02 0.01 25.2 10.9 26 186-211 176-205 (293)
153 1aj0_A DHPS, dihydropteroate s 32.4 1.8E+02 0.0063 26.5 8.8 56 87-145 79-138 (282)
154 3sbf_A Mandelate racemase / mu 32.3 1.1E+02 0.0039 29.3 7.8 98 58-159 184-299 (401)
155 3q58_A N-acetylmannosamine-6-p 32.0 1.5E+02 0.0052 26.0 8.0 72 86-159 118-203 (229)
156 4g3h_A Arginase (ROCF); rossma 31.9 1.8E+02 0.0063 27.1 9.0 96 116-211 174-280 (330)
157 1f76_A Dihydroorotate dehydrog 31.3 1.2E+02 0.0041 28.2 7.7 90 58-148 187-319 (336)
158 2ztj_A Homocitrate synthase; ( 31.2 1.9E+02 0.0065 27.6 9.1 44 185-231 141-184 (382)
159 2og9_A Mandelate racemase/muco 30.8 2.2E+02 0.0074 27.1 9.6 18 189-206 296-313 (393)
160 3dxi_A Putative aldolase; TIM 30.7 1.3E+02 0.0044 28.1 7.6 25 187-212 170-195 (320)
161 2pgw_A Muconate cycloisomerase 30.6 3E+02 0.01 26.0 10.5 98 57-158 173-287 (384)
162 3tn4_A Phosphotriesterase; lac 30.4 2.2E+02 0.0075 27.0 9.3 60 88-148 197-264 (360)
163 2cev_A Protein (arginase); enz 30.3 1.4E+02 0.0048 27.3 7.8 95 116-211 164-270 (299)
164 3tsm_A IGPS, indole-3-glycerol 30.2 3.1E+02 0.011 24.8 11.0 105 104-227 131-240 (272)
165 1ep3_A Dihydroorotate dehydrog 30.1 3.1E+02 0.011 24.7 12.6 13 57-69 109-121 (311)
166 1woh_A Agmatinase; alpha/beta 30.1 3.2E+02 0.011 25.0 10.3 102 108-211 163-273 (305)
167 3o63_A Probable thiamine-phosp 30.1 2.9E+02 0.01 24.4 12.0 38 87-127 125-164 (243)
168 3cny_A Inositol catabolism pro 29.9 1.3E+02 0.0043 26.9 7.4 55 191-249 57-111 (301)
169 3ffs_A Inosine-5-monophosphate 29.8 3.4E+02 0.012 26.1 10.7 16 101-116 191-206 (400)
170 3v3w_A Starvation sensing prot 29.6 91 0.0031 30.3 6.6 101 58-163 209-328 (424)
171 3tdn_A FLR symmetric alpha-bet 28.2 1.5E+02 0.0051 26.0 7.4 70 87-158 38-124 (247)
172 3ch0_A Glycerophosphodiester p 27.8 63 0.0022 29.1 4.8 48 112-159 208-257 (272)
173 1qap_A Quinolinic acid phospho 27.7 3.6E+02 0.012 24.7 10.0 37 98-138 211-247 (296)
174 2aeb_A Arginase 1; hydrolase, 27.6 1.9E+02 0.0065 26.8 8.3 94 117-211 170-276 (322)
175 2wm8_A MDP-1, magnesium-depend 27.5 2.5E+02 0.0086 22.9 8.7 10 89-98 76-85 (187)
176 1gox_A (S)-2-hydroxy-acid oxid 27.4 3.2E+02 0.011 25.8 10.0 81 65-148 217-310 (370)
177 1yx1_A Hypothetical protein PA 27.4 1.1E+02 0.0039 26.9 6.5 26 187-213 140-165 (264)
178 3dip_A Enolase; structural gen 27.2 2.1E+02 0.0073 27.5 8.8 78 58-140 196-287 (410)
179 3jva_A Dipeptide epimerase; en 27.2 2.2E+02 0.0074 26.7 8.7 24 188-212 271-294 (354)
180 3b0p_A TRNA-dihydrouridine syn 27.1 3.8E+02 0.013 25.0 10.4 87 57-148 110-226 (350)
181 2nli_A Lactate oxidase; flavoe 27.1 3.8E+02 0.013 25.3 10.5 27 121-147 287-313 (368)
182 3t6c_A RSPA, putative MAND fam 27.0 1.2E+02 0.004 29.7 6.9 97 58-159 223-338 (440)
183 1xfk_A Formimidoylglutamase; f 26.9 2.4E+02 0.0081 26.3 8.9 95 116-211 191-299 (336)
184 3sl1_A Arginase; metallohydrol 26.8 2.6E+02 0.009 27.1 9.1 94 117-211 263-369 (413)
185 3tr9_A Dihydropteroate synthas 26.8 2.3E+02 0.0079 26.4 8.5 57 87-146 94-154 (314)
186 3paj_A Nicotinate-nucleotide p 26.7 3.9E+02 0.013 24.9 10.9 56 99-158 235-295 (320)
187 3t7v_A Methylornithine synthas 26.6 3.8E+02 0.013 24.7 10.4 111 103-223 91-220 (350)
188 1aj0_A DHPS, dihydropteroate s 25.9 2.1E+02 0.0071 26.2 8.0 28 75-102 111-138 (282)
189 1vd6_A Glycerophosphoryl diest 25.8 3.2E+02 0.011 23.5 12.3 94 50-153 122-220 (224)
190 2q02_A Putative cytoplasmic pr 25.6 3.3E+02 0.011 23.6 11.6 18 86-103 21-39 (272)
191 3l23_A Sugar phosphate isomera 25.5 1.4E+02 0.0048 27.1 6.9 57 192-251 62-129 (303)
192 3r4e_A Mandelate racemase/muco 25.4 78 0.0027 30.7 5.3 97 58-159 203-318 (418)
193 2ovl_A Putative racemase; stru 25.2 2E+02 0.007 27.0 8.2 21 189-210 280-300 (371)
194 3ro6_B Putative chloromuconate 25.2 1.1E+02 0.0037 28.9 6.1 26 188-214 273-298 (356)
195 2pp0_A L-talarate/galactarate 25.0 3.1E+02 0.011 26.1 9.5 18 189-206 309-326 (398)
196 3ru6_A Orotidine 5'-phosphate 24.8 78 0.0027 29.4 4.8 58 90-148 164-231 (303)
197 3ve9_A Orotidine-5'-phosphate 24.7 98 0.0034 27.1 5.3 58 87-147 118-180 (215)
198 4dxk_A Mandelate racemase / mu 24.5 1.1E+02 0.0038 29.4 6.1 41 59-101 194-242 (400)
199 4dwd_A Mandelate racemase/muco 24.3 2.6E+02 0.0089 26.7 8.8 40 57-98 173-219 (393)
200 3p6l_A Sugar phosphate isomera 24.0 2.8E+02 0.0094 24.1 8.5 47 184-240 58-104 (262)
201 3ddm_A Putative mandelate race 24.0 1.8E+02 0.006 27.9 7.5 43 57-101 181-231 (392)
202 3hgj_A Chromate reductase; TIM 23.9 4.4E+02 0.015 24.6 10.2 84 61-148 205-319 (349)
203 2qgy_A Enolase from the enviro 23.6 3.3E+02 0.011 25.7 9.4 18 189-206 283-300 (391)
204 1tkk_A Similar to chloromucona 23.5 2.9E+02 0.0099 25.8 8.9 23 189-212 276-298 (366)
205 3fcp_A L-Ala-D/L-Glu epimerase 23.4 4.7E+02 0.016 24.6 10.6 79 58-140 176-266 (381)
206 3sgz_A Hydroxyacid oxidase 2; 23.3 4.4E+02 0.015 24.8 9.9 31 86-116 205-239 (352)
207 3stp_A Galactonate dehydratase 23.3 3.5E+02 0.012 25.9 9.6 78 59-140 214-303 (412)
208 1jub_A Dihydroorotate dehydrog 23.3 3.8E+02 0.013 24.2 9.5 27 120-146 244-270 (311)
209 2xvc_A ESCRT-III, SSO0910; cel 23.2 42 0.0014 23.0 1.9 22 182-203 33-54 (59)
210 2e6f_A Dihydroorotate dehydrog 23.0 3.6E+02 0.012 24.5 9.3 23 120-142 246-268 (314)
211 1r85_A Endo-1,4-beta-xylanase; 22.9 1.1E+02 0.0039 29.2 5.8 57 189-253 212-272 (379)
212 1eye_A DHPS 1, dihydropteroate 22.9 3.7E+02 0.013 24.4 9.1 29 74-102 100-129 (280)
213 3dgb_A Muconate cycloisomerase 22.8 3.7E+02 0.013 25.4 9.5 85 59-147 178-275 (382)
214 4dye_A Isomerase; enolase fami 22.5 2.9E+02 0.01 26.4 8.7 99 57-160 195-309 (398)
215 3tqv_A Nicotinate-nucleotide p 22.4 1.2E+02 0.004 28.0 5.4 94 62-158 121-238 (287)
216 2p8b_A Mandelate racemase/muco 22.1 3.7E+02 0.013 25.1 9.3 100 57-160 167-285 (369)
217 1chr_A Chloromuconate cycloiso 21.9 3.8E+02 0.013 25.1 9.4 38 59-98 172-216 (370)
218 3pzl_A Agmatine ureohydrolase; 21.9 1.8E+02 0.0063 26.9 6.9 90 117-211 172-271 (313)
219 2a0m_A Arginase superfamily pr 21.9 4.3E+02 0.015 24.3 9.5 102 108-211 166-280 (316)
220 3igs_A N-acetylmannosamine-6-p 21.9 3.8E+02 0.013 23.4 8.7 30 87-116 119-150 (232)
221 1p4c_A L(+)-mandelate dehydrog 21.8 2.5E+02 0.0084 26.7 8.0 79 62-148 214-308 (380)
222 1tx2_A DHPS, dihydropteroate s 21.6 3.3E+02 0.011 25.0 8.5 57 87-146 104-165 (297)
223 1a0c_A Xylose isomerase; ketol 21.4 3.8E+02 0.013 26.1 9.4 56 195-253 126-190 (438)
224 3tfx_A Orotidine 5'-phosphate 21.4 1.2E+02 0.0041 27.4 5.3 125 23-148 56-217 (259)
225 3u0h_A Xylose isomerase domain 21.3 1.3E+02 0.0045 26.4 5.7 94 191-294 86-185 (281)
226 3toy_A Mandelate racemase/muco 21.3 3.8E+02 0.013 25.4 9.2 23 182-205 296-318 (383)
227 4a29_A Engineered retro-aldol 21.0 4.2E+02 0.014 23.8 8.7 72 86-159 142-226 (258)
228 3nav_A Tryptophan synthase alp 20.9 4.1E+02 0.014 23.9 8.9 18 58-75 81-98 (271)
229 3tqv_A Nicotinate-nucleotide p 20.8 3.9E+02 0.014 24.4 8.7 56 79-138 172-237 (287)
230 1ujp_A Tryptophan synthase alp 20.7 3.7E+02 0.013 24.2 8.6 79 59-140 77-167 (271)
231 3vnd_A TSA, tryptophan synthas 20.6 3.5E+02 0.012 24.4 8.3 13 59-71 80-92 (267)
232 1mzh_A Deoxyribose-phosphate a 20.5 4.2E+02 0.014 22.9 10.5 87 59-150 102-207 (225)
233 3vcn_A Mannonate dehydratase; 20.4 90 0.0031 30.4 4.5 97 59-160 211-326 (425)
234 3bdk_A D-mannonate dehydratase 20.3 3.5E+02 0.012 25.8 8.7 56 187-243 62-119 (386)
235 1vc4_A Indole-3-glycerol phosp 20.3 4.5E+02 0.015 23.3 10.8 81 87-169 68-162 (254)
236 3eye_A PTS system N-acetylgala 20.2 2.3E+02 0.0077 23.8 6.4 54 87-142 49-103 (168)
237 1olt_A Oxygen-independent copr 20.1 1.8E+02 0.0062 28.4 6.8 88 50-138 113-227 (457)
238 4fo4_A Inosine 5'-monophosphat 20.1 4.9E+02 0.017 24.6 9.6 56 104-161 109-172 (366)
No 1
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=100.00 E-value=6.2e-70 Score=550.82 Aligned_cols=378 Identities=40% Similarity=0.709 Sum_probs=324.2
Q ss_pred ceeeecCCCCHHHHHHHHHhhcC--CCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEE
Q 045356 25 RVPTITKDGGLLEFMESIILKRQ--ELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDC 102 (419)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~--~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~V 102 (419)
.+..++...++.++++++|.+.. ..+||+|+||+++|++|++++++.+|+++++|++|||+++.|++++.+.|+||+|
T Consensus 10 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~tP~~v~dl~~l~~n~~~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dv 89 (424)
T 7odc_A 10 DCHILDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDC 89 (424)
T ss_dssp EEEEECSSCCHHHHHHHHHC------CCCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEEE
T ss_pred cEEEecCCCCHHHHHHHHHhhcccCCCCCcEEEeeHHHHHHHHHHHHHhCCCCeEEEEeccCCcHHHHHHHHHcCCcEEE
Confidence 45567778889999999987652 3699999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCC
Q 045356 103 ASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDS 182 (419)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~s 182 (419)
+|.+|++.++++|+++++|+|+||.|++++++.|+++|+..+++||++|++++.+.++..+++|||+++... .....++
T Consensus 90 aS~~E~~~~~~~G~~~~~Ii~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lRvn~~~~~-~~~~~~s 168 (424)
T 7odc_A 90 ASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIATDDSK-AVCRLSV 168 (424)
T ss_dssp CSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC------------
T ss_pred CCHHHHHHHHHcCCChhhEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCeEEEEECCCCCC-CCCCCCC
Confidence 999999999999999889999999999999999999999767999999999999999999999999996421 1223359
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC----CC
Q 045356 183 KFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN----PG 258 (419)
Q Consensus 183 RfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~----~~ 258 (419)
|||++++++.++++.+++.++++.|||+|+||++.+.+.+.++++++.++++.+++.| .++++||+||||+.. ++
T Consensus 169 kfG~~~~~~~~~~~~~~~~~l~l~Glh~H~gsq~~d~~~~~~a~~~~~~~~~~~~~~G-~~~~~ldiGGG~~~~~~~~~~ 247 (424)
T 7odc_A 169 KFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVG-FSMHLLDIGGGFPGSEDTKLK 247 (424)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEEEECCCCSSCCCTHHHHHHHHHHHHHHHHHHHHT-CCCCEEECCCCCCCSSSSSSC
T ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEeCCCcCCCCCCCCC
Confidence 9999999999999988878999999999999999899999999999999999899999 899999999999973 47
Q ss_pred HHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeC--------------CceEEEEecCCCC
Q 045356 259 FHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRD--------------ELREYWINDGKYG 324 (419)
Q Consensus 259 ~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~--------------~~~~~~i~dg~~~ 324 (419)
++++++.|++.+.++++... .++|++|||||++++||+|+|+|+++|... ...+|++++|+|+
T Consensus 248 ~~~~a~~i~~~~~~~~~~~~---~~~ii~EPGR~lva~ag~lv~~V~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~ 324 (424)
T 7odc_A 248 FEEITSVINPALDKYFPSDS---GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYG 324 (424)
T ss_dssp HHHHHHHHHHHHHHHSCGGG---TCEEEECCSHHHHGGGEEEEEEEEEEEEEC-------------CCEEEEEESCCTTT
T ss_pred HHHHHHHHHHHHHHHhcccC---CcEEEECCCHHhhhhcEEEEEEEEEEEEccccccccccccccCcceEEEEEeCCcCC
Confidence 99999999999999987432 389999999999999999999999999742 1356889999999
Q ss_pred CcchhhhHHHHhhcceeeecccC-CCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCC
Q 045356 325 SFGWLSSEEVIAKCGAHILASAS-HSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGF 403 (419)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~ 403 (419)
++++.+|.... ..|+.... ......++++|+||+|+++|+|.+++.||++++||+|+|.++|||+++|+|+|||+
T Consensus 325 ~~~~~ly~~~~----~~p~~~~~~~~~~~~~~~~v~Gp~C~s~D~l~~~~~Lp~l~~GD~l~~~~~GAY~~s~ss~fN~~ 400 (424)
T 7odc_A 325 SFNCILYDHAH----VKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGF 400 (424)
T ss_dssp TTHHHHHSCCC----CCCEESSCCCTTCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGC
T ss_pred ChhhHhhccCc----cceeeecCCCCCCCeeeEEEECCCCCCCCEecccccCCCCCCCCEEEECCCCCCchhhccCCCCC
Confidence 99888772211 22322211 12234578999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEE
Q 045356 404 NTAAIPTY 411 (419)
Q Consensus 404 ~~~~~~~~ 411 (419)
++|.++.+
T Consensus 401 ~~p~~v~~ 408 (424)
T 7odc_A 401 QRPNIYYV 408 (424)
T ss_dssp CCCEEEEE
T ss_pred CCCeEEEE
Confidence 99987433
No 2
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.2e-65 Score=521.39 Aligned_cols=377 Identities=40% Similarity=0.712 Sum_probs=327.4
Q ss_pred ceeeecCCCCHHHHHHHHHhhc--CCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEE
Q 045356 25 RVPTITKDGGLLEFMESIILKR--QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDC 102 (419)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~--~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~V 102 (419)
++..+++..++.+++++++... +..+||+|+||+++|++|+++|++.+++.+++|++|||+++.|++++.+.|.||+|
T Consensus 20 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~tP~~viDl~~l~~n~~~l~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dv 99 (471)
T 2oo0_A 20 DCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDC 99 (471)
T ss_dssp CEEEECTTCCHHHHHHHHHHHTTTSSCCCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEEE
T ss_pred cEEEecCCCCHHHHHHHHHHhhhcCCCCCcEEEEEHHHHHHHHHHHHHhCCCCeEEEEEeeCCCHHHHHHHHHcCCcEEE
Confidence 4667778889999999999875 35899999999999999999999999989999999999999999999999999999
Q ss_pred cCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCC
Q 045356 103 ASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDS 182 (419)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~s 182 (419)
+|.+|++.++++|+++++|+|+||.|++++++.|+++|+..+++||++|++++.+.++..+|+|||+++... .....++
T Consensus 100 aS~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~V~lRvn~g~~~-~~~~~~~ 178 (471)
T 2oo0_A 100 ASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK-AVCRLSV 178 (471)
T ss_dssp CSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEECCCCTT-SSBCCTT
T ss_pred eCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHhCCCCeEEEEEcCCCCC-CCCCCCC
Confidence 999999999999999999999999999999999999999767999999999999998889999999997542 1233469
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC----CC
Q 045356 183 KFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN----PG 258 (419)
Q Consensus 183 RfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~----~~ 258 (419)
|||++++++.++++.+++.++++.|+|+|+||++.+.+.+.++++++.++++.+++.| .++++||+||||+.. ++
T Consensus 179 RfG~~~~~~~~~~~~~~~~~l~l~Glh~H~gs~~~~~~~~~~a~~~~~~~~~~~~~~G-~~~~~ldiGGG~~~~~~~~~~ 257 (471)
T 2oo0_A 179 KFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVG-FSMYLLDIGGGFPGSEDVKLK 257 (471)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEEEEECCCBSCCCTHHHHHHHHHHHHHHHHHHHHT-CCCCEEECCCCCCSSSSSSSC
T ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEECCCcCCCCCCCCC
Confidence 9999999999999888777999999999999998888899999999999999999999 799999999999762 56
Q ss_pred HHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeC--------------CceEEEEecCCCC
Q 045356 259 FHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRD--------------ELREYWINDGKYG 324 (419)
Q Consensus 259 ~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~--------------~~~~~~i~dg~~~ 324 (419)
++.+++.|+..+.+|++.. +.+++++||||+++++||+|+++|+++|... ...+|++++|+++
T Consensus 258 ~~~~~~~i~~~l~~~~p~~---~~~~li~EpGR~~v~~ag~l~t~V~~vK~~~~~~v~y~~~~~~~~~~~~~~i~~G~~~ 334 (471)
T 2oo0_A 258 FEEITGVINPALDKYFPSD---SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYG 334 (471)
T ss_dssp HHHHHHHHHHHHHHHSCGG---GTCEEEECCSHHHHGGGEEEEEEEEEEEEEC-------------CCEEEEEESCCTTT
T ss_pred HHHHHHHHHHHHHHHhccc---CCcEEEecCccceecCcEEEEEEEEEEEecCccccccccccccCCceEEEEEECCccc
Confidence 8999999999999998742 2379999999999999999999999999853 1356889999988
Q ss_pred CcchhhhHHHHhhcceeeec-ccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCC
Q 045356 325 SFGWLSSEEVIAKCGAHILA-SASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGF 403 (419)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~ 403 (419)
++++.+|... ++.++. .........++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+|||+
T Consensus 335 ~~~~~L~~~~----~~~~vl~~~~~~~~~~~~~~I~G~~C~s~D~l~~d~~lp~l~~GD~l~~~~~GAY~~s~~s~fN~~ 410 (471)
T 2oo0_A 335 SFNCILYDHA----HVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGF 410 (471)
T ss_dssp GGGHHHHSCC----CCCCEESSCCCTTCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGC
T ss_pred chhhHhhccC----cceeeeccCCCCCCCeeEEEEECCCCCCCCEEeeccCCCCCCCCCEEEEeCCCcchhhhhccccCC
Confidence 8887765110 011222 11111123478999999999999999999999999999999999999999999999999
Q ss_pred CCCCccE
Q 045356 404 NTAAIPT 410 (419)
Q Consensus 404 ~~~~~~~ 410 (419)
++|.+++
T Consensus 411 ~~p~~v~ 417 (471)
T 2oo0_A 411 QRPTIYY 417 (471)
T ss_dssp CCCEEEE
T ss_pred CCCeEEE
Confidence 9997643
No 3
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=100.00 E-value=6.6e-65 Score=517.71 Aligned_cols=378 Identities=35% Similarity=0.639 Sum_probs=319.6
Q ss_pred ceeeecCCCCHHHHHHHHHhhc-CCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEc
Q 045356 25 RVPTITKDGGLLEFMESIILKR-QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCA 103 (419)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~-~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~Va 103 (419)
++..+++.-.+.+++++++.+. ...+||+|+||+++|++|+++|++.+++.+++|++|||+++.|++++.+.|.||+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tP~~vid~~~l~~n~~~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~~va 90 (448)
T 3btn_A 11 SVGLLDEGTNLGNVIDNYVYEHTLTGKNAFFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCNSTPAVLEILAALGTGFACS 90 (448)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHSSCCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEEES
T ss_pred eEEEecCCCcHHHHHHHHHHhcccCCCCCEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEEe
Confidence 3556777888999999998764 348999999999999999999999999899999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCC
Q 045356 104 SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSK 183 (419)
Q Consensus 104 S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~sR 183 (419)
|.+|++.++++|+++++|+|+||.|++++++.|+++|+..+++||++|++++.+.++..+++|||+++.+. .....++|
T Consensus 91 S~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lRin~g~~~-~~~~~~~R 169 (448)
T 3btn_A 91 SKNEMALVQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNI-GGEDGNMK 169 (448)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTTCEEEEEBCCCC---------CC
T ss_pred CHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHHhCCCCeEEEEEecCCCc-cCCCCCCc
Confidence 99999999999999999999999999999999999998767999999999999988889999999997542 12233599
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCC-CHHHH
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNP-GFHEA 262 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~-~~~~~ 262 (419)
||++++++.++++.+++.++++.|+|+|+||++.+.+.+.++++++..+++.+++.| .++++||+||||+..+ +++.+
T Consensus 170 fG~~~~~~~~~~~~~~~~~l~~~Gl~~H~gs~~~d~~~~~~~~~~~~~~~~~~~~~G-~~~~~ldiGGG~~~~~~~~~~~ 248 (448)
T 3btn_A 170 FGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFG-FTMNMLDIGGGFTGTEIQLEEV 248 (448)
T ss_dssp CCBCHHHHHHHHHHHHHHTCEEEEEECCCCTTCCCTTHHHHHHHHHHHHHHHHHHTT-CCCCEEECCSCCCSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEeCCCcCCCCCCHHHH
Confidence 999999999988887766999999999999998788889899999999999899999 7999999999995422 57889
Q ss_pred HHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC---------------ceEEEEecCCCCCcc
Q 045356 263 ASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE---------------LREYWINDGKYGSFG 327 (419)
Q Consensus 263 ~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~---------------~~~~~i~dg~~~~~~ 327 (419)
++.++..+.+|++.. ..+++++||||+++++||+|+++|+++|.... ..+|++++|++.+++
T Consensus 249 ~~~v~~~i~~~~p~~---~~~~l~~EpGR~~v~~ag~l~t~V~~vK~~~~g~~vsyg~~~~~~~~~~~~~i~~G~~d~~~ 325 (448)
T 3btn_A 249 NHVISPLLDIYFPEG---SGIQIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFA 325 (448)
T ss_dssp HHHHHHHHHHHSCTT---SCCEEEECCSHHHHTTTEEEEEEEEEEEEC-----------------CEEEEESCCTTTTTG
T ss_pred HHHHHHHHHHHhccc---CCcEEEEeCCcceeeeeEEEEEEEEEEEecccccccccccccccCCceEEEEEccccccccc
Confidence 999999999997642 23799999999999999999999999998431 124678899988888
Q ss_pred hhhhHHHHhhccee-eecccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCC
Q 045356 328 WLSSEEVIAKCGAH-ILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTA 406 (419)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~ 406 (419)
+.+|.... +. ++..........++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+|||+++|
T Consensus 326 ~~l~~~~~----~~~vl~~~~~~~~~~~~~~v~G~~C~s~D~l~~d~~lp~l~~GD~l~~~~~GAY~~~~~s~fN~~~~p 401 (448)
T 3btn_A 326 SKLSEDLN----TIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 401 (448)
T ss_dssp GGGC--------CCCEECCC-----CEEEEEEECTTCSTTCEEEEEEEEECCCTTCEEEESSCCSSCCCCCCGGGTTCCC
T ss_pred hhhhccCc----ceeeeccCCCCCCCceEEEEECCCCCCCCEEeeccccCCCCCCCEEEEcCCCCCchhhcccccCCCCC
Confidence 88762111 11 22121111123478999999999999999999999999999999999999999999999999999
Q ss_pred CccEE
Q 045356 407 AIPTY 411 (419)
Q Consensus 407 ~~~~~ 411 (419)
.++++
T Consensus 402 ~~v~~ 406 (448)
T 3btn_A 402 AIYFM 406 (448)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76443
No 4
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=1.2e-64 Score=514.59 Aligned_cols=350 Identities=24% Similarity=0.365 Sum_probs=297.5
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCCC--CceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcC
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLPM--VHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~~--~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
+++||+|+||+++|++|++++++.+++ ++++|++|||+++.|++.+.+.|+||+|+|.+|++.++++|+++++|+|+|
T Consensus 46 ~~~tP~~vid~~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dvaS~~E~~~~~~~G~~~~~I~~~g 125 (443)
T 3vab_A 46 AVGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSG 125 (443)
T ss_dssp HHCSSEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEEEC
T ss_pred hcCCCEEEEEHHHHHHHHHHHHHhhccCCcEEEEEeccCCCHHHHHHHHHcCCcEEEeCHHHHHHHHHcCCChhhEEEcC
Confidence 368999999999999999999999975 899999999999999999999999999999999999999999988999999
Q ss_pred CCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHC----CCCeEEEEEecCCCC--CCCCCCC---CCCCCCHHHHHHHHH
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWH----PKCELLIRIKSPVDG--GARYPLD---SKFGANPEEVAHLLG 196 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~----~~~~v~lRv~~~~~~--g~~~~~~---sRfGi~~ee~~~~l~ 196 (419)
|.|++++++.|+++|+..++|||++|++++.+.+ +..+|+|||+++.+. +.+++++ +|||++++++.++++
T Consensus 126 ~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~a~~~~~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi~~~e~~~ll~ 205 (443)
T 3vab_A 126 VGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYA 205 (443)
T ss_dssp TTCCHHHHHHHHHHTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEECCBCTTTCCBC---CCCCSSSEEGGGHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhcCCCceEEEEECCCCCCCCCcccccCCCCCCCcCCHHHHHHHHH
Confidence 9999999999999999767999999999998763 458999999997643 2345544 899999999999998
Q ss_pred HHHh-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC--------CCHHHHHHHHH
Q 045356 197 AAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN--------PGFHEAASIIK 267 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~--------~~~~~~~~~i~ 267 (419)
.+++ .++++.|||+|+||+..+.+.+.++++++.++++.+++.| .++++||+||||+++ ++++++++.|+
T Consensus 206 ~~~~~~~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G-~~l~~ldiGGG~~i~y~~~~~~~~~~~~~~~~i~ 284 (443)
T 3vab_A 206 RAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAELVKELQADG-HNIRHVDVGGGLGIPYRTPNTPPPPPVAYAQIVA 284 (443)
T ss_dssp HHHHSTTEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTT-CCCCEEECCCCBCCCCCCC---CCCHHHHHHHHH
T ss_pred HHhhCCCceEEEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEeCCCcccCcCCCCCCCCCHHHHHHHHH
Confidence 8877 4799999999999998899999999999999999999889 899999999999972 36788888888
Q ss_pred HHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCC-CCCcchhhhHHHHhhcceeeeccc
Q 045356 268 DAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGK-YGSFGWLSSEEVIAKCGAHILASA 346 (419)
Q Consensus 268 ~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~-~~~~~~~~~~~~~~~~~~~~~~~~ 346 (419)
+.+.++ + ++|++|||||++++||+|+++|+++|..+ +++|++.|+. ...+.+.+|... ....|+...
T Consensus 285 ~~~~~~-----~---~~l~~EPGR~lva~ag~lv~~V~~~K~~~-~~~~~~vD~gm~~~~rp~ly~~~---~~~~~~~~~ 352 (443)
T 3vab_A 285 KHIKPL-----G---LKTVFEPGRLIVGNAGLLVTEVIFVKEGD-AKNFVIVDAAMNDLIRPTLYDAF---HDIRPVIMP 352 (443)
T ss_dssp HHHGGG-----C---SEEEECCSHHHHGGGEEEEEEEEEEEECS-SCEEEEESCCTTTCCHHHHHCCC---CCEEESBCC
T ss_pred HHHHhc-----C---CEEEEecCHHHhhcccEEEEEEEEEEecC-CeeEEEEccccccccchHHhCcc---ceeEEcccC
Confidence 777653 2 78999999999999999999999999864 3678777763 222333333110 012344321
Q ss_pred CCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccEE
Q 045356 347 SHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTY 411 (419)
Q Consensus 347 ~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~~ 411 (419)
. ......+++|+||+|+++|+|.+++.+|++++||+|+|.++|||+++|+|+|||+|+|+++++
T Consensus 353 ~-~~~~~~~~~v~Gp~C~s~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~ss~fN~~~~p~~v~v 416 (443)
T 3vab_A 353 N-DNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYNSRLLIPEVLG 416 (443)
T ss_dssp C-TTSCEEEEEEECSSSSTTCEEEEEEEEECCCTTCEEEEESCTTTTGGGCCCGGGCCCCCEEEE
T ss_pred C-CCCCceEEEEEccCCCCCCEEeeccCcCCCCCCCEEEEeCCCcCchhhhccccCCCCCcEEEE
Confidence 1 123467899999999999999999999999999999999999999999999999999997543
No 5
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=100.00 E-value=1.2e-63 Score=505.87 Aligned_cols=369 Identities=41% Similarity=0.734 Sum_probs=312.6
Q ss_pred CCCCHHHHHHHHHhhc-CCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHH
Q 045356 31 KDGGLLEFMESIILKR-QELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQ 109 (419)
Q Consensus 31 ~~~~~~~~~~~~~~~~-~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~ 109 (419)
..-.+.+++++++... .+++||+|+||+++|++|+++|++.+++.+++|++|||+++.|++.+.+.|.+|+|+|.+|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~tP~~vidl~~l~~n~~~~~~~~~~~~~~~avKAn~~~~v~~~l~~~G~g~~vas~~E~~ 96 (425)
T 1f3t_A 17 EGFNTRDALCKKISMNTCDEGDPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96 (425)
T ss_dssp CCSSHHHHHHHHCC------CCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHH
T ss_pred cCCcHHHHHHHHHHhcccCCCCcEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEEeCHHHHH
Confidence 5677889999988664 348999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCHH
Q 045356 110 AVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPE 189 (419)
Q Consensus 110 ~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~e 189 (419)
.++++|+++++|+|+||.|++++++.|+++|+..++|||++|++++.+.++..+++|||+++.+. .....++|||++++
T Consensus 97 ~~~~~G~~~~~iv~~g~~k~~~~l~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lrid~g~~~-~~~~~~~RfG~~~~ 175 (425)
T 1f3t_A 97 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRISTDDSL-ARCRLSVKFGAKVE 175 (425)
T ss_dssp HHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC-----------CCSCBCHH
T ss_pred HHHHcCCChhhEEEcCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCcEEEEEcCCCCC-ccCCCCCcCCCCHH
Confidence 99999999999999999999999999999999657999999999999988889999999987432 12233599999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC----CCHHHHHHH
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN----PGFHEAASI 265 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~----~~~~~~~~~ 265 (419)
++.++++.+++.++++.|+|+|+||++.+.+.+.++++++.++++.+++.| .+++++|+||||+.. ++++.+++.
T Consensus 176 ~~~~~~~~~~~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~l~iGGG~~~~~~~~~~~~~~~~~ 254 (425)
T 1f3t_A 176 DCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELG-FNMHILDIGGGFPGTRDAPLKFEEIAGV 254 (425)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCCSCCSCTHHHHHHHHHHHHHHHHHHHTT-CCCCEEECCCCCCSSTTSSSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEeCCCcCCCCCCCCCHHHHHHH
Confidence 999999888777999999999999998888888889999988999899999 799999999999763 468999999
Q ss_pred HHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeC--------------CceEEEEecCCCCCcchhhh
Q 045356 266 IKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRD--------------ELREYWINDGKYGSFGWLSS 331 (419)
Q Consensus 266 i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~--------------~~~~~~i~dg~~~~~~~~~~ 331 (419)
++..+.+|++.. +.+++++||||+++++|++|+|+|+.+|... .+.+|++++|+++++++.++
T Consensus 255 vr~~i~~~~~~~---~~~~l~~EpGR~~v~~a~~l~t~V~~vK~~~~g~~~v~g~~~~~~~~~~~~i~~G~~d~~~~~l~ 331 (425)
T 1f3t_A 255 INNALEKHFPPD---LKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILY 331 (425)
T ss_dssp HHHHHHHHSCCC---TTCEEEECCSHHHHGGGEEEEEEEEEEEEC---------------CCEEEEESCCTTTGGGHHHH
T ss_pred HHHHHHHhcCcC---CCcEEEEeCCceeeeeeEEEEEEEEEEEeccccccccccccccCcceEEEEEeccccccchhhhh
Confidence 999999998742 2379999999999999999999999999842 13678899998888887765
Q ss_pred HHHHhhcceeeec-ccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCc
Q 045356 332 EEVIAKCGAHILA-SASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAI 408 (419)
Q Consensus 332 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~ 408 (419)
... ++.++. .........++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+|||+++|.+
T Consensus 332 ~~~----~~~~vl~~~~~~~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~s~~s~fn~~~~p~v 405 (425)
T 1f3t_A 332 DHA----VVRPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTI 405 (425)
T ss_dssp SCC----CCCCEECSCCCTTCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGCCCCEE
T ss_pred ccc----ccceeeecCCCCCCCeeEEEEEcCCcCCCCEecccccCCCCCCCCEEEEcCCCCCchhhcccccCCCCCEE
Confidence 110 011222 1111112347899999999999999999999999999999999999999999999999999943
No 6
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=100.00 E-value=3.2e-64 Score=511.15 Aligned_cols=347 Identities=27% Similarity=0.357 Sum_probs=293.8
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCCC--CceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcC
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLPM--VHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~~--~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
+++||+|+||+++|++|+++|++.+++ .+++|++|||+++.|++++.+.|+||+|+|.+|++.++++|+++++|+|+|
T Consensus 49 ~~~TP~~vidl~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dvaS~~E~~~~~~~G~~~~~I~~~g 128 (441)
T 3n2b_A 49 QYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSG 128 (441)
T ss_dssp HHCSSEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred hcCCCEEEEEHHHHHHHHHHHHHhhccCCcEEEEEeccCCCHHHHHHHHHcCCcEEEeCHHHHHHHHHcCCCcccEEEcC
Confidence 369999999999999999999999975 799999999999999999999999999999999999999999988999999
Q ss_pred CCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--CCCCC---CCCCCCCHHHHHHHHH
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGG--ARYPL---DSKFGANPEEVAHLLG 196 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g--~~~~~---~sRfGi~~ee~~~~l~ 196 (419)
|.|++++++.|+++|+..++|||++|++++.+. .+..+|+|||+++.+.+ .++++ .+|||++++++.++++
T Consensus 129 ~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~ 208 (441)
T 3n2b_A 129 VGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYR 208 (441)
T ss_dssp TTCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHH
Confidence 999999999999999976799999999999875 46789999999976432 12333 3899999999999998
Q ss_pred HHHh-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC------CCHHHHHHHHHHH
Q 045356 197 AAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN------PGFHEAASIIKDA 269 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~------~~~~~~~~~i~~~ 269 (419)
.+++ +++++.|||+|+||+..+.+.+.++++++.++++.+++.| .++++||+||||+++ ++++++++.|++.
T Consensus 209 ~~~~~~~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G-~~l~~LdiGGG~gi~y~~~~~~~~~~~~~~i~~~ 287 (441)
T 3n2b_A 209 LAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEG-IHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDR 287 (441)
T ss_dssp HHHHCTTEEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCEEECCSCCCEEC-----CEECHHHHHHHHH
T ss_pred HHhcCCCeEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEECCCcccCCCCCCCCCHHHHHHHHHHH
Confidence 8876 5899999999999999999999999999999999999889 899999999999973 3467788888877
Q ss_pred HHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecC-CCCCcchhhhHHHHhhcceeeecccCC
Q 045356 270 IQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDG-KYGSFGWLSSEEVIAKCGAHILASASH 348 (419)
Q Consensus 270 l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
+.+++ + ++|++||||+++++||+|+|+|+++|+.+ +++|++.|+ +...+.+.+|.... ...|+..
T Consensus 288 l~~~~----~---~~l~~EPGR~lva~ag~lv~~V~~~K~~~-~~~~~~vD~gm~~~~rp~ly~~~~---~~~~~~~--- 353 (441)
T 3n2b_A 288 LERHR----D---LELIFEPGRAIAANAGVLVTKVEFLKHTE-HKNFAIIDAAMNDLIRPALYQAWQ---DIIPLRP--- 353 (441)
T ss_dssp HTTTC----C---SEEEECCSHHHHGGGEEEEEEEEEEEEC---CEEEEESCCTTTCCC-------C---CEEESSC---
T ss_pred HHhcc----C---CEEEEeCCHHHHhhccEEEEEEEEEEecC-CceEEEEccccccccchHHhCccc---ceEEccC---
Confidence 76642 2 79999999999999999999999999864 367777776 33233334441110 1334432
Q ss_pred CCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 349 SNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 349 ~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
...+..+++|+||+|+++|+|.+++.+ ++++||+|+|.+||||+++|+|+|||+|+|++++
T Consensus 354 ~~~~~~~~~v~Gp~C~s~D~l~~~~~l-~l~~GD~l~~~~~GAY~~~~ss~fN~~~~p~~v~ 414 (441)
T 3n2b_A 354 RQGEAQTYDLVGPVCETSDFLGKDRDL-VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVM 414 (441)
T ss_dssp CSSCCEEEEEECSSSSTTCEEEEEEEE-CCCTTCEEEESSCSSSSGGGCBCTTTCCCCEEEE
T ss_pred CCCCceeEEEECCcCCCCCEEeecccc-CCCCCCEEEEeCCCcCchhhhccccCCCCCcEEE
Confidence 123567899999999999999998888 7999999999999999999999999999999754
No 7
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=100.00 E-value=1.3e-62 Score=490.36 Aligned_cols=364 Identities=38% Similarity=0.661 Sum_probs=312.4
Q ss_pred HHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCC
Q 045356 36 LEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALS 115 (419)
Q Consensus 36 ~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G 115 (419)
..+++++++....++||+++||+++|++|++++++.+++++++|++|||++++|++.+.+.|++|+|+|.+|++.++++|
T Consensus 2 ~~~~~~l~~~~~~~~tP~~vidl~~l~~N~~~l~~~~~~~~~~~~vKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G 81 (372)
T 2nva_A 2 NSVVNNILKAHPHQTKSFYVSSPKIVEDLIDQWTILFPRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIG 81 (372)
T ss_dssp HHHHHHHHHHCTTCCSEEEEECHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHHT
T ss_pred cHHHHHHHHhcCCCCCCEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEEcCHHHHHHHHHcC
Confidence 45678888775568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHH
Q 045356 116 VSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLL 195 (419)
Q Consensus 116 ~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l 195 (419)
+++++|++.||.|++++++.|+++|+..++|||++|++++.+.+++.+++|||+++.+ +...++++|||++++++.+++
T Consensus 82 ~~~~~I~~~~~~k~~~~l~~a~~~~v~~~~vds~~~l~~l~~~~~~~~v~lrv~~~~~-~~~~~~~~R~G~~~~~~~~~~ 160 (372)
T 2nva_A 82 VSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPNCKMILRIRCDDP-NATVQLGNKFGANEDEIRHLL 160 (372)
T ss_dssp CCGGGEEECCSCCCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTTCEEEEEBCCCCT-TCSBCCTTTSSBCGGGHHHHH
T ss_pred CCHHHEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCeEEEEEecCCC-CCcccCCCCCCCCHHHHHHHH
Confidence 9888899999999999999999999875799999999999999888899999999865 345667799999999999999
Q ss_pred HHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCC----CHHHHHHHHHHHHH
Q 045356 196 GAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNP----GFHEAASIIKDAIQ 271 (419)
Q Consensus 196 ~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~----~~~~~~~~i~~~l~ 271 (419)
+.+++.++++.|+|+|+||++.+.+.+.++++++.++++.+++.| .+++++|+|||++..+ +++.+++.++..+.
T Consensus 161 ~~~~~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~GGg~~~~~~~~~~~~~~~~~vr~~i~ 239 (372)
T 2nva_A 161 EYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVG-HKPYILDIGGGLHADIDEGELSTYMSDYINDAIK 239 (372)
T ss_dssp HHHHHTTCCEEEEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHT-CCCCEEECCSCBCCCCC---CCCHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCcEEEeCCCCCcCCCCCCCHHHHHHHHHHHHH
Confidence 888777999999999999998888888889999999999888889 7899999999998743 36788999999999
Q ss_pred hhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCCCcchhhhHHHHhhcceeeecccCC-CC
Q 045356 272 TYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEEVIAKCGAHILASASH-SN 350 (419)
Q Consensus 272 ~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 350 (419)
.|++.. .+++++||||++++++++++|+|+++|..++.+.++++.|++.++...++... +..|+..... ..
T Consensus 240 ~y~~~~----~~~~~~epGr~~~~~a~~l~t~V~~vk~~~g~~~~~vd~G~~d~~~~~l~~~~----~~~~v~~~~~~~~ 311 (372)
T 2nva_A 240 DFFPED----TVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKS----VPTPQLLRDVPDD 311 (372)
T ss_dssp HHCCCT----TCEEEECCSHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTTCTHHHHSCC----CCCCEESSCCCTT
T ss_pred HhcCcC----CCEEEEccChhHhhceEEEEEEEEEEEEeCCcEEEEECCCccccchHhhhccc----CccceeccCccCC
Confidence 997642 26889999999999999999999999986532344455566677776654110 0112222210 11
Q ss_pred CCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCcc
Q 045356 351 NRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIP 409 (419)
Q Consensus 351 ~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~ 409 (419)
.+.++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|.++
T Consensus 312 g~~~~~~i~G~~C~~~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~~~fn~~~~p~~~ 370 (372)
T 2nva_A 312 EEYVPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVY 370 (372)
T ss_dssp CCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEESSCCSSSGGGCCCGGGCCCEEEE
T ss_pred CCcceEEEEeCCcCCCCEEcccccCCCCCCCCEEEEcCCCCCchhhhccccCCCCCcEE
Confidence 22378999999999999999999999999999999999999999999999999998764
No 8
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=100.00 E-value=1.2e-60 Score=482.73 Aligned_cols=368 Identities=31% Similarity=0.503 Sum_probs=303.0
Q ss_pred ceeeecC-CCCHHH--HHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEE
Q 045356 25 RVPTITK-DGGLLE--FMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFD 101 (419)
Q Consensus 25 ~~~~~~~-~~~~~~--~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~ 101 (419)
+++++.. .-.++. .+++++++ ++||+++||+++|++|++++++.+++++++|++|||+++.|++.+.+.|.+|+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~l~~~---~~tP~~vidl~~l~~N~~~l~~~~~~~~i~~avKAn~~~~v~~~l~~~G~g~~ 105 (419)
T 2plj_A 29 DIHSLTSPVLSAEEIHLIEASVEQ---FGAPLLLLDCDVIRQQYRALKNALPNVTLHYALKPLPHPVVVRTLLAEGASFD 105 (419)
T ss_dssp CCC----CCCCHHHHHHHHHHHHH---HCSSEEEEEHHHHHHHHHHHHHHSTTEEEEEESTTCCCHHHHHHHHHHTCEEE
T ss_pred ceeecCCCceeccChHHHHHHHHh---cCCCEEEEeHHHHHHHHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHcCCcEE
Confidence 4444443 233444 35666544 79999999999999999999999999999999999999999999999999999
Q ss_pred EcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCC
Q 045356 102 CASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLD 181 (419)
Q Consensus 102 VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~ 181 (419)
|+|.+|++.++++|+++++|++.||.|++++++.|+++|+..++|||++|++++.+.+++.+++|||+++.+ +.....+
T Consensus 106 vas~~E~~~~r~~G~~~~~Il~~g~~k~~~~l~~a~~~~v~~~~vds~~el~~l~~~a~~~~v~lrvd~g~~-~~~~~~~ 184 (419)
T 2plj_A 106 LATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSFRNS-EAFADLS 184 (419)
T ss_dssp ECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHHTCCEEEECSHHHHHTTGGGTTTCEEEEEBCC----------C
T ss_pred EeCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhcCCCCEEEEEcCCCC-CCCCCCC
Confidence 999999999999999988899999999999999999999875799999999999998888899999999743 2233346
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC-cceEEEeCCCCCCC----
Q 045356 182 SKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMT-KMRVLDIGGGFACN---- 256 (419)
Q Consensus 182 sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~ldiGGG~~~~---- 256 (419)
+|||++++++.++++.+++.++++.|+|+|+||++.+.+.+.++++++.++++.+++.| . +++++|+||||++.
T Consensus 185 ~RfG~~~~e~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~G-~~~~~~l~~GGG~~~~y~~~ 263 (419)
T 2plj_A 185 KKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERG-LPALSTLDIGGGFPVNYTQQ 263 (419)
T ss_dssp CCSCBCHHHHHHHHHHHHHTTCEEEEEECCCCTTCCCTHHHHHHHHHHHHHHHHHHHTT-CCCCCEEECCCCCCCCSSSC
T ss_pred CCCcCCHHHHHHHHHHHHhCCCcEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCCEEEECCCcCcCCCCC
Confidence 99999999999999888777999999999999998888888889999999999898888 7 89999999999874
Q ss_pred -CCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCCCcchhhhHHHH
Q 045356 257 -PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYGSFGWLSSEEVI 335 (419)
Q Consensus 257 -~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~~~~~~~~~~~~ 335 (419)
++++.+++.++..+..| +. .+++++||||+++++|++++|+|+.+|..++.+.++++.|++.++...++.. .
T Consensus 264 ~~~~~~~~~~vr~~i~~y-~~-----~~~~~~EpGr~~~~~a~~l~t~V~~vk~~~g~~~~~vd~G~~d~~~~~l~~~-~ 336 (419)
T 2plj_A 264 VMPIDQFCAPINEALSLL-PE-----TVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDD-A 336 (419)
T ss_dssp CCCHHHHHHHHHHHHTTS-CT-----TCEEEECCCHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTGGGHHHHSC-C
T ss_pred CCCHHHHHHHHHHHHHhC-CC-----CCEEEEcCCHHHhhhcEEEEEEEEEEEeECCeEEEEEcCccccchHHHHhcc-c
Confidence 46788999999999884 32 2688999999999999999999999998643234445556666776665411 0
Q ss_pred hhcceeeecccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCcc
Q 045356 336 AKCGAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIP 409 (419)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~ 409 (419)
+...+... . ..++++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|.++
T Consensus 337 ---~~~v~~~~-~-~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v 405 (419)
T 2plj_A 337 ---RYPLTTIK-Q-GGELIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTI 405 (419)
T ss_dssp ---CCCEEESC-C-SSCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEESSCSSSSGGGCBCGGGCCCCEEE
T ss_pred ---cceEEecC-C-CCCceeEEEEcCCcCCCCeeeecccCCCCCCCCEEEEeCCCCchhhhhhhhcCCCCCeEE
Confidence 01111111 1 124678999999999999999999999999999999999999999999999999998763
No 9
>3mt1_A Putative carboxynorspermidine decarboxylase prote; PSI2, MCSG, structural genomics; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=5e-62 Score=484.26 Aligned_cols=329 Identities=17% Similarity=0.188 Sum_probs=271.7
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhC--CCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCC
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNL--PMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANA 126 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~--~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp 126 (419)
++||+|+||++.|++|++++++.+ ++++++|++|||+++.|++++.+.|+||+|+|.+|++.+++. + +.+|++.||
T Consensus 2 ~gtP~yv~d~~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dvaS~~E~~~~~~~-~-~~~ii~~~~ 79 (365)
T 3mt1_A 2 IETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER-F-GKETHAYSV 79 (365)
T ss_dssp CCSSEEEEEHHHHHHHHHHHHHHHHHHCCEEEEETTTCCCGGGHHHHTTTSCEEEESSHHHHHHHHHH-T-CSEEEEEES
T ss_pred CCCCEEEEeHHHHHHHHHHHHHHHhhcCCEEEEEehhcCCHHHHHHHHHhCCeEEECCHHHHHHHHhh-C-CCceEEECC
Confidence 689999999999999999999988 489999999999999999999999999999999999999985 7 478999999
Q ss_pred CCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCC--CCCCCC---CCCCCCHHHHHHHHHHHHhc
Q 045356 127 CKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGG--ARYPLD---SKFGANPEEVAHLLGAAQAS 201 (419)
Q Consensus 127 ~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g--~~~~~~---sRfGi~~ee~~~~l~~~~~~ 201 (419)
.|++++|+.|++.|+ .+++||++||+++.+.+++.+++|||+++.+.+ .+++++ +|||++++++.+.
T Consensus 80 ~k~~~el~~a~~~g~-~i~vds~~el~~l~~~a~~~~v~lRvnp~~~~~~~~~i~tg~~~sKFG~~~~~~~~~------- 151 (365)
T 3mt1_A 80 AYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGEWDVPKVER------- 151 (365)
T ss_dssp CCCTTTHHHHHHHCS-EEEESSHHHHHHHGGGGTTSEEEEEECCC----------------CCSBCCHHHHHT-------
T ss_pred CCCHHHHHHHHHcCC-EEEECCHHHHHHHHHHhccCCEEEEEecCCCCCCCccccCCCCCCcCCCCHHHHhhh-------
Confidence 999999999999987 479999999999999998899999999976542 234443 8999999987652
Q ss_pred CC-eEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC---CCHHHHHHHHHHHHHhhCCCc
Q 045356 202 GL-AVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN---PGFHEAASIIKDAIQTYFPNE 277 (419)
Q Consensus 202 ~l-~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~---~~~~~~~~~i~~~l~~~~~~~ 277 (419)
.+ ++.|||+|+||+..+.+.|.+.++.+.++++ +.| .++++||+||||+++ ++++++++.|++.+.++
T Consensus 152 ~l~~~~Glh~HigSq~~~~~~~~~~~~~~~~~~~---~~g-~~~~~ldiGGG~~i~y~~~~~~~~~~~i~~~~~~~---- 223 (365)
T 3mt1_A 152 VMDRINGFMIHNNCENKDFGLFDRMLGEIEERFG---ALI-ARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRY---- 223 (365)
T ss_dssp TGGGCSEEEECCC--CCSHHHHHHHHHHHHHHHH---HHH-TTSSEEECCSCCCTTSTTCCHHHHHHHHHHHHHHH----
T ss_pred ccCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHH---HhC-CCCCEEEeCCCcCCCCCCCCHHHHHHHHHHHHHHh----
Confidence 34 7999999999999999999888887766554 346 789999999999984 57899999998888776
Q ss_pred cCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecC-CCCCcchhhhHHHHhhcceeeecccCCCCCCceee
Q 045356 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDG-KYGSFGWLSSEEVIAKCGAHILASASHSNNRTYRS 356 (419)
Q Consensus 278 ~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
+ ++|++||||+++++||+|+++|+++|.. +++|++.|+ ++++++..+. .+ .+|.... .....++
T Consensus 224 -~---~~l~~EPGR~lv~~ag~lv~~V~~~k~~--~~~~~~vD~g~~~~~~~~~~-~~-----~~p~l~~---~~~~~~~ 288 (365)
T 3mt1_A 224 -G---VQIYLEPGEASITKSTTLEVTVLDTLYN--GKNLAIVDSSIEAHMLDLLI-YR-----ETAKVLP---NEGSHSY 288 (365)
T ss_dssp -T---CEEEECCSHHHHTTSEEEEEEEEEEEES--SSEEEEESCCHHHHCHHHHH-TT-----CCCCCSS---CCSSEEE
T ss_pred -C---cEEEEeCchHhhccceEEEEEEEEEEEC--CcEEEEEcCccccCChHHhc-CC-----cCceecc---CCCceEE
Confidence 2 6899999999999999999999999986 367777765 4433444321 11 2333221 2356789
Q ss_pred EEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 357 TVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 357 ~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
+|+||+|+++|+|.++..+|++++||+|+|.++|||+++|+|+|||+|+|++++
T Consensus 289 ~v~Gp~C~s~D~l~~~~~~~~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~ 342 (365)
T 3mt1_A 289 MICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAI 342 (365)
T ss_dssp EEECSSCCSSCEEEEEEESSCCCTTCEEEESSCCTTSTTSCCCGGGCCCCEEEE
T ss_pred EEEeCCCCccCEEcccccCCCCCCCCEEEEecccchhhhhcccccCCCCCcEEE
Confidence 999999999999998777889999999999999999999999999999998743
No 10
>3n29_A Carboxynorspermidine decarboxylase; lyase; HET: PLP; 1.90A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.7e-61 Score=485.63 Aligned_cols=333 Identities=19% Similarity=0.185 Sum_probs=276.0
Q ss_pred CCCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEc
Q 045356 47 QELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 47 ~~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~ 124 (419)
++++||+|+||++.|++|+++|++.++ +++++|++|||+++.|++++.+.|+||+|+|.+|++.++++ + +.+|++.
T Consensus 40 ~~~~TP~yv~d~~~l~~n~~~l~~~~~~~~~~i~yAvKAN~~~~vl~~l~~~G~G~dvaS~~El~~a~~~-~-~~~Ii~~ 117 (418)
T 3n29_A 40 EKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEY-M-DKEIHTY 117 (418)
T ss_dssp TTCCSSEEEEEHHHHHHHHHHHHHHHHHHCCEEEEETTTCCCGGGHHHHHHHSCEEEESSHHHHHHHHHH-T-CSEEEEE
T ss_pred hhCCCCEEEEeHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCHHHHHHHHHcCCeEEECCHHHHHHHHhh-C-CCCEEEE
Confidence 579999999999999999999999886 89999999999999999999999999999999999999997 7 5799999
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCC--CCCCC---CCCCCCCHHHHHHHHHHHH
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGG--ARYPL---DSKFGANPEEVAHLLGAAQ 199 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g--~~~~~---~sRfGi~~ee~~~~l~~~~ 199 (419)
+|+|++++|+.|++.|+. +++||++||++|.+.+++.+++|||+++.+.+ ..+++ .+|||++++++.+.
T Consensus 118 ~~~k~~~el~~A~~~g~~-i~vds~~EL~~l~~~a~~~~v~lRvnp~~~~~~~~~i~tg~~~sKFGi~~~~~~~~----- 191 (418)
T 3n29_A 118 SPAFKEDEIGEIASLSHH-IVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENV----- 191 (418)
T ss_dssp ESSCCHHHHHHHHHHCSE-EEESSHHHHHHHGGGCTTSEEEEEBCCCCC----------CTTCCSSBCGGGGTTC-----
T ss_pred CCCCCHHHHHHHHHcCCe-EEECCHHHHHHHHHhcCCCCEEEEEeCCCCCCCCcccccCCCCCcCcCCHHHHHHh-----
Confidence 999999999999999985 79999999999999998999999999987542 23333 39999999987552
Q ss_pred hcCC-eEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC---CCHHHHHHHHHHHHHhhCC
Q 045356 200 ASGL-AVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN---PGFHEAASIIKDAIQTYFP 275 (419)
Q Consensus 200 ~~~l-~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~---~~~~~~~~~i~~~l~~~~~ 275 (419)
.+ ++.|||||+||+ .+.+.|.+.++.+.++ +.+.| .++++||+||||+++ ++++++++.|++.+.++
T Consensus 192 --~l~~l~Glh~HigSq-~~~~~~~~~~~~~~~~---~~~~g-~~l~~ldiGGGf~i~y~~~~~~~~~~~i~~~~~~~-- 262 (418)
T 3n29_A 192 --DLNAIEGLHFHALCE-ESADALEAVLKVFEEK---FGKWI-GQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKY-- 262 (418)
T ss_dssp --CCTTCCEEECCCCSS-BCHHHHHHHHHHHHHH---HGGGT-TTCSEEECCSCBCTTSTTCCHHHHHHHHHHHHHHH--
T ss_pred --hcCceEEEEEecCCC-CCHHHHHHHHHHHHHH---HHHhC-CCCCEEEeCCCcCCCCCCCCHHHHHHHHHHHHHHc--
Confidence 44 799999999999 7888888877776554 34567 799999999999984 57899999888888776
Q ss_pred CccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecC-CCCCcchhhhHHHHhhcceeeeccc--------
Q 045356 276 NETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDG-KYGSFGWLSSEEVIAKCGAHILASA-------- 346 (419)
Q Consensus 276 ~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg-~~~~~~~~~~~~~~~~~~~~~~~~~-------- 346 (419)
+ ++|++||||+++++||+|+++|+++|.. +++|++.|+ ++++++..+. .+ ++|....
T Consensus 263 ---~---~~ii~EPGR~lva~ag~lv~~V~~~K~~--~~~~~~vD~g~~~~m~d~~~-~~-----~rp~l~~a~~~~~h~ 328 (418)
T 3n29_A 263 ---G---VQVYLEPGEAVGWQTGNLVASVVDIIEN--EKQIAILDTSSEAHMPDTII-MP-----YTSEVLNARILATRE 328 (418)
T ss_dssp ---T---CEEEECCSHHHHTTSEEEEEEEEEEEES--SSEEEEESSCHHHHSHHHHH-TT-----CCCCBTTEEEEECTT
T ss_pred ---C---CEEEEeCCHHhhhhcEEEEEEEEEEEeC--CCEEEEECCcccccchhhhc-cC-----cCceeeccccccccc
Confidence 2 6899999999999999999999999986 366776665 4444554431 01 1121110
Q ss_pred ----CCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 347 ----SHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 347 ----~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
........+++|+||+|+++|+|.+...+|++++||+|+|.++|||+++|+|+|||+|+|++++
T Consensus 329 ~~~~~~~~~~~~~~~v~Gp~C~s~D~l~~~~~~~~l~~GD~l~~~~~GAY~~s~ss~fN~~~~p~~v~ 396 (418)
T 3n29_A 329 NEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLML 396 (418)
T ss_dssp CCBCCCCCTTCEEEEEECSSSCTTCEEEEEEESSCCCTTCEEEESSCSSSSGGGCCCGGGCCCCEEEE
T ss_pred cccccCCCCCceEEEEEcCCCCCCCEEeecccCCCCCCCCEEEEeCccchhHHHhccccCCCCCCEEE
Confidence 1112346789999999999999997666779999999999999999999999999999998743
No 11
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=100.00 E-value=1.7e-59 Score=476.37 Aligned_cols=359 Identities=20% Similarity=0.287 Sum_probs=297.9
Q ss_pred HHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCC
Q 045356 39 MESIILKRQELDEPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVS 117 (419)
Q Consensus 39 ~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~ 117 (419)
++++++ +++||+|+||+++|++|++++++.++ +++++|++|||+++.|++++.+.|.||+|+|.+|++.++++|++
T Consensus 8 ~~~l~~---~~~tP~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~ 84 (428)
T 2j66_A 8 ITALTK---RFETPFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGELALARHAGFS 84 (428)
T ss_dssp HHHHHH---HSCSSEEEEEHHHHHHHHHHHHHTSCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCC
T ss_pred HHHHHH---hhCCCEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeeeCCCHHHHHHHHHcCCeEEEeCHHHHHHHHHcCCC
Confidence 344543 47999999999999999999999997 89999999999999999999999999999999999999999998
Q ss_pred CCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC-CCCCC---CCCCCCCHH
Q 045356 118 PDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGG-ARYPL---DSKFGANPE 189 (419)
Q Consensus 118 ~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g-~~~~~---~sRfGi~~e 189 (419)
+.+|+|.||.|++++++.|+++++..++|||++|++++.+. .+..+|+|||+++.+.+ ..+.+ .+|||++++
T Consensus 85 ~~~I~~~g~~k~~~~i~~a~~~~v~~~~vds~~el~~l~~~a~~~~~~~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~ 164 (428)
T 2j66_A 85 AENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTARVAIRINPDKSFGSTAIKMGGVPRQFGMDES 164 (428)
T ss_dssp GGGEEECCSCCCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSSCC--CCCSSSCCCCSSSEEGG
T ss_pred cCeEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCCCccccCCCCCCCCCCHH
Confidence 88899999999999999999999855799999999999875 35689999999986532 22322 389999999
Q ss_pred HHHHHHHHHHhc-CCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHH-HHcCCCcceEEEeCCCCCCC-------CCHH
Q 045356 190 EVAHLLGAAQAS-GLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETA-ARLGMTKMRVLDIGGGFACN-------PGFH 260 (419)
Q Consensus 190 e~~~~l~~~~~~-~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~ldiGGG~~~~-------~~~~ 260 (419)
++.++++.+++. ++++.|||+|+||+..+.+.+.++++++.++++.+ ++.| .++++||+||||+++ ++++
T Consensus 165 e~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~l~~GGG~~i~y~~~~~~~~~~ 243 (428)
T 2j66_A 165 MLDAVMDAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYG-IVCECINLGGGFGVPYFSHEKALDIG 243 (428)
T ss_dssp GHHHHHHHHHHCTTEEEEEEECCCCSCBCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSEEECCCCBCCCCC--CCCCCHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEeCCCcCcCCCCCCCCCCHH
Confidence 999999888774 89999999999999888888989999999998888 4678 799999999999873 4578
Q ss_pred HHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCC-Ccchhh----hHHHH
Q 045356 261 EAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYG-SFGWLS----SEEVI 335 (419)
Q Consensus 261 ~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~-~~~~~~----~~~~~ 335 (419)
.+++.++..+..|+. . +.+.+++++||||+++++|++++|+|+++|... +++|++.|+.+. .+.+.+ |....
T Consensus 244 ~~~~~i~~~~~~~~~-~-~~~~~~l~~EpGr~~~~~ag~l~t~V~~vK~~~-g~~~~~~d~g~~~~~~~~~~~~~y~~~~ 320 (428)
T 2j66_A 244 KITRTVSDYVQEARD-T-RFPQTTFIIESGRYLLAQAAVYVTEVLYRKASK-GEVFVIVDGGMHHHAASTFRGRSMRSNY 320 (428)
T ss_dssp HHHHHHHHHHHHHHT-T-TCTTCEEEEEESHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCTTC-----------
T ss_pred HHHHHHHHHHHHHHh-c-cCCCcEEEEecCHHHHhhceEEEEEEEEEEecC-CcEEEEECCccccchhhhccchhccCcC
Confidence 899999999998864 1 134489999999999999999999999999864 378887776443 333444 42222
Q ss_pred hhcceeeec---ccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCC-CCCCCCCCCcc
Q 045356 336 AKCGAHILA---SASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGT-NFNGFNTAAIP 409 (419)
Q Consensus 336 ~~~~~~~~~---~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~-~fng~~~~~~~ 409 (419)
+..+. +.. .....++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|++ +||++++|.++
T Consensus 321 ----~~~~~~~~~~~-~~~~~~~~~i~G~~C~s~D~l~~d~~lp~~~~GD~l~~~~~GAY~~~~~s~~fn~~~~p~~v 393 (428)
T 2j66_A 321 ----PMEYIPVREDS-GRRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGAYGLSFSPVHFLGHPTPIEI 393 (428)
T ss_dssp ----CEEEEC----------CEEEEEECSSSSTTCEEEEEEEESCCCTTCEEEESSCSSSSGGGSCTTGGGCCCCEEE
T ss_pred ----cEEeecccCCC-CCCCCceEEEEcCCCCCCcEEEecccCCCCCCCCEEEEeCCCcchHHhhhhhhhCCCCCeEE
Confidence 22222 111 12345789999999999999999999999999999999999999999986 99999999864
No 12
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=100.00 E-value=1.5e-60 Score=488.48 Aligned_cols=355 Identities=20% Similarity=0.285 Sum_probs=300.0
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhC-CCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCCC
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNL-PMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANAC 127 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~-~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~ 127 (419)
++||+|+||+++|++|++++++.+ ++++++|++|||+++.|++++.+.|++|+|+|.+|+..++++|+++.+|+|.||.
T Consensus 40 ~~tP~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~I~~~g~~ 119 (467)
T 2o0t_A 40 YGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNN 119 (467)
T ss_dssp HCSSEEEEEHHHHHHHHHHHHHHTSSGGGBEEEGGGCCCHHHHHHHHHHTCEEEECSHHHHHHHHHTTCCGGGEEECCTT
T ss_pred cCCCEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeccCCCHHHHHHHHHcCCeEEEeCHHHHHHHHHcCCCcccEEEeCCC
Confidence 689999999999999999999998 5899999999999999999999999999999999999999999988899999999
Q ss_pred CCHHHHHHHHHCCCcEEEecCHHHHHHHHhHC----CCCeEEEEEecCCCCC--CC---CCCCCCCCCCH--HHHHHHHH
Q 045356 128 KPVSHIKYAASVGVNLTTFDSIQELDKIRKWH----PKCELLIRIKSPVDGG--AR---YPLDSKFGANP--EEVAHLLG 196 (419)
Q Consensus 128 k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~----~~~~v~lRv~~~~~~g--~~---~~~~sRfGi~~--ee~~~~l~ 196 (419)
|++++++.|+++|+..++|||++|++++.+.+ +..+|+|||+++.+.+ .. ....+|||+++ +++.++++
T Consensus 120 k~~~~i~~a~~~gv~~i~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~~~srfG~~~~~~e~~~~~~ 199 (467)
T 2o0t_A 120 KSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVR 199 (467)
T ss_dssp CCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCCCCCCcCCcCCHHHHHHHHH
Confidence 99999999999998667999999999998753 4679999999974321 11 12359999987 57888888
Q ss_pred HHHh-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHH-HcC----CCcceEEEeCCCCCCC-------CCHHHHH
Q 045356 197 AAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAA-RLG----MTKMRVLDIGGGFACN-------PGFHEAA 263 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~-~~g----~~~~~~ldiGGG~~~~-------~~~~~~~ 263 (419)
.+++ .++++.|||+|+||++.+.+.+.++++++.++++.++ +.| + ++++||+||||+++ +++++++
T Consensus 200 ~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~-~~~~ln~GGG~~i~y~~~~~~~~~~~~~ 278 (467)
T 2o0t_A 200 RVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTA-QIATVDLGGGLGISYLPSDDPPPIAELA 278 (467)
T ss_dssp HHHHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHST-TCCEEECCCCBCCCSSTTCCCCCHHHHH
T ss_pred HHHhCCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCccc-CCCEEEeCCCcCcCCCCCCCCCCHHHHH
Confidence 8876 5899999999999998888889999999999988875 545 3 78899999999763 4678899
Q ss_pred HHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEe----CCceEEEEec-CCCCCcchhhhHHHHhhc
Q 045356 264 SIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVR----DELREYWIND-GKYGSFGWLSSEEVIAKC 338 (419)
Q Consensus 264 ~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~----~~~~~~~i~d-g~~~~~~~~~~~~~~~~~ 338 (419)
+.|+..+.++++.+ +.+.+++++||||+++++||+|+|+|+++|.. +.+++|++.| |++.++.+.+|....
T Consensus 279 ~~v~~~i~~~~~~~-g~~~~~l~~EpGR~~v~~ag~l~t~V~~vK~~~~g~~~~~~~~~vd~g~~~~~~p~~y~~~~--- 354 (467)
T 2o0t_A 279 AKLGTIVSDESTAV-GLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQY--- 354 (467)
T ss_dssp HHHHHHHHHHHHHT-TCCCCEEEBCCSHHHHSTTEEEEEEEEEEEEEECSSSCEEEEEEESCCTTTCCHHHHHCCCC---
T ss_pred HHHHHHHHHHHHhc-CCCCCeEEeccchheeccceEEEEEEEEEeecccCCCCccEEEEEcCccccccchHHhCCcC---
Confidence 99999999776543 34557999999999999999999999999986 3346777755 577777777762221
Q ss_pred ceeeecccCCCCCCceeeEEeccCCCCCCccccCCCCC-CCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 339 GAHILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLP-ELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp-~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
...+.... .....++++|+|++||++|+++.++.+| ++++||+|+|.++|||+++|+++||++++|.+++
T Consensus 355 -~~~~~~~~-~~~~~~~~~v~G~~C~s~D~~~~d~~lp~~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~ 425 (467)
T 2o0t_A 355 -DVRLVSRV-SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVA 425 (467)
T ss_dssp -CEEECSSC-CCSCEEEEEEECSSSSTTCEEEEEEEEETTCCTTCEEEESCCSSSSSTTCBCGGGCCCCEEEE
T ss_pred -ceEecCCC-CCCCceeEEEECCCcCCCCEEEeccccCCCCCCCCEEEEcCCCcchHHHhhHhhCCCCCcEEE
Confidence 12222221 1235678999999999999999999999 9999999999999999999999999999988743
No 13
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysin barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A*
Probab=100.00 E-value=1e-58 Score=469.62 Aligned_cols=353 Identities=20% Similarity=0.299 Sum_probs=287.9
Q ss_pred HHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCC
Q 045356 38 FMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVS 117 (419)
Q Consensus 38 ~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~ 117 (419)
.+++++++ ++||+|+||+++|++|+++++ .++ +++|++|||+++.|++.+.+.|++|+|+|.+|++.++++|++
T Consensus 16 ~~~~l~~~---~~tP~~vidl~~l~~N~~~l~-~~~--~i~~avKAn~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~ 89 (425)
T 1knw_A 16 NLLRLPAE---FGCPVWVYDAQIIRRQIAALK-QFD--VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYN 89 (425)
T ss_dssp HHHHHHHH---HCSSEEEEEHHHHHHHHHTTT-TSS--EEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCC
T ss_pred hHHHHHHh---hCCCEEEEEHHHHHHHHHHHh-hCC--cceEeeecCCCHHHHHHHHHcCCeEEEcCHHHHHHHHHcCCC
Confidence 34555533 689999999999999999999 887 999999999999999999999999999999999999999999
Q ss_pred C----CcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCC--CCCCCCC---CCCCCCH
Q 045356 118 P----DRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDG--GARYPLD---SKFGANP 188 (419)
Q Consensus 118 ~----~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~--g~~~~~~---sRfGi~~ 188 (419)
+ ++|+|+||.|++++++.|+++|+. +++||++|++++.+.++..++.|||+++.+. +.+++++ +|||+++
T Consensus 90 ~~~~~~~Iv~~g~~k~~~~l~~a~~~~i~-~~vds~~el~~l~~~a~~~~v~lRv~~~~~~~~h~~i~tG~~~~RfG~~~ 168 (425)
T 1knw_A 90 PQTHPDDIVFTADVIDQATLERVSELQIP-VNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWY 168 (425)
T ss_dssp TTTCTTSEEEEESCCCHHHHHHHHHHTCC-EEESSHHHHHHHHHHSTTCEEEEEEECSCCSSCTTSCCSSSTTCCCSEEG
T ss_pred CCCCcCeEEEECCCCCHHHHHHHHHcCCE-EEECCHHHHHHHHHhhhhccEEEEECCCCCCCCCcccccCCCCCCCcCCH
Confidence 8 799999999999999999999998 7999999999999998888999999998754 3456665 9999999
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC-------CCHHH
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN-------PGFHE 261 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~-------~~~~~ 261 (419)
+++.++++.+++.++++.|+|+|+||++ +.+.+.++++++.++ +++.| .+++++|+||||+++ +++++
T Consensus 169 ~~~~~~~~~~~~~~l~l~Gl~~H~gs~~-~~~~~~~~~~~~~~~---~~~~G-~~~~~ln~GGG~~~~y~~~~~~~d~~~ 243 (425)
T 1knw_A 169 TDLPAALDVIQRHHLQLVGIHMHIGSGV-DYAHLEQVCGAMVRQ---VIEFG-QDLQAISAGGGLSVPYQQGEEAVDTEH 243 (425)
T ss_dssp GGHHHHHHHHHHTTCEEEEEECCCCCTT-CHHHHHHHHHHHHHH---HHHHT-CCCSEEECCCCCCCCCSTTCCCCCHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHH---HHHhC-CCCcEEEeCCCcccCCCCCCCCCCHHH
Confidence 9999999888766999999999999998 888888888776554 44558 799999999999863 46677
Q ss_pred HHHHHHHH---HHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecC-CCCCcchhhhHHHHhh
Q 045356 262 AASIIKDA---IQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDG-KYGSFGWLSSEEVIAK 337 (419)
Q Consensus 262 ~~~~i~~~---l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg-~~~~~~~~~~~~~~~~ 337 (419)
+++.+.+. ++..+. . + +++++||||+++++||+++|+|+++|...+ ++|++.|+ ++..+.+.+|....
T Consensus 244 ~~~~~~~~~~~i~~~~~-~-~---~~~~~EpGr~~v~~ag~l~t~V~~vk~~~~-~~~~~vd~G~~d~~~~~l~~~~~-- 315 (425)
T 1knw_A 244 YYGLWNAAREQIARHLG-H-P---VKLEIEPGRFLVAQSGVLITQVRSVKQMGS-RHFVLVDAGFNDLMRPAMYGSYH-- 315 (425)
T ss_dssp HHHHHHHHHHHHHHHHT-S-C---CEEEECCSHHHHGGGEEEEEEEEEEEEETT-EEEEEESCCTTTSCHHHHHCCCC--
T ss_pred HHHHHHHHHHHHHHHhC-C-C---CEEEEcCChHHhhhceEEEEEEEEEEecCC-cEEEEECCchhhccchhhhcccc--
Confidence 74433322 222121 1 2 789999999999999999999999998653 66666665 44455555541100
Q ss_pred cceeeecccCCCC--CCceeeEEeccCCCCCCccccC-------CCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCc
Q 045356 338 CGAHILASASHSN--NRTYRSTVFGPTCAAVDKVFTG-------HQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAI 408 (419)
Q Consensus 338 ~~~~~~~~~~~~~--~~~~~~~i~G~~C~~~D~l~~~-------~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~ 408 (419)
...++....... ...++++|+|++||++|+++.+ +.+|++++||+|+|.++|||+++|+++||++++|.+
T Consensus 316 -~~~~~~~~~~~~~~~~~~~~~v~G~~C~s~D~~~~d~~~~~~~~~lp~~~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~ 394 (425)
T 1knw_A 316 -HISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPE 394 (425)
T ss_dssp -CEEEECTTCCCCTTCCEEEEEEECSSSSTTCBSSBCTTSCBCCEEEECCCTTCEEEEESCSSSSGGGCCCTTTCCCCCE
T ss_pred -eeEecCCCCCccccCCceeEEEECCCCCCCCEEeecCCCCccceeCCCCCCCCEEEEeCCCcchHHHHhHhhCCCCCeE
Confidence 023343221110 1136899999999999999999 789999999999999999999999999999999998
Q ss_pred cEE
Q 045356 409 PTY 411 (419)
Q Consensus 409 ~~~ 411 (419)
+++
T Consensus 395 v~~ 397 (425)
T 1knw_A 395 VLF 397 (425)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 14
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=100.00 E-value=3.5e-58 Score=465.97 Aligned_cols=348 Identities=25% Similarity=0.389 Sum_probs=292.3
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcC
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
+++||+|+||+++|++|++++++.++ +++++|++|||+++.|++++.+.|+||+|+|.+|++.++++|+++.+|+|+|
T Consensus 30 ~~~tP~~vidl~~i~~N~~~l~~~~~~~~~~l~~avKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~i~~~g 109 (425)
T 2qgh_A 30 THKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKAGIKPYRIVFSG 109 (425)
T ss_dssp HCCSSEEEEEHHHHHHHHHHHHHTTCSSCEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred hhCCCEEEEEHHHHHHHHHHHHHhcCcCCCEEEEEeccCCCHHHHHHHHHcCCeEEEeCHHHHHHHHHcCCChhHEEEcC
Confidence 47999999999999999999999997 5699999999999999999999999999999999999999999988999999
Q ss_pred CCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--CCCCC---CCCCCCCHHHHHHHHH
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGG--ARYPL---DSKFGANPEEVAHLLG 196 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g--~~~~~---~sRfGi~~ee~~~~l~ 196 (419)
|.|++++++.|+++|+..++|||++|++++.+. .+..+|+|||+++.+.+ ..+.+ .+|||++++++.++++
T Consensus 110 ~~k~~~~i~~a~~~gv~~i~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~ 189 (425)
T 2qgh_A 110 VGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFL 189 (425)
T ss_dssp TTCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHH
Confidence 999999999999999876799999999999875 45689999999986532 23444 4999999999999998
Q ss_pred HHHhc-CCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC------CCHHHHHHHHHHH
Q 045356 197 AAQAS-GLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN------PGFHEAASIIKDA 269 (419)
Q Consensus 197 ~~~~~-~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~------~~~~~~~~~i~~~ 269 (419)
.+++. ++++.|||+|+|++..+++.+.++++++.++++.+++.| .+++++|+||||+++ ++++++++.++..
T Consensus 190 ~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~l~~GGG~~i~y~~~~~~~~~~~~~~v~~~ 268 (425)
T 2qgh_A 190 WAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALG-IDLRFFDVGGGIGVSYENEETIKLYDYAQGILNA 268 (425)
T ss_dssp HHHHCSSEEEEEEECCCBSSBCCHHHHHHHHHHHHHHHHHHHHTT-CCCCEEECCCCBCCCTTSCCCCCHHHHHHHHHHH
T ss_pred HHHhCCCccEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEECCCcCcCCCCCCCCCHHHHHHHHHHH
Confidence 88774 999999999999998888889999999999999888888 799999999999763 4578888888877
Q ss_pred HHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCC-CCcchhhhHHHHhhcceeeecccCC
Q 045356 270 IQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKY-GSFGWLSSEEVIAKCGAHILASASH 348 (419)
Q Consensus 270 l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
+..+ + +++++||||+++++|++++|+|+.+|...+ ++|++.|+.| ..+...+|.... ...++ .. .
T Consensus 269 i~~~-----~---~~~~~EpGr~~~~~a~~l~t~V~~vk~~~~-~~~~~vd~G~~d~~~~~l~~~~~---~~~~~-~~-~ 334 (425)
T 2qgh_A 269 LQGL-----D---LTIICEPGRSIVAESGELITQVLYEKKAQN-KRFVIVDAGMNDFLRPSLYHAKH---AIRVI-TP-S 334 (425)
T ss_dssp TTTC-----C---CEEEECCCHHHHTTTEEEEEEEEEEEC--C-CCEEEESCCTTTCCHHHHHCCCC---CEEEC-SC-C
T ss_pred Hhhc-----C---CEEEEcCchhhhhcceEEEEEEEEEEecCC-CEEEEEcCchhcccchhhcCCcc---eeeec-cC-C
Confidence 6543 1 678999999999999999999999998543 5677777644 333444331100 01233 11 0
Q ss_pred CCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 349 SNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 349 ~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
......+++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+||++++|.+++
T Consensus 335 ~~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v~ 396 (425)
T 2qgh_A 335 KGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELA 396 (425)
T ss_dssp ---CCEEEEEECSSSSTTCEEEEEEEECCCCTTCEEEECSCSSSSGGGCCCTTTCCCCEEEE
T ss_pred CCCcceEEEEECCCcCCCcEecccccCCCCCCCCEEEEeCCCCchhhhhccccCCCCCeEEE
Confidence 11225789999999999999999999999999999999999999999999999999998753
No 15
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=100.00 E-value=4.4e-58 Score=466.69 Aligned_cols=350 Identities=23% Similarity=0.309 Sum_probs=297.4
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCC--------CCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCc
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLP--------MVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDR 120 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~--------~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~ 120 (419)
++||+|+||+++|++|++++++.++ +++++|++|||+++.|++++.+.|++|+|+|.+|+..++++|+++.+
T Consensus 28 ~~tP~~vidl~~l~~n~~~l~~~~~~a~~~~~~~~~~~~avKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~ 107 (434)
T 1twi_A 28 FGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKK 107 (434)
T ss_dssp HCSSEEEEEHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGG
T ss_pred hCCCEEEEEHHHHHHHHHHHHHhhhhhhcccCCCeEEEEEEccCCCHHHHHHHHHcCCcEEEeCHHHHHHHHHCCCCCCc
Confidence 5899999999999999999999886 78999999999999999999999999999999999999999998789
Q ss_pred EEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--CCCCC---CCCCCCCHHH-
Q 045356 121 IIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGG--ARYPL---DSKFGANPEE- 190 (419)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g--~~~~~---~sRfGi~~ee- 190 (419)
|+|.||.|++++++.|+++|+..++|||++|++++.+. .+..+|+|||+++.+.+ ..+++ .+|||+++++
T Consensus 108 I~~~g~~k~~~~i~~a~~~~i~~~~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tG~~~~rfG~~~~~~ 187 (434)
T 1twi_A 108 IVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 187 (434)
T ss_dssp EEECCSSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTS
T ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCCCCCcccccCCCCCCccCChhhh
Confidence 99999999999999999999855799999999999864 45689999999986432 12223 3899999988
Q ss_pred -HHHHHHHHHh-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC-------CCHHH
Q 045356 191 -VAHLLGAAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN-------PGFHE 261 (419)
Q Consensus 191 -~~~~l~~~~~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~-------~~~~~ 261 (419)
+.++++.+++ +++++.|||+|+||+..+.+.+.++++++.++++.+++.| .+++++|+||||++. +++++
T Consensus 188 ~~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~l~~GGg~~~~y~~~~~~~~~~~ 266 (434)
T 1twi_A 188 IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEG-IEIEDVNLGGGLGIPYYKDKQIPTQKD 266 (434)
T ss_dssp HHHHHHHHHHHCSSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTT-CCCSEEECCCCBCCCSSSSSCCCCHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEECCCcCcCCCCCCCCCCHHH
Confidence 9999988877 4999999999999998888888899999999999888888 799999999999873 56788
Q ss_pred HHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCC-CcchhhhHHHHhhcce
Q 045356 262 AASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYG-SFGWLSSEEVIAKCGA 340 (419)
Q Consensus 262 ~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~-~~~~~~~~~~~~~~~~ 340 (419)
+++.++..+.+|++++ +. +++++||||+++++|++++|+|+.+|... +++|++.|+.|. .+...+|.... ..
T Consensus 267 ~~~~i~~~i~~~~~~~-g~--~~~~~EpGr~~~~~a~~l~~~V~~vk~~~-g~~~~~vd~G~~d~~~~~l~~~~~---~~ 339 (434)
T 1twi_A 267 LADAIINTMLKYKDKV-EM--PNLILEPGRSLVATAGYLLGKVHHIKETP-VTKWVMIDAGMNDMMRPAMYEAYH---HI 339 (434)
T ss_dssp HHHHHHHHHHTTTTTS-CC--CEEEECCSHHHHGGGEEEEEEEEEEEECS-SCEEEEESCCTTTCCHHHHHCCCC---CE
T ss_pred HHHHHHHHHHHHHhhc-CC--eEEEEccChHhhhhceEEEEEEEEEEecC-CcEEEEEcCchhcccchHHhcccc---ee
Confidence 9999999999988643 22 68899999999999999999999999864 367887777544 33434431100 01
Q ss_pred eeecccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 341 HILASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 341 ~~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
.++.. .... ++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+||++++|.+++
T Consensus 340 ~~~~~---~~~~-~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v~ 405 (434)
T 1twi_A 340 INCKV---KNEK-EVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVL 405 (434)
T ss_dssp EESBC---CSCE-EEEEEECSSSCTTCEEEEEEEEECCCTTCEEEEECCSSSSGGGCBCTTTCCCCEEEE
T ss_pred EecCC---CCCC-ceEEEECCCCCCCCEEeeccCCCCCCCCCEEEEeCCCcchHhhhhhhhCCCCCeEEE
Confidence 22221 1122 789999999999999999999999999999999999999999999999999998754
No 16
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=100.00 E-value=8.4e-58 Score=457.86 Aligned_cols=339 Identities=22% Similarity=0.337 Sum_probs=283.4
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcC
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
+++||+++||+++|++|++++++.++ +++++|++|||++++|++.+.+.|++|+|+|.+|++.++++|+++++|++.|
T Consensus 10 ~~~tP~~vidl~~l~~N~~~l~~~~~~~~~~i~~avKAn~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~Il~~~ 89 (386)
T 2yxx_A 10 IHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWNG 89 (386)
T ss_dssp HHCSSEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGEEECC
T ss_pred hcCCCEEEEEHHHHHHHHHHHHHhhccCCceEEEEEeeCCCHHHHHHHHHcCCeEEEcCHHHHHHHHHcCCChhhEEEeC
Confidence 36899999999999999999999997 4699999999999999999999999999999999999999999988899999
Q ss_pred CCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCC-CCeEEEEEecCCCCC--CCCCCC---CCCCCCHHHHHHHHHHHH
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHP-KCELLIRIKSPVDGG--ARYPLD---SKFGANPEEVAHLLGAAQ 199 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~-~~~v~lRv~~~~~~g--~~~~~~---sRfGi~~ee~~~~l~~~~ 199 (419)
|.|++++++.|+++|+..++|||.+|++++.+.++ ..++.|||+++.+.+ .++++| +|||+++++ .++++ .+
T Consensus 90 ~~k~~~~l~~a~~~~v~~~~vds~~el~~l~~~a~~~~~v~lrv~~~~~~~~h~~i~tG~~~~RfG~~~~~-~~~~~-~~ 167 (386)
T 2yxx_A 90 NGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLED-LDSFM-ER 167 (386)
T ss_dssp SCCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCTTCEEEEEEECCCCTTTSHHHHHHHHHSSSSEEGGG-HHHHH-HH
T ss_pred CCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhcCcCCeEEEEECCCCCCCCCcccccCCCCCCCCCChhH-HHHHh-hc
Confidence 99999999999999985579999999999999887 489999999986542 234443 899999988 88888 55
Q ss_pred hcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCC-----CCHHHHHHHHHHHHHhhC
Q 045356 200 ASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACN-----PGFHEAASIIKDAIQTYF 274 (419)
Q Consensus 200 ~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~-----~~~~~~~~~i~~~l~~~~ 274 (419)
..++++.|+|+|+||++.+.+.+.++++++.++.+.+ +++++|+||||+.+ ++++.++++++..+..|
T Consensus 168 ~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l------~~~~~n~GGG~~~~~~~~~~~~~~~~~~vr~~i~~y- 240 (386)
T 2yxx_A 168 FRSMNIRGLHVHIGSQITRVEPFVEAFSKVVRASERY------GFEEINIGGGWGINYSGEELDLSSYREKVVPDLKRF- 240 (386)
T ss_dssp HTTSCEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHH------TCSEEECCCCBCCCSSSCCCCHHHHHHHTGGGGTTC-
T ss_pred cCCCcEEEEEEECCCCCCCHHHHHHHHHHHHHHHHhC------CCCEEEECCCcCcCCCCCCCCHHHHHHHHHHHHHhC-
Confidence 6799999999999999877778888888877776655 35689999999874 35677888887766554
Q ss_pred CCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCC-CcchhhhHHHHhhcceeeecccCCCCCCc
Q 045356 275 PNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYG-SFGWLSSEEVIAKCGAHILASASHSNNRT 353 (419)
Q Consensus 275 ~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
+++++||||++++++++++|+|+++|... +++|++.|+.|. ++...+|.... ...++.. . ..+
T Consensus 241 --------~~~~~epGr~~~~~a~~l~t~V~~vk~~~-g~~~~~vd~G~~d~~~~~l~~~~~---~~~~i~~--~--~~~ 304 (386)
T 2yxx_A 241 --------KRVIVEIGRYIVAPSGYLLLRVVLVKRRH-NKAFVVVDGGMNVLIRPALYSAYH---RIFVLGK--Q--GKE 304 (386)
T ss_dssp --------SEEEEEECHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCCHHHHTCCCC---CEEETTC--C--CCS
T ss_pred --------CeEEecCcceeeccccEEEEEEEEEEecC-CcEEEEEeCccccccchHHhcccC---ceEeccC--C--CCc
Confidence 16889999999999999999999999864 367887776554 33333331100 0122221 1 126
Q ss_pred eeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccEE
Q 045356 354 YRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPTY 411 (419)
Q Consensus 354 ~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~~ 411 (419)
++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++|||+++|.++++
T Consensus 305 ~~~~i~G~~C~~~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~~~~ 362 (386)
T 2yxx_A 305 MRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLV 362 (386)
T ss_dssp EEEEEECSSSSTTCEEEEEEEESCCCTTCEEEESSCSSSSGGGCCCTTTCCCCEEEEE
T ss_pred eEEEEEcCCCCCCCEEeeccccCCCCCCCEEEEeCCCCchHHHhhhhhCCCCCcEEEE
Confidence 8899999999999999999999999999999999999999999999999999988543
No 17
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=100.00 E-value=2.7e-55 Score=444.46 Aligned_cols=346 Identities=23% Similarity=0.360 Sum_probs=284.9
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCCCC
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACK 128 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k 128 (419)
++||+++||+++|++|++++++.+++.+++|++|||+++.|++.+.+.|++|+|+|.+|+..++++|+++.+|++.||.+
T Consensus 32 ~~tP~~vidl~~l~~N~~~l~~~~~~~~l~~vvKan~~~~v~~~l~~~G~~~~vas~~E~~~~~~~G~~~~~Il~~g~~~ 111 (420)
T 2p3e_A 32 FGTPLYVYSSNFIKERFEAYRKAFPDALICYAVKANFNPHLVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGK 111 (420)
T ss_dssp HCSSEEEEEHHHHHHHHHHHHHHSTTSEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEECSSCC
T ss_pred hCCCEEEEEHHHHHHHHHHHHHhCCcCeEEEEEecCCCHHHHHHHHHcCCeEEEeCHHHHHHHHHcCCChhHEEEeCCCC
Confidence 58999999999999999999999988899999999999999999999999999999999999999999877899999999
Q ss_pred CHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--CCCCCC---CCCCCCHHHHHHHHHHHH
Q 045356 129 PVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGG--ARYPLD---SKFGANPEEVAHLLGAAQ 199 (419)
Q Consensus 129 ~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g--~~~~~~---sRfGi~~ee~~~~l~~~~ 199 (419)
++++++.++++++..++|||+++++++.+. .+..+++||||++.+.+ .++++| +|||++++++.++++.++
T Consensus 112 ~~~~l~~a~~~~i~~~~vds~~~l~~l~~~a~~~~~~~~v~lRvn~~~~~~~~~~idtG~~~~R~G~~~~e~~~~~~~~~ 191 (420)
T 2p3e_A 112 TEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYAS 191 (420)
T ss_dssp CHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEEC----------------CCSCEEGGGHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCCHHHHHHHHHHHHhcCCCCcEEEEECCCCCCCCCcccccCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999865799999999999864 45689999999986542 345554 899999999999999887
Q ss_pred h-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCC-------CHHHHHHHHHHHHH
Q 045356 200 A-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNP-------GFHEAASIIKDAIQ 271 (419)
Q Consensus 200 ~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~-------~~~~~~~~i~~~l~ 271 (419)
+ +++++.|+|+|+|++..+.+.+.++++++.++++.+++.| .+++++|+|||++..+ +++.++++++.++.
T Consensus 192 ~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~l~~Ggg~~~~~~~~~~~~~~~~~~~~vr~g~~ 270 (420)
T 2p3e_A 192 KLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKG-FDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLLE 270 (420)
T ss_dssp TCTTEEEEEEECCCCSSBSSCTHHHHHHHHHHHHHHHHHHTT-CCCCEEECCCCBCCCCSTTCCCCCHHHHHHHHTTTC-
T ss_pred hCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEECCCcCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 7 4899999999999987666678889999999998888888 7899999999998743 36778888888877
Q ss_pred hhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCceEEEEecCCCC-CcchhhhHHHHhhcceeeecccCCCC
Q 045356 272 TYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELREYWINDGKYG-SFGWLSSEEVIAKCGAHILASASHSN 350 (419)
Q Consensus 272 ~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~~~~i~dg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (419)
.|. ++++.||||+++++|++++|+|+.+|... +.+|++.++.|. ++...++.... ...++...+
T Consensus 271 ~yg--------~~~~~e~Gr~~~~~a~~l~t~Vi~vk~~~-g~~~a~v~~G~~dg~~~~l~~~~~---~~v~v~~~g--- 335 (420)
T 2p3e_A 271 NVK--------AKIILEPGRSIMGNAGILITQVQFLKDKG-SKHFIIVDAGMNDLIRPSIYNAYH---HIIPVETKE--- 335 (420)
T ss_dssp -CC--------SEEEECCSHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCCHHHHHCCCC---CEEESBCCC---
T ss_pred hcC--------CEEEEeCCHHHHhhceEEEEEEEEEEecC-CcEEEEEcCchhcccchhhhCccc---eeEecCCCC---
Confidence 762 56789999999999999999999999864 367877776554 33333321000 013332111
Q ss_pred CCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCCcccccCCCCCCCCCCCCccE
Q 045356 351 NRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMGAYTTACGTNFNGFNTAAIPT 410 (419)
Q Consensus 351 ~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~ 410 (419)
...++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+|||+++|.+++
T Consensus 336 ~~~~~~~i~G~~Cms~D~~~~d~~lp~~~~GD~v~~~~~gAY~~~~~s~fn~~~~p~~~~ 395 (420)
T 2p3e_A 336 RKKVVADIVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPRAAEVL 395 (420)
T ss_dssp ---CEEEEECSSSSTTCEEEEEEECCCCCTTCEEEECSCTTTTGGGCBCGGGCCCCEEEE
T ss_pred CCceeEEEEccCCCCccEEeecccCCCCCCCCEEEEeCCCcchhhhhhhhhcCCCCeEEE
Confidence 123689999999999999999999999999999999999999999999999999998754
No 18
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.6e-49 Score=411.11 Aligned_cols=367 Identities=19% Similarity=0.282 Sum_probs=294.6
Q ss_pred CCHHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHcC----C
Q 045356 33 GGLLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLP----------MVHPYYAVKCNPEPAILETLAALG----S 98 (419)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~----------~~~i~~avKan~~~~v~~~l~~~G----~ 98 (419)
-.+.++++++... .++||+|++|++.|++|++++++.++ +++++|++|||+++.|++.+.+.| +
T Consensus 29 v~l~~l~~~l~~~--~~gTP~yV~D~d~L~~ni~~l~~af~~a~~~~~y~g~~~i~YAVKAN~~~~Vl~~L~~~Ga~~g~ 106 (619)
T 3nzp_A 29 PAIIDIVKELRDD--GYKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNY 106 (619)
T ss_dssp CBHHHHHHHHHHT--TCCSCEEEECHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEGGGCCCHHHHHHHHHHTGGGTC
T ss_pred CCHHHHHHHHHhc--CCCCCEEEEcHHHHHHHHHHHHHHHHHHhhhcccCCCEEEEEEEeccCcHHHHHHHHHhCCCCCc
Confidence 3577888887654 79999999999999999999998875 368999999999999999999987 7
Q ss_pred cEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHH---HCCCc-EEEecCHHHHHHHHhHC-----CCCeEEEEEe
Q 045356 99 NFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAA---SVGVN-LTTFDSIQELDKIRKWH-----PKCELLIRIK 169 (419)
Q Consensus 99 g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~---~~gi~-~i~vdS~~el~~i~~~~-----~~~~v~lRv~ 169 (419)
||+|+|..|+..++++|+++..|+++| .|++++++.|+ +.|.. .++|||++|++++.+.+ +..+|+|||+
T Consensus 107 G~dvaS~~El~~al~aG~~~~~Iv~nG-~K~~e~I~~Al~a~~~g~~v~ivVDS~~ELe~l~~~a~~~g~~~~~V~LRIn 185 (619)
T 3nzp_A 107 GLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVR 185 (619)
T ss_dssp EEEECSHHHHHHHHHHSCTTSEEEECS-CCCHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTSCSCCCEEEEEBC
T ss_pred eEEEeCHHHHHHHHhcCCCCCEEEeCC-CCCHHHHHHHHhhhhcCCcEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEEe
Confidence 999999999999999999887787776 59999999987 55554 47999999999998864 6688999999
Q ss_pred cCCC-CCCCCCCC---CCCCCCHHHHHHHHHHHHhc-CC-eEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC-
Q 045356 170 SPVD-GGARYPLD---SKFGANPEEVAHLLGAAQAS-GL-AVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMT- 242 (419)
Q Consensus 170 ~~~~-~g~~~~~~---sRfGi~~ee~~~~l~~~~~~-~l-~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~- 242 (419)
+... .|.+.+++ +|||++++++.++++.+++. .+ .+.|||||+||+..+.+.+.++++++.++++.+++.| .
T Consensus 186 p~~~g~~~~~~TGg~~sKFGi~~ee~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~al~~~~~l~~~L~~~G-~~ 264 (619)
T 3nzp_A 186 LHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMG-AK 264 (619)
T ss_dssp CTTC-------------CCSBCHHHHHHHHHHHHHTTCTTTEEEEECCCCSCBCCSHHHHHHHHHHHHHHHHHHHTT-CT
T ss_pred cCCCCCcccccCCCCCccCcCCHHHHHHHHHHHHhCCCCCceeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 8632 12334443 89999999999999988875 46 5999999999999999999999999999999999899 7
Q ss_pred cceEEEeCCCCCCC-----------CCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeC
Q 045356 243 KMRVLDIGGGFACN-----------PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRD 311 (419)
Q Consensus 243 ~~~~ldiGGG~~~~-----------~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~ 311 (419)
++++||+|||||++ ++++++++.|...+++++++. +.+.++|++||||+++++||+|+|+|+++|...
T Consensus 265 ~l~~LDiGGG~gI~Y~~~~~~~s~~~~l~eya~~I~~~l~~~~~~~-~~~~p~Ii~EPGR~iva~aGvLvt~Vi~vk~~~ 343 (619)
T 3nzp_A 265 NLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQK-KDLEPDIFIESGRFVAANHAVLIAPVLELFSQE 343 (619)
T ss_dssp TCCEEEEESCBCCCCCCSSSCCSCSSCHHHHHHHHHHHHHHHHHHT-TCCCCEEEECCCHHHHGGGEEEEEEEEEEECCC
T ss_pred CCCEEEeCCCcCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHHhc-CCCCCEEEEeccHHHHHhhhhEEEEEEEEecCC
Confidence 99999999999983 468899999999998877543 345689999999999999999999999988632
Q ss_pred C-------------------------------------------------------------------------------
Q 045356 312 E------------------------------------------------------------------------------- 312 (419)
Q Consensus 312 ~------------------------------------------------------------------------------- 312 (419)
.
T Consensus 344 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~d~~~~~~~~~~~f~~g~~~l~~ra~~e~l~~~~~~~~~~~~~~~ 423 (619)
T 3nzp_A 344 YAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDK 423 (619)
T ss_dssp CCGGGSCCCSSCCHHHHHHHHHHHHCCTTTHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CcccccCCCccccHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1
Q ss_pred -------------ceEEEEecCCCCCcchhhhHHHHhh-----cceeeecccCCCCCCceeeEEeccCCCCCCccc--cC
Q 045356 313 -------------LREYWINDGKYGSFGWLSSEEVIAK-----CGAHILASASHSNNRTYRSTVFGPTCAAVDKVF--TG 372 (419)
Q Consensus 313 -------------~~~~~i~dg~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~G~~C~~~D~l~--~~ 372 (419)
..+|++|-++..| .|+.| |+..|+....+ .+..++.|.+-||+|.+.+- ..
T Consensus 424 ~~~~~~~~l~~~~~~~y~~n~S~fqs-------lpD~W~i~q~fpi~Pi~rl~e--~p~~~~~l~diTCDsdg~i~~~~~ 494 (619)
T 3nzp_A 424 QNPADLLAIQDEVQERYLVNFSLFQS-------MPDFWGLEQNFPIMPLDRLDE--EPTRSASIWDITCDSDGEISYSKD 494 (619)
T ss_dssp -----------CCSBEEEESSCTTTT-------CHHHHHSSCCCCEEESSCTTS--CCCCBBCCEESCSCTTSBCCCCSS
T ss_pred ccchhHHHHHHHhhHHheeeehhhcc-------CcchhhcCcccceeeccccCC--CcceeeEEecccccCCCccccCCc
Confidence 1223333332222 35555 34556655432 46688999999999998843 32
Q ss_pred --CCCCCCC---CCCEEEEcCCCcccccCCCCCCCCCCCCccEEEE
Q 045356 373 --HQLPELE---VSDWLVFSDMGAYTTACGTNFNGFNTAAIPTYVV 413 (419)
Q Consensus 373 --~~lp~l~---~GD~lv~~~~GAY~~~~~~~fng~~~~~~~~~~~ 413 (419)
++||+++ ..-+|.|+.+|||+..++...|-|..|..+...+
T Consensus 495 ~~l~lh~~~~~~~~y~lg~fl~GAYQe~lg~~HnLfg~~~~v~v~~ 540 (619)
T 3nzp_A 495 KPLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISI 540 (619)
T ss_dssp SCCBCCCCCTTTSCCEEEECSCSSSTTTTCCCTTSCCCCEEEEEEE
T ss_pred ccccCCCCCCCCCCcEEEEEccchHHHHHhhccccCCCCCEEEEEE
Confidence 3455776 4468999999999999999999999988765554
No 19
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=100.00 E-value=1.9e-48 Score=407.73 Aligned_cols=366 Identities=21% Similarity=0.273 Sum_probs=293.2
Q ss_pred CHHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHcC--CcEE
Q 045356 34 GLLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLP----------MVHPYYAVKCNPEPAILETLAALG--SNFD 101 (419)
Q Consensus 34 ~~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~----------~~~i~~avKan~~~~v~~~l~~~G--~g~~ 101 (419)
.+.++++++.. ++++||+|++|++.|++|+++++++++ +.+++|++|||+++.|++.+.+.| +||+
T Consensus 71 ~l~eLa~~l~~--~~~gTPlyV~D~d~Lr~ni~~l~~af~~a~~~~~Y~~~~~i~YAvKAN~~~~Vl~~l~~~G~~~G~d 148 (666)
T 3nzq_A 71 DLAQLVKTREA--QGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLE 148 (666)
T ss_dssp EHHHHHHHHHH--TTCCSSEEEECHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEGGGCCCHHHHHHHHTSSSCEEEE
T ss_pred CHHHHHHHHHh--ccCCCCEEEeCHHHHHHHHHHHHHHHHHhHHhhcccCCeEEEEEEeeCChHHHHHHHHHcCCCceEE
Confidence 35677766654 379999999999999999999998875 368999999999999999999999 8999
Q ss_pred EcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHH---CCCc-EEEecCHHHHHHHHhH----CCCCeEEEEEecCCC
Q 045356 102 CASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS---VGVN-LTTFDSIQELDKIRKW----HPKCELLIRIKSPVD 173 (419)
Q Consensus 102 VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~---~gi~-~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~ 173 (419)
|+|.+|+..++++|++++++++.++.|++++|+.|++ .|+. .++|||++|++++.+. ++..+|+|||++..+
T Consensus 149 vaS~gEl~~al~aG~~p~~iIv~nG~K~~eeI~~Al~~~~~G~~v~ivVDS~~ELe~L~~~A~~~g~~~~V~LRVnp~~~ 228 (666)
T 3nzq_A 149 AGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQ 228 (666)
T ss_dssp ESSHHHHHHHHHHHTTSCCEEEECSCCCHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHTTCCCCEEEEBCCSSS
T ss_pred EeCHHHHHHHHHcCCCCCcEEEEcCCCCHHHHHHHHHhhccCCCEEEEECCHHHHHHHHHHHHHcCCCceEEEEEEecCC
Confidence 9999999999999998744444445799999999985 4654 4799999999999875 356899999998754
Q ss_pred C-CCCCCCC---CCCCCCHHHHHHHHHHHHhc-CCe-EEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Q 045356 174 G-GARYPLD---SKFGANPEEVAHLLGAAQAS-GLA-VIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVL 247 (419)
Q Consensus 174 ~-g~~~~~~---sRfGi~~ee~~~~l~~~~~~-~l~-l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~l 247 (419)
. +.++.++ +|||++++++.++++.+++. ++. +.|||||+||++.+.+.+.++++++.++++.+++.| .++++|
T Consensus 229 ~~~~~i~TG~~~SKFGi~~~e~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~ai~~~~~l~~~L~~~G-~~l~~L 307 (666)
T 3nzq_A 229 GSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLG-VNIQCF 307 (666)
T ss_dssp CSSTTCSSSSSCCCSCBCHHHHHHHHHHHHHTTCTTTEEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCEE
T ss_pred CCcCccccCCCCCcCcCCHHHHHHHHHHHHhCCCCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCEE
Confidence 3 3334433 89999999999999988775 676 999999999999999999999999999999898889 899999
Q ss_pred EeCCCCCCC-------------CCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCCce
Q 045356 248 DIGGGFACN-------------PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDELR 314 (419)
Q Consensus 248 diGGG~~~~-------------~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~~~ 314 (419)
|+|||||++ ++++++++.|...+++++++. +.+.++|++||||+++++||+|+++|+++|..+...
T Consensus 308 DiGGGfgI~Y~~~~~~~~~s~~~~leeya~~I~~~l~~~~~~~-~~~~p~Ii~EPGRaiVa~aGvLvt~Vi~vK~~~~~~ 386 (666)
T 3nzq_A 308 DVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEEN-GLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTV 386 (666)
T ss_dssp ECCSCCCCCSSSSCSSSTTCCSSCHHHHHHHHHHHHHHHHHHH-TCCCCEEEECCHHHHHTTSEEEEEEEEEEECCCCCC
T ss_pred EeCCCcCCCcCCccccccccCCCCHHHHHHHHHHHHHHHHHHc-CCCCcEEEEecCHHHHHhhhEEEEEEEEEEecCCCC
Confidence 999999983 468999999999998887643 355689999999999999999999999998742100
Q ss_pred --------------------------------------------------------------------------------
Q 045356 315 -------------------------------------------------------------------------------- 314 (419)
Q Consensus 315 -------------------------------------------------------------------------------- 314 (419)
T Consensus 387 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~da~~~~~~~~~~f~~g~~~l~~ra~~e~l~~~~~~~~~~~~~~~ 466 (666)
T 3nzq_A 387 PTAPAEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQKQLDPQ 466 (666)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHSSSSCSTTHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CCCCCccccHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence
Q ss_pred -----------------EEEEecCCCCCcchhhh-HHHHhh-----cceeeecccCCCCCCceeeEEeccCCCCC----C
Q 045356 315 -----------------EYWINDGKYGSFGWLSS-EEVIAK-----CGAHILASASHSNNRTYRSTVFGPTCAAV----D 367 (419)
Q Consensus 315 -----------------~~~i~dg~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~G~~C~~~----D 367 (419)
+|++|= ..| ..|+.| |+..|+.... +.+..++.|.+-||+|. +
T Consensus 467 ~~~~~~~~~~l~~~l~~~y~~n~--------S~fqslPD~W~i~q~fpi~Pi~rl~--e~p~~~~~l~diTCDsdG~i~~ 536 (666)
T 3nzq_A 467 NRAHRPIIDELQERMADKMYVNF--------SLFQSMPDAWGIDQLFPVLPLEGLD--QVPERRAVLLDITCDSDGAIDH 536 (666)
T ss_dssp SGGGHHHHHHHHHTTCEEEEESS--------CHHHHCTHHHHSCCCCCEEESSCTT--SCCCEEEEEEESCSSTTCBCCC
T ss_pred ccCChHHHHHHHHHHhHHheeeh--------hhhccCcchhhhccccceeeccccC--CCcceeeEEeccccCCCCchhh
Confidence 111110 112 235555 3445554443 35678999999999997 3
Q ss_pred ccc-----cCCCCCCCCCC--CEEEEcCCCcccccCCCCCCCCCCCCccEEEE
Q 045356 368 KVF-----TGHQLPELEVS--DWLVFSDMGAYTTACGTNFNGFNTAAIPTYVV 413 (419)
Q Consensus 368 ~l~-----~~~~lp~l~~G--D~lv~~~~GAY~~~~~~~fng~~~~~~~~~~~ 413 (419)
++. ..++||+++.| -+|.|+.+|||+..++...|-|..|..+...+
T Consensus 537 fi~~~~~~~~l~lh~~~~~e~y~lg~Fl~GAYQe~lg~~HnLfg~~~~v~v~~ 589 (666)
T 3nzq_A 537 YIDGDGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFV 589 (666)
T ss_dssp EEETTEEESSEEECSCCTTSCCEEEECSCCSSCGGGCCCTTSCCCCEEEEEEE
T ss_pred ccCCCCccccccccccCCCCccEEEEEecchhhHHhccccccCCCCCEEEEEE
Confidence 332 13456677665 48999999999999999999999988766554
No 20
>3n2o_A ADC, biosynthetic arginine decarboxylase; lyase; HET: PLP; 2.30A {Vibrio vulnificus}
Probab=100.00 E-value=7e-48 Score=402.30 Aligned_cols=372 Identities=21% Similarity=0.279 Sum_probs=292.1
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHc-------C
Q 045356 35 LLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLP----------MVHPYYAVKCNPEPAILETLAAL-------G 97 (419)
Q Consensus 35 ~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~----------~~~i~~avKan~~~~v~~~l~~~-------G 97 (419)
+.++++++.. ++++||+|++|++.|++|++++++.++ +++++|++|||+++.|++.+.+. |
T Consensus 50 l~eLa~~l~~--~~~gTPlyV~D~d~L~~ni~~l~~af~~a~~~~~y~~~~~i~YAvKAN~~~~Vl~~l~~~G~~~~~~g 127 (648)
T 3n2o_A 50 LSKIVKQLEE--RQLNVPVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQ 127 (648)
T ss_dssp HHHHHHHHHH--TTCCSSEEEECHHHHHHHHHHHHHHHHHHHHHHTCSSCEEECEEGGGCCCHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHhh--cCCCCCEEEEeHHHHHHHHHHHHHHHHHHHHhhcccCCeEEEEEEeecCcHHHHHHHHHhCCccccCC
Confidence 5667766644 379999999999999999999998874 46899999999999999999988 5
Q ss_pred CcEEEcCHHHHHHHHHCCCCCCc-EEEcCCCCCHHHHHHHHH---CCCc-EEEecCHHHHHHHHhH----CCCCeEEEEE
Q 045356 98 SNFDCASPSEIQAVLALSVSPDR-IIYANACKPVSHIKYAAS---VGVN-LTTFDSIQELDKIRKW----HPKCELLIRI 168 (419)
Q Consensus 98 ~g~~VaS~~E~~~a~~~G~~~~~-Ii~~gp~k~~~~l~~a~~---~gi~-~i~vdS~~el~~i~~~----~~~~~v~lRv 168 (419)
.|++|+|..|+..++++|+++++ |+++| .|++++|+.|++ .|+. .++|||++|++++.+. ++..+|+|||
T Consensus 128 ~GlDvaS~gEL~~al~aG~~~e~iIv~nG-~K~~eeI~~Al~~~~~G~~v~IvVDS~~EL~~I~~~A~~~g~~~~V~LRI 206 (648)
T 3n2o_A 128 LGLEAGSKPELLAVLAMAQHASSVIVCNG-YKDREYIRLALIGEKLGHKVFIVLEKMSELDLVLREAKSLGVTPRLGIRI 206 (648)
T ss_dssp CEEEECSHHHHHHHHHHTSSSCCEEEECS-CCCHHHHHHHHHHHHTTCEEEEEECSTHHHHHHHHHHHHHTCCCEEEEEB
T ss_pred ceEEecCHHHHHHHHHcCCCCCcEEEecC-CCCHHHHHHHHHhhcCCCCEEEEECCHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 89999999999999999999865 55555 799999999984 6765 3799999999999875 4578999999
Q ss_pred ecCCCC-CCCCCC---CCCCCCCHHHHHHHHHHHHhc-CCe-EEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q 045356 169 KSPVDG-GARYPL---DSKFGANPEEVAHLLGAAQAS-GLA-VIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMT 242 (419)
Q Consensus 169 ~~~~~~-g~~~~~---~sRfGi~~ee~~~~l~~~~~~-~l~-l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 242 (419)
+++.+. +.+..+ .+|||++++++.++++.+++. .+. +.|||||+||++.+.+.+.++++++.++++.+++.| .
T Consensus 207 np~~~~~~~~i~TGg~~SKFGi~~~e~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~al~~~~~l~~~L~~~G-~ 285 (648)
T 3n2o_A 207 RLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKENQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLG-A 285 (648)
T ss_dssp CCSTTSTTTTCSSSSCCCCCCBCHHHHHHHHHHHHHTTCGGGEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred ECCCCCCCCccccCCCCCcCcCCHHHHHHHHHHHHhCCCCCceEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 987543 233333 389999999999999988775 565 999999999999999999999999999999999999 8
Q ss_pred cceEEEeCCCCCCC-------------CCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEE
Q 045356 243 KMRVLDIGGGFACN-------------PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRV 309 (419)
Q Consensus 243 ~~~~ldiGGG~~~~-------------~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~ 309 (419)
++++||+|||||++ ++++++++.|...+++++.+. +.+.++|++||||+++++||+|+++|+++|.
T Consensus 286 ~l~~LDiGGGfgI~Y~~~~~~~~~s~~~~leeya~~I~~~l~~~~~~~-~~~~p~Ii~EPGR~iVa~aGvLvt~Vi~vK~ 364 (648)
T 3n2o_A 286 NITYFDVGGGLAIDYDGTRSQSSNSMNYGLVEYARNIVNTVGDVCKDY-KQPMPVIISESGRSLTAHHAVLISNVIGTET 364 (648)
T ss_dssp CCCEEECCSCBCCCTTSCCCSSTTSCSCCHHHHHHHHHHHHHHHHHHH-TCCCCEEEECCHHHHHGGGEEEEEEEEEEEC
T ss_pred CCcEEEeCCCcCCCcCCccccccccCCCCHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCHHHHHhhheEEEEEEEEEe
Confidence 99999999999983 468999999999998887543 3456899999999999999999999999987
Q ss_pred eCCce-E----------------E-EE----ecC----CC------------------CC--------------------
Q 045356 310 RDELR-E----------------Y-WI----NDG----KY------------------GS-------------------- 325 (419)
Q Consensus 310 ~~~~~-~----------------~-~i----~dg----~~------------------~~-------------------- 325 (419)
..... . | .+ +.. .| .+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~da~~~~~~~~~~f~~g~~~l~~ra~~e~l~~~~~~~~~~ 444 (648)
T 3n2o_A 365 YKPETVTEPEEDFPLLLNNMWRSWLNLHNGTDARALIEIYNDTQSDLAEVHSQFATGVLTLEHRAWAEQTSLRIYYELNR 444 (648)
T ss_dssp CCCCCCCCCCTTCCHHHHHHHHHHHTCSTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCcccccHHHHHHHHHHHHhhhccCcccHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 42100 0 0 00 000 00 00
Q ss_pred -------------------------cchhhh-HHHHhh-----cceeeecccCCCCCCceeeEEeccCCCCC----Cccc
Q 045356 326 -------------------------FGWLSS-EEVIAK-----CGAHILASASHSNNRTYRSTVFGPTCAAV----DKVF 370 (419)
Q Consensus 326 -------------------------~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~G~~C~~~----D~l~ 370 (419)
.|-..| ..|+.| |+..|+.... +.+..++.|.+-||+|. +++.
T Consensus 445 ~~~~~~~~~~~~~~~l~~~l~~~y~~n~S~fqslpD~W~i~q~fpi~Pi~rl~--e~p~~~~~l~diTCDsdG~i~~f~~ 522 (648)
T 3n2o_A 445 LMSTKNRFHRPILDELSERLADKFFVNFSLFQSLPDSWGIDQVFPVLPLSGLQ--NAADRRAVMLDITCDSDGAIDAYVD 522 (648)
T ss_dssp HSCTTSTTHHHHHHHHHHHTCEEEEESSCHHHHCHHHHHHCCCCCEEESSCGG--GTTSEEEEEEESSSCTTCBCCCEEE
T ss_pred HhhhccccCcHHHHHHHHHHhHHheeehhhhccCcchhhhcCccceeeccccC--CCcceeeEEeccccCCCCchhhccC
Confidence 000112 235556 3445554433 35678999999999997 3332
Q ss_pred -----cCCCCCCCCCC--CEEEEcCCCcccccCCCCCCCCCCCCccEEEE
Q 045356 371 -----TGHQLPELEVS--DWLVFSDMGAYTTACGTNFNGFNTAAIPTYVV 413 (419)
Q Consensus 371 -----~~~~lp~l~~G--D~lv~~~~GAY~~~~~~~fng~~~~~~~~~~~ 413 (419)
..++||+++.| -+|.|+.+|||+..++...|-|..|..+...+
T Consensus 523 ~~~~~~~l~lh~~~~~e~y~lg~fl~GAYQe~lg~~HnLfg~~~~v~v~~ 572 (648)
T 3n2o_A 523 GQGIESTLPVPAWNEDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNV 572 (648)
T ss_dssp TTEEESSEEECCCCTTSCCEEEEESCCSSHHHHCCCGGGCCCCEEEEEEE
T ss_pred CCCCccceecCcCCCCCccEEEEEecchhhHHhccccccCCCCCEEEEEE
Confidence 13456677665 48999999999999999999999988766554
No 21
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.6e-39 Score=321.05 Aligned_cols=318 Identities=13% Similarity=0.100 Sum_probs=236.1
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
....|+++||+++|++|++++++.+++++++|++|| |.+++|++.+.+.|+ +|+|+|.+|+..++++|+++ +|+
T Consensus 8 ~~~~~~~~idl~~i~~N~~~l~~~~~~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~vas~~Ea~~~~~~G~~~-~Il 86 (384)
T 1xfc_A 8 PGLLAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITA-PVL 86 (384)
T ss_dssp ---CEEEEEEHHHHHHHHHHHHHHHTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESCHHHHHHHHHTTCCS-CEE
T ss_pred CCCCeEEEEeHHHHHHHHHHHHHhCCCCEEEEEEeeCCcCCChHHHHHHHHHCCCCEEEEeEHHHHHHHHhcCCCC-CEE
Confidence 456799999999999999999998888999999999 889999999999998 99999999999999999975 688
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCH---HHHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGANP---EEVAHLL 195 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~---ee~~~~l 195 (419)
+.|+ +++++++.+++.++. ++|||+++++.|++. .+..+|+|+|+++ .+|||+++ +++.+++
T Consensus 87 ~~g~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~~a~~~~~~~~V~l~vdtG---------~~R~G~~~~~~~~~~~~~ 155 (384)
T 1xfc_A 87 AWLH-PPGIDFGPALLADVQ-VAVSSLRQLDELLHAVRRTGRTATVTVKVDTG---------LNRNGVGPAQFPAMLTAL 155 (384)
T ss_dssp ECCC-CTTCCCHHHHHTTCE-EEECSHHHHHHHHHHHHHHCCCEEEEEEBCSS---------CCSSSBCTTTHHHHHHHH
T ss_pred EEcC-CCHHHHHHHHHcCcE-EEECCHHHHHHHHHHHHhcCCceEEEEEEECC---------CCccCCCcCcHHHHHHHH
Confidence 8888 778899999999985 799999999999864 3556788888875 38999998 8999999
Q ss_pred HHHHh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhh
Q 045356 196 GAAQA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTY 273 (419)
Q Consensus 196 ~~~~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~ 273 (419)
+.+++ +++++.|||+|++++.. +...+.++++++.++.+.+++.| .+++++|+||+.+..+..+..+++++.++..|
T Consensus 156 ~~i~~~~~l~l~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~l~~g~s~~~~~~~~~~~~~vR~G~~ly 234 (384)
T 1xfc_A 156 RQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQG-VRFEVAHLSNSSATMARPDLTFDLVRPGIAVY 234 (384)
T ss_dssp HHHHHTTSEEEEEEECCC-----CCSHHHHHHHHHHHHHHHHHHHTT-CCCSEEECBCHHHHHHCGGGCCSEECCSGGGG
T ss_pred HHHHhCCCCcEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEecCHHHhcCccccCCEEccCHHhH
Confidence 88876 69999999999999863 43456788999999988888888 78899999999875211111223344444444
Q ss_pred CCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccC
Q 045356 274 FPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASAS 347 (419)
Q Consensus 274 ~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (419)
... + ...+ +| +.+++++.++++|+.+|+... +..|.....+..+..+.+|.+.. ++.+.+..
T Consensus 235 g~~-~---~~~~-~e---~~~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~----~r~l~~~~ 302 (384)
T 1xfc_A 235 GLS-P---VPAL-GD---MGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGV----FRSLGGRL 302 (384)
T ss_dssp TCC-S---SGGG-CC---TTCCCCEEEEEECCEEEEECTTCEESGGGCEECSSCEEEEEECCCGGGTC----CGGGTTTC
T ss_pred CCC-c---cccc-cc---CCCceEEEEEEEEEEEEEcCCCCEEEeCCEEECCCCCEEEEEeeccccCc----ccccCCCC
Confidence 321 1 0111 23 468999999999999998532 12333322222222333332322 22222211
Q ss_pred CCCCCceeeEEeccCCCCCCccccCCC-CC-CCCCCCEEEEcCCCcc
Q 045356 348 HSNNRTYRSTVFGPTCAAVDKVFTGHQ-LP-ELEVSDWLVFSDMGAY 392 (419)
Q Consensus 348 ~~~~~~~~~~i~G~~C~~~D~l~~~~~-lp-~l~~GD~lv~~~~GAY 392 (419)
.....+++++|+|++|| |+++.+++ +| ++++||+|+|.++|+|
T Consensus 303 ~v~~~g~~~~ivG~vcm--D~~~~d~~~~p~~~~~GD~v~l~g~~~~ 347 (384)
T 1xfc_A 303 EVLINGRRCPGVGRICM--DQFMVDLGPGPLDVAEGDEAILFGPGIR 347 (384)
T ss_dssp EEEETTEEEEEESCCCS--SCEEEEEESSSCCCCTTCEEEEECSSTT
T ss_pred eEEECCEEeeEeeEecc--ceEEEEccCCCCCCCCCCEEEEEeCCCC
Confidence 11123478999999998 99999996 99 9999999999999987
No 22
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=100.00 E-value=3e-39 Score=320.45 Aligned_cols=315 Identities=14% Similarity=0.100 Sum_probs=229.0
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEEc
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~~ 124 (419)
.+|+++||+++|++|++++++.+++++++|++|| |+++.+++.+.+.|+ +|+|+|.+|++.++++|+++ +|++.
T Consensus 2 ~~~~~~idl~~l~~N~~~~~~~~~~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~vas~~E~~~~~~~G~~~-~il~~ 80 (361)
T 2dy3_A 2 NLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQ-EVLCW 80 (361)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHHTTSEEEEECHHHHHHTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCS-EEEEC
T ss_pred CceEEEEeHHHHHHHHHHHHHhCCCcEEEEEEEecCcCCCHHHHHHHHHHCCCCEEEEeEHHHHHHHHhcCCCC-CEEEE
Confidence 4689999999999999999999888899999999 688999999999997 99999999999999999975 57777
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCC-CCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cC
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHP-KCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-SG 202 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~-~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~~ 202 (419)
++ +++++++.++++++. ++|||++++++|++.++ ..+++|+|+++ .+|||++++++.++++.+++ ++
T Consensus 81 ~~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~~a~~~~~v~l~vdtG---------~~R~G~~~~~~~~~~~~~~~~~~ 149 (361)
T 2dy3_A 81 IW-TPEQDFRAAIDRNID-LAVISPAHAKALIETDAEHIRVSIKIDSG---------LHRSGVDEQEWEGVFSALAAAPH 149 (361)
T ss_dssp CC-CTTSCHHHHHTTTCE-EEECSHHHHHHHHTSCCSCEEEEEEBCCS---------SCSSSBCHHHHHHHHHHHHTCTT
T ss_pred CC-CCHHHHHHHHHcCCE-EEECCHHHHHHHHHhCccCCEEEEEEeCC---------CCCCCCCHHHHHHHHHHHHhCCC
Confidence 77 677899999999984 79999999999998765 35666666653 38999999999999998876 58
Q ss_pred CeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCCccCCC
Q 045356 203 LAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAG 281 (419)
Q Consensus 203 l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 281 (419)
+++.|+|+|++++.. +...+.++++++.++.+.+++.| .+++++|+||+.+.....+..+++++.++..|... +.
T Consensus 150 l~~~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~g~s~~~~~~~~~~~~~vR~G~~l~g~~-~~-- 225 (361)
T 2dy3_A 150 IEVTGMFTHLACADEPENPETDRQIIAFRRALALARKHG-LECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLE-PV-- 225 (361)
T ss_dssp EEEEEEECCCC--------CHHHHHHHHHHHHHHHHHTT-CCCCSCBCCCHHHHHHCGGGCTTEECCCGGGGTCC-SS--
T ss_pred CCEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcC-CCCCeEEEeCCHHHhcCcccCCCEEecchHhhCCC-cc--
Confidence 999999999999764 22336788899999988888888 78889999998764111122223444444454322 11
Q ss_pred ccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCCCCcee
Q 045356 282 HLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYR 355 (419)
Q Consensus 282 ~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
.. +||| +++++.++|+|+.+|+... +..|.....+.....+.+|.+.. ++.+.+.......+++
T Consensus 226 -~~--~e~~---~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~----~r~l~~~~~v~i~g~~ 295 (361)
T 2dy3_A 226 -AG--LEHG---LKPAMTWEAKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGM----PRHAQGKFSVTIDGLD 295 (361)
T ss_dssp -TT--CCCS---CCCCEEEEEECCEEEECC---------------CCEEEEESCCTTTTC----CGGGTTTCEEEETTEE
T ss_pred -cc--cCCC---ceeEEEEEEEEEEEEEcCCCCEEeeCCEEECCCCCEEEEEeeccccCc----CcccCCCceEEECCEE
Confidence 11 2676 8999999999999997421 12222222221222222332221 1112111110113578
Q ss_pred eEEeccCCCCCCccccCCC-CC-CCCCCCEEEEcCCCcc
Q 045356 356 STVFGPTCAAVDKVFTGHQ-LP-ELEVSDWLVFSDMGAY 392 (419)
Q Consensus 356 ~~i~G~~C~~~D~l~~~~~-lp-~l~~GD~lv~~~~GAY 392 (419)
++|+|++|| |+++.+++ +| ++++||+|+|.+.+..
T Consensus 296 ~~ivG~vcm--D~~~~d~~~~~~~~~~GD~v~~~g~~~~ 332 (361)
T 2dy3_A 296 YPQVGRVCM--DQFVISLGDNPHGVEAGAKAVIFGENGH 332 (361)
T ss_dssp EEEESCCCS--SCEEEEEETCTTCCCTTCEEEEESTTSC
T ss_pred eeEeeEEec--ccEEEEccCCCCCCCCCCEEEEEcCCCC
Confidence 999999996 99999997 89 9999999999987643
No 23
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=100.00 E-value=2.1e-38 Score=317.46 Aligned_cols=320 Identities=13% Similarity=0.076 Sum_probs=240.3
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhC-CCCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNL-PMVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~-~~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
..+|+++||+++|++|++.+++.+ ++++++|++|| +.+++|++.+.+.|+ +|+|+|.+|+..++++|+++ +|+
T Consensus 9 ~~~~~~~idl~ai~~N~~~l~~~~~~~~~l~~vvKanaYGhg~~~v~~~l~~~G~~~f~vas~~Ea~~lr~~G~~~-~il 87 (391)
T 2vd8_A 9 YRDTWVEVDLDAIYNNVTHIXEFIPSDVEIFAVVKGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAGITA-PIL 87 (391)
T ss_dssp CSSCEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCS-CEE
T ss_pred CCCeEEEEcHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCChHHHHHHHHHcCCCeEEeecHHHHHHHHhcCCCC-ceE
Confidence 568999999999999999999998 58899999999 568999999999998 89999999999999999975 476
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH---CCCCeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW---HPKCELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLLGAA 198 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~---~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l~~~ 198 (419)
+.|+ +++++++.++++++. ++|||+++++.+++. .+..+|+|+|+++ .+|||+++ +++.++++.+
T Consensus 88 ~~g~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~a~~~~~~~~V~lkvdtG---------m~R~G~~~~~e~~~~~~~i 156 (391)
T 2vd8_A 88 VLGP-SPPRDINVAAENDVA-LTVFQXEWVDEAIXLWDGSSTMXYHINFDSG---------MGRIGIRERXELXGFLXSL 156 (391)
T ss_dssp ECSC-CCGGGHHHHHHTTEE-EECCCHHHHHHHHHHCCSSCCEEEEEEBCSS---------CCSSSBCCHHHHHHHHHHH
T ss_pred EecC-CChHHHHHHHHCCeE-EEEcCHHHHHHHHHHHhcCCceEEEEEEeCC---------CCCCCCCchhhHHHHHHHH
Confidence 7775 788999999999884 699999999999872 2345677777764 38999985 8899998888
Q ss_pred Hh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 045356 199 QA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPN 276 (419)
Q Consensus 199 ~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~ 276 (419)
++ +++++.|+|+|+++++. +...+.+++++|.++.+.+++.| ..+.++|+|++.+.....+..+++++.++..|...
T Consensus 157 ~~~~~l~l~Gl~tH~~~~d~~~~~~~~~q~~~f~~~~~~l~~~g-~~~~~~~~gnS~g~~~~~~~~~~~vR~G~~lyg~~ 235 (391)
T 2vd8_A 157 EGAPFLELEGVYTHFATADEVETSYFDXQYNTFLEQLSWLXEFG-VDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLS 235 (391)
T ss_dssp TTCTTEEEEEEECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTT-CCCCSEECCCHHHHTTCTTCCTTEEEESTTTTTCC
T ss_pred hhcCCceEEEeeeccccccCCCcHHHHHHHHHHHHHHHHHHhcc-CCcceEEecchhHhhcCcccCCCEEehhHHhcCCC
Confidence 76 58999999999999864 33446778999999888888888 68888999998765321122234455555555322
Q ss_pred ccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCC
Q 045356 277 ETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSN 350 (419)
Q Consensus 277 ~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (419)
+ .. . ..||||+.+++++.++|+|+.+|+... +.+|.....+..+..+.+|.+.. ++.+... ...
T Consensus 236 -p-~~--~-~~~~g~~~l~pa~~l~~~V~~vk~~~~G~~v~yg~~~~~~~~~~~a~v~~GyaDg~----~r~l~~~-~v~ 305 (391)
T 2vd8_A 236 -P-SV--E-IRPFLPFXLEPALSLHTXVAHIKQVIXGDGISYNVTYRTXTEEWIATVAIGYADGW----LRRLQGF-EVL 305 (391)
T ss_dssp -S-CT--T-TGGGCSSCCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTC----CGGGTTC-EEE
T ss_pred -C-cc--c-cccccccccceeEEEEEEeeEEEEcCCCCeEeeCCEEEcCCCcEEEEEeeeeeccc----ccccCCC-eEE
Confidence 1 11 1 247889999999999999999997532 23344333333333344443322 2222111 111
Q ss_pred CCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCC-cccc
Q 045356 351 NRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMG-AYTT 394 (419)
Q Consensus 351 ~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~G-AY~~ 394 (419)
..+++++|+|++|| |+++.++ +|++++||+|+|.+.+ +|+.
T Consensus 306 v~g~~~~ivG~vcm--D~~~vd~-~~~~~~GD~v~l~g~~~~~~~ 347 (391)
T 2vd8_A 306 VNGXRVPIVGRVTM--DQFMIHL-PCEVPLGTXVTLIGRQGDEYI 347 (391)
T ss_dssp ETTEEEEEESCCCS--SCEEEEE-SSCCCTTCEEEEEEEETTEEE
T ss_pred ECCeecceecceec--ceeEeec-CCCCCCCCEEEEECCCCCCCC
Confidence 23578999999997 9999999 7899999999999754 5544
No 24
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=100.00 E-value=4e-38 Score=315.02 Aligned_cols=319 Identities=15% Similarity=0.104 Sum_probs=237.6
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~ 123 (419)
..+|+++||+++|++|++++++.+++++++|++|| +.+++|++.+.+.|+ +|+|+|.+|+..++++|+++ +|++
T Consensus 5 ~~~p~~~idl~~i~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~f~vas~~Ea~~~~~~G~~~-~il~ 83 (386)
T 1vfs_A 5 PTRVYAEIDLDAVRANVRALRARAPRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQG-RIMC 83 (386)
T ss_dssp CSSEEEEEEHHHHHHHHHHHHTTSTTSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCS-EEEE
T ss_pred CCCeEEEEeHHHHHHHHHHHHHhCCCcEEEEEEEecccCCCHHHHHHHHHHCCCCEEEEeeHHHHHHHHhcCCCC-CEEE
Confidence 57899999999999999999998888999999999 678999999999998 89999999999999999975 5777
Q ss_pred cCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHH---HH
Q 045356 124 ANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHL---LG 196 (419)
Q Consensus 124 ~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~---l~ 196 (419)
.|+. ++++++.+++.++. ++|||+++++.|++. .+..+|+|+|+++ .+|||++++++.++ ++
T Consensus 84 ~~~~-~~~~~~~~~~~~i~-~~vds~~~l~~l~~~a~~~~~~~~V~l~vdtG---------~~R~G~~~~e~~~~~~~~~ 152 (386)
T 1vfs_A 84 WLWT-PGGPWREAIETDID-VSVSGMWALDEVRAAARAAGRTARIQLKADTG---------LGRNGCQPADWAELVGAAV 152 (386)
T ss_dssp CCCC-TTCCHHHHHHTTCE-EEECSHHHHHHHHHHHHHHTSCEEEEEEBCSS---------CCSSSBCHHHHHHHHHHHH
T ss_pred ECCC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHHHHhcCCceEEEEEEcCC---------CCCCCCCHhHHHHHHHHHH
Confidence 7764 56899999999985 699999999999865 4556788888874 38999999887555 77
Q ss_pred HHHh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhC
Q 045356 197 AAQA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYF 274 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~ 274 (419)
.+++ +++++.|||+|+++++. +......+++.+.++.+.+++.| .++.++++|++.+.....+..+++++.++..|.
T Consensus 153 ~i~~~~~l~l~Gl~tH~~~~~~~~~~~~~~~~~~f~~~~~~l~~~g-~~~~~~~~g~s~g~~~~~~~~~~~vR~G~~lyg 231 (386)
T 1vfs_A 153 AAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEG-VDPEVRHIANSPATLTLPETHFDLVRTGLAVYG 231 (386)
T ss_dssp HHHHTTSEEEEEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTT-CCCSEEEEECHHHHHHCGGGCSSEEEECGGGGT
T ss_pred HHHhCCCceEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHHHHhcC-CCCCeEEecCCHHHHcCccccCCEEEeChhhhC
Confidence 7766 69999999999999864 22345788899999888888888 788899999987652111212233444444443
Q ss_pred CCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCC
Q 045356 275 PNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASH 348 (419)
Q Consensus 275 ~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
... ...+..| +|+.+++++.++|+|+.+|.... +..|.....+..+..+.+|.+.. ++.+.+...
T Consensus 232 ~~p----~~~~~~~-~~~~l~pa~~l~a~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~----~r~l~~~~~ 302 (386)
T 1vfs_A 232 VSP----SPELGTP-AQLGLRPAMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGI----PRNASGRGP 302 (386)
T ss_dssp CCS----CGGGCCT-TTTTCCCCEEEEEECCEEEEECTTCEESGGGCEECSSSEEEEEECCCTTTTC----CGGGTTTCE
T ss_pred CCc----ccccccc-cccCCceEEEEEEEEEEEEEcCCCCeEeeCCEEECCCCCEEEEEecccccCc----ccccCCCCE
Confidence 221 0111122 47889999999999999997522 23333332222223333332222 222222111
Q ss_pred CCCCceeeEEeccCCCCCCccccCCCCCCCC-CCCEEEEcCCCcc
Q 045356 349 SNNRTYRSTVFGPTCAAVDKVFTGHQLPELE-VSDWLVFSDMGAY 392 (419)
Q Consensus 349 ~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~-~GD~lv~~~~GAY 392 (419)
....+++++|+|++|| |+++.++++ +++ +||+|+|.++|+|
T Consensus 303 v~i~g~~~~ivG~vcm--D~~~~dv~~-~~~~~GD~v~l~g~~~~ 344 (386)
T 1vfs_A 303 VLVAGKIRRAAGRIAM--DQFVVDLGE-DLAEAGDEAVILGDAER 344 (386)
T ss_dssp EEETTEEEEBCSCCCS--SCEEEEEET-CCCCTTCEEEEECCGGG
T ss_pred EEECCEEeeEeeEeec--CcEEEEccC-CCCCCCCEEEEEeCCCC
Confidence 1123478999999997 999999988 899 9999999999988
No 25
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=100.00 E-value=8.5e-38 Score=312.62 Aligned_cols=316 Identities=13% Similarity=0.109 Sum_probs=232.4
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCC-ceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEE
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMV-HPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~-~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~ 123 (419)
.+|+++||+++|++|++.+++.++++ +++|++|| |..++|++.+.+.|+ +|+|+|.+|+..++++|+++ +|++
T Consensus 6 ~~~~~~idl~ai~~N~~~l~~~~~~~~~l~~vvKAnaYG~g~~~v~~~l~~~G~~~f~vas~~Ea~~lr~aG~~~-~Il~ 84 (388)
T 1bd0_A 6 RDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEA-PILV 84 (388)
T ss_dssp SSEEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCS-CEEE
T ss_pred CceEEEEcHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCCHHHHHHHHHHCCCCEEEEeeHHHHHHHHhCCcCC-CEEE
Confidence 46899999999999999999999888 99999999 778999999999998 99999999999999999975 5888
Q ss_pred cCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHC---CCCeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHHHHHH
Q 045356 124 ANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWH---PKCELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLLGAAQ 199 (419)
Q Consensus 124 ~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~---~~~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l~~~~ 199 (419)
.|+ +++++++.++++++. ++|||+++++.+++.+ +..+|+|+|+++ .+|||+++ +++.++++.++
T Consensus 85 ~g~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~~a~~~~~~~V~lkvdtG---------m~R~G~~~~~e~~~~~~~i~ 153 (388)
T 1bd0_A 85 LGA-SRPADAALAAQQRIA-LTVFRSDWLEEASALYSGPFPIHFHLKMDTG---------MGRLGVKDEEETKRIVALIE 153 (388)
T ss_dssp CSC-CCGGGHHHHHHTTEE-EEECCHHHHHHHHHHCCCSSCEEEEEEBCSS---------SCSSSBCSHHHHHHHHHHHH
T ss_pred ECC-CCHHHHHHHHHcCCE-EEECCHHHHHHHHHHhccCCCeEEEEEEcCC---------CCcCCCCCHHHHHHHHHHHH
Confidence 887 788999999999875 7999999999999865 335677777764 38999985 88999998887
Q ss_pred h-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHc-CCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 045356 200 A-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARL-GMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPN 276 (419)
Q Consensus 200 ~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~ 276 (419)
+ +++++.|||+|+++++. +.....++++.|.+ +++. | .++.++|+||+.+.....+..+++++.++..|...
T Consensus 154 ~~~~l~l~Gl~tH~~~~~~~~~~~~~~q~~~f~~----l~~~~g-~~~~~~~~g~S~~~~~~~~~~~~~vR~G~~lyG~~ 228 (388)
T 1bd0_A 154 RHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLH----MLEWLP-SRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLA 228 (388)
T ss_dssp HSTTEEEEEEECCCSSTTSSCCHHHHHHHHHHHH----HHTTCS-SCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCC
T ss_pred hCCCceEEEEEEccCCCCCCCcHHHHHHHHHHHH----HHhhcC-CCCCeEEecCCHHHhcCcccCCCEEehhHHHHCCC
Confidence 6 69999999999999864 22234455555444 5554 7 67889999998765111111223444444444321
Q ss_pred ccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCC
Q 045356 277 ETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSN 350 (419)
Q Consensus 277 ~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (419)
+..++.+|| ++.+++++.++++|+.+|+... +.+|.....+..+..+.+|.+.. ++.+.+. ...
T Consensus 229 ----p~~~~~~~~-~~~l~pa~~l~~~V~~vk~~~~G~~v~Yg~~~~~~~~~~~a~v~~GyaDg~----~r~l~~~-~v~ 298 (388)
T 1bd0_A 229 ----PSPGIKPLL-PYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGW----LRRLQHF-HVL 298 (388)
T ss_dssp ----SCGGGGGGC-SSCCCCCEEEEEECSEEEEECTTCEESGGGCEECCSSEEEEEESCCGGGTC----CGGGGGC-EEE
T ss_pred ----ccccccccc-ccCcceEEEEEEEEEEEEEcCCCCeEecCCeEECCCCcEEEEEeeeeccCc----cccccCC-cEe
Confidence 111222245 6789999999999999997532 23444433333333444443322 2222211 111
Q ss_pred CCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCCC-ccccc
Q 045356 351 NRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDMG-AYTTA 395 (419)
Q Consensus 351 ~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~G-AY~~~ 395 (419)
..+++++|+|++|| |+++.+++ |++++||+|+|.+.+ +|+.+
T Consensus 299 v~g~~~~ivG~vcm--D~~~vdv~-~~~~~GD~v~l~g~~~~~~~~ 341 (388)
T 1bd0_A 299 VDGQKAPIVGRICM--DQCMIRLP-GPLPVGTKVTLIGRQGDEVIS 341 (388)
T ss_dssp ETTEEEEEESCCCS--SCEEEECS-SCCCTTCEEEEEEEETTEEEC
T ss_pred ECCEEeeEEeeccc--ceEEEECC-CCCCCCCEEEEecCCCCCCCC
Confidence 23578999999997 99999998 899999999999754 55543
No 26
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, PLP, TIM barrel, structural genomics, NEW YORK SGX center for structural genomics; HET: PLP; 1.70A {Oenococcus oeni}
Probab=100.00 E-value=4.8e-35 Score=292.03 Aligned_cols=317 Identities=12% Similarity=0.021 Sum_probs=220.2
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
...+|+++||+++|++|++.+++.+++++++|++|| +.+++|++.+.+.|+ +|+|+|.+|+..++++|+++ +|+
T Consensus 6 ~~~~~~~~idl~~l~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~~~vas~~Ea~~l~~aG~~~-~il 84 (380)
T 3co8_A 6 IHRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAGIDD-FIL 84 (380)
T ss_dssp TTSSCEEEECHHHHHHHHHHHHHHHCCSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEESSHHHHHHHHHTTCCC-CEE
T ss_pred ccCCeEEEEcHHHHHHHHHHHHHhCCCcEEEEEEEecccCCCHHHHHHHHHHcCCCEEEEeeHHHHHHHHhcCCCC-CEE
Confidence 456899999999999999999998888999999999 568999999999998 89999999999999999975 466
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCC--CCeEEEEEecCCCCCCCCCCCCCCCCC-HHHHHHHHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHP--KCELLIRIKSPVDGGARYPLDSKFGAN-PEEVAHLLGAAQ 199 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~--~~~v~lRv~~~~~~g~~~~~~sRfGi~-~ee~~~~l~~~~ 199 (419)
+.|+ +++++++.++++++. ++|||+++++.|++.++ ..+|+|+|+++ .+|||++ ++++.++++.++
T Consensus 85 ~~g~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~~a~~~~~~V~l~vdtG---------~~R~G~~~~ee~~~~~~~i~ 153 (380)
T 3co8_A 85 ILGP-IDVKYAPIASKYHFL-TTVSSLDWLKSADKILGKEKLSVNLAVDTG---------MNRIGVRSKKDLKDEIEFLQ 153 (380)
T ss_dssp ECSC-CCGGGHHHHHHTTCE-EEECCHHHHHHHHHHCTTCCEEEEEEBCSS---------SCSSSBCSHHHHHHHHHHHH
T ss_pred EECC-CCHHHHHHHHHCCCE-EEECCHHHHHHHHHhcccCCceEEEEEcCC---------CCCCCCCCHHHHHHHHHHHH
Confidence 6676 788999999999985 69999999999998765 34555665553 3999998 999999998887
Q ss_pred h--cCCeEEEEEEeeCCCCCCHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHH---HHHHHHHHHHhh
Q 045356 200 A--SGLAVIGVAFHIGSEATNLDA-FHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHE---AASIIKDAIQTY 273 (419)
Q Consensus 200 ~--~~l~l~Glh~H~gs~~~~~~~-~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~---~~~~i~~~l~~~ 273 (419)
+ +++++.|||+|++++....+. +.++++.|.++.+. . ..+.++++|++.+.....+. ..++++.+...|
T Consensus 154 ~~~~~l~l~Gl~tH~~~~~~~~~~~~~~q~~~f~~~~~~----~-~~~~~~~~~nS~g~~~~~~~~~~~~~~vR~G~~ly 228 (380)
T 3co8_A 154 EHSDHFSYDGIFTHFASSDNPDDHYFQRQKNRWYELIDG----L-IMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVY 228 (380)
T ss_dssp HCTTTEEEEEEECCCC---------CHHHHHHHHHHHTT----S-CCCSEEECBCHHHHHHCGGGCTTSCSEEEESTTTT
T ss_pred hhCCCceEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHhc----c-CCCCcEEEeCCHHHhcCcccccCCCceEcccHhhh
Confidence 6 589999999999997542222 35566666654432 2 23456776665433100011 122233222222
Q ss_pred CCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccC
Q 045356 274 FPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASAS 347 (419)
Q Consensus 274 ~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (419)
... + ...+ .|| ++.+++++.++|+|+.+|.... +..|.....+.....+.+|.+.. ++.+ ...
T Consensus 229 G~~-p---~~~~-~~~-~~~l~pa~~l~a~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~----~r~l-~~~ 297 (380)
T 3co8_A 229 GVE-P---SEGV-LGP-IDKLKPVFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGW----LAEY-QDF 297 (380)
T ss_dssp TCC-T---TTTS-SSC-GGGSCCCEEEEEECSEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTC----CGGG-TTC
T ss_pred CcC-C---Cccc-ccc-ccCcceeEEEEEEEEEEEEcCCCCeEeeCCEEECCCCCEEEEEecCccccc----cccc-CCC
Confidence 111 1 0111 245 7789999999999999998421 22333322222233334443322 2222 211
Q ss_pred CCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCC-Cccccc
Q 045356 348 HSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM-GAYTTA 395 (419)
Q Consensus 348 ~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~-GAY~~~ 395 (419)
.....+++++|+|+.|| |+++.+++. ++++||.|+|.+. |+|..+
T Consensus 298 ~v~i~g~~~~ivG~vcm--D~~~vdv~~-~~~~GD~v~l~g~~~~~~~~ 343 (380)
T 3co8_A 298 QLLIDGQKCRQVGQIAM--DQMMVALPH-EYPIGTEVTLIGKSGKYENT 343 (380)
T ss_dssp EEEETTEEEEEESCCCS--SCEEEEESS-CCCTTCEEEEEEEETTEEEC
T ss_pred eEEECCEEeEEeccccc--ceEEEECCC-CCCCCCEEEEEeCCCCCCCC
Confidence 11123578999999998 999999988 8999999999985 877765
No 27
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=100.00 E-value=8.3e-32 Score=267.33 Aligned_cols=314 Identities=13% Similarity=0.099 Sum_probs=237.4
Q ss_pred CcEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccC----CcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEEc
Q 045356 51 EPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKCN----PEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 51 tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKan----~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~~ 124 (419)
..+.+||+++|++|++.+++.++ ++++++++||| ..++|++.+.+.|+ +|+|++++|+..++++|++. +|++.
T Consensus 6 ~~~l~Idl~al~~N~~~l~~~~~~~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~va~~~Ea~~lr~~G~~~-~ilvl 84 (374)
T 4ecl_A 6 RAYLEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFAVATIDEGIRLRKYGISS-EILIL 84 (374)
T ss_dssp SEEEEECHHHHHHHHHHHHHTSCTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCS-EEEEC
T ss_pred cEEEEEcHHHHHHHHHHHHHhcCCCCEEEEEEccCccCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHhcCCCC-CEEEE
Confidence 34788999999999999999875 79999999996 68999999999999 99999999999999999964 56666
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cCC
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-SGL 203 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~~l 203 (419)
|+. ++++++.++++++. ++|||+++++.+++..+..+++|+|+++ .+|+|+. +++.++++.+++ +++
T Consensus 85 g~~-~~~~~~~~~~~~i~-~~v~s~~~l~~l~~~~~~~~v~lkvdtG---------m~R~G~~-~e~~~~~~~i~~~~~l 152 (374)
T 4ecl_A 85 GYT-SPSRAKELCKYELT-QTLIDYRYSLLLNKQGYDIKAHIKIDTG---------MHRLGFS-TEDKDKILAAFSLKHI 152 (374)
T ss_dssp SCC-CGGGHHHHHHTTCE-EEECCHHHHHHHHTTCCCEEEEEEEESS---------SCSSSEE-SSCHHHHHHHTTCTTE
T ss_pred eCC-CHHHHHHHHHCCCE-EEECCHHHHHHHHhcCCCccEEEEEcCC---------CCcCccC-HHHHHHHHHHHhCCCc
Confidence 764 67899999999885 6999999999999886677899999875 3899999 888888887765 589
Q ss_pred eEEEEEEeeCCCCC----CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCCccC
Q 045356 204 AVIGVAFHIGSEAT----NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETA 279 (419)
Q Consensus 204 ~l~Glh~H~gs~~~----~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~~~~ 279 (419)
++.|+|+|+++++. +.....+|+++|.++.+.+++.| .++.++++|+..+.....+...+++|.++..|....
T Consensus 153 ~l~Gl~tH~~~ad~~~~~~~~~~~~q~~~f~~~~~~l~~~g-~~~~~~~~~nSa~~~~~~~~~~d~vR~Gi~lyG~~p-- 229 (374)
T 4ecl_A 153 KVAGIFTHLCAADSLEENDVAFTNKQIGSFYKVLDWLKSSG-LNIPKVHIQSSYGLLNYPELECDYIRVGVALYGVLS-- 229 (374)
T ss_dssp EEEEEECCCSCTTCCSHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCEEECCCHHHHHHCTTCCCSEEEESGGGGTCCS--
T ss_pred eEEEEEEECCccCcccCcCcHHHHHHHHHHHHHHHHHHHcC-CCCCeEEecCCchhhcCcccCCCEEcccceeeCCCC--
Confidence 99999999999865 23445788999999998888888 788999988764330000111233444444443211
Q ss_pred CCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeeccc-CCCCCC
Q 045356 280 AGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASA-SHSNNR 352 (419)
Q Consensus 280 ~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 352 (419)
. ...- .+-..-..|++.|.++|+.+|.... +..|.....++.++.+++|++.. ++-+.++ ......
T Consensus 230 ~--~~~~-~~~~~~l~pa~~l~a~Vi~vk~~~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~----~R~l~~~~~~v~i~ 302 (374)
T 4ecl_A 230 S--TNDK-TKLELDLRPVLSLKAKVVLIRKIKQGESVGYSRAFTATRDSLIAILPIGYADGF----PRNLSCGNSYVLIG 302 (374)
T ss_dssp S--SCCC-CSSCCCCCCCEEEEEECCEEEEECTTCBSTTCTTCBCSSCEEEEEESCCGGGTC----CGGGTTTSCEEEET
T ss_pred c--cccc-cccccCceEEEEEEEEEEEEEEcCCCCcCCCCCeEECCCCcEEEEEeccccccc----chhccCCceEEEEC
Confidence 0 0000 0001246899999999999997422 23454444444556667776665 5555544 333346
Q ss_pred ceeeEEeccCCCCCCccccCCC-CCCCCCCCEEEEcCC
Q 045356 353 TYRSTVFGPTCAAVDKVFTGHQ-LPELEVSDWLVFSDM 389 (419)
Q Consensus 353 ~~~~~i~G~~C~~~D~l~~~~~-lp~l~~GD~lv~~~~ 389 (419)
+++++|+|+.|| |+++.|++ .|++++||.++|.+.
T Consensus 303 g~~~pivGrv~M--D~~~vDvt~~~~~~~Gd~v~l~G~ 338 (374)
T 4ecl_A 303 GRQAPIVGKICM--DQLAVDVTDIPNVKTGSIATLIGK 338 (374)
T ss_dssp TEEEEEESCCCS--SCEEEECTTCSSCCTTCEEEEEEE
T ss_pred CEEEEEEChhhh--ceEEEEcCCCCCCCCCCEEEEEeC
Confidence 789999999999 99999985 678999999999863
No 28
>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=99.98 E-value=6.7e-33 Score=274.41 Aligned_cols=308 Identities=13% Similarity=0.067 Sum_probs=214.2
Q ss_pred CcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEE-EcC
Q 045356 51 EPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRII-YAN 125 (419)
Q Consensus 51 tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii-~~g 125 (419)
.|+++||+++|++|++++++. ++++++|++|| +.+++|++.+.+.+.+|+|+|.+|+..++++|+++ +|+ +.|
T Consensus 3 ~~~~~idl~~l~~N~~~l~~~-~~~~l~~vvKanaYG~g~~~i~~~l~~~~~~~~va~~~Ea~~~~~~G~~~-~Il~~~g 80 (357)
T 1rcq_A 3 PARALIDLQALRHNYRLAREA-TGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQ-PILLLEG 80 (357)
T ss_dssp CCEEEEEHHHHHHHHHHHHHH-HCSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCS-CEEETTC
T ss_pred ceEEEEeHHHHHHHHHHHHhC-CCCeEEEEEEeccccCCHHHHHHHHHHhCCEEEEccHHHHHHHHhCCcCC-CEEEEeC
Confidence 589999999999999999998 88999999999 77899999997775599999999999999999975 577 667
Q ss_pred CCCCHHHHHHHHHCCCcEEEecCHHHHHHHHh--HCCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cC
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDSIQELDKIRK--WHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-SG 202 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~--~~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~~ 202 (419)
+ +++++++.++++++. ++|||+++++.|++ ..+..+|+|+|+++ .+|||++++++.++++.+++ ++
T Consensus 81 ~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~a~~~~~~~V~l~vdtG---------~~R~G~~~~~~~~~~~~i~~~~~ 149 (357)
T 1rcq_A 81 F-FEASELELIVAHDFW-CVVHCAWQLEAIERASLARPLNVWLKMDSG---------MHRVGFFPEDFRAAHERLRASGK 149 (357)
T ss_dssp C-SSGGGHHHHHHTTEE-EEECSHHHHHHHHHCCCSSCEEEEEEBCSS---------SCSSSBCHHHHHHHHHHHHHTTC
T ss_pred C-CCHHHHHHHHHcCCE-EEECCHHHHHHHHhhccCCCeEEEEEEcCC---------CCCCCCCHHHHHHHHHHHHhCCC
Confidence 6 788999999999874 79999999999987 12345677777764 38999999999999988876 68
Q ss_pred CeEEEEEEeeCCCCCCH-HHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCCccCCC
Q 045356 203 LAVIGVAFHIGSEATNL-DAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETAAG 281 (419)
Q Consensus 203 l~l~Glh~H~gs~~~~~-~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 281 (419)
+++.|||+|++++.... ....++++.+.++.+ ... .++...|.||++.. + +...++++.+...|... +.
T Consensus 150 l~l~Gl~th~~~~~~~~~~~~~~~~~~f~~~~~---~l~-~~~s~~ns~~~~~~-~--~~~~~~vR~G~~lyg~~-~~-- 219 (357)
T 1rcq_A 150 VAKIVMMSHFSRADELDCPRTEEQLAAFSAASQ---GLE-GEISLRNSPAVLGW-P--KVPSDWVRPGILLYGAT-PF-- 219 (357)
T ss_dssp EEEEEEECCCSSTTCTTCTHHHHHHHHHHHHHT---TCC-SCEECCCHHHHHHC-T--TSCCSEECCCGGGGTCC-SS--
T ss_pred CcEEEEEEcccCCCCCCcHHHHHHHHHHHHHHh---ccC-CCeEEEeCHHhhcC-c--ccCCCEEccCHHhhCCC-cc--
Confidence 99999999999986432 233456666555432 333 22222233333222 1 11112333333333221 10
Q ss_pred ccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCCCCcee
Q 045356 282 HLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRTYR 355 (419)
Q Consensus 282 ~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
..+ .++ ++.+++++.++|+|+.+|+... +..|.....+..++.+.+|.+.. ++.+.+.......+++
T Consensus 220 -~~~-~~~-~~~~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~dg~----~r~l~~~~~v~i~g~~ 292 (357)
T 1rcq_A 220 -ERA-HPL-ADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGY----PRHAADGTLVFIDGKP 292 (357)
T ss_dssp -SSC-CTT-GGGCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTC----CTTCCTTCEEEETTEE
T ss_pred -ccc-ccc-cCCCceEEEEEEEEEEEEEcCCCCEEccCCeEECCCCeEEEEEEeccccCc----ccccCCCCEEEECCEE
Confidence 111 234 6789999999999999998532 22333222222233334443332 2222211111113478
Q ss_pred eEEeccCCCCCCccccCCC-CCCCCCCCEEEEcCCC
Q 045356 356 STVFGPTCAAVDKVFTGHQ-LPELEVSDWLVFSDMG 390 (419)
Q Consensus 356 ~~i~G~~C~~~D~l~~~~~-lp~l~~GD~lv~~~~G 390 (419)
++++|+.|| |+++.+++ +|++++||.|+|.+.+
T Consensus 293 ~~ivG~vcm--D~~~vd~~~~~~~~~GD~v~l~~~~ 326 (357)
T 1rcq_A 293 GRLVGRVSM--DMLTVDLTDHPQAGLGSRVELWGPN 326 (357)
T ss_dssp EEBCSCCCS--SCEEEECTTCTTCCTTCEEEEESSS
T ss_pred eEEeeEEec--ceEEEECCCCCCCCCCCEEEEECCC
Confidence 999999999 99999986 8899999999999865
No 29
>2rjg_A Alanine racemase; alpha/beta barrel, cell shape, cell WALL biogenesis/degradat isomerase, peptidoglycan synthesis, pyridoxal phosphate; HET: KCX PLP; 2.40A {Escherichia coli} PDB: 2rjh_A* 3b8v_A* 3b8u_A* 3b8t_A* 3b8w_A*
Probab=99.98 E-value=1e-32 Score=274.95 Aligned_cols=310 Identities=11% Similarity=0.065 Sum_probs=219.4
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEE-Ec
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKC----NPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRII-YA 124 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKa----n~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii-~~ 124 (419)
.+|+++||+++|++|++++++.+++++++|++|| +..++|++.+.+ ..+|+|+|++|++.++++|++. +|+ +.
T Consensus 22 ~~p~~~idl~al~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~v~~~l~~-~~~~~va~~~Ea~~lr~~G~~~-~Il~~~ 99 (379)
T 2rjg_A 22 QAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD-ADAFGVARLEEALRLRAGGITK-PVLLLE 99 (379)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHSTTSEEEEECHHHHHTTCHHHHHHHCTT-CSEEEESSHHHHHHHHHTTCCS-CEEETT
T ss_pred CCeEEEEeHHHHHHHHHHHHHhCCCCEEEEEEeecccCCCHHHHHHHHHh-CCEEEEeEHHHHHHHHhCCcCC-CEEEEE
Confidence 7899999999999999999999889999999999 788999999988 6699999999999999999975 677 55
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH--CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-c
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW--HPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-S 201 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~--~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~ 201 (419)
|+ +++++++.+++.++. ++|||+++++.|++. .+..+|+|+|+++ .+|||++++++.++++.+++ +
T Consensus 100 g~-~~~~~~~~~~~~~i~-~~vds~~~l~~l~~a~~~~~~~V~l~vdtG---------m~R~G~~~~e~~~~~~~i~~~~ 168 (379)
T 2rjg_A 100 GF-FDARDLPTISAQHFH-TAVHNEEQLAALEEASLDEPVTVWMKLDTG---------MHRLGVRPEQAEAFYHRLTQCK 168 (379)
T ss_dssp CC-SCGGGHHHHHHTTEE-EEECSHHHHHHHHHCCCSSCBCEEEEBCSS---------CCSSSBCHHHHHHHHHHHTTCS
T ss_pred CC-CCHHHHHHHHHcCcE-EEECCHHHHHHHHhhCCCCCeEEEEEECCC---------CCccCCCHHHHHHHHHHHHhCC
Confidence 54 788999999999874 699999999999872 2346788888875 38999999999999988876 5
Q ss_pred C-CeEEEEEEeeCCCCCCH-HHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCCccC
Q 045356 202 G-LAVIGVAFHIGSEATNL-DAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNETA 279 (419)
Q Consensus 202 ~-l~l~Glh~H~gs~~~~~-~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~~~~ 279 (419)
+ +++.|||+|++++.... .....+++.+.++.+ ... . . +++|++.+.....+...++++.+...|... +
T Consensus 169 ~~l~l~Gl~tH~~~~d~~~~~~~~~q~~~f~~~~~---~l~-~--~-~s~gnS~~~~~~~~~~~~~vR~G~~lyG~~-p- 239 (379)
T 2rjg_A 169 NVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCE---GKP-G--Q-RSIAASGGILLWPQSHFDWVRPGIILYGVS-P- 239 (379)
T ss_dssp SBCSSCEEECCCSSTTCTTSTHHHHHHHHHHHHHT---TCC-S--C-EECCCHHHHHHCGGGCSSEECCCGGGGTCC-S-
T ss_pred CcEEEEEEEEECCccCCCCcHHHHHHHHHHHHHHh---ccC-C--C-eEEEECcchhcCcccCCCEECccHHHHCCC-c-
Confidence 8 99999999999876432 234556666555433 232 2 3 776665433100011112333333333321 1
Q ss_pred CCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCCCCc
Q 045356 280 AGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNNRT 353 (419)
Q Consensus 280 ~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
. .....++ +..+++++.++|+|+.+|+... +..|.....+..++.+++|++.. ++.+.+.......+
T Consensus 240 ~--~~~~~~~-~~~l~pa~~l~a~Vi~vk~~~~G~~v~yg~~~~~~~~~~ia~v~~GyaDG~----~r~l~~~~~v~i~g 312 (379)
T 2rjg_A 240 L--EDRSTGA-DFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGY----PRAAPSGTPVLVNG 312 (379)
T ss_dssp S--SSSCCGG-GGTCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSCEEEEEESCCTTTTC----CTTCCTTCEEEETT
T ss_pred c--ccccccc-ccCCceEEEEEEEEEEEEEcCCCCEEeeCCEEECCCCcEEEEEeeecccCc----ccccCCCcEEEECC
Confidence 0 1000122 4568999999999999998532 23343332322334444553332 33332221111235
Q ss_pred eeeEEeccCCCCCCccccCCC-CCCCCCCCEEEEcCCC
Q 045356 354 YRSTVFGPTCAAVDKVFTGHQ-LPELEVSDWLVFSDMG 390 (419)
Q Consensus 354 ~~~~i~G~~C~~~D~l~~~~~-lp~l~~GD~lv~~~~G 390 (419)
++++|+|+.|| |+++.+++ +|++++||.|+|.+.+
T Consensus 313 ~~~~ivG~vcm--D~~~vdv~~~~~~~~GD~v~l~g~~ 348 (379)
T 2rjg_A 313 REVPIVGRVAM--DMICVDLGPQAQDKAGDPVILWGEG 348 (379)
T ss_dssp EEEEBCSCCCS--SCEEEECCTTCCCCTTCEEEEEBTT
T ss_pred EEeeEeeeecc--ccEEEECCCCCCCCCCCEEEEECCC
Confidence 78999999999 99999986 8899999999999855
No 30
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=99.97 E-value=2.5e-31 Score=263.39 Aligned_cols=309 Identities=15% Similarity=0.177 Sum_probs=226.6
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCC----cHHHHHHHHHcCC-cEEEcCHHHHHHHHHCC-CCCCcE
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNP----EPAILETLAALGS-NFDCASPSEIQAVLALS-VSPDRI 121 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~----~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G-~~~~~I 121 (419)
...+|+++||+++|++|++.+++.++++++++++|||+ ..++++.+.+.|+ +|+|++++|+..++++| ++. +|
T Consensus 17 ~~~~~~~~Idl~al~~N~~~l~~~~~~~~l~aVvKAnaYGHG~~~va~~l~~~G~~~f~Va~~~Ea~~lr~ag~~~~-~i 95 (376)
T 3kw3_A 17 FPATAIATIDVRAIVANYRTLAQHVAPTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAVLPENV-MI 95 (376)
T ss_dssp CCCSEEEEECHHHHHHHHHHHHHHHTTSEECEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHHSCSSC-EE
T ss_pred cCCCeEEEEcHHHHHHHHHHHHHhCCCCEEEEEECCccccCCHHHHHHHHHHcCCCEEEEeEHHHHHHHHhcCCCCC-CE
Confidence 34678999999999999999999988799999999986 4889999999999 99999999999999998 764 67
Q ss_pred EEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 045356 122 IYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGA 197 (419)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~ 197 (419)
++.++. ++++++.++++++. ++|||+++++.+++. .+..+++|+|+++ .+|+|+.++++.++++.
T Consensus 96 lvl~~~-~~~~~~~~~~~~i~-~~V~s~~~l~~l~~~a~~~~~~~~V~lkVdtG---------m~R~G~~~~e~~~l~~~ 164 (376)
T 3kw3_A 96 ALLNGF-PHKAEEFVAQSGII-PLLNSWSTIEDWQTLCQKKNKKFPAIIQVDTN---------MSRLGLDKKELQKLIKN 164 (376)
T ss_dssp EETTCC-CTTCHHHHHHTTCE-EEECSHHHHHHHHHHHHHHTCCCEEEEEBCSS---------CCSSSBCHHHHHHHHHC
T ss_pred EEEeCC-CHHHHHHHHHCCCE-EEECCHHHHHHHHHHHHHcCCCeEEEEEECCC---------CCcccCCHHHHHHHHHH
Confidence 777765 45788999999885 699999999998764 4568899988875 38999999999988887
Q ss_pred HHh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCC
Q 045356 198 AQA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFP 275 (419)
Q Consensus 198 ~~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~ 275 (419)
+++ +++++.|+|+|+++.+. +.....+|+++|.++.+.++ + .. ++++..-+.-...+...+++|.++..|..
T Consensus 165 i~~~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~--~-~~---~h~aNSa~~l~~~~~~~d~vR~Gi~lYG~ 238 (376)
T 3kw3_A 165 PTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVLAQLP--T-CK---VSFANSGGIFLGSDFYFDLVRPGIALYGV 238 (376)
T ss_dssp CTHHHHSEEEEEECCCSSTTCTTCHHHHHHHHHHHHHHTTSC--C-CC---EECCCHHHHTTCGGGTTTEECCSGGGGTC
T ss_pred HHhCCCCcEEEEEEECCCCCCCCcHHHHHHHHHHHHHHhhcc--C-CC---EEEEeChhhhcCccccCCEEecChhhcCC
Confidence 654 58999999999998753 34455678888777655332 3 22 34332211101112234566777766654
Q ss_pred CccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCC
Q 045356 276 NETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHS 349 (419)
Q Consensus 276 ~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (419)
.. . +.. + .-..|++.|.++|+.+|.... +.+|.....++.++.+++|++.. ++-+.++...
T Consensus 239 ~p-~-~~~-----~--~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~----~R~~s~~~~v 305 (376)
T 3kw3_A 239 DP-H-GKH-----P--TPLKAVVKVEAQVLQSRFIDAGIPVGYRESFMTRRPSTLATISIGYADGW----PRILSNKGTV 305 (376)
T ss_dssp CT-T-CCS-----S--CSCCCCEEEEEEEEEEEEC----------------CCEEEEESCCGGGTC----CGGGTTTCEE
T ss_pred CC-C-ccc-----c--cCCcceEEEEEEEEEEEecCCCCeeccCCeEECCCCeEEEEEEecccccc----hhhcCCCceE
Confidence 21 0 100 1 247899999999999998522 35666655566677778887765 5555544333
Q ss_pred CCCceeeEEeccCCCCCCccccCCC-CCC-CCCCCEEEEcCC
Q 045356 350 NNRTYRSTVFGPTCAAVDKVFTGHQ-LPE-LEVSDWLVFSDM 389 (419)
Q Consensus 350 ~~~~~~~~i~G~~C~~~D~l~~~~~-lp~-l~~GD~lv~~~~ 389 (419)
...+++++|+|+.|| |+++.|++ .|+ +++||.++|.+.
T Consensus 306 ~i~G~~~pivGrv~M--D~~~vDvt~~~~~~~~Gd~v~l~G~ 345 (376)
T 3kw3_A 306 YFNGHKLPIVGHISM--DSIIVDATDLDKKPQRGDWVELIGP 345 (376)
T ss_dssp EETTEEEEBCSCCCS--SCEEEECTTCSSCCCTTCEEEEEBT
T ss_pred EECCEEEEEeCeecc--ceEEEEcCCCcccCCCCCEEEEECC
Confidence 346789999999999 99999986 775 999999999874
No 31
>3e5p_A Alanine racemase; ALR, PLP, SCP, isomerase, pyridoxal phosph; HET: PLP EPE 2PE; 2.50A {Enterococcus faecalis} PDB: 3e6e_A*
Probab=99.96 E-value=2e-31 Score=263.98 Aligned_cols=309 Identities=12% Similarity=0.132 Sum_probs=228.3
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCC-CCceeeeecc----CCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKC----NPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKa----n~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
....+++||+++|++|++.+++.++ ++++++++|| +..++|++.+.+.|+ +|+|++++|+..++++|++. +|+
T Consensus 6 ~r~~~~~Idl~al~~N~~~l~~~~~~~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~va~~~Ea~~lr~~G~~~-~Il 84 (371)
T 3e5p_A 6 HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQD-PIL 84 (371)
T ss_dssp TSSCEEEECHHHHHHHHHHHHHSSCSSSEEEEECHHHHHTTCHHHHHHHHHHTTCCCEEESSHHHHHHHHTTTCCS-CEE
T ss_pred cCCeEEEEEHHHHHHHHHHHHHhcCCCCEEEEEECcccccCCHHHHHHHHHHcCCCEEEEEeHHHHHHHHhcCCCC-CEE
Confidence 3456899999999999999999886 7999999999 467899999999999 99999999999999999975 576
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHH-HhHC----CCCeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKI-RKWH----PKCELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLLG 196 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i-~~~~----~~~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l~ 196 (419)
+.|+ .++++++.++++++. ++|||+++++.+ ++.+ +..+++|+|+++ .+|+|+.+ +++.++++
T Consensus 85 vlg~-~~~~~~~~~~~~~i~-~~V~s~~~l~~l~~~~a~~~~~~~~V~lkvdtG---------m~R~G~~~~ee~~~~~~ 153 (371)
T 3e5p_A 85 ILSV-VDLAYVPLLIQYDLS-VTVATQEWLEAALQQLTPESNTPLRVHLKVDTG---------MGRIGFLTPEETKQAVR 153 (371)
T ss_dssp EEEE-CCGGGHHHHHHHTCE-EEECCHHHHHHHHHHHCSCCSCCBCEEEEBCSS---------SCSSSBCSSHHHHHHHH
T ss_pred EEcC-CCHHHHHHHHHCCCE-EEECCHHHHHHHHHHHHHHcCCceEEEEEECCC---------CCcCCCCCHHHHHHHHH
Confidence 6676 467899999999885 699999999999 8865 346788888764 38999998 99999998
Q ss_pred HHHh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC--CCCHHHHHHHHHHHHHh
Q 045356 197 AAQA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC--NPGFHEAASIIKDAIQT 272 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~--~~~~~~~~~~i~~~l~~ 272 (419)
.+++ +++++.|+|+|+++++. +.....+|+++|.++.+.+++ .+.+++++..-+. -+ +...+++|.++..
T Consensus 154 ~i~~~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~----~~~~~h~~NSa~~~~~~--~~~~d~vR~Gi~l 227 (371)
T 3e5p_A 154 FVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEE----LPRYVHVSNSATALWHP--DVPGNMIRYGVAM 227 (371)
T ss_dssp HHHHSTTBCCCEEECCCSCTTSSCCHHHHHHHHHHHTTSSSCSC----CCSEEECBCHHHHHHCT--TSSCSEEEECGGG
T ss_pred HHHhCCCccEEEEEEEcCCCCCCCcHHHHHHHHHHHHHHHHhhh----cCCeEEEecChhHhcCc--ccCCCeEeeCcee
Confidence 8876 68999999999998753 444556788777665443221 1345665433221 01 1123456666666
Q ss_pred hCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeeccc
Q 045356 273 YFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASA 346 (419)
Q Consensus 273 ~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (419)
|.... . +.. .+-..-..|++.|.++|+.+|.... +.+|.....++.++.+++|++.. ++.+.+.
T Consensus 228 YG~~p-~-~~~----~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~----~R~ls~~ 297 (371)
T 3e5p_A 228 YGLNP-S-GNK----LAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGW----LRHLQGF 297 (371)
T ss_dssp GTCCT-T-TTS----SCCSSCCCCCEEEEEECCCEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTC----CGGGTTC
T ss_pred ECCCc-c-ccc----cccccCcceEEEEEEEEEEEEEcCCCCeECcCCeeECCCCcEEEEEeecchhch----hhhcCCC
Confidence 64321 0 000 0011347899999999999998532 35566555556667778886665 4444332
Q ss_pred CCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCC
Q 045356 347 SHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389 (419)
Q Consensus 347 ~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~ 389 (419)
. ....+++++|+|+.|| |+++.|+..| +++||.+++.+.
T Consensus 298 ~-v~i~G~~~pivGrv~M--D~~~vDv~~~-~~~Gd~v~l~G~ 336 (371)
T 3e5p_A 298 T-VLVNGKRCEIVGRVCM--DQCMIRLAEE-VPVGPVVTLVGK 336 (371)
T ss_dssp E-EESSSCEEEEESCCCS--SCEEEEESSC-CCSCCEEEEEEE
T ss_pred e-EEECCEEeEEeceecc--cEEEEECCCC-CCCCCEEEEEcC
Confidence 1 2346789999999999 9999988544 899999999853
No 32
>3anu_A D-serine dehydratase; PLP-dependent fold-type III enzyme, PL binding, zinc binding, lyase; HET: PLP; 1.90A {Gallus gallus} PDB: 3anv_A* 3awn_A* 3awo_A*
Probab=99.96 E-value=3.9e-30 Score=256.29 Aligned_cols=240 Identities=14% Similarity=0.147 Sum_probs=187.4
Q ss_pred CCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEEc
Q 045356 48 ELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 48 ~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~~ 124 (419)
+++||+++||+++|++|++.+++.++ +++++|++|||+++++++.+.+.|+ +|+|+|++|++.++++|++ +|++.
T Consensus 9 ~~~tP~~~idl~~l~~N~~~l~~~~~~~~~~l~~~vKa~~~~~i~~~l~~~G~~~~~vas~~Ea~~~~~~G~~--~ii~~ 86 (376)
T 3anu_A 9 TLPTPALTIDRTTARRNAERMRERCRALGVRLRPHVKTHKTLEGGLLATGGTRRGIAVSTLAEARFFADGGFD--DILLA 86 (376)
T ss_dssp GSCSSEEEEEHHHHHHHHHHHHHHHHHHTCEECCBCTTTCCHHHHHHHTTTCCEEEEESSHHHHHHHHHTTCE--EEEEE
T ss_pred cCCCceEEEeHHHHHHHHHHHHHHHHHcCCcEEEEEhhhcCHHHHHHHHHCCCCeEEEccHHHHHHHHHCCCC--eEEEE
Confidence 57999999999999999999999886 8999999999999999999999998 9999999999999999996 55554
Q ss_pred CCCCCHHHHHHHHH-----CCCcEEEecCHHHHHHHHhHCC----CCeEEEEEecCCCCCCCCCCCCCCCCCHHH--HHH
Q 045356 125 NACKPVSHIKYAAS-----VGVNLTTFDSIQELDKIRKWHP----KCELLIRIKSPVDGGARYPLDSKFGANPEE--VAH 193 (419)
Q Consensus 125 gp~k~~~~l~~a~~-----~gi~~i~vdS~~el~~i~~~~~----~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee--~~~ 193 (419)
.+.+ +++++.+++ .++. ++|||+++++.|++.++ ..+|+|+|+++ .+|||+++++ +.+
T Consensus 87 ~~~~-~~~l~~~~~l~~~~~~i~-~~vds~~~l~~l~~~a~~~~~~~~V~l~vd~g---------~~R~G~~~~~~~~~~ 155 (376)
T 3anu_A 87 YPVP-TARLEECAGLARRLDAFH-VLLDRPEALASLRQRPLGHGKRWLVWLKLDCG---------NGRAGVRPTDPAALE 155 (376)
T ss_dssp EECC-GGGHHHHHHHHHHSSCEE-EEECCHHHHHHHHTSCCCTTCCEEEEEEECCC-----------CSSBCTTSHHHHH
T ss_pred CCCc-HHHHHHHHHHHhcCCcEE-EEeCCHHHHHHHHHHHHhCCCceEEEEEECCC---------CCcCCCCCCchhHHH
Confidence 4446 789999988 7774 79999999999998653 45677887764 3899999876 888
Q ss_pred HHHHHHhc---CCeEEEEEEeeCC-CC-CCHH---HH-HHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC-CCCCHH-HH
Q 045356 194 LLGAAQAS---GLAVIGVAFHIGS-EA-TNLD---AF-HAAIAEAKTVFETAARLGMTKMRVLDIGGGFA-CNPGFH-EA 262 (419)
Q Consensus 194 ~l~~~~~~---~l~l~Glh~H~gs-~~-~~~~---~~-~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~-~~~~~~-~~ 262 (419)
+++.++++ ++++.|||+|.|+ .. .+.. .+ .++++.+.++.+.+++.| .++.++|+||+.+ .....+ ..
T Consensus 156 l~~~i~~~~~~~l~l~Gl~~h~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~vs~Ggs~~~~~~~~~~~~ 234 (376)
T 3anu_A 156 LAQAIANDAPEEVTLVGVYAHCGNTYGCSGADTIQAIARTTTNAVLSFVAALRQAG-VPCPQASIGSTPSCSHPIPEMSQ 234 (376)
T ss_dssp HHHHHHHSCTTTEEEEEEEECCGGGC-CCSHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCEEEECCHHHHHSCCGGGGG
T ss_pred HHHHHhCCCCCceEEEEEEeeCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEEccCHHHhhhhhhcCC
Confidence 88877657 8999999999987 32 3432 23 357888888888888888 7899999999987 522112 11
Q ss_pred HHHHHHHHHhhCCCccCCCccEEEEcCc-chhcccceEEEEEEEEEEE
Q 045356 263 ASIIKDAIQTYFPNETAAGHLSVISEPG-RFLADTAFTLATKVIGKRV 309 (419)
Q Consensus 263 ~~~i~~~l~~~~~~~~~~~~~~li~EpG-R~lv~~a~~lvt~V~~~k~ 309 (419)
.++++.+...|++. . ..++| |+++++|+.++|+|+++|.
T Consensus 235 ~~~vr~G~~l~~~~------~--~~~~~~~~~~~~a~~l~a~Vi~vk~ 274 (376)
T 3anu_A 235 LTELHPGNYIFYDL------Q--QTQLGSCQPQDVAIRVLTRVIGHYA 274 (376)
T ss_dssp SSEECCCGGGTCCH------H--HHHHTSSCGGGCCEEEEEEEEEEET
T ss_pred ceEeccceEEEecc------c--cccccCCCcCceEEEEEEEEEeeeC
Confidence 22333333333321 1 11345 5788999999999999987
No 33
>3mub_A Alanine racemase; alpha/beta barrel, extended beta-strand domain, pyridoxal PH cofactor, carba lysine, isomerase; HET: LLP KCX; 2.00A {Streptococcus pneumoniae} PDB: 3s46_A*
Probab=99.96 E-value=3.7e-30 Score=254.59 Aligned_cols=310 Identities=13% Similarity=0.099 Sum_probs=225.5
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccC----CcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKCN----PEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKan----~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
...++.+||+++|++|++.+++.++ ++++++++||| ...+|++.+.+. + +|+|++++|+..++++|++. +|+
T Consensus 6 ~r~~~~~Idl~al~~N~~~l~~~~~~~~~l~aVvKanaYGhg~~~va~~l~~~-~~~f~va~~~Ea~~lr~~G~~~-~il 83 (367)
T 3mub_A 6 HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQDD-VDGFCVSNIDEAIELRQAGLSK-PIL 83 (367)
T ss_dssp TSSCEEEECHHHHHHHHHHHHHTSCTTCEEEEECHHHHHTTCHHHHHHHHGGG-CSEEEESSHHHHHHHHHTTCCS-CEE
T ss_pred cCCeEEEEeHHHHHHHHHHHHHhCCCCCEEEEEECcccccCCHHHHHHHHHHh-CCeEEEeEHHHHHHHHHcCCCC-CEE
Confidence 3456899999999999999999886 79999999995 458999999888 7 99999999999999999975 566
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHC---CCCeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWH---PKCELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLLGAA 198 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~---~~~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l~~~ 198 (419)
+.|+. ++++++.++++++. .+|||+++++.+++.+ +..+++|+|+++ .+|+|+.+ +++.++++.+
T Consensus 84 vlg~~-~~~~~~~~~~~~l~-~~V~s~~~l~~l~~~a~~~~~~~V~lkvdtG---------m~R~G~~~~ee~~~~~~~i 152 (367)
T 3mub_A 84 ILGVS-EIEAVALAKEYDFT-LTVAGLEWIQALLDKEVDLTGLTVHLKIDSG---------MGRIGFREASEVEQAQDLL 152 (367)
T ss_dssp EEEEC-CGGGHHHHHHTTEE-EEECCHHHHHHHHHTTCCCTTCEEEEEECSS---------CCSSSBCSHHHHHHHHHHH
T ss_pred EEcCC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHHHHhcCCeeEEEEECCC---------CCcCCCCcHHHHHHHHHHH
Confidence 66664 67889999999875 6999999999999876 457888888874 38999998 8999988877
Q ss_pred HhcCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHHHhhCCCc
Q 045356 199 QASGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAIQTYFPNE 277 (419)
Q Consensus 199 ~~~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l~~~~~~~ 277 (419)
+++++++.|+|+|+++.+. +.....+|+++|.++.+.+++ .+.+++++..-+.-...+...+++|.++..|....
T Consensus 153 ~~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~----~~~~~h~~NSa~~l~~~~~~~d~vR~Gi~lYG~~p 228 (367)
T 3mub_A 153 QQHGVCVEGIFTHFATADEESDDYFNAQLERFKTILASMKE----VPELVHASNSATTLWHVETIFNAVRMGDAMYGLNP 228 (367)
T ss_dssp HHTTCEEEEEEECCSSTTSSCCHHHHHHHHHHHHHHHTCSS----CCSEEEEECHHHHHHCGGGCCSEEEECTTTTTCCT
T ss_pred ccCCcEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHHhhh----cCCeEEEecChHHhcCcccCCCeEEhhhHhhCCCC
Confidence 5588999999999998753 444556788888776654322 23445554322110000112244555555554321
Q ss_pred cCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeecccCCCCC
Q 045356 278 TAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASASHSNN 351 (419)
Q Consensus 278 ~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (419)
. +.. .+-..-..|++.|.++|+.+|.... +..|.....++.++.+++|++.. ++.+.+.. ...
T Consensus 229 -~-~~~----~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~----~R~ls~~~-v~i 297 (367)
T 3mub_A 229 -S-GAV----LDLPYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGW----TRDMQNFS-VLV 297 (367)
T ss_dssp -T-TTS----SCCSSCCCCCEEEEEECSEEEEECTTCEESGGGCEECSSCEEEEEESCCGGGTC----CGGGTTCE-EEE
T ss_pred -c-ccc----cccccCcceEEEEEEEEEEEEEcCCCCeeCCCCeEECCCCeEEEEEeecchhch----hhhcCCCe-EEE
Confidence 0 000 0011347899999999999998532 34566555555667777886665 44443321 224
Q ss_pred CceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCC
Q 045356 352 RTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389 (419)
Q Consensus 352 ~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~ 389 (419)
.+++++|+|+.|| |+++.|+.. ++++||.+++.+-
T Consensus 298 ~G~~~pivGrv~M--D~~~vDv~~-~~~~Gd~v~l~G~ 332 (367)
T 3mub_A 298 DGQACPIVGRVSM--DQITIRLPK-LYPLGTKVTLIGS 332 (367)
T ss_dssp TTEEEEBCSCCCS--SCEEEEESS-CCCTTCEEEEEEE
T ss_pred CCEEeEEeChhcc--cEEEEECCC-CCCCCCEEEEEeC
Confidence 6789999999999 999998854 4899999999863
No 34
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=99.96 E-value=8.3e-30 Score=253.01 Aligned_cols=307 Identities=17% Similarity=0.155 Sum_probs=214.8
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCC----cHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKCNP----EPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKan~----~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
...++.+||+++|++|++ +++.++ ++++++++|||+ ..+|++.+.+.|+ +|+|++++|+..++++|++. +|+
T Consensus 6 ~r~~~~~Idl~al~~N~~-l~~~~~~~~~l~aVvKAnaYGhg~~~va~~l~~~G~~~f~Va~~~Ea~~lr~aGi~~-~il 83 (382)
T 4a3q_A 6 YRSAYMNVDLNAVASNFK-VFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITA-KIL 83 (382)
T ss_dssp CSSEEEEEEHHHHHHHHH-HHHHHCTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHTTTCCS-EEE
T ss_pred cCCEEEEEEHHHHHHHHH-HHhhcCCCCEEEEEEeeccccCCHHHHHHHHHHCCCCEEEEeEHHHHHHHHhCCCCC-CEE
Confidence 345578999999999999 998774 799999999964 5899999999999 99999999999999999974 577
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCC-----CCeEEEEEecCCCCCCCCCCCCCCCCCHHH-HHHHHH
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHP-----KCELLIRIKSPVDGGARYPLDSKFGANPEE-VAHLLG 196 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~-----~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee-~~~~l~ 196 (419)
+.|+. ++++++.++++++. .+|||+++++.+++.+. ..+++|+|+++ .+|+|+.+++ +.++++
T Consensus 84 vlg~~-~~~~~~~~~~~~i~-~~V~s~~~l~~l~~~a~~~~~~~~~V~lkvDtG---------m~R~G~~~~e~~~~~~~ 152 (382)
T 4a3q_A 84 VLGVL-PAKDIDKAIQHRVA-LTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTG---------MGRLGIKDTNTYQEVIE 152 (382)
T ss_dssp ECSCC-CGGGHHHHHHTTCB-EEECCHHHHHHHHHTCCTTCCSCEEEEEEBCSS---------SSSSSBCCHHHHHHHHH
T ss_pred EEeCC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHHHHHcCCCceeEEEEECCC---------CCcCCCChHHHHHHHHH
Confidence 66764 67899999999986 69999999999998654 35566666653 3899999876 889988
Q ss_pred HHHh-cCCeEEEEEEeeCCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC--CCCHHHHHHHHHHHHHh
Q 045356 197 AAQA-SGLAVIGVAFHIGSEAT-NLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC--NPGFHEAASIIKDAIQT 272 (419)
Q Consensus 197 ~~~~-~~l~l~Glh~H~gs~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~--~~~~~~~~~~i~~~l~~ 272 (419)
.+++ +++++.|+|+|+++.+. +.+ ...|+++|.++.+.+ ..+.+++++..-+. -+ +...+++|.++..
T Consensus 153 ~i~~~~~l~l~Gl~tH~a~ad~~~~~-~~~Q~~~F~~~~~~l-----~~~~~~h~aNSa~~l~~~--~~~~d~vR~Gi~l 224 (382)
T 4a3q_A 153 IIQQYEQLVFEGVFTHFACADEPGDM-TTEQYQRFKDMVNEA-----IKPEYIHCQNSAGSLLMD--CQFCNAIRPGISL 224 (382)
T ss_dssp HHHHCTTEEEEEEECCC-------CH-HHHHHHHHHHHHTTS-----CCCSEEECCCHHHHHHCC--CTTCSEECCCGGG
T ss_pred HHHhCCCceEEEEEEECcCCCCCCch-HHHHHHHHHHHHHhh-----CCCCcEEEEcChhhhcCc--ccCCCeEeeccee
Confidence 8765 68999999999998753 333 667888877765533 13445665543211 01 1122455666665
Q ss_pred hCCCccCCCccEEEEcCcchhcccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeeeccc
Q 045356 273 YFPNETAAGHLSVISEPGRFLADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHILASA 346 (419)
Q Consensus 273 ~~~~~~~~~~~~li~EpGR~lv~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (419)
|.... ....- ..-..-..|++.|.++|+.+|.... +.+|.....+..+..+++|++.. ++-+.+
T Consensus 225 YG~~p----~~~~~-~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~----~R~~s~- 294 (382)
T 4a3q_A 225 YGYYP----SEYVQ-QKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGY----LRIMQG- 294 (382)
T ss_dssp GTCCS----SHHHH-HHCSSCCCCCEEEEEECCEEEC------------------CEEEEESCCGGGTC----CGGGTT-
T ss_pred ECCCc----ccccc-cccccCCceeEEEEEEEEEEEEcCCCCEEcCCCeEECCCCeEEEEEeecccccc----chhcCC-
Confidence 54321 01000 0001247899999999999998522 35566655566677778886665 444443
Q ss_pred CCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCC
Q 045356 347 SHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389 (419)
Q Consensus 347 ~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~ 389 (419)
......+++++|+|+.|| |+++.+++- ++++||.+++.+.
T Consensus 295 ~~v~i~G~~~pivGrv~M--D~~~vDvt~-~~~~Gd~V~l~G~ 334 (382)
T 4a3q_A 295 SFVNVNGHQCEVIGRVCM--DQTIVKVPD-QVKAGDSVILIDN 334 (382)
T ss_dssp CEEEETTEEEEBCSCCCS--SCEEEEECT-TCCTTCEEEEECS
T ss_pred CEEEECCEEEEEeeeeec--cEEEEECCC-CCCCCCEEEEEeC
Confidence 322346789999999999 999998866 7899999999865
No 35
>3hur_A Alanine racemase; structural genomics, isomerase, pyridoxal phosphate, PSI-2, protein structure initiative; 2.50A {Oenococcus oeni psu-1}
Probab=99.95 E-value=3.9e-29 Score=248.66 Aligned_cols=309 Identities=9% Similarity=0.083 Sum_probs=223.1
Q ss_pred CCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCC----cHHHHHHHHHc-CC-cEEEcCHHHHHHHHHCCCCCCcEE
Q 045356 49 LDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNP----EPAILETLAAL-GS-NFDCASPSEIQAVLALSVSPDRII 122 (419)
Q Consensus 49 ~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~----~~~v~~~l~~~-G~-g~~VaS~~E~~~a~~~G~~~~~Ii 122 (419)
+..++.++|+++|++|++.+++.-+++++++++|||+ ..+|++.+.+. |+ +|.|++++|+..++++|++. +|+
T Consensus 7 ~r~~~l~Idl~al~~N~~~l~~~~~~~~l~aVvKAnaYGHG~~~va~~l~~~~G~~~f~Va~~~Ea~~lr~aGi~~-~Il 85 (395)
T 3hur_A 7 HRPTWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSNLDEALELRQADLTL-PIW 85 (395)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHHTCSEEEEECCHHHHHTCHHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCCS-CEE
T ss_pred cCCeEEEEeHHHHHHHHHHHHhcCCCCEEEEEECCCccCCCHHHHHHHHHhcCCCCEEEEeeHHHHHHHHhcCCCC-CEE
Confidence 4456789999999999999998755799999999975 58899999999 98 99999999999999999864 677
Q ss_pred EcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhH-CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHh
Q 045356 123 YANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKW-HPKCELLIRIKSPVDGGARYPLDSKFGANPEE-VAHLLGAAQA 200 (419)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~-~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee-~~~~l~~~~~ 200 (419)
+.|+. ++++++.++++++. .+|+|+++++.+++. . ..+++|+|+++ .+|+|+.+++ +.++++.+++
T Consensus 86 vlg~~-~~~~~~~~~~~~l~-~~V~s~~~l~~l~~~~~-~~~V~lkvDtG---------m~R~G~~~~e~~~~~~~~i~~ 153 (395)
T 3hur_A 86 VLGAW-DYSDLKLFIDHDIV-ITIPSLAWLQNLPDFEG-TLKVSLAIDTG---------MTRIGFDKADEISAAKKIIDK 153 (395)
T ss_dssp ESSCC-CGGGHHHHHHTTEE-EEECCHHHHHTCCCCSS-CEEEEEEBCCS---------SCSSSBCCHHHHHHHHHHHHH
T ss_pred EEcCC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHhcC-CCcEEEEEcCC---------CCCcCCChHHHHHHHHHHHHh
Confidence 77775 67899999998875 699999999988765 2 44556666553 3899999886 8888888766
Q ss_pred -cCCeEEEEEEeeCCCCC-CHH---HHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC--CCCHHHH--HHHHHHHHH
Q 045356 201 -SGLAVIGVAFHIGSEAT-NLD---AFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC--NPGFHEA--ASIIKDAIQ 271 (419)
Q Consensus 201 -~~l~l~Glh~H~gs~~~-~~~---~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~--~~~~~~~--~~~i~~~l~ 271 (419)
+++++.|+++|+++.+. +.+ ...+|+++|.++.+.++ ..+.+++++..-+. .++ ... .+++|.++.
T Consensus 154 ~~~l~l~Gl~TH~a~ad~~~~~~~~~~~~Q~~~F~~~~~~l~----~~~~~~h~aNSa~~l~~~~-~~~~~~d~vR~Gi~ 228 (395)
T 3hur_A 154 NPQLDLFSVYTHFATADEAGEKSKAYFEEQLRRWQELTINQG----FDPSLFSMANSATCIWHHD-DPRISFAAIRPGQL 228 (395)
T ss_dssp CTTEEEEEEECCCTTTTSCSHHHHHHHHHHHHHHHHHHTTSC----CCGGGEECCCHHHHHHTTT-CTTSCCSEECCCGG
T ss_pred CCCceEEEEEEeCcCCCCCCCcchHHHHHHHHHHHHHHHhcc----CCCCeEEEcCCHHHhcCcc-cccccCceEecChh
Confidence 68999999999998754 444 45678888877655332 23445555433211 011 012 345666666
Q ss_pred hhCCCccCCCccEEEEcCcchh--cccceEEEEEEEEEEEeCC------ceEEEEecCCCCCcchhhhHHHHhhcceeee
Q 045356 272 TYFPNETAAGHLSVISEPGRFL--ADTAFTLATKVIGKRVRDE------LREYWINDGKYGSFGWLSSEEVIAKCGAHIL 343 (419)
Q Consensus 272 ~~~~~~~~~~~~~li~EpGR~l--v~~a~~lvt~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~~~~ 343 (419)
.|.... . +.. ..+ ..- ..|++.|.++|+.+|.... +.+|.....++.++.+++|++.. ++.+
T Consensus 229 LYG~~p-~-~~~--~~~--~~~~~l~pv~~l~a~Ii~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~----~R~l 298 (395)
T 3hur_A 229 ISGVNV-S-NGE--LKM--PPNLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGW----LRRM 298 (395)
T ss_dssp GGTCCT-T-TTS--SCC--CTTCCCCCCEEEEEECCEEEEECTTCBSSTTCSCBCSSSEEEEEESCCTTCGG----GGGE
T ss_pred hcCCCC-C-ccc--ccc--ccccccceeEEEEEEEEEEEEeCCCCeEcCCCeEECCCCcEEEEEEecccccc----chhc
Confidence 664321 0 000 000 123 7899999999999998522 34555444445566677775554 4434
Q ss_pred cccCCCCCCceeeEEeccCCCCCCccccCCCCCCCCCCCEEEEcCC
Q 045356 344 ASASHSNNRTYRSTVFGPTCAAVDKVFTGHQLPELEVSDWLVFSDM 389 (419)
Q Consensus 344 ~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~lv~~~~ 389 (419)
.+ ......+++++|+|+.|| |+++.+++- ++++||.+++.+.
T Consensus 299 s~-~~v~i~G~~~pivGrv~M--D~~~vDvt~-~~~~GD~V~l~G~ 340 (395)
T 3hur_A 299 QK-SSVIINGKRMPIIGRITM--DQTMVKLDR-KYPIGTRVTLIGK 340 (395)
T ss_dssp EE-EEEEETTEEEEBCSCCCS--SCEEEECSS-CCCTTCEEEEEES
T ss_pred CC-CeEEECCEEEEEECceec--cEEEEECCC-CCCCCCEEEEEcC
Confidence 33 222246789999999999 999998876 7999999999864
No 36
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=99.93 E-value=2e-23 Score=210.61 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=166.1
Q ss_pred CCCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEE
Q 045356 47 QELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 47 ~~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~ 123 (419)
.+++||+++||+++|++|++.+++.++ +++++|++|||..+++++.+.+.|+ +|+|+|++|++.++++|+ ++|++
T Consensus 42 ~~~~tP~~viDl~al~~N~~~l~~~~~~~gv~l~~vvKah~~~~va~~l~~~G~~g~~vas~~Ea~~l~~~Gi--~~ill 119 (426)
T 3gwq_A 42 EDVSLPAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTTMAPQLFRRQLETGAWGITLATAHQVRAAYHGGV--SRVLM 119 (426)
T ss_dssp TCBCSSEEEEEHHHHHHHHHHHHHHHHHHCCEECCBCTTTCCHHHHHHHHHTTCCCEEESSHHHHHHHHHTTC--CEEEE
T ss_pred ccCCCCeEEEeHHHHHHHHHHHHHHHhhcCCEEEEEEccCCCHHHHHHHHHCCCCeEEEeCHHHHHHHHHCCC--CeEEE
Confidence 378999999999999999999999884 7899999999999999999999998 999999999999999998 57999
Q ss_pred cCCCCCHHHHHHHHHC----CCc-EEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCC-HHHHHH
Q 045356 124 ANACKPVSHIKYAASV----GVN-LTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGAN-PEEVAH 193 (419)
Q Consensus 124 ~gp~k~~~~l~~a~~~----gi~-~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~-~ee~~~ 193 (419)
.++...+++++.+++. ++. .++|||+++++.|++. .+..+|+|+|+++ .+|+|+. .+++.+
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~l~~~Vds~~~l~~L~~~a~~~~~~~~V~l~VdtG---------~~R~Gv~~~~e~~~ 190 (426)
T 3gwq_A 120 ANQLVGRRNMMMVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVP---------GGRTGVRDAAQRNA 190 (426)
T ss_dssp CSCCCSHHHHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCCEEEEEEECCT---------TSSSSBCSHHHHHH
T ss_pred ECCcCCHHHHHHHHHHhhcCCccEEEEeCCHHHHHHHHHHHHHCCCeeEEEEEeCCC---------CCcCCCCCHHHHHH
Confidence 8887778888877542 343 3589999999999875 3457888888875 3899997 588999
Q ss_pred HHHHHHh-c-CCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCC---cceEEEeCCC
Q 045356 194 LLGAAQA-S-GLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMT---KMRVLDIGGG 252 (419)
Q Consensus 194 ~l~~~~~-~-~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~ldiGGG 252 (419)
+++.+.+ + ++++.|||+|.|+. .+.+.++++++++.++++.+++.| . ++.++++||.
T Consensus 191 l~~~i~~~~~~l~l~Gl~th~g~~-~~~~~~~~~~~~l~~l~~~L~~~g-~~~~~~~~lS~G~S 252 (426)
T 3gwq_A 191 VLEAITRYPDTLKLAGVELYEGVL-KEEHEVREFLQSAVAVTRELVEQE-RFARAPAVLSGAGS 252 (426)
T ss_dssp HHHHHHTSTTTEEEEEEEECGGGC-CSHHHHHHHHHHHHHHHHHHHHHT-CCSSSSEEEEECCS
T ss_pred HHHHHHcCCCCEEEEeEEEEcccc-CCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCEEEecCC
Confidence 9988876 6 89999999999885 466778888999999999888877 5 7899998877
No 37
>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis}
Probab=99.92 E-value=9.9e-25 Score=217.16 Aligned_cols=191 Identities=15% Similarity=0.189 Sum_probs=157.5
Q ss_pred CCCCCcEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEE
Q 045356 47 QELDEPFYVLDLGVVISLYHQLISNLP--MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 47 ~~~~tP~~v~d~~~l~~ni~~~~~~~~--~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~ 123 (419)
++++||+++||+++|++|++.+++.++ ++++++++|||..+++++.+.+.|+ +|+|++++|++.++++|++ ++++
T Consensus 10 ~~~~tP~~~idl~al~~N~~~l~~~~~~~~~~l~~vvKah~~~~va~~l~~~G~~~~~va~~~Ea~~l~~~Gi~--~~il 87 (376)
T 3llx_A 10 AHPDTPYLLIDEAKLKSNINYLKQRVESLGSHLRPHLKTLRTLEAAGYLLDSKSAPATVSTLAEAEAYAKAGYT--DLLY 87 (376)
T ss_dssp GSSCSSEEEEEHHHHHHHHHHHHHHHHHTTCCBCCBCTTTCBHHHHHHHCSSTTSCEEESSHHHHHHHHHTTCC--EEEE
T ss_pred hhCCCcEEEEcHHHHHHHHHHHHHHHHhCCCeEEEEecccCCHHHHHHHHhcCCCcEEEecHHHHHHHHhCCCC--cEEE
Confidence 478999999999999999999999885 7999999999999999999999998 9999999999999999995 3444
Q ss_pred cCCCCCHHHHHHHH-----HCCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHH--HH
Q 045356 124 ANACKPVSHIKYAA-----SVGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGANPEE--VA 192 (419)
Q Consensus 124 ~gp~k~~~~l~~a~-----~~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee--~~ 192 (419)
..+.. +++++.++ +.++ .++|||+++++.|++. .+..+|+|+|+++ ++|+|+.+++ +.
T Consensus 88 ~~~~~-~~~~~~~~~l~~~~~~l-~~~Vds~~~l~~l~~~a~~~~~~~~V~l~vdtG---------~~R~G~~~~~~~l~ 156 (376)
T 3llx_A 88 AVGIA-PAKLKRVAALRQQGINL-HILLDNITQAQAVVDYAAEFGQDFSVFIEIDSD---------DHRGGIKPSDSKLL 156 (376)
T ss_dssp EEECC-GGGHHHHHHHHHTTCEE-EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSS---------SSSSCBCTTCTHHH
T ss_pred eCCCC-HHHHHHHHHhhccCCeE-EEEECCHHHHHHHHHHHHhcCCceEEEEEECCC---------CCCCCCCCchHHHH
Confidence 43444 68888887 3444 3589999999999875 4567888888875 3899999876 66
Q ss_pred HHHHHHHhcCCeEEEEEEeeCCCCC--CH----HHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC
Q 045356 193 HLLGAAQASGLAVIGVAFHIGSEAT--NL----DAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFA 254 (419)
Q Consensus 193 ~~l~~~~~~~l~l~Glh~H~gs~~~--~~----~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~ 254 (419)
++++.+ ++++.|||+|+|+... ++ ..+.++++.+.++.+.+++.| .++.++++||+.+
T Consensus 157 ~~~~~l---~l~l~Gl~th~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~l~~~g-~~~~~vs~g~S~~ 220 (376)
T 3llx_A 157 TIAKTL---GEHFTGLMTHAGGSYACNTEQGLKNFAKQECDAVRIARNNLETAG-IHCAITSVGSTPT 220 (376)
T ss_dssp HHHHHH---GGGEEEEECCCGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCEEEECCHHH
T ss_pred HHHHHh---CCEEeEEEEecccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCEEEEcCChh
Confidence 666655 8999999999998742 22 235678888888888888888 7889999998843
No 38
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=99.85 E-value=3.4e-20 Score=177.23 Aligned_cols=188 Identities=14% Similarity=0.156 Sum_probs=148.9
Q ss_pred EEEeHHHHHHHHHHHHHhCC----CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHC--------------
Q 045356 54 YVLDLGVVISLYHQLISNLP----MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLAL-------------- 114 (419)
Q Consensus 54 ~v~d~~~l~~ni~~~~~~~~----~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~-------------- 114 (419)
+.+|+++|++|++.+++..+ +++++|++|++....|++. .+.|+ +|+|++++|+..++++
T Consensus 25 l~idl~ai~~Ni~~~~~~~~~~~~~~~l~avvK~hg~~~va~~-~~~G~~~f~va~~~Ea~~lr~~l~~~~~~~g~~~~~ 103 (282)
T 3cpg_A 25 ITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIMAA-IDAGVRMIGENRPQEVTAKAEGLARRCAERGFSLGV 103 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTTCCHHHHHHH-HHTTCCCEEESCHHHHHHHHHHHHHHHHHTTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCCHHHHHHH-HHCCCCEEEEEeHHHHHHHHHhhhhhcccccccccc
Confidence 45789999999999998873 6899999999999999998 68898 9999999999999988
Q ss_pred -CCC----CCcEEE--cCCCCCHHHHHHHHH-CCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCC
Q 045356 115 -SVS----PDRIIY--ANACKPVSHIKYAAS-VGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDS 182 (419)
Q Consensus 115 -G~~----~~~Ii~--~gp~k~~~~l~~a~~-~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~s 182 (419)
|++ +..|.| .|+.+ .++++.+++ .++ .++|||+++++.|++. .+..+|+|+|+++.+ .+
T Consensus 104 ~G~~~d~~~~~i~~~~iG~~~-~~~~~~~~~~~~l-~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-------~~ 174 (282)
T 3cpg_A 104 AGAAPDAAAEHIPFHLIGQLQ-SNKIGKVLPVVDT-IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-------ES 174 (282)
T ss_dssp C------CCEEECEEECSCCC-GGGHHHHTTTCSE-EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-------TT
T ss_pred ccccccccccceeeeecChhH-HHHHHHHHHhCCE-EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-------CC
Confidence 773 334554 47655 467888887 666 3699999999999864 456789999998743 29
Q ss_pred CCCCCHHHHHHHHHHHHh-cCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCC--cceEEEeCCC
Q 045356 183 KFGANPEEVAHLLGAAQA-SGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARL-GMT--KMRVLDIGGG 252 (419)
Q Consensus 183 RfGi~~ee~~~~l~~~~~-~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~-g~~--~~~~ldiGGG 252 (419)
|||++++++.++++.++. +++++.|||+|++++. +++....+++++.++.+.+++. |+. .+..+++|+.
T Consensus 175 R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th~~~~~-~~~~~~~~~~~l~~~~~~l~~~~g~~~~~~~~lS~g~S 247 (282)
T 3cpg_A 175 KSGCDPAHAIRIAQKIGTLDGIELQGLMTIGAHVH-DETVIRRGFSHLRKTRDLILASGEPGTDRCRELSMGMT 247 (282)
T ss_dssp SSSBCGGGHHHHHHHHHTCTTEEEEEEECCCCCSS-CHHHHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCT
T ss_pred CCCcCHHHHHHHHHHHHhCCCceEEeEEEECCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCEEEecCc
Confidence 999999999999998876 5899999999999875 5565666778888887777764 521 3667885544
No 39
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=99.74 E-value=3.9e-17 Score=152.22 Aligned_cols=167 Identities=14% Similarity=0.140 Sum_probs=134.9
Q ss_pred CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCC----CCcEEEcCCCCCHHHHHHHHH-CCCcEEEec
Q 045356 74 MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVS----PDRIIYANACKPVSHIKYAAS-VGVNLTTFD 147 (419)
Q Consensus 74 ~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~----~~~Ii~~gp~k~~~~l~~a~~-~gi~~i~vd 147 (419)
++++++++|+++.. .++.+.+.|+ .|.++.++|+...++.+.. +-.+.+.|+.. +++++.+++ .++. .+||
T Consensus 29 ~v~l~AV~Kahg~~-~i~~~~~~G~~~fgen~vqEa~~kr~~~~~~~~~~i~w~~iG~lq-~nk~~~~~~~~~~i-~sVd 105 (245)
T 3sy1_A 29 EITLVAVSKTKPAS-AIAEAIDAGQRQFSEHYVQEGVDKIRHFQELGVTGLEWNFAGPLQ-SNKSRLVAEHFDWC-ITID 105 (245)
T ss_dssp GCEEEEECTTCCHH-HHHHHHHTTCCEEEESSHHHHHHHHHHHHHHTCCSCEEEECSCCC-GGGHHHHHHHCSEE-EEEC
T ss_pred CcEEEEEECCCCHH-HHHHHHHcCCCEEEEecHHHHHHHHHhhhhccCCCeEEeecCCCC-hHHHHHHHHHCCEE-EecC
Confidence 68999999998854 4677889999 9999999999988887542 22357788865 578888874 5543 5999
Q ss_pred CHHHHHHHHhHCC----CCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cCCeEEEEEEeeCCCCCCHHHH
Q 045356 148 SIQELDKIRKWHP----KCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-SGLAVIGVAFHIGSEATNLDAF 222 (419)
Q Consensus 148 S~~el~~i~~~~~----~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~~l~l~Glh~H~gs~~~~~~~~ 222 (419)
|+++++.|++.++ ..+|+|+||++.+ .+|+|++++++.++++.+.. ++|++.|||+|. +...+++.+
T Consensus 106 s~~~a~~l~~~a~~~~~~~~V~lqVntG~e-------~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~~-~~~~d~~~~ 177 (245)
T 3sy1_A 106 RLRIATRLNDQRPAELPPLNVLIQINISDE-------NSKSGIQLAELDELAAAVAELPRLRLRGLSAIP-APESEYVRQ 177 (245)
T ss_dssp CHHHHHHHHHHSCTTSCCEEEEEEBCCSCT-------TCCSSBCGGGHHHHHHHHTTCTTEEEEEEECCC-CCCSCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCceEEEEEECCCC-------cCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEeC-CCCCCHHHH
Confidence 9999999998753 4688888888643 38999999999999988866 689999999996 445678888
Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEeCCC
Q 045356 223 HAAIAEAKTVFETAARLGMTKMRVLDIGGG 252 (419)
Q Consensus 223 ~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG 252 (419)
++.++++.++.+.+++.+ ..+++|++|+.
T Consensus 178 ~~~f~~l~~l~~~l~~~~-~~~~~LSmGmS 206 (245)
T 3sy1_A 178 FEVARQMAVAFAGLKTRY-PHIDTLALGQS 206 (245)
T ss_dssp HHHHHHHHHHHHHHHTTS-TTCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHhC-CCCCEEeccCc
Confidence 889999999999888777 68899996655
No 40
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=99.66 E-value=1.1e-15 Score=143.53 Aligned_cols=179 Identities=15% Similarity=0.115 Sum_probs=131.8
Q ss_pred eHHHHHHHHHHHHHhC-----C-CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEEEc--CCC
Q 045356 57 DLGVVISLYHQLISNL-----P-MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVSPDRIIYA--NAC 127 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~-----~-~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii~~--gp~ 127 (419)
|++++++|++++.+.. | ++++++++|+++...|. .+.+.|+ +|.|++++|+...+++ ++. .|.|. |+.
T Consensus 17 nl~~v~~~i~~~~~~~~r~~~~~~v~l~aVvK~hg~~~i~-~~~~aG~~~fgva~vqEa~~~r~~-~~~-~l~~h~iG~l 93 (256)
T 1ct5_A 17 QYESVREVVNAEAKNVHVNENASKILLLVVSKLKPASDIQ-ILYDHGVREFGENYVQELIEKAKL-LPD-DIKWHFIGGL 93 (256)
T ss_dssp HHHHHHHHHHHHHHTC-------CCEEEEECTTSCHHHHH-HHHHHTCCEEEECCHHHHHHHHHH-SCT-TCEEEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEECCCCHHHHH-HHHHcCCCEEEEEcHHHHHHHHHh-ccc-CeeEeecCCC
Confidence 4678889998888776 4 68999999999987776 5888998 9999999999999988 643 46665 764
Q ss_pred CCHHHHHHH--H-HCCCcEEEecCHHHHHHHHhH----CC---CCeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHHH
Q 045356 128 KPVSHIKYA--A-SVGVNLTTFDSIQELDKIRKW----HP---KCELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLLG 196 (419)
Q Consensus 128 k~~~~l~~a--~-~~gi~~i~vdS~~el~~i~~~----~~---~~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l~ 196 (419)
..++++.+ + ..++ ..+|||++.++.|++. .+ ..+|+|.||++.+ .+|+|+.+ +++.++++
T Consensus 94 -q~nk~~~~~~~~~~~l-~~sVds~~~a~~l~~~a~~~~~~~~~l~V~lqVdtG~e-------~~R~G~~~~~e~~~l~~ 164 (256)
T 1ct5_A 94 -QTNKCKDLAKVPNLYS-VETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHE-------DQKSGLNNEAEIFEVID 164 (256)
T ss_dssp -CGGGHHHHHHCTTEEE-EEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSS-------CCSSSBCCHHHHHHHHH
T ss_pred -CHHHHHHHhcccccCE-EEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEECCCC-------CCCcCcCchHHHHHHHH
Confidence 35778877 4 4444 3599999999998774 34 5688888888643 39999998 89999998
Q ss_pred HHH--h-cCCeEEEEEEee--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe
Q 045356 197 AAQ--A-SGLAVIGVAFHI--GSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDI 249 (419)
Q Consensus 197 ~~~--~-~~l~l~Glh~H~--gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldi 249 (419)
.+. . ++|++.|||+|+ +.. .+++....+++++.++.+.+++ ++.++..+++
T Consensus 165 ~i~~~~~~~L~l~Glmth~~~~~a-d~~~~~~~~f~~~~~~~~~l~~-~~~~~~~lS~ 220 (256)
T 1ct5_A 165 FFLSEECKYIKLNGLMTIGSWNVS-HEDSKENRDFATLVEWKKKIDA-KFGTSLKLSM 220 (256)
T ss_dssp HHHSTTCCSEEEEEEECCCCCC----------HHHHHHHHHHHHHHH-HHCCCCEEEC
T ss_pred HHHHccCCCeeEEEEEEECCcCCC-CCHHHHHHHHHHHHHHHHHHHh-cCCCCCEEEe
Confidence 887 6 589999999999 544 2334455778888877777776 4113566753
No 41
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=99.61 E-value=2.1e-14 Score=133.38 Aligned_cols=174 Identities=13% Similarity=0.095 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHhC---C-CCceeeeeccCCcHHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCC---CCcEEEcCCCCCH
Q 045356 59 GVVISLYHQLISNL---P-MVHPYYAVKCNPEPAILETLAALGS-NFDCASPSEIQAVLALSVS---PDRIIYANACKPV 130 (419)
Q Consensus 59 ~~l~~ni~~~~~~~---~-~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~---~~~Ii~~gp~k~~ 130 (419)
..+++++++..+.. | ++++++++|+++... ++.+.+.|+ .|.|+.++|+...++.+.. +-.+++.|+.. +
T Consensus 11 ~~v~~~i~~a~~~~~r~~~~v~l~AVvKahga~~-i~~~~~~G~~~fgen~vqEa~~kr~~~~~~~~~i~wh~iG~lq-~ 88 (244)
T 3r79_A 11 EDVRQRIADVAEKSGRKAADVALVAVSKTFDAEA-IQPVIDAGQRVFGENRVQEAQGKWPALKEKTSDIELHLIGPLQ-S 88 (244)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSEEEEECTTCCHHH-HHHHHHTTCCEEEESCHHHHHHHHHHHHHHSTTCEEEECSCCC-G
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEECCcCHHH-HHHHHHCCCCEEEEeeHHHHHHHHHhccccCCCeEEEecCCCC-H
Confidence 44555554444433 2 589999999988755 477889998 9999999999998887642 22347788864 5
Q ss_pred HHHHHHHH-CCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHh-cCCe
Q 045356 131 SHIKYAAS-VGVNLTTFDSIQELDKIRKW----HPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQA-SGLA 204 (419)
Q Consensus 131 ~~l~~a~~-~gi~~i~vdS~~el~~i~~~----~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~-~~l~ 204 (419)
++++.+++ .++. .+|||++.++.|++. .+..+|+|+|+++.+ .+|+|+.++++.++++.+.. ++|+
T Consensus 89 nk~~~~v~~~~~i-~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~e-------~~R~Gv~~ee~~~l~~~i~~l~~L~ 160 (244)
T 3r79_A 89 NKAADAVALFDVV-ESIDREKIARALSEECARQGRSLRFYVQVNTGLE-------PQKAGIDPRETVAFVAFCRDELKLP 160 (244)
T ss_dssp GGHHHHHHHCSEE-EEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTCC-------TTSCSBCHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHCCEE-EeeCCHHHHHHHHHHHHHcCCCceEEEEEECCCC-------cCCCCCCHHHHHHHHHHHHcCCCCE
Confidence 78888885 5553 599999999988765 467899999998643 38999999999999988876 6999
Q ss_pred EEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC
Q 045356 205 VIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGG 252 (419)
Q Consensus 205 l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG 252 (419)
+.||++|++... +++ .+++.++++.+ .. .+..|++|..
T Consensus 161 l~GlmTh~a~~d-d~~---~~f~~l~~l~~---~l---~~~~lSmGmS 198 (244)
T 3r79_A 161 VEGLMCIPPAEE-NPG---PHFALLAKLAG---QC---GLEKLSMGMS 198 (244)
T ss_dssp CCEEECCCCTTS-CSH---HHHHHHHHHHH---HH---TCCEEECCCT
T ss_pred EEEEEecCCCCC-CHH---HHHHHHHHHHH---hC---CCCEEEeecc
Confidence 999999986643 343 34444444433 22 3567875544
No 42
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=82.58 E-value=7.7 Score=35.16 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEEeeCC--C--CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHH
Q 045356 185 GANPEEVAHLLGAAQASGLAVIGVAFHIGS--E--ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFH 260 (419)
Q Consensus 185 Gi~~ee~~~~l~~~~~~~l~l~Glh~H~gs--~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~ 260 (419)
.++.+++.++.+.+++.++++..+.+|..- + ..+++...+.++.+.+.++.++.+| .+.-.++.|... ..+.+
T Consensus 43 ~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG-~~~v~~~~g~~~--~~~~~ 119 (287)
T 2x7v_A 43 LPSDEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKEVEICRKLG-IRYLNIHPGSHL--GTGEE 119 (287)
T ss_dssp CCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHT-CCEEEECCEECT--TSCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecCCCC--CCCHH
Confidence 345667777777788889986444556322 1 2355666677888888899888988 443233333322 12334
Q ss_pred HHHHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 261 EAASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 261 ~~~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
+..+.+.+.+++..... ..+++.+|+-
T Consensus 120 ~~~~~~~~~l~~l~~~~---~gv~l~lEn~ 146 (287)
T 2x7v_A 120 EGIDRIVRGLNEVLNNT---EGVVILLENV 146 (287)
T ss_dssp HHHHHHHHHHHHHHTTC---CSCEEEEECC
T ss_pred HHHHHHHHHHHHHHccc---CCCEEEEeCC
Confidence 44444445555544321 2389999975
No 43
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=82.11 E-value=8.5 Score=34.54 Aligned_cols=94 Identities=20% Similarity=0.257 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC-CCCHHHHHHHHHH
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC-NPGFHEAASIIKD 268 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~-~~~~~~~~~~i~~ 268 (419)
++.++.+.+++.++.+.+++.+..-...+++...+.++.+++.++.++.+| .+.-.+.. |+.+. ..+.++..+.+.+
T Consensus 46 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG-~~~v~~~~-g~~~~~~~~~~~~~~~~~~ 123 (275)
T 3qc0_A 46 GLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELG-ADCLVLVA-GGLPGGSKNIDAARRMVVE 123 (275)
T ss_dssp CHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTT-CSCEEEEC-BCCCTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhC-CCEEEEee-CCCCCCCcCHHHHHHHHHH
Confidence 455566667778999998887532223466667777888888999899998 45434443 33432 1233333333333
Q ss_pred HHHhh---CCCccCCCccEEEEcC
Q 045356 269 AIQTY---FPNETAAGHLSVISEP 289 (419)
Q Consensus 269 ~l~~~---~~~~~~~~~~~li~Ep 289 (419)
.+++. ..+. | +++.+||
T Consensus 124 ~l~~l~~~a~~~-g---v~l~lE~ 143 (275)
T 3qc0_A 124 GIAAVLPHARAA-G---VPLAIEP 143 (275)
T ss_dssp HHHHHHHHHHHH-T---CCEEECC
T ss_pred HHHHHHHHHHHc-C---CEEEEeE
Confidence 33322 2221 3 7899997
No 44
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=80.56 E-value=14 Score=34.12 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=32.0
Q ss_pred EeHHHHHHHHHHHHHh-CCCCceeee--eccCC----cHHHHHHHHHc-CCc--EEEcCHHHHHHHHHCCCC
Q 045356 56 LDLGVVISLYHQLISN-LPMVHPYYA--VKCNP----EPAILETLAAL-GSN--FDCASPSEIQAVLALSVS 117 (419)
Q Consensus 56 ~d~~~l~~ni~~~~~~-~~~~~i~~a--vKan~----~~~v~~~l~~~-G~g--~~VaS~~E~~~a~~~G~~ 117 (419)
++.+...+-++++.+. ++-+++.+. .|.-+ ..++++.+.+. ++. .-+.+...++.+.++|++
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~~n~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVPNMKGYEAAAAAHAD 94 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECSSHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHCCCC
Confidence 6666666666666442 122333221 22111 23555555443 432 223677778888888874
No 45
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=80.45 E-value=5.9 Score=35.94 Aligned_cols=99 Identities=10% Similarity=0.104 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEEeeCCC----CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC-CCCHH
Q 045356 186 ANPEEVAHLLGAAQASGLAVIGVAFHIGSE----ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC-NPGFH 260 (419)
Q Consensus 186 i~~ee~~~~l~~~~~~~l~l~Glh~H~gs~----~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~-~~~~~ 260 (419)
++.+++.++.+.+++.++.+..+.+|..-. ..+++...+.++.+++.++.+..+| .+ ++.+..|... ..+.+
T Consensus 44 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lG-a~--~v~~~~g~~~~~~~~~ 120 (285)
T 1qtw_A 44 LTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG-LS--LLNFHPGSHLMQISEE 120 (285)
T ss_dssp CCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTT-CC--EEEECCCBCTTTSCHH
T ss_pred CCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEECcCCCCCCCCHH
Confidence 456677777777888888864444553211 2356666777888888888888888 44 3444333222 12334
Q ss_pred HHHHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 261 EAASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 261 ~~~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
+..+.+.+.+++......+ +++.+|+-
T Consensus 121 ~~~~~~~~~l~~l~a~~~g---v~l~lEn~ 147 (285)
T 1qtw_A 121 DCLARIAESINIALDKTQG---VTAVIENT 147 (285)
T ss_dssp HHHHHHHHHHHHHHHHCSS---CEEEEECC
T ss_pred HHHHHHHHHHHHHHhccCC---CEEEEecC
Confidence 3333333334333222113 88999974
No 46
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=80.28 E-value=45 Score=32.40 Aligned_cols=144 Identities=18% Similarity=0.301 Sum_probs=82.2
Q ss_pred cEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 045356 99 NFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARY 178 (419)
Q Consensus 99 g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~ 178 (419)
|+|++++.|++ +.|.. .+....+..+.++.+.+.|++. |.||+......
T Consensus 27 G~Dis~~~~~e---~~G~~----y~~~~G~~~d~~~ilk~~G~N~--------------------VRlrvwv~p~~---- 75 (399)
T 1ur4_A 27 GVDVSSIIALE---ESGVA----FYNESGKKQDIFKTLKEAGVNY--------------------VRVRIWNDPYD---- 75 (399)
T ss_dssp EEECTTHHHHH---HTTCC----CBCTTSCBCCHHHHHHHTTCCE--------------------EEEEECSCCBC----
T ss_pred EEehhhhHHHH---HcCCe----eeCCCCccchHHHHHHHCCCCE--------------------EEEeeecCCcc----
Confidence 99999998865 46642 2331223334566666778774 33455432110
Q ss_pred CCCCCC--C-CCHHHHHHHHHHHHhcCCeEEEEEEeeC-------CCC-------CCHHHHH-HHHHHHHHHHHHHHHcC
Q 045356 179 PLDSKF--G-ANPEEVAHLLGAAQASGLAVIGVAFHIG-------SEA-------TNLDAFH-AAIAEAKTVFETAARLG 240 (419)
Q Consensus 179 ~~~sRf--G-i~~ee~~~~l~~~~~~~l~l~Glh~H~g-------s~~-------~~~~~~~-~~~~~~~~l~~~l~~~g 240 (419)
..+.-+ | .+.+.+.++++++++.|+++. |-+|.+ ++. .+.+.+. ...+....+++.+++.+
T Consensus 76 ~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVl-ldfHysD~WadPg~Q~~P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g 154 (399)
T 1ur4_A 76 ANGNGYGGGNNDLEKAIQIGKRATANGMKLL-ADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAG 154 (399)
T ss_dssp TTCCBCSTTCCCHHHHHHHHHHHHHTTCEEE-EEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCccCCCCCCHHHHHHHHHHHHHCCCEEE-EEeccCCccCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 011222 2 467888888888989998876 567863 111 1233333 23345566777788887
Q ss_pred CCcceEEEeCC----CCCCCCCHHHHHHHHHH---HHHhhCC
Q 045356 241 MTKMRVLDIGG----GFACNPGFHEAASIIKD---AIQTYFP 275 (419)
Q Consensus 241 ~~~~~~ldiGG----G~~~~~~~~~~~~~i~~---~l~~~~~ 275 (419)
..+.++.+|- |+.....++.+++.++. ++++..+
T Consensus 155 -~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p 195 (399)
T 1ur4_A 155 -IDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDS 195 (399)
T ss_dssp -CCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCC
Confidence 6778887775 33323456776655544 4555554
No 47
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.26 E-value=15 Score=34.87 Aligned_cols=26 Identities=15% Similarity=0.149 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhcC--CeEEEEEEee
Q 045356 187 NPEEVAHLLGAAQASG--LAVIGVAFHI 212 (419)
Q Consensus 187 ~~ee~~~~l~~~~~~~--l~l~Glh~H~ 212 (419)
.|+++.++++.+++.- -...++|+|-
T Consensus 176 ~P~~v~~lv~~l~~~~~~~~pi~~H~Hn 203 (345)
T 1nvm_A 176 SMNDIRDRMRAFKAVLKPETQVGMHAHH 203 (345)
T ss_dssp CHHHHHHHHHHHHHHSCTTSEEEEECBC
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEECC
Confidence 5888888888876531 2356888884
No 48
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.09 E-value=14 Score=34.51 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=10.2
Q ss_pred cCHHHHHHHHHCCCC
Q 045356 103 ASPSEIQAVLALSVS 117 (419)
Q Consensus 103 aS~~E~~~a~~~G~~ 117 (419)
.+...++.+.++|++
T Consensus 84 ~~~~~i~~a~~aG~~ 98 (302)
T 2ftp_A 84 PNLKGFEAALESGVK 98 (302)
T ss_dssp CSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHhCCcC
Confidence 466777777777763
No 49
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=79.23 E-value=14 Score=33.03 Aligned_cols=95 Identities=14% Similarity=0.015 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCC-CCCHHHHHHHHHHH
Q 045356 191 VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFAC-NPGFHEAASIIKDA 269 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~-~~~~~~~~~~i~~~ 269 (419)
+.++.+.+++.++.+.++|+...-...+++...+.++.+++.++.++.+| .+. +.+-+|... ..+.++..+.+.+.
T Consensus 48 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG-~~~--v~~~~g~~~~~~~~~~~~~~~~~~ 124 (278)
T 1i60_A 48 LDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG-VKY--VVAVPLVTEQKIVKEEIKKSSVDV 124 (278)
T ss_dssp HHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT-CCE--EEEECCBCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC-CCE--EEEecCCCCCCCCHHHHHHHHHHH
Confidence 34555566778999998887652222366666677888888888888888 443 333223221 12323332333333
Q ss_pred HH---hhCCCccCCCccEEEEcCcch
Q 045356 270 IQ---TYFPNETAAGHLSVISEPGRF 292 (419)
Q Consensus 270 l~---~~~~~~~~~~~~~li~EpGR~ 292 (419)
++ ++..+. | +++.+|+-..
T Consensus 125 l~~l~~~a~~~-g---v~l~lEn~~~ 146 (278)
T 1i60_A 125 LTELSDIAEPY-G---VKIALEFVGH 146 (278)
T ss_dssp HHHHHHHHGGG-T---CEEEEECCCC
T ss_pred HHHHHHHHHhc-C---CEEEEEecCC
Confidence 32 222222 3 7899998653
No 50
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=76.51 E-value=10 Score=34.70 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEEeeC--C--CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC-CCCCH
Q 045356 185 GANPEEVAHLLGAAQASGLAVIGVAFHIG--S--EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFA-CNPGF 259 (419)
Q Consensus 185 Gi~~ee~~~~l~~~~~~~l~l~Glh~H~g--s--~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~-~~~~~ 259 (419)
.++.+++.++.+.+++.++.+.++++... - ...+++...+.++.+.+.++.++.+| .+ ++.+.|+.. ...+.
T Consensus 62 ~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG-~~--~v~~~~~~~~~~~~~ 138 (295)
T 3cqj_A 62 DWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVG-IR--VIQLAGYDVYYQEAN 138 (295)
T ss_dssp GCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHT-CC--EEEECCCSCSSSCCC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEECCCCCCcCcCH
Confidence 45667777777778888999998875311 1 12356666677888888899888888 44 344444322 11222
Q ss_pred HHHHHHHHHHHHh---hCCCccCCCccEEEEcCcc
Q 045356 260 HEAASIIKDAIQT---YFPNETAAGHLSVISEPGR 291 (419)
Q Consensus 260 ~~~~~~i~~~l~~---~~~~~~~~~~~~li~EpGR 291 (419)
++..+.+.+.+++ +..+. | +++.+|+-.
T Consensus 139 ~~~~~~~~~~l~~l~~~a~~~-G---v~l~lEn~~ 169 (295)
T 3cqj_A 139 NETRRRFRDGLKESVEMASRA-Q---VTLAMEIMD 169 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-T---CEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHh-C---CEEEEeeCC
Confidence 3222222222222 22221 3 789999864
No 51
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=76.33 E-value=12 Score=37.08 Aligned_cols=99 Identities=20% Similarity=0.220 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhcCCeEEEEEE----ee---------CC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAF----HI---------GS-EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFA 254 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~----H~---------gs-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~ 254 (419)
+++.++.+.+++.++.+.+++. |. |+ ...|++..+..++.+++.++...++| -+.-.+..|.|+.
T Consensus 107 ~d~~~lk~~l~e~GL~l~~i~~~~f~hp~~~~~~Y~~GnLtspD~~vR~~Ai~~lk~~Id~A~~LG-a~~lv~w~GdG~~ 185 (438)
T 3m0m_A 107 ADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTNAATRAQAVEHNLECIEIGKAIG-SKALTVWIGDGSN 185 (438)
T ss_dssp CCHHHHHHHHHHHTCEEEEEECCCSSCCTTCSSCCTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT-CCEEEECCCCEES
T ss_pred HHHHHHHHHHHHcCCceEEeecccccCchhcccccccCCCCCcCHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCCccC
Confidence 4555666667778999987665 32 11 13467777788899999999888988 4443344454443
Q ss_pred C--CCCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 255 C--NPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 255 ~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
. ..+.+...+.+.+.|.+.+... . ..+++.+||=
T Consensus 186 ~~~~~d~~~a~~rl~esL~ei~~~A-~-~gv~l~LE~K 221 (438)
T 3m0m_A 186 FPGQSNFTRAFERYLSAMAEIYKGL-P-DDWKLFSEHK 221 (438)
T ss_dssp STTTSCHHHHHHHHHHHHHHHHHTC-C-TTCEEEEECC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhh-h-cCCEEEEccC
Confidence 2 1234554455555555543321 0 2378999973
No 52
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=75.83 E-value=36 Score=29.33 Aligned_cols=95 Identities=9% Similarity=0.066 Sum_probs=59.7
Q ss_pred HHHHHHHHhCCCCceeeeeccCCcHH-HHHHHHHcCC-cEEEcCH------HHHH-HHHHCCCCCCcEE--EcCCCCCHH
Q 045356 63 SLYHQLISNLPMVHPYYAVKCNPEPA-ILETLAALGS-NFDCASP------SEIQ-AVLALSVSPDRII--YANACKPVS 131 (419)
Q Consensus 63 ~ni~~~~~~~~~~~i~~avKan~~~~-v~~~l~~~G~-g~~VaS~------~E~~-~a~~~G~~~~~Ii--~~gp~k~~~ 131 (419)
+.++++++.+++..+++-.|...-+. +++.+.+.|+ ++-+... .++. .+++.|. .++ +.++..+.+
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~t~~~ 118 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK---QVVVDMICVDDLPA 118 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC---EEEEECTTCSSHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC---eEEEEecCCCCHHH
Confidence 56777887777777888888876544 4888889997 5555432 2332 3444565 333 345543346
Q ss_pred HHHHHHHCCCcEEEec-----------CHHHHHHHHhHCC
Q 045356 132 HIKYAASVGVNLTTFD-----------SIQELDKIRKWHP 160 (419)
Q Consensus 132 ~l~~a~~~gi~~i~vd-----------S~~el~~i~~~~~ 160 (419)
.++.+.+.|+..+.++ +.+.++++.+..+
T Consensus 119 ~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~ 158 (211)
T 3f4w_A 119 RVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRR 158 (211)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCS
T ss_pred HHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcC
Confidence 7888888888765542 4566666666543
No 53
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=75.37 E-value=49 Score=31.09 Aligned_cols=134 Identities=14% Similarity=0.192 Sum_probs=75.2
Q ss_pred cEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 045356 99 NFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARY 178 (419)
Q Consensus 99 g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~ 178 (419)
|.|++++.|++ ++|.. .+...++..+.++.+.+.|++. +.+||..+..
T Consensus 6 g~d~s~~~~~e---~~g~~----~~~~~G~~~~~~~ilk~~G~n~--------------------vRlri~v~P~----- 53 (334)
T 1fob_A 6 GADISSLLLLE---DEGYS----YKNLNGQTQALETILADAGINS--------------------IRQRVWVNPS----- 53 (334)
T ss_dssp EEECTTHHHHH---HTTCC----CBCTTSCBCCHHHHHHHHTCCE--------------------EEEEECSCCT-----
T ss_pred eeeHHHHHHHH---HcCCE----EECCCCCCchHHHHHHHcCCCE--------------------EEEEEEECCC-----
Confidence 88999998875 46652 2332233345666666777764 3345543211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCC--------------CCCHHHHHHHH-HHHHHHHHHHHHcCCCc
Q 045356 179 PLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSE--------------ATNLDAFHAAI-AEAKTVFETAARLGMTK 243 (419)
Q Consensus 179 ~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~--------------~~~~~~~~~~~-~~~~~l~~~l~~~g~~~ 243 (419)
++ -.+.+...++++.+++.|+++. +-+|.+.. ..+.+...+.+ +....+++.+++.| ..
T Consensus 54 --~g--~~d~~~~~~~~~~ak~~Gl~v~-ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~~~~yt~~v~~~l~~~g-~~ 127 (334)
T 1fob_A 54 --DG--SYDLDYNLELAKRVKAAGMSLY-LDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAEND-ID 127 (334)
T ss_dssp --TC--TTCHHHHHHHHHHHHHTTCEEE-EEECCSSSCCBTTBCBCCTTSCSSCHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred --CC--ccCHHHHHHHHHHHHHCCCEEE-EEeccCCCCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHHhCC-CC
Confidence 11 1356788888888988998765 45665311 11233333333 33455667777777 67
Q ss_pred ceEEEeCCC----CCC----CCCHHHHHHHHHHHH
Q 045356 244 MRVLDIGGG----FAC----NPGFHEAASIIKDAI 270 (419)
Q Consensus 244 ~~~ldiGGG----~~~----~~~~~~~~~~i~~~l 270 (419)
+.++.+|-= +-. ...++.+++.++.+.
T Consensus 128 v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~ 162 (334)
T 1fob_A 128 IEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGA 162 (334)
T ss_dssp CSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHH
T ss_pred CCEEEEeecCcccccCCCCcchhHHHHHHHHHHHH
Confidence 777877742 211 114566666655543
No 54
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=75.20 E-value=13 Score=34.37 Aligned_cols=93 Identities=9% Similarity=-0.039 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCC---HHHHHHHH
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPG---FHEAASII 266 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~---~~~~~~~i 266 (419)
++.++.+.+++.||.+.++|+-..-...+.+...+..+.+++.++.++++| .+ +|.++| .+.... ++.+.+.+
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG-~~--~v~~~~-~~~~~~~~~~~~~~~~l 152 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELG-VS--CMVQPS-LPRIENEDDAKVVSEIF 152 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHT-CS--EEEECC-CCCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcC-CC--EEEeCC-CCCCCCHHHHHHHHHHH
Confidence 566666677788999988864332122234444455677778888888888 33 444553 332122 22233333
Q ss_pred HHHHHhhCCCccCCCccEEEEcCcc
Q 045356 267 KDAIQTYFPNETAAGHLSVISEPGR 291 (419)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~li~EpGR 291 (419)
++.. ++..+. | +++.+|+-.
T Consensus 153 ~~l~-~~a~~~-G---v~l~lEn~~ 172 (305)
T 3obe_A 153 NRAG-EITKKA-G---ILWGYHNHS 172 (305)
T ss_dssp HHHH-HHHHTT-T---CEEEEECCS
T ss_pred HHHH-HHHHHc-C---CEEEEecCc
Confidence 3222 222222 3 889999754
No 55
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=72.53 E-value=41 Score=30.34 Aligned_cols=97 Identities=8% Similarity=-0.009 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEee-C--CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEE--eCCCCCC----CC
Q 045356 187 NPEEVAHLLGAAQASGLAVIGVAFHI-G--SEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLD--IGGGFAC----NP 257 (419)
Q Consensus 187 ~~ee~~~~l~~~~~~~l~l~Glh~H~-g--s~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ld--iGGG~~~----~~ 257 (419)
+.+++.++.+.+++.++.+.+.|.-. . -...+++...+.++.+++.++.+..+| .+ ++. +.+|++. ..
T Consensus 45 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG-~~--~v~~~~~~~~~~~~~~~~ 121 (294)
T 3vni_A 45 SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLD-VH--LIGGALYSYWPIDYTKTI 121 (294)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHT-CC--EEEESTTSCSSCCTTSCC
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhC-CC--eeeccccCCCCCcCCCCC
Confidence 55677777788888999998743211 1 112466666777888888999888988 43 343 5666642 12
Q ss_pred CHHHHHHHHHHHHHhh---CCCccCCCccEEEEcCc
Q 045356 258 GFHEAASIIKDAIQTY---FPNETAAGHLSVISEPG 290 (419)
Q Consensus 258 ~~~~~~~~i~~~l~~~---~~~~~~~~~~~li~EpG 290 (419)
+.++..+.+.+.+++. ..+. | +++.+||-
T Consensus 122 ~~~~~~~~~~~~l~~l~~~a~~~-G---v~l~lEn~ 153 (294)
T 3vni_A 122 DKKGDWERSVESVREVAKVAEAC-G---VDFCLEVL 153 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-T---CEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-C---CEEEEEec
Confidence 3333333333333322 2221 3 88999975
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=70.68 E-value=20 Score=32.17 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=52.1
Q ss_pred HHHHHHHHHhcCCeEEEEEEeeCCC-------CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHH
Q 045356 191 VAHLLGAAQASGLAVIGVAFHIGSE-------ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAA 263 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H~gs~-------~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~ 263 (419)
+.++.+.+++.|+.+.++|+..+.. ..+++...+.++.+++.++.++.+| . +.+.+..|.+...+.++..
T Consensus 50 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG-a--~~v~~~~g~~~~~~~~~~~ 126 (269)
T 3ngf_A 50 ADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALD-C--RTLHAMSGITEGLDRKACE 126 (269)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTT-C--CEEECCBCBCTTSCHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcC-C--CEEEEccCCCCCCCHHHHH
Confidence 3455555677899999888654310 1234444566777788888888888 3 3455544443323333333
Q ss_pred HHHHHHHHh---hCCCccCCCccEEEEcC
Q 045356 264 SIIKDAIQT---YFPNETAAGHLSVISEP 289 (419)
Q Consensus 264 ~~i~~~l~~---~~~~~~~~~~~~li~Ep 289 (419)
+.+.+.|++ +..+. | +++.+||
T Consensus 127 ~~~~~~l~~l~~~a~~~-G---v~l~lE~ 151 (269)
T 3ngf_A 127 ETFIENFRYAADKLAPH-G---ITVLVEP 151 (269)
T ss_dssp HHHHHHHHHHHHHHGGG-T---CEEEECC
T ss_pred HHHHHHHHHHHHHHHHc-C---CEEEEee
Confidence 333333332 22222 3 8999997
No 57
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=70.42 E-value=22 Score=32.23 Aligned_cols=97 Identities=22% Similarity=0.300 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEEeeCCC-------------CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC
Q 045356 186 ANPEEVAHLLGAAQASGLAVIGVAFHIGSE-------------ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGG 252 (419)
Q Consensus 186 i~~ee~~~~l~~~~~~~l~l~Glh~H~gs~-------------~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG 252 (419)
++.+++.++.+.+++.+|.+..+++|+... ..+++...+.++.+++.++.++.+| .+ ++.+..|
T Consensus 48 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG-~~--~v~~~~G 124 (290)
T 3tva_A 48 RTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVG-CP--AIGLHIG 124 (290)
T ss_dssp CSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHT-CS--EEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEEcCC
Confidence 456777788888888999999988764211 1233444566778888888888888 43 4444444
Q ss_pred C-CCC--CCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 253 F-ACN--PGFHEAASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 253 ~-~~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
+ +.. ..++.+.+.+++.. ++..+. | +++.+|+.
T Consensus 125 ~~~~~~~~~~~~~~~~l~~l~-~~a~~~-G---v~l~lE~~ 160 (290)
T 3tva_A 125 FVPESSSPDYSELVRVTQDLL-THAANH-G---QAVHLETG 160 (290)
T ss_dssp CCCCTTSHHHHHHHHHHHHHH-HHHHTT-T---CEEEEECC
T ss_pred CCcccchHHHHHHHHHHHHHH-HHHHHc-C---CEEEEecC
Confidence 3 221 11223333333322 222222 3 88999996
No 58
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=69.20 E-value=18 Score=32.80 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcCCeEEEEEEe-------eCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEE-eCCCCCCCCCHHHH
Q 045356 191 VAHLLGAAQASGLAVIGVAFH-------IGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLD-IGGGFACNPGFHEA 262 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H-------~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ld-iGGG~~~~~~~~~~ 262 (419)
+.++.+.+++.++.+.++|+. ..-...+++...+.++.+++.++.++++| .+ ++. ...|.......++.
T Consensus 70 ~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG-~~--~v~~~~~g~~~~~~~~~~ 146 (290)
T 2zvr_A 70 WNEVKILSEELNLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFG-AL--VIIGLVRGRREGRSYEET 146 (290)
T ss_dssp HHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT-CE--EEESGGGCCCTTSCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEecCCCCCCCcCHHHH
Confidence 445555566789999998872 11122455556677888888899888888 33 333 21243222333444
Q ss_pred HHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 263 ASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 263 ~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
.+.+.+.+++..+.. -. +++.+|+-
T Consensus 147 ~~~~~~~l~~l~~~a--~~-v~l~lEn~ 171 (290)
T 2zvr_A 147 EELFIESMKRLLELT--EH-AKFVIEPL 171 (290)
T ss_dssp HHHHHHHHHHHHHHC--SS-CCEEECCC
T ss_pred HHHHHHHHHHHHHHh--cc-CEEEEEeC
Confidence 444444444433211 12 78899984
No 59
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=66.72 E-value=30 Score=32.24 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCeEEEEEEeeC-------CC-CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC---CC--CC
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHIG-------SE-ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGG---FA--CN 256 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~g-------s~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG---~~--~~ 256 (419)
++.++.+.+++.|+.+..++.+.. +- ..+++.....++.+++.++.++++| .+. +.+-+| +. ..
T Consensus 62 ~~~~l~~~l~~~Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LG-a~~--vv~~~g~~g~~~~~~ 138 (333)
T 3ktc_A 62 TLSEVKDALKDAGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELMHESAGIVRELG-ANY--VKVWPGQDGWDYPFQ 138 (333)
T ss_dssp CHHHHHHHHHHHTCEEEEEEECTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT-CSE--EEECCTTCEESSTTS
T ss_pred HHHHHHHHHHHcCCeEEEEecCcCcccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhC-CCE--EEECCCCCCcCCCCc
Confidence 344555556678999998887532 11 2456666778888888999889988 443 344444 21 11
Q ss_pred CCHHHHHHHHHHHHHhhCCCccCCCccEEEEc
Q 045356 257 PGFHEAASIIKDAIQTYFPNETAAGHLSVISE 288 (419)
Q Consensus 257 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~E 288 (419)
.+.++..+.+.+.|++..... ....+.+|
T Consensus 139 ~~~~~~~~~~~~~l~~l~~~a---~~~~i~lE 167 (333)
T 3ktc_A 139 VSHKNLWKLAVDGMRDLAGAN---PDVKFAIE 167 (333)
T ss_dssp SCHHHHHHHHHHHHHHHHHTC---TTSEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHh---hcCCEEEE
Confidence 234444444444444433221 12556666
No 60
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=66.38 E-value=87 Score=29.36 Aligned_cols=134 Identities=17% Similarity=0.191 Sum_probs=76.0
Q ss_pred cEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 045356 99 NFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGARY 178 (419)
Q Consensus 99 g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~ 178 (419)
|.|++++.|++ ++|.. .++..++..+.++.+.+.|++. |.||+..+.
T Consensus 6 G~d~s~~~~~e---~~g~~----~~~~~G~~~d~~~ilk~~G~N~--------------------VRi~~w~~P------ 52 (332)
T 1hjs_A 6 GVDWSSVVVEE---RAGVS----YKNTNGNAQPLENILAANGVNT--------------------VRQRVWVNP------ 52 (332)
T ss_dssp EEECTTHHHHH---HTTCC----CBCTTSCBCCHHHHHHHTTCCE--------------------EEEEECSSC------
T ss_pred eeeHHHHHHHH---HcCCE----EECCCCCcccHHHHHHHCCCCE--------------------EEEeeeeCC------
Confidence 88999988865 45642 2332223334566666778775 234443211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeC-------CCC------CCHHHHH-HHHHHHHHHHHHHHHcCCCcc
Q 045356 179 PLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIG-------SEA------TNLDAFH-AAIAEAKTVFETAARLGMTKM 244 (419)
Q Consensus 179 ~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~g-------s~~------~~~~~~~-~~~~~~~~l~~~l~~~g~~~~ 244 (419)
..-..+.+.+.++++.+++.|+++. +-+|.+ ++. .+.+.+. +..+...++++.+++.+ ..+
T Consensus 53 ---~~g~~~~~~~~~~~~~A~~~GlkV~-ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g-~~~ 127 (332)
T 1hjs_A 53 ---ADGNYNLDYNIAIAKRAKAAGLGVY-IDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAG-IQP 127 (332)
T ss_dssp ---TTCTTSHHHHHHHHHHHHHTTCEEE-EEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred ---CCCcCCHHHHHHHHHHHHHCCCEEE-EEeccCCCcCCccccCCccccccchHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 1112356788888888888998765 456752 111 0223332 33455566777788777 677
Q ss_pred eEEEeCCCCCC--------CCCHHHHHHHHHHHH
Q 045356 245 RVLDIGGGFAC--------NPGFHEAASIIKDAI 270 (419)
Q Consensus 245 ~~ldiGGG~~~--------~~~~~~~~~~i~~~l 270 (419)
.++.+|--+.. ..+++.+.+.++.+.
T Consensus 128 ~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~ 161 (332)
T 1hjs_A 128 TIVSIGNEIRAGLLWPTGRTENWANIARLLHSAA 161 (332)
T ss_dssp SEEEESSSGGGEETBTTEETTCHHHHHHHHHHHH
T ss_pred CEEEEeecccccccCcCCCccCHHHHHHHHHHHH
Confidence 88877754321 124566666555544
No 61
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=66.15 E-value=22 Score=31.46 Aligned_cols=63 Identities=10% Similarity=0.060 Sum_probs=47.2
Q ss_pred EEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCC------cE-EEecCHHHHHHHHhHCCCCeEEEEEec
Q 045356 101 DCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGV------NL-TTFDSIQELDKIRKWHPKCELLIRIKS 170 (419)
Q Consensus 101 ~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi------~~-i~vdS~~el~~i~~~~~~~~v~lRv~~ 170 (419)
.|-+.++++.+.++|- +++++ |..+++-++.+.++|+ .. .-+.+.+|+....+.+.+. |++.+
T Consensus 71 TVlt~~~a~~ai~AGA---~fivs-P~~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~---vK~FP 140 (217)
T 3lab_A 71 TVCTADDFQKAIDAGA---QFIVS-PGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQ---LKCFP 140 (217)
T ss_dssp CCCSHHHHHHHHHHTC---SEEEE-SSCCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCE---EEETT
T ss_pred cccCHHHHHHHHHcCC---CEEEe-CCCcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCE---EEECc
Confidence 5668899999999984 56765 6678888888888877 54 3788999999887776442 46665
No 62
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=65.23 E-value=71 Score=30.56 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=7.5
Q ss_pred EcCHHHHHHHHHCCC
Q 045356 102 CASPSEIQAVLALSV 116 (419)
Q Consensus 102 VaS~~E~~~a~~~G~ 116 (419)
|.|.+|++.+.++|.
T Consensus 157 v~t~e~A~~a~~aGA 171 (366)
T 4fo4_A 157 VATAEGARALIEAGV 171 (366)
T ss_dssp ECSHHHHHHHHHHTC
T ss_pred eCCHHHHHHHHHcCC
Confidence 445555555555544
No 63
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=64.90 E-value=21 Score=32.29 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIGSE--ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGF 253 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~gs~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~ 253 (419)
+++.++.+.+++.++.+.++|...... ..+++...+.++.+.+.++.+..+| .+ ++.+..|+
T Consensus 64 ~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG-a~--~v~~~~g~ 127 (287)
T 3kws_A 64 GRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELG-ST--GVIIVPAF 127 (287)
T ss_dssp GGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTT-CS--EEEECSCC
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEEecCc
Confidence 345666666677899998886532212 2466666777888888999888888 44 44444444
No 64
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=64.88 E-value=54 Score=30.50 Aligned_cols=13 Identities=38% Similarity=0.534 Sum_probs=6.0
Q ss_pred CHHHHHHHHHHHH
Q 045356 187 NPEEVAHLLGAAQ 199 (419)
Q Consensus 187 ~~ee~~~~l~~~~ 199 (419)
.|+++.++++.++
T Consensus 184 ~P~~v~~lv~~l~ 196 (307)
T 1ydo_A 184 NPAQVETVLEALL 196 (307)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4444444444443
No 65
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.55 E-value=41 Score=31.08 Aligned_cols=140 Identities=18% Similarity=0.218 Sum_probs=70.8
Q ss_pred EeHHHHHHHHHHHHHh-CCCCceee--eeccCC---c-HHHHHHHHHc-CC--cEEEcCHHHHHHHHHCCCCCCcEEEcC
Q 045356 56 LDLGVVISLYHQLISN-LPMVHPYY--AVKCNP---E-PAILETLAAL-GS--NFDCASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 56 ~d~~~l~~ni~~~~~~-~~~~~i~~--avKan~---~-~~v~~~l~~~-G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++.+...+-++++.+. ++.+++-+ +-|.-+ . ..+++.+.+. +. ..-+.+...++.+.++|++ .|.+..
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~ag~~--~v~i~~ 101 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAK--EVVIFG 101 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEECCSHHHHHHHHHTTCS--EEEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEcCCHHhHHHHHHCCCC--EEEEEe
Confidence 5666666666666554 23333332 111111 1 3455555443 42 4446788889999999884 344433
Q ss_pred CCCCHH-------------------HHHHHHHCCCcEE-E----e-------cCHHHHHHHHhHCC--CCeEEEEEecCC
Q 045356 126 ACKPVS-------------------HIKYAASVGVNLT-T----F-------DSIQELDKIRKWHP--KCELLIRIKSPV 172 (419)
Q Consensus 126 p~k~~~-------------------~l~~a~~~gi~~i-~----v-------dS~~el~~i~~~~~--~~~v~lRv~~~~ 172 (419)
+. ++. -++.+.+.|..+. . + .+.+++..+.+... ... .|++.-
T Consensus 102 ~~-sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~-~i~l~D-- 177 (298)
T 2cw6_A 102 AA-SELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCY-EISLGD-- 177 (298)
T ss_dssp ES-CHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCS-EEEEEE--
T ss_pred cC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC-EEEecC--
Confidence 32 221 2455556676421 1 1 15566555544311 111 122221
Q ss_pred CCCCCCCCCCCCC-CCHHHHHHHHHHHHh-c-CCeEEEEEEee
Q 045356 173 DGGARYPLDSKFG-ANPEEVAHLLGAAQA-S-GLAVIGVAFHI 212 (419)
Q Consensus 173 ~~g~~~~~~sRfG-i~~ee~~~~l~~~~~-~-~l~l~Glh~H~ 212 (419)
+ .| ..|+++.++++.+++ . ++ ..|+|+|-
T Consensus 178 -------T---~G~~~P~~~~~lv~~l~~~~~~~-~i~~H~Hn 209 (298)
T 2cw6_A 178 -------T---IGVGTPGIMKDMLSAVMQEVPLA-ALAVHCHD 209 (298)
T ss_dssp -------T---TSCCCHHHHHHHHHHHHHHSCGG-GEEEEEBC
T ss_pred -------C---CCCcCHHHHHHHHHHHHHhCCCC-eEEEEECC
Confidence 1 12 478888888887765 2 34 35788884
No 66
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=63.99 E-value=61 Score=28.65 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHH-HHHHHH
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA-ASIIKD 268 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~-~~~i~~ 268 (419)
++.++.+.+++.++.+.++|+...-...+. +..+.+++.++.++++| .+ ++.+.+|......++.+ .+.+++
T Consensus 52 ~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~----~~~~~~~~~i~~a~~lG-~~--~v~~~~g~~~~~~~~~~~~~~l~~ 124 (272)
T 2q02_A 52 NYNQVRNLAEKYGLEIVTINAVYPFNQLTE----EVVKKTEGLLRDAQGVG-AR--ALVLCPLNDGTIVPPEVTVEAIKR 124 (272)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEETTTTSCCH----HHHHHHHHHHHHHHHHT-CS--EEEECCCCSSBCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCeEEechhhhccCCcHH----HHHHHHHHHHHHHHHhC-CC--EEEEccCCCchhHHHHHHHHHHHH
Confidence 345555566778999999987643322232 23455667777788887 33 34444444322334555 555554
Q ss_pred HHHhhCCCccCCCccEEEEcCcc
Q 045356 269 AIQTYFPNETAAGHLSVISEPGR 291 (419)
Q Consensus 269 ~l~~~~~~~~~~~~~~li~EpGR 291 (419)
.. ++..+. | +++.+|+-.
T Consensus 125 l~-~~a~~~-g---v~l~~E~~~ 142 (272)
T 2q02_A 125 LS-DLFARY-D---IQGLVEPLG 142 (272)
T ss_dssp HH-HHHHTT-T---CEEEECCCC
T ss_pred HH-HHHHHc-C---CEEEEEecC
Confidence 33 222222 3 889999864
No 67
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=63.89 E-value=23 Score=31.31 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=51.4
Q ss_pred HHHHHHHHhcCCeEEEEEEeeCC-------CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC-CCCCCHHHHH
Q 045356 192 AHLLGAAQASGLAVIGVAFHIGS-------EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGF-ACNPGFHEAA 263 (419)
Q Consensus 192 ~~~l~~~~~~~l~l~Glh~H~gs-------~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~-~~~~~~~~~~ 263 (419)
.++.+.+++.++.+.++|+..+. ...+++...+.++.+++.++.++++| . +++.+..|. +...+.++..
T Consensus 43 ~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG-~--~~v~~~~g~~~~~~~~~~~~ 119 (260)
T 1k77_A 43 LQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALN-C--EQVHVMAGVVPAGEDAERYR 119 (260)
T ss_dssp HHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTT-C--SEEECCCCBCCTTSCHHHHH
T ss_pred HHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcC-C--CEEEECcCCCCCCCCHHHHH
Confidence 34455566789999998875421 11234444566777888888888888 3 345554443 2222333332
Q ss_pred HHHHHHHH---hhCCCccCCCccEEEEcCc
Q 045356 264 SIIKDAIQ---TYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 264 ~~i~~~l~---~~~~~~~~~~~~~li~EpG 290 (419)
+.+.+.++ ++..+. | +++.+||-
T Consensus 120 ~~~~~~l~~l~~~a~~~-g---v~l~~E~~ 145 (260)
T 1k77_A 120 AVFIDNIRYAADRFAPH-G---KRILVEAL 145 (260)
T ss_dssp HHHHHHHHHHHHHHGGG-T---CEEEECCC
T ss_pred HHHHHHHHHHHHHHHHc-C---CEEEEEeC
Confidence 33333332 223222 3 88999986
No 68
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=62.40 E-value=1.2e+02 Score=29.61 Aligned_cols=66 Identities=11% Similarity=0.032 Sum_probs=35.6
Q ss_pred CcEEEEeHHHHHHHHHHHHHh-CCCCceeeeeccCCc-HHHHHHHHHcCCc-----EEEcCHHHHHHHHHCCCC
Q 045356 51 EPFYVLDLGVVISLYHQLISN-LPMVHPYYAVKCNPE-PAILETLAALGSN-----FDCASPSEIQAVLALSVS 117 (419)
Q Consensus 51 tP~~v~d~~~l~~ni~~~~~~-~~~~~i~~avKan~~-~~v~~~l~~~G~g-----~~VaS~~E~~~a~~~G~~ 117 (419)
+|-..++.+.-.+-++++-+. ++.+++-++ ++++. ...++.+.+.+.. ...+....++.+.++|++
T Consensus 53 ~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P-~asp~d~~~~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~ 125 (423)
T 3ivs_A 53 FANAFFDTEKKIQIAKALDNFGVDYIELTSP-VASEQSRQDCEAICKLGLKCKILTHIRCHMDDARVAVETGVD 125 (423)
T ss_dssp STTCCCCHHHHHHHHHHHHHHTCSEEEECCT-TSCHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCS
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEEeec-ccCHHHHHHHHHHHhcCCCCEEEEeeccChhhHHHHHHcCCC
Confidence 333445666666666665543 233344332 33332 3456666665532 234667788888888874
No 69
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=60.19 E-value=86 Score=30.09 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHh---cCCeEEEEEEee
Q 045356 186 ANPEEVAHLLGAAQA---SGLAVIGVAFHI 212 (419)
Q Consensus 186 i~~ee~~~~l~~~~~---~~l~l~Glh~H~ 212 (419)
..|.++.++++.+++ .++ ..|+|+|-
T Consensus 170 ~~P~~~~~lv~~l~~~~~~~~-~i~~H~Hn 198 (382)
T 2ztj_A 170 ATPRQVYALVREVRRVVGPRV-DIEFHGHN 198 (382)
T ss_dssp CCHHHHHHHHHHHHHHHTTTS-EEEEEEBC
T ss_pred CCHHHHHHHHHHHHHhcCCCC-eEEEEeCC
Confidence 478888888887764 344 46888884
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=59.51 E-value=48 Score=31.50 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEcC---------------------HHHHHHHHH-CCC
Q 045356 60 VVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCAS---------------------PSEIQAVLA-LSV 116 (419)
Q Consensus 60 ~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS---------------------~~E~~~a~~-~G~ 116 (419)
.+.+.++++++.+|+..+. +|.-.+++.++.+.+.|+ .+.|+. +.|+..+.+ .++
T Consensus 147 ~~~~~i~~lr~~~~~~~vi--~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~i 224 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIM--AGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKG 224 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCeEE--EEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 3455566666665433322 344445566666666666 444431 122222221 122
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 117 SPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
.++..|.+.+..++..|+..|...+.+.+
T Consensus 225 ---pvIa~GGI~~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 225 ---HIISDGGCSCPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp ---EEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCceeccH
Confidence 35555666666666666666665444443
No 71
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=58.81 E-value=88 Score=28.35 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEeeCC--C--CCC-HHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHH
Q 045356 188 PEEVAHLLGAAQASGLAVIGVAFHIGS--E--ATN-LDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEA 262 (419)
Q Consensus 188 ~ee~~~~l~~~~~~~l~l~Glh~H~gs--~--~~~-~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~ 262 (419)
.+++.++.+.+++.++... .+|... + ..+ ++...+.++.+++.++.++.+| .+.-+++.|.. ...+.++.
T Consensus 52 ~~~~~~~~~~l~~~gl~~~--~~h~~~~~nl~s~d~~~~r~~~~~~~~~~i~~A~~lG-a~~vv~h~g~~--~~~~~~~~ 126 (303)
T 3aal_A 52 ELNIEAGRQHMQAHGIEEI--VVHAPYIINIGNTTNLDTFSLGVDFLRAEIERTEAIG-AKQLVLHPGAH--VGAGVEAG 126 (303)
T ss_dssp GGCHHHHHHHHHHTTCCEE--EEECCTTCCTTCSSCHHHHHHHHHHHHHHHHHHHHHT-CSEEEECCEEC--TTSCHHHH
T ss_pred HHHHHHHHHHHHHcCCceE--EEeccccccCCCCCcHHHHHHHHHHHHHHHHHHHHcC-CCEEEECCCcC--CCCCHHHH
Confidence 4556666666777888433 345321 1 234 6666778888888888888888 44333333322 22244555
Q ss_pred HHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 263 ASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 263 ~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
.+.+.+.+++..... ..++|.+|+-
T Consensus 127 ~~~~~~~l~~l~~~a---~gv~l~lEn~ 151 (303)
T 3aal_A 127 LRQIIRGLNEVLTRE---QNVQIALETM 151 (303)
T ss_dssp HHHHHHHHHHHCCSS---CSCEEEEECC
T ss_pred HHHHHHHHHHHHHhC---CCCEEEEecC
Confidence 556666666655431 2389999974
No 72
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=58.53 E-value=1.2e+02 Score=30.43 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=56.8
Q ss_pred CCcEEEEe-----HHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEE------------------cC-
Q 045356 50 DEPFYVLD-----LGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDC------------------AS- 104 (419)
Q Consensus 50 ~tP~~v~d-----~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~V------------------aS- 104 (419)
+-..+++| ...+.+.++++++.+|+..+. ++.-...+.++.+.+.|+ ++.| .+
T Consensus 268 Gvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi--~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~ 345 (511)
T 3usb_A 268 SVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNII--AGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQL 345 (511)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHH
T ss_pred ccceEEecccccchhhhhhHHHHHHHhCCCceEE--eeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcH
Confidence 44456663 445667777888777654333 444456677777777777 4543 01
Q ss_pred --HHHHHHHHH-CCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 105 --PSEIQAVLA-LSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 105 --~~E~~~a~~-~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
+.|+..+.+ .++ .++..|++.+..++..|+..|+..+.+.+
T Consensus 346 ~~l~~v~~~~~~~~i---PVIa~GGI~~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 346 TAVYDCATEARKHGI---PVIADGGIKYSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp HHHHHHHHHHHTTTC---CEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHHHHHhCCC---cEEEeCCCCCHHHHHHHHHhCchhheecH
Confidence 223222222 243 47777777888888888888877666665
No 73
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=57.67 E-value=74 Score=30.41 Aligned_cols=15 Identities=7% Similarity=-0.004 Sum_probs=7.6
Q ss_pred EcCHHHHHHHHHCCC
Q 045356 102 CASPSEIQAVLALSV 116 (419)
Q Consensus 102 VaS~~E~~~a~~~G~ 116 (419)
|.|+++++.+.++|.
T Consensus 149 V~T~e~A~~a~~aGa 163 (361)
T 3r2g_A 149 VATYAGADYLASCGA 163 (361)
T ss_dssp ECSHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 445555555555554
No 74
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=56.46 E-value=39 Score=32.34 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeC--------C-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIG--------S-EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGG 252 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~g--------s-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG 252 (419)
+++.++.+.+++.++.+..+|.... . ...+.+.....++.+++.++.++++| .+ .+.+.+|
T Consensus 69 ~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LG-a~--~vv~~~G 138 (387)
T 1bxb_A 69 QIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELG-AE--IYVVWPG 138 (387)
T ss_dssp HHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHT-CC--EEEECCT
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC-CC--EEEECCC
Confidence 4566666667778999988875432 1 12355556677888888888888888 43 4455555
No 75
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=56.37 E-value=56 Score=29.09 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=62.1
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEE----c-CHHHHHHHHHCCCCCCcEEE
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDC----A-SPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~V----a-S~~E~~~a~~~G~~~~~Ii~ 123 (419)
...+++.+.+ .+.++++++..|+..+.+.+..... ..+.+.+.|+ ++.+ . +..-++.+++.|+. -..|
T Consensus 127 ~~~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G~~--v~~w 200 (248)
T 1zcc_A 127 VRDTFYFSFS--EEMRQGLQSIAPEFRRMMTLDIAKS--PSLVGAVHHASIIEITPAQMRRPGIIEASRKAGLE--IMVY 200 (248)
T ss_dssp STTEEEECSC--HHHHHHHHHHCTTSEEEEEHHHHSS--THHHHHTTCCSEEEECHHHHHSHHHHHHHHHHTCE--EEEE
T ss_pred CCCEEEEECC--HHHHHHHHHHCCCCcEEEEecCCcc--HHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCCCE--EEEE
Confidence 3455554432 2234566666787776666543332 2344555665 3333 2 55666778888873 3445
Q ss_pred cCCCCCHHHHHH-HHHCCCcEEEecCHHHHHHHHh
Q 045356 124 ANACKPVSHIKY-AASVGVNLTTFDSIQELDKIRK 157 (419)
Q Consensus 124 ~gp~k~~~~l~~-a~~~gi~~i~vdS~~el~~i~~ 157 (419)
+ ..++++++. +++.|+.-+..|..+.+..+.+
T Consensus 201 T--vn~~~~~~~~l~~~GvdgIiTD~p~~~~~~~~ 233 (248)
T 1zcc_A 201 Y--GGDDMAVHREIATSDVDYINLDRPDLFAAVRS 233 (248)
T ss_dssp C--CCCCHHHHHHHHHSSCSEEEESCHHHHHHHHH
T ss_pred C--CCCHHHHHHHHHHcCCCEEEECCHHHHHHHHH
Confidence 4 345688888 9999998788899988877654
No 76
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=56.07 E-value=58 Score=30.52 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=62.0
Q ss_pred HHHHHHCC-CCCCcEEEcCCCC---CHHHHHHHHHCCCcEEEecCHHH------HHHHHhHC--CCCeEEEEEecCCCCC
Q 045356 108 IQAVLALS-VSPDRIIYANACK---PVSHIKYAASVGVNLTTFDSIQE------LDKIRKWH--PKCELLIRIKSPVDGG 175 (419)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~k---~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~--~~~~v~lRv~~~~~~g 175 (419)
+..+.+.| +.+.+++..|.-. ++++.+.+-+.|+..+..+.+.+ ++++.+.. ....+.|-++.+.-..
T Consensus 172 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~~~vylSiDiDvLDp 251 (322)
T 3m1r_A 172 FRRLLDEEIIEGQHLIQLGIREFSNSQAYEAYAKKHNVNIHTMDMIREKGLIPTIKEILPVVQDKTDFIFISVDMDVLDQ 251 (322)
T ss_dssp HHHHHHTTSSCGGGEEEEEECTTSSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGBCT
T ss_pred HHHHHhccCCCCceEEEEeeCCCCCCHHHHHHHHHCCCEEEEHHHHhhcCHHHHHHHHHHHhhccCCeEEEEEeecccCh
Confidence 34445544 4556788776543 67888888889987655554433 22222221 1236788777764211
Q ss_pred CC---CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 176 AR---YPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 176 ~~---~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
+. ..+....|++..|+.++++.+... -++.|+..-
T Consensus 252 a~aPgtgtp~pgGlt~~e~~~il~~l~~~-~~vvg~Div 289 (322)
T 3m1r_A 252 SHAPGCPAIGPGGLYTDELLEAVKYIAQQ-PNVAGIEIV 289 (322)
T ss_dssp TTCTTSSSCCSSCBCHHHHHHHHHHHHTS-TTEEEEEEE
T ss_pred hhCCCCCCCCCCCCCHHHHHHHHHHHhcc-CCEEEEEEE
Confidence 11 223468999999999999887643 356776654
No 77
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=55.65 E-value=92 Score=28.73 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=61.6
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCc--------------------HHHHHHHHHcCC-cEE----EcC
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPE--------------------PAILETLAALGS-NFD----CAS 104 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~--------------------~~v~~~l~~~G~-g~~----VaS 104 (419)
....++.+.+ .+.++++++..|++.+.+.+..... ..+.+.+.+.|+ .+. ..+
T Consensus 180 ~~~v~i~SF~--~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 257 (313)
T 3l12_A 180 EPRTVMHSFD--WALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDVT 257 (313)
T ss_dssp GGGEEEEESC--HHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGCC
T ss_pred CCCEEEEcCC--HHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcEEecchhcCC
Confidence 3445554433 2334556666777666665544321 012344445553 332 346
Q ss_pred HHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHh
Q 045356 105 PSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRK 157 (419)
Q Consensus 105 ~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~ 157 (419)
..-++.+++.|+. -..|+ ..++++++.+++.|+.-|..|..+.+..+.+
T Consensus 258 ~~~v~~~~~~Gl~--V~~WT--Vn~~~~~~~l~~~GVDgIiTD~P~~~~~~l~ 306 (313)
T 3l12_A 258 PELVAEAHDLGLI--VLTWT--VNEPEDIRRMATTGVDGIVTDYPGRTQRILI 306 (313)
T ss_dssp HHHHHHHHHTTCE--EEEBC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHCCCE--EEEEc--CCCHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 7778888888872 33444 4578889999999988778888888887654
No 78
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=55.23 E-value=27 Score=31.21 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 191 VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
+.++.+.+++.++.+.++++...- ....+.+++.++.+++.++.++.+|
T Consensus 49 ~~~~~~~l~~~gl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~A~~lG 97 (281)
T 3u0h_A 49 DAAVEAMFQRRGLVLANLGLPLNL-YDSEPVFLRELSLLPDRARLCARLG 97 (281)
T ss_dssp HHHHHHHHHTTTCEECCEECCSCT-TSCHHHHHHHHHTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCceEEecccccc-cCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 455566667789999887765321 1223345666778888888888888
No 79
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=55.22 E-value=45 Score=31.99 Aligned_cols=52 Identities=21% Similarity=0.185 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeC--------C-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIG--------S-EATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~g--------s-~~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
+++.++.+.+++.+|.+..++.... . ...+.+.....++.+++.++.++++|
T Consensus 69 ~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd~~~r~~~i~~~~~~i~~A~~LG 129 (393)
T 1xim_A 69 GIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELG 129 (393)
T ss_dssp HHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4566666667778999988876431 1 12455556777888888899888988
No 80
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=54.54 E-value=1.7e+02 Score=29.03 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=49.7
Q ss_pred CCcEEEEe-----HHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEc----C---------------
Q 045356 50 DEPFYVLD-----LGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCA----S--------------- 104 (419)
Q Consensus 50 ~tP~~v~d-----~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~Va----S--------------- 104 (419)
+-.++++| ...+.+.++++++.+|+..+. ++.-...+.++.+.+.|+ .+.|. |
T Consensus 241 G~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi--~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~ 318 (490)
T 4avf_A 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVI--GGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQI 318 (490)
T ss_dssp TCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHH
T ss_pred ccceEEecccCCcchhHHHHHHHHHHHCCCceEE--EeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHH
Confidence 34455554 345556677777766653332 233345566666777776 44441 1
Q ss_pred --HHHHHHHH-HCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 105 --PSEIQAVL-ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 105 --~~E~~~a~-~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
+.|+..+. +.++ .++-.|.+.+..++..|+..|+..+.+.+
T Consensus 319 ~~l~~v~~~~~~~~i---PVIa~GGI~~~~di~kal~~GAd~V~vGs 362 (490)
T 4avf_A 319 SAIANVAAALEGTGV---PLIADGGIRFSGDLAKAMVAGAYCVMMGS 362 (490)
T ss_dssp HHHHHHHHHHTTTTC---CEEEESCCCSHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHhccCCC---cEEEeCCCCCHHHHHHHHHcCCCeeeecH
Confidence 12222222 1132 36666666677777777766666555554
No 81
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=54.20 E-value=72 Score=32.27 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHHHHh-c--CCeEEEEEEee
Q 045356 186 ANPEEVAHLLGAAQA-S--GLAVIGVAFHI 212 (419)
Q Consensus 186 i~~ee~~~~l~~~~~-~--~l~l~Glh~H~ 212 (419)
..|.++.++++.+++ . ++ ..|+|+|-
T Consensus 201 ~~P~~v~~lv~~l~~~~p~~i-~I~~H~Hn 229 (539)
T 1rqb_A 201 LKPQPAYDIIKAIKDTYGQKT-QINLHCHS 229 (539)
T ss_dssp CCHHHHHHHHHHHHHHHCTTC-CEEEEEBC
T ss_pred cCHHHHHHHHHHHHHhcCCCc-eEEEEeCC
Confidence 467888888887754 2 44 45888884
No 82
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=53.95 E-value=34 Score=32.88 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=22.6
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
.|+..|.+.+.++...+++.|+..+.+.+
T Consensus 300 pvI~~GGI~s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 300 PIIGVGGVSSGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp CEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred eEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 57778888888888888888887666654
No 83
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=53.52 E-value=1.2e+02 Score=26.89 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=57.7
Q ss_pred HHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEE----EcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCC
Q 045356 66 HQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFD----CASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVG 140 (419)
Q Consensus 66 ~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~----VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~g 140 (419)
+++++..|++...|.+...+. ...+.+...|+ ++. ..+..-++.+++.|+. -..|+ ..++++++.+++.|
T Consensus 157 ~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~--v~~WT--vn~~~~~~~l~~~G 231 (252)
T 3qvq_A 157 VSAKALWPEIARGYNVSAIPS-AWQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGYK--VLAFT--INDESLALKLYNQG 231 (252)
T ss_dssp HHHHHHCTTSCEEEECSSCCT-THHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCE--EEEEC--CCCHHHHHHHHHTT
T ss_pred HHHHHHCCCCcEEEEEecCch-hHHHHHHHcCCeEEecchhhCCHHHHHHHHHCCCE--EEEEc--CCCHHHHHHHHHcC
Confidence 455666777777776654332 12334445554 333 3566777888888873 34554 35788999999999
Q ss_pred CcEEEecCHHHHHHHHh
Q 045356 141 VNLTTFDSIQELDKIRK 157 (419)
Q Consensus 141 i~~i~vdS~~el~~i~~ 157 (419)
+.-|.-|..+.+..+.+
T Consensus 232 VdgIiTD~P~~~~~~l~ 248 (252)
T 3qvq_A 232 LDAVFSDYPQKIQSAID 248 (252)
T ss_dssp CCEEEESSHHHHHHHHH
T ss_pred CCEEEeCCHHHHHHHHH
Confidence 98888899988887654
No 84
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=51.72 E-value=81 Score=28.10 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHhhcCCCCCcEEEEeHH--HHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCcEEEcC---HHH
Q 045356 33 GGLLEFMESIILKRQELDEPFYVLDLG--VVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGSNFDCAS---PSE 107 (419)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~tP~~v~d~~--~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~VaS---~~E 107 (419)
+...++.+.++ +-+-+.+.+... .-.+.++++++.+|+..+-+- +--...-++...+.|+.|-|+- .+=
T Consensus 46 ~~a~~~a~al~----~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaG--TVlt~~~a~~Ai~AGA~fIvsP~~~~~v 119 (232)
T 4e38_A 46 EDIIPLGKVLA----ENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAG--TILNGEQALAAKEAGATFVVSPGFNPNT 119 (232)
T ss_dssp GGHHHHHHHHH----HTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEE--CCCSHHHHHHHHHHTCSEEECSSCCHHH
T ss_pred HHHHHHHHHHH----HCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeEC--CcCCHHHHHHHHHcCCCEEEeCCCCHHH
Confidence 34555666555 346667776542 234666777777764322211 1223555666666776665532 222
Q ss_pred HHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEE
Q 045356 108 IQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLT 144 (419)
Q Consensus 108 ~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i 144 (419)
++.+++.|+ .++-| +.++.|+..|.+.|...+
T Consensus 120 i~~~~~~gi----~~ipG-v~TptEi~~A~~~Gad~v 151 (232)
T 4e38_A 120 VRACQEIGI----DIVPG-VNNPSTVEAALEMGLTTL 151 (232)
T ss_dssp HHHHHHHTC----EEECE-ECSHHHHHHHHHTTCCEE
T ss_pred HHHHHHcCC----CEEcC-CCCHHHHHHHHHcCCCEE
Confidence 233344443 22223 456777777777776643
No 85
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=50.47 E-value=63 Score=30.80 Aligned_cols=62 Identities=23% Similarity=0.282 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEee--------CC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHI--------GS-EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGF 253 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~--------gs-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~ 253 (419)
+++.++.+.+++.||.+..++... |. ...+.+...+.++.+.+.++.++.+| .+ .+.+.+|.
T Consensus 69 ~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LG-a~--~vvv~~g~ 139 (386)
T 1muw_A 69 SHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELG-AK--TYVAWGGR 139 (386)
T ss_dssp HHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHT-CS--EEEECCTT
T ss_pred HHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhC-CC--EEEECCCC
Confidence 345566666777899998887632 11 12355556677888888999899988 44 45555444
No 86
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=50.44 E-value=1.4e+02 Score=26.55 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=65.3
Q ss_pred CHHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccC----CcHHHHHHHHHcCCc-EE----EcC
Q 045356 34 GLLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCN----PEPAILETLAALGSN-FD----CAS 104 (419)
Q Consensus 34 ~~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan----~~~~v~~~l~~~G~g-~~----VaS 104 (419)
.+.+.+.+.+... ......++.+.+ .+.++++++..|..++.+..... ....+++.+...|+. +. ..+
T Consensus 117 ~~~~~v~~~l~~~-~~~~~v~~~SF~--~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (250)
T 3ks6_A 117 GFVALVIAGLERH-SMLERTTFSSFL--LASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTAD 193 (250)
T ss_dssp THHHHHHHHHHHT-TCGGGEEEEESC--HHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCC
T ss_pred HHHHHHHHHHHhc-CCCCCEEEEeCC--HHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCC
Confidence 3444444444442 333455553332 12334566667776665544311 011244444555642 22 246
Q ss_pred HHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHh
Q 045356 105 PSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRK 157 (419)
Q Consensus 105 ~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~ 157 (419)
..-+..+.+.|+. -..|+ ..++++++.+++.|+.-|..|..+.+..+.+
T Consensus 194 ~~~v~~~~~~G~~--V~~WT--vn~~~~~~~l~~~GVDgIiTD~P~~~~~~~~ 242 (250)
T 3ks6_A 194 AGLMAQVQAAGLD--FGCWA--AHTPSQITKALDLGVKVFTTDRPTLAIALRT 242 (250)
T ss_dssp HHHHHHHHHTTCE--EEEEC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHCCCE--EEEEe--CCCHHHHHHHHHcCCCEEEcCCHHHHHHHHH
Confidence 6777778888862 34453 3467888888888888778888888777654
No 87
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=50.33 E-value=1.1e+02 Score=27.72 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=49.5
Q ss_pred HHHHHHHHhcCCeEEEEEEeeCCC-CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHHHHHHHHHHHH
Q 045356 192 AHLLGAAQASGLAVIGVAFHIGSE-ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFHEAASIIKDAI 270 (419)
Q Consensus 192 ~~~l~~~~~~~l~l~Glh~H~gs~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~~~~~~i~~~l 270 (419)
.++.+.+++.+|.+..++.. +.. ..++... +..+.+.+.++.++++| .+ .+.+|.+ + ..+++.+.+.+++..
T Consensus 71 ~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~A~~lG-a~--~v~~g~~-~-~~~~~~~~~~l~~l~ 143 (296)
T 2g0w_A 71 EDMLRILDEHNMKVTEVEYI-TQWGTAEDRTA-EQQKKEQTTFHMARLFG-VK--HINCGLL-E-KIPEEQIIVALGELC 143 (296)
T ss_dssp HHHHHHHHHTTCEEEEEECB-CCCSSTTTCCH-HHHHHHHHHHHHHHHHT-CC--EEEECCC-S-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEeehhh-hccccCChHHH-HHHHHHHHHHHHHHHcC-CC--EEEEcCC-C-CCCHHHHHHHHHHHH
Confidence 44555566789999888763 221 1122222 23566677778788887 33 4555543 2 234566666666554
Q ss_pred HhhCCCccCCCccEEEEcCcc
Q 045356 271 QTYFPNETAAGHLSVISEPGR 291 (419)
Q Consensus 271 ~~~~~~~~~~~~~~li~EpGR 291 (419)
... . | +++.+|+-.
T Consensus 144 ~~a--~--G---v~l~lE~~~ 157 (296)
T 2g0w_A 144 DRA--E--E---LIIGLEFMP 157 (296)
T ss_dssp HHH--T--T---SEEEEECCT
T ss_pred HHh--c--C---CEEEEEecC
Confidence 443 1 3 889999853
No 88
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=50.14 E-value=51 Score=31.63 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhcCCeEEEEEEee--------CC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC
Q 045356 190 EVAHLLGAAQASGLAVIGVAFHI--------GS-EATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGF 253 (419)
Q Consensus 190 e~~~~l~~~~~~~l~l~Glh~H~--------gs-~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~ 253 (419)
.+.++.+.+++.||.+..++... +. ...+.+...+.++.+++.++.++++| .+ .+.+-+|.
T Consensus 70 ~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LG-a~--~vvv~~G~ 139 (394)
T 1xla_A 70 ILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMG-AE--TFVMWGGR 139 (394)
T ss_dssp HHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTT-CS--EEEECCTT
T ss_pred HHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHHHHHHHHHHHHHHHHHHHHhC-CC--EEEECCCC
Confidence 45556666677899998887632 11 12455666778888899999999998 44 34444443
No 89
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=50.07 E-value=45 Score=28.85 Aligned_cols=73 Identities=10% Similarity=0.109 Sum_probs=49.9
Q ss_pred EEEEeHHHHHHHHHHHHHhCCC-CceeeeeccCCcHHHHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHH
Q 045356 53 FYVLDLGVVISLYHQLISNLPM-VHPYYAVKCNPEPAILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPVS 131 (419)
Q Consensus 53 ~~v~d~~~l~~ni~~~~~~~~~-~~i~~avKan~~~~v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~ 131 (419)
+|++|-..+..-++.+++.-|+ +++++.+ .|.+++.+ .. ..+ -.|+-.|...+++
T Consensus 108 ~FliDS~al~~~~~~i~~~~PD~iEiLPGi----~p~iI~~i---------------~~--~~~---~PiIaGGlI~~~e 163 (192)
T 3kts_A 108 LFMIDSSAYNKGVALIQKVQPDCIELLPGI----IPEQVQKM---------------TQ--KLH---IPVIAGGLIETSE 163 (192)
T ss_dssp EECCSHHHHHHHHHHHHHHCCSEEEEECTT----CHHHHHHH---------------HH--HHC---CCEEEESSCCSHH
T ss_pred EEEEEcchHHHHHHHHhhcCCCEEEECCch----hHHHHHHH---------------HH--hcC---CCEEEECCcCCHH
Confidence 6899999999999999887776 5566331 23333322 11 123 2588888889999
Q ss_pred HHHHHHHCCCcEEEecCH
Q 045356 132 HIKYAASVGVNLTTFDSI 149 (419)
Q Consensus 132 ~l~~a~~~gi~~i~vdS~ 149 (419)
++..|++.|+..++..+.
T Consensus 164 dv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 164 QVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHTTTEEEEEECCG
T ss_pred HHHHHHHcCCeEEEeCCH
Confidence 999999999865555543
No 90
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.86 E-value=34 Score=33.50 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=23.8
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEecCH
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFDSI 149 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~ 149 (419)
.|+..|.+.+.+++..++..|+..+.+.+-
T Consensus 347 PIIg~GGI~s~eDa~e~l~aGAd~VqIgra 376 (415)
T 3i65_A 347 PIIASGGIFSGLDALEKIEAGASVCQLYSC 376 (415)
T ss_dssp CEEECSSCCSHHHHHHHHHHTEEEEEESHH
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 578888889999999998888876666553
No 91
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=49.84 E-value=23 Score=33.14 Aligned_cols=102 Identities=20% Similarity=0.204 Sum_probs=59.6
Q ss_pred HHHHHHCC-CCCCcEEEcCCC---CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCC-
Q 045356 108 IQAVLALS-VSPDRIIYANAC---KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWHPKCELLIRIKSPVDGGA- 176 (419)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~---k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~~~~~v~lRv~~~~~~g~- 176 (419)
+..+.+.| +.+.+++..|.- .++++.+.+-+.|+..+..+.+.+ ++.+.+.....++.|-++.+.-..+
T Consensus 164 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 243 (313)
T 1gq6_A 164 FRHGIDEKLIDPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAF 243 (313)
T ss_dssp HHHHHHTTSEEEEEEEEEEECCC------CHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGBCTTT
T ss_pred HHHhhhccCCCCCcEEEEEecCCCCCHHHHHHHHHcCCEEEEHHHHhhcCHHHHHHHHHHHcCCCeEEEEEeecCcCccc
Confidence 44555555 345678877654 256778888889987555554432 2233322224568887777642111
Q ss_pred --CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 177 --RYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 177 --~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
...+....|++..|+.++++.+.. .++.|+..-
T Consensus 244 aPgtgtp~pgGlt~~e~~~~l~~l~~--~~vvg~Div 278 (313)
T 1gq6_A 244 APGTGTPAPGGLLSREVLALLRCVGD--LKPVGFDVM 278 (313)
T ss_dssp CCSBSSCCSSCBCHHHHHHHGGGGGG--SEEEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHcc--CCeEEEEEE
Confidence 123346899999999999887733 578887665
No 92
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=49.49 E-value=1.4e+02 Score=26.32 Aligned_cols=85 Identities=20% Similarity=0.258 Sum_probs=54.9
Q ss_pred HHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEc------CHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHH
Q 045356 65 YHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCA------SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAA 137 (419)
Q Consensus 65 i~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~Va------S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~ 137 (419)
++++++..|+..+.|..... .+. .+.+.|+ ++... +..-+..+.+.|+ .-..|+ ..++++++.++
T Consensus 143 l~~~~~~~p~~~~~~l~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~--~v~~WT--Vn~~~~~~~l~ 214 (238)
T 3no3_A 143 CKEFIRLCPKSEVSYLNGEL-SPM---ELKELGFTGLDYHYKVLQSHPDWVKDCKVLGM--TSNVWT--VDDPKLMEEMI 214 (238)
T ss_dssp HHHHHHHCTTSCEEECSSCS-CHH---HHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTC--EEEEEC--CCSHHHHHHHH
T ss_pred HHHHHHHCCCCeEEEEeCCC-CHH---HHHHCCCceEeccHHhhhCCHHHHHHHHHCCC--EEEEEC--CCCHHHHHHHH
Confidence 45566667777666655322 232 3445565 44432 3345667788887 334554 35788999999
Q ss_pred HCCCcEEEecCHHHHHHHHh
Q 045356 138 SVGVNLTTFDSIQELDKIRK 157 (419)
Q Consensus 138 ~~gi~~i~vdS~~el~~i~~ 157 (419)
+.|+.-|.-|..+.+..+.+
T Consensus 215 ~~GVdgIiTD~P~~~~~~l~ 234 (238)
T 3no3_A 215 DMGVDFITTDLPEETQKILH 234 (238)
T ss_dssp HHTCSEEEESCHHHHHHHHH
T ss_pred HcCCCEEECCCHHHHHHHHH
Confidence 99998788899988887643
No 93
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=49.19 E-value=45 Score=29.63 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE------------EcCCCCCHHHHHHHHHCCCcEEEec
Q 045356 87 PAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII------------YANACKPVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii------------~~gp~k~~~~l~~a~~~gi~~i~vd 147 (419)
..+++...+.|+ ++.+.|.++++.+++.- + -.++ +..| +.+++..+++.|+..+.++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~v-~-~Pvig~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~ 108 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEGIDNLRMTRSLV-S-VPIIGIIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVD 108 (232)
T ss_dssp HHHHHHHHHTTCSEEEEESHHHHHHHHTTC-C-SCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHCCCeEEEECCHHHHHHHHHhc-C-CCEEEEEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEEC
Confidence 567777778887 89999999999988762 2 1232 2222 3568888889998866554
No 94
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=48.90 E-value=86 Score=28.70 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=58.6
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCCC---CCCCCCCC
Q 045356 116 VSPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWHPKCELLIRIKSPVDGGAR---YPLDSKFG 185 (419)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~~~~~v~lRv~~~~~~g~~---~~~~sRfG 185 (419)
+.+.+++..|.- .++++.+.+-+.|+..+..+.+.+ ++++.+..+...+.|-++.+.-..+. ..+....|
T Consensus 157 ~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~l~~~~vylSiDiDvlDp~~aPgtgtp~pgG 236 (290)
T 2ef5_A 157 VDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDRLGVARIAEEVLKHLQGLPLHVSLDADVLDPTLAPGVGTPVPGG 236 (290)
T ss_dssp CCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHTTTSCEEEEEEGGGBCTTTCCCCSSCCSSC
T ss_pred cCcccEEEEECCCCCHHHHHHHHHcCCeEEEHHHHHhcCHHHHHHHHHHhcCCCcEEEEEccCCCChhhCCCCCCCCCCC
Confidence 456678876642 256788888888887555554433 23333333345688877776421111 22346899
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 186 ANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 186 i~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
++..|+.++++.+... .++.|+..-
T Consensus 237 lt~~e~~~~l~~l~~~-~~vvg~Div 261 (290)
T 2ef5_A 237 LTYREAHLLMEILAES-GRVQSLDLV 261 (290)
T ss_dssp BCHHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred CCHHHHHHHHHHHHcC-CCEEEEEEE
Confidence 9999999999887543 357776554
No 95
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=48.05 E-value=1.4e+02 Score=26.12 Aligned_cols=95 Identities=5% Similarity=0.029 Sum_probs=59.7
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCc---HHHHHHHHH---cCCcEEEc----C--HHHHHHHHHCCCC
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPE---PAILETLAA---LGSNFDCA----S--PSEIQAVLALSVS 117 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~---~~v~~~l~~---~G~g~~Va----S--~~E~~~a~~~G~~ 117 (419)
....++.+.+ ++++++..|+..+.+.+..... ...++.+.. .++..... + ..-++.+++.|..
T Consensus 126 ~~~vii~Sf~-----l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~v~~~~~~G~~ 200 (234)
T 1o1z_A 126 RKNLIFSSFD-----LDLLDEKFKGTKYGYLIDEENYGSIENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGIV 200 (234)
T ss_dssp CCSEEEEESC-----HHHHHHHCTTSCEEEECCTTTTCSHHHHHHHHHHHCCSEEEEEGGGGGSHHHHHHHHHHHHTTCE
T ss_pred cCCEEEEchh-----HHHHHhhCCCCcEEEEeccccccCHHHHHHHcCCCCCCEEEeCHHHhcCCccHHHHHHHHHcCCE
Confidence 4556666665 6778887888777777765322 233444443 33333333 3 4455677888862
Q ss_pred CCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHH
Q 045356 118 PDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDK 154 (419)
Q Consensus 118 ~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~ 154 (419)
-..|+ ..++++++.+++. +.-+..|..+.+..
T Consensus 201 --v~~wT--vn~~~~~~~l~~~-vdgIiTD~P~~~~~ 232 (234)
T 1o1z_A 201 --IFVWT--LNDPEIYRKIRRE-IDGVITDEVELFVK 232 (234)
T ss_dssp --EEEES--CCCHHHHHHHGGG-CSEEEESCHHHHHH
T ss_pred --EEEeC--CCCHHHHHHHHHh-CCEEEcCCHHHHhh
Confidence 34444 3578899999888 88778888877654
No 96
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=47.95 E-value=2.2e+02 Score=28.25 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=56.0
Q ss_pred CCCcEEEE-----eHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEcC------------------
Q 045356 49 LDEPFYVL-----DLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCAS------------------ 104 (419)
Q Consensus 49 ~~tP~~v~-----d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS------------------ 104 (419)
.+-..+++ +.+...+.++++++.+|+..+. +|.-.+.+.++.+.+.|+ ++.|+.
T Consensus 266 aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi--~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~ 343 (514)
T 1jcn_A 266 AGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVI--GGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQ 343 (514)
T ss_dssp TTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEE--EEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCH
T ss_pred cCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceE--ecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccc
Confidence 34555665 3334556777777777544332 344456677777777777 565521
Q ss_pred ---HHHHHHHHHC-CCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 105 ---PSEIQAVLAL-SVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 105 ---~~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
..++..+.+. ++ .++-.|.+.+..++..|+..|+..+.+.+
T Consensus 344 ~~~~~~~~~~~~~~~i---pVia~GGI~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 344 GTAVYKVAEYARRFGV---PIIADGGIQTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp HHHHHHHHHHHGGGTC---CEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred hhHHHHHHHHHhhCCC---CEEEECCCCCHHHHHHHHHcCCCeeeECH
Confidence 2333333332 32 46667777777788888777776555554
No 97
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=47.14 E-value=2e+02 Score=28.27 Aligned_cols=83 Identities=18% Similarity=0.142 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEcC---------------------HHHHHHHHHC-CC
Q 045356 60 VVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCAS---------------------PSEIQAVLAL-SV 116 (419)
Q Consensus 60 ~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS---------------------~~E~~~a~~~-G~ 116 (419)
...+.++++++.+|+..+. ++.-..++.++.+.+.|+ .+.|+. +.++..+++. ++
T Consensus 264 ~~~e~i~~i~~~~p~~pvi--~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~i 341 (494)
T 1vrd_A 264 RVIETLEMIKADYPDLPVV--AGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDV 341 (494)
T ss_dssp HHHHHHHHHHHHCTTSCEE--EEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHCCCceEE--eCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 3556666666666543322 244445556666667776 555521 1122222221 22
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHCCCcEEEec
Q 045356 117 SPDRIIYANACKPVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vd 147 (419)
.++..|.+.+..++..|+..|+..+.+.
T Consensus 342 ---pvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 342 ---PIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp ---CEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred ---CEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 3666666667777777777776654444
No 98
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=46.20 E-value=1.3e+02 Score=27.55 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=58.8
Q ss_pred CCCcEEEcCCC-CCHHHHHHHHHC-CCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCC---CCCCCCCCCCCHHHH
Q 045356 117 SPDRIIYANAC-KPVSHIKYAASV-GVNLTTFDSIQELDKIRKWHPKCELLIRIKSPVDGGA---RYPLDSKFGANPEEV 191 (419)
Q Consensus 117 ~~~~Ii~~gp~-k~~~~l~~a~~~-gi~~i~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~---~~~~~sRfGi~~ee~ 191 (419)
.+++++..|.- .++++.+++-+. ++.++..+ ...++.+.+.....++.|-++.+.-..+ ...+....|++..|+
T Consensus 149 ~~~~i~~iGiR~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~~vylSiDiDvlDpa~aPgtgtp~pgGlt~~e~ 227 (287)
T 3lhl_A 149 GDNKIFQFGIRSGTKEEFKFATEEKHTYMEIGG-IDTFENIVNMLNGKNIYLTIDLDVLDASVFPGTGTPEPGGVNYREF 227 (287)
T ss_dssp CTTSEEEEEECBCCHHHHHHHHTSCSSEEEETC-CTTHHHHHHHTTTCEEEEEEEGGGBCTTTCCSBSSCCSSCBCHHHH
T ss_pred CcccEEEEEcCCCCHHHHHHHHhcCCCEEEecH-HhHHHHHHHHcCCCcEEEEEecCcCCHhhCCCCCCCCCCCCCHHHH
Confidence 45677765532 356777777776 66544444 2445544444344577777776541111 123447899999999
Q ss_pred HHHHHHHHhcCCeEEEEEEe
Q 045356 192 AHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 192 ~~~l~~~~~~~l~l~Glh~H 211 (419)
.++++.+...+.++.|+..-
T Consensus 228 ~~~l~~l~~~~~~vvg~Div 247 (287)
T 3lhl_A 228 QEIFKIIKNSNINIVGCDIV 247 (287)
T ss_dssp THHHHHHHTSCCEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEE
Confidence 99998876556788888765
No 99
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=45.90 E-value=1.6e+02 Score=27.53 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHh-cC-C--eEEEEEEee
Q 045356 186 ANPEEVAHLLGAAQA-SG-L--AVIGVAFHI 212 (419)
Q Consensus 186 i~~ee~~~~l~~~~~-~~-l--~l~Glh~H~ 212 (419)
..|.++.++++.+++ .. + ...|+|+|-
T Consensus 177 ~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hn 207 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVSNIDKAILSAHCHN 207 (325)
T ss_dssp CCHHHHHHHHHHHHHHCSCGGGSEEEECBCC
T ss_pred cCHHHHHHHHHHHHHhCCCCCceEEEEEeCC
Confidence 478888888888765 23 1 356788883
No 100
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=45.72 E-value=1.4e+02 Score=25.30 Aligned_cols=42 Identities=10% Similarity=0.123 Sum_probs=24.2
Q ss_pred cCHHHHHHHHHCCCCCCcEEEcCCCC-------------------CHHHHHHHHHCCCcEEEec
Q 045356 103 ASPSEIQAVLALSVSPDRIIYANACK-------------------PVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k-------------------~~~~l~~a~~~gi~~i~vd 147 (419)
.+++|++.+.++|. + +++..... +..++..|.+.|+..+.+.
T Consensus 71 ~~~~~~~~a~~~Ga--d-~iv~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 71 TSVEQCRKAVESGA--E-FIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLF 131 (205)
T ss_dssp CSHHHHHHHHHHTC--S-EEECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEET
T ss_pred CCHHHHHHHHHcCC--C-EEEcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEc
Confidence 46777777777664 2 33332222 4667777777777655443
No 101
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=45.67 E-value=47 Score=29.48 Aligned_cols=57 Identities=19% Similarity=0.294 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE------------EcCCCCCHHHHHHHHHCCCcEEEec
Q 045356 87 PAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII------------YANACKPVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii------------~~gp~k~~~~l~~a~~~gi~~i~vd 147 (419)
..+++...+.|. ++.+.|.++++.+++. ++- .|+ |..| +.+++..+.+.|+..+.++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~-v~~-Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~ 108 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEGIENLRTVRPH-LSV-PIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFD 108 (229)
T ss_dssp HHHHHHHHHTTCSEEEEESHHHHHHHGGG-CCS-CEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHCCCcEEEECCHHHHHHHHHh-cCC-CEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEEC
Confidence 567777778887 9999999999998876 221 222 2223 3568888899999866554
No 102
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=45.48 E-value=36 Score=30.55 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=7.6
Q ss_pred HHHHHHHHHCCCcE
Q 045356 130 VSHIKYAASVGVNL 143 (419)
Q Consensus 130 ~~~l~~a~~~gi~~ 143 (419)
.+.++.+.+.|..-
T Consensus 18 ~~~l~~~~~~G~~~ 31 (286)
T 3dx5_A 18 TDIVQFAYENGFEG 31 (286)
T ss_dssp HHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCCE
Confidence 34555556666553
No 103
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=45.07 E-value=78 Score=30.95 Aligned_cols=103 Identities=6% Similarity=0.069 Sum_probs=69.7
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEc
Q 045356 57 DLGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~ 124 (419)
|++...+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++.- + -.|...
T Consensus 185 ~~~~d~e~v~avR~avG~d~~L~--vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~-~-iPIa~d 260 (433)
T 3rcy_A 185 DISLSVEFCRKIRAAVGDKADLL--FGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAV-R-IPVATG 260 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTSSEEE--ECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHS-S-SCEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCeEE--EeCCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhcc-C-CCEEec
Confidence 45666778888998884 55554 788872 456677777786 66632 556666666641 1 357777
Q ss_pred CCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCCCCe
Q 045356 125 NACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHPKCE 163 (419)
Q Consensus 125 gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~~~~ 163 (419)
....+..+++.+++.| +..+.+| .+.+..++++.+....
T Consensus 261 E~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~g 305 (433)
T 3rcy_A 261 ERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYN 305 (433)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcC
Confidence 7778889999998876 5666665 5777777777654443
No 104
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=44.98 E-value=1.4e+02 Score=26.26 Aligned_cols=92 Identities=21% Similarity=0.233 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHhcCC-eEEEEEEeeCCC--C-CCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCCCCCHH
Q 045356 185 GANPEEVAHLLGAAQASGL-AVIGVAFHIGSE--A-TNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGFACNPGFH 260 (419)
Q Consensus 185 Gi~~ee~~~~l~~~~~~~l-~l~Glh~H~gs~--~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~~~~~~~~ 260 (419)
-++.+++.++.+.+++.++ .+ .+|.... . .+++.....++.+++.++.+...| .+.-.++.|.. . . +
T Consensus 45 ~~~~~~~~~~~~~~~~~gl~~~---~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~a~~lG-a~~vv~h~g~~--~-~--~ 115 (270)
T 3aam_A 45 ALSPAEVEAFRALREASGGLPA---VIHASYLVNLGAEGELWEKSVASLADDLEKAALLG-VEYVVVHPGSG--R-P--E 115 (270)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCE---EEECCTTCCTTCSSTHHHHHHHHHHHHHHHHHHHT-CCEEEECCCBS--C-H--H
T ss_pred CCCHHHHHHHHHHHHHcCCceE---EEecCcccCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCEEEECCCCC--C-H--H
Confidence 4556777777777788888 43 3443211 1 145556677888888888888888 44333343332 2 2 5
Q ss_pred HHHHHHHHHHHhhCC-CccCCCccEEEEcCc
Q 045356 261 EAASIIKDAIQTYFP-NETAAGHLSVISEPG 290 (419)
Q Consensus 261 ~~~~~i~~~l~~~~~-~~~~~~~~~li~EpG 290 (419)
.+.+.+++.... .. +. + ++|.+|+-
T Consensus 116 ~~~~~l~~l~~~-a~~~~-g---v~l~lEn~ 141 (270)
T 3aam_A 116 RVKEGALKALRL-AGVRS-R---PVLLVENT 141 (270)
T ss_dssp HHHHHHHHHHHH-HTCCS-S---SEEEEECC
T ss_pred HHHHHHHHHHHh-hcccC-C---CEEEEecC
Confidence 555555554433 22 21 3 88999975
No 105
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=44.38 E-value=49 Score=30.94 Aligned_cols=102 Identities=11% Similarity=0.142 Sum_probs=62.3
Q ss_pred HHHHHHCCC-CCCcEEEcCCC---CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCCC
Q 045356 108 IQAVLALSV-SPDRIIYANAC---KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWHPKCELLIRIKSPVDGGAR 177 (419)
Q Consensus 108 ~~~a~~~G~-~~~~Ii~~gp~---k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~~~~~v~lRv~~~~~~g~~ 177 (419)
+..+.+.|. .+++++..|.- .++++.+++-+.|+..+..+.+.+ ++++.+......+.|-++.+.-..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 251 (319)
T 3nio_A 172 FRRAVEEDLLDCDRVVQIGLRAQGYTAEDFNWSRXQGFRVVQAEECWHXSLEPLMAEVREXVGGGPVYLSFDIDGIDPAW 251 (319)
T ss_dssp HHHHHHTTCEEEEEEEEEEECSEESSTHHHHHHHHHTCEEEEGGGTTTCCSHHHHHHHHHHHCSSEEEEEEEGGGBCTTT
T ss_pred HHHHhhccCCCCCcEEEEEeCCCCCCHHHHHHHHhcCcEEEEHHHhhhcCHHHHHHHHHHhcCCCcEEEEEecCccChhh
Confidence 344555543 44677777654 356888888888987655544321 23343332345677777766421111
Q ss_pred ---CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 178 ---YPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 178 ---~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
..+....|++..|+.++++.+. +.++.|+..-
T Consensus 252 aPgtgtp~pgGlt~~e~~~~l~~l~--~~~vvg~Div 286 (319)
T 3nio_A 252 APGTGTPEIGGLTTIQAMEIIRGCQ--GLDLIGCDLV 286 (319)
T ss_dssp CCCBSSCCSSCBCHHHHHHHHHTTT--TSEEEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhc--cCCeeEEEEE
Confidence 2234689999999988887653 5678888654
No 106
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=44.10 E-value=47 Score=30.63 Aligned_cols=55 Identities=25% Similarity=0.251 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEee-C-----C-CC--------------CCH-HHHHHHHHHHHHHHHHHHHcCCCcc
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHI-G-----S-EA--------------TNL-DAFHAAIAEAKTVFETAARLGMTKM 244 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~-g-----s-~~--------------~~~-~~~~~~~~~~~~l~~~l~~~g~~~~ 244 (419)
+++.++.+.+++.+|.+.++.+|. | . .. .++ +...+.++.+++.++.++++| .+.
T Consensus 51 ~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lG-a~~ 127 (340)
T 2zds_A 51 SYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLG-VDT 127 (340)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHT-CSE
T ss_pred HHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcC-CCE
Confidence 346667777788899999999886 1 1 10 032 334566788888888888988 443
No 107
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=44.06 E-value=1.7e+02 Score=25.85 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=67.6
Q ss_pred CHHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEE----EcCHHHH
Q 045356 34 GLLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFD----CASPSEI 108 (419)
Q Consensus 34 ~~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~----VaS~~E~ 108 (419)
.+.+.+-+++... ......++.+.+. +.++++++..|+..+.+.+...... ..+.+.+.++ ++. ..+..-+
T Consensus 129 ~~~~~v~~~l~~~-~~~~~vii~SF~~--~~l~~~~~~~p~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~v 204 (252)
T 2pz0_A 129 GIEEKLIKAIKEY-NFEERVIISSFNH--YSLRDVKKMAPHLKIGLLYQCGLVE-PWHMALRMEAYSLHPFYFNIIPELV 204 (252)
T ss_dssp THHHHHHHHHHHT-TCTTTEEEEESBH--HHHHHHHHHCTTSEEEEEECSBCSS-THHHHHHTTCSEEEEBGGGCCHHHH
T ss_pred HHHHHHHHHHHhc-CCCCCEEEEeCCH--HHHHHHHHHCCCCCEEEEecCcccc-HHHHHHHcCCeEEecchhcCCHHHH
Confidence 3444444444443 2334455533221 2345566667877776666544321 2234445554 333 3467777
Q ss_pred HHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHH
Q 045356 109 QAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIR 156 (419)
Q Consensus 109 ~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~ 156 (419)
+.+.+.|+. -..|+ ..++++++.+++.|+.-+..|..+.+..+.
T Consensus 205 ~~~~~~G~~--v~~wT--vn~~~~~~~l~~~GvdgIiTD~P~~~~~~l 248 (252)
T 2pz0_A 205 EGCKKNGVK--LFPWT--VDRKEDMERMIKAGVDGIITDDPETLINLV 248 (252)
T ss_dssp HHHHHTTCE--ECCBC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred HHHHHCCCE--EEEEC--CCCHHHHHHHHHcCCCEEEcCCHHHHHHHH
Confidence 888888873 22333 457889999999999877889888877654
No 108
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=43.64 E-value=1.3e+02 Score=26.44 Aligned_cols=47 Identities=17% Similarity=0.204 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
++.+.+++.++.+.+++.++.+.+++.... .. ++.+++.++.++.+|
T Consensus 56 ~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~---~~-------~~~~~~~i~~A~~lG 102 (257)
T 3lmz_A 56 LNSTDEQIRAFHDKCAAHKVTGYAVGPIYM---KS-------EEEIDRAFDYAKRVG 102 (257)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEEEE---CS-------HHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEEecccc---CC-------HHHHHHHHHHHHHhC
Confidence 455677777887778888999988887654 22 234445566666777
No 109
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=43.55 E-value=2.2e+02 Score=26.98 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=21.1
Q ss_pred HHHHHHHHc-CC--cE-EEcCHHHHHHHHHCCCCCCcEEE
Q 045356 88 AILETLAAL-GS--NF-DCASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 88 ~v~~~l~~~-G~--g~-~VaS~~E~~~a~~~G~~~~~Ii~ 123 (419)
..++.+.+. +. -+ .|.|.++++.+.++|. +-|.+
T Consensus 135 ~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGa--D~I~V 172 (361)
T 3khj_A 135 RTLKEIKSKMNIDVIVGNVVTEEATKELIENGA--DGIKV 172 (361)
T ss_dssp HHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTC--SEEEE
T ss_pred HHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCc--CEEEE
Confidence 344444443 54 22 6788888888888886 33444
No 110
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=43.41 E-value=1.4e+02 Score=29.49 Aligned_cols=26 Identities=12% Similarity=0.210 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHh-cCCeEEEEEEee
Q 045356 186 ANPEEVAHLLGAAQA-SGLAVIGVAFHI 212 (419)
Q Consensus 186 i~~ee~~~~l~~~~~-~~l~l~Glh~H~ 212 (419)
..|.++.++++.+++ .++ ..|+|+|-
T Consensus 184 ~~P~~v~~lv~~l~~~~~~-~i~~H~Hn 210 (464)
T 2nx9_A 184 LTPYAAEELVSTLKKQVDV-ELHLHCHS 210 (464)
T ss_dssp CCHHHHHHHHHHHHHHCCS-CEEEEECC
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEECC
Confidence 468888888888765 455 45788884
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=43.28 E-value=1.8e+02 Score=28.82 Aligned_cols=95 Identities=12% Similarity=0.103 Sum_probs=60.3
Q ss_pred CCcEEEEeH-----HHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEc--------------------
Q 045356 50 DEPFYVLDL-----GVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCA-------------------- 103 (419)
Q Consensus 50 ~tP~~v~d~-----~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~Va-------------------- 103 (419)
+-.++++|. ..+.+.++++++.+|+..+.. +.-...+.++.+.+.|+ .+.|.
T Consensus 243 G~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~--g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~ 320 (496)
T 4fxs_A 243 GVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQI 320 (496)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE--EEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHH
T ss_pred cCceEEeccccccchHHHHHHHHHHHHCCCceEEE--cccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHH
Confidence 444666653 456678888888887544332 33356677888888887 55542
Q ss_pred -CHHHHHHHH-HCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCH
Q 045356 104 -SPSEIQAVL-ALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSI 149 (419)
Q Consensus 104 -S~~E~~~a~-~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~ 149 (419)
.+.|+..+. +.++ .|+-.|.+.+..++..|+..|+..+.+.+.
T Consensus 321 ~~i~~v~~~~~~~~i---PVIa~GGI~~~~di~kala~GAd~V~iGs~ 365 (496)
T 4fxs_A 321 TAIADAAGVANEYGI---PVIADGGIRFSGDISKAIAAGASCVMVGSM 365 (496)
T ss_dssp HHHHHHHHHHGGGTC---CEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHHHHhccCCC---eEEEeCCCCCHHHHHHHHHcCCCeEEecHH
Confidence 013333322 2343 477778888888888888888876666653
No 112
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=43.10 E-value=1.2e+02 Score=26.49 Aligned_cols=78 Identities=15% Similarity=0.323 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCC-cEEEcCHHHHHHHHHCCCCCCcEE------------EcCCCCCHHHHHHHHHCCCcEEEecC-----
Q 045356 87 PAILETLAALGS-NFDCASPSEIQAVLALSVSPDRII------------YANACKPVSHIKYAASVGVNLTTFDS----- 148 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~VaS~~E~~~a~~~G~~~~~Ii------------~~gp~k~~~~l~~a~~~gi~~i~vdS----- 148 (419)
..+++.+.+.|+ ++.+.++..++.+++.- . -.++ +.+ .+.++++.+++.|+..+.++.
T Consensus 39 ~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~-~-~p~i~~~~~~~~~~~~~i~--~~~~~i~~~~~~Gad~V~l~~~~~~~ 114 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANSVRDIKEIQAIT-D-LPIIGIIKKDYPPQEPFIT--ATMTEVDQLAALNIAVIAMDCTKRDR 114 (234)
T ss_dssp HHHHHHHHHHTCSEEEEESHHHHHHHHTTC-C-SCEEEECBCCCTTSCCCBS--CSHHHHHHHHTTTCSEEEEECCSSCC
T ss_pred HHHHHHHHHCCCcEeecCCHHHHHHHHHhC-C-CCEEeeEcCCCCccccccC--ChHHHHHHHHHcCCCEEEEcccccCC
Confidence 568888888897 89999999988888762 1 1221 111 246789999999988666532
Q ss_pred ------HHHHHHHHhHCCCCeEEEEE
Q 045356 149 ------IQELDKIRKWHPKCELLIRI 168 (419)
Q Consensus 149 ------~~el~~i~~~~~~~~v~lRv 168 (419)
.+.++.+.+..+...+.+.+
T Consensus 115 ~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 115 HDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp TTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 23455566665555555544
No 113
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A
Probab=42.23 E-value=30 Score=32.64 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=61.5
Q ss_pred HHHHHHCCC-CCCcEEEcCCC---CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCC-
Q 045356 108 IQAVLALSV-SPDRIIYANAC---KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWHPKCELLIRIKSPVDGGA- 176 (419)
Q Consensus 108 ~~~a~~~G~-~~~~Ii~~gp~---k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~~~~~v~lRv~~~~~~g~- 176 (419)
+..+.+.|. .+.+++..|.- .++++++++-+.|+..+..+.+.+ ++++.+......+.|-++.+.-..+
T Consensus 169 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 248 (326)
T 3niq_A 169 FRRAIEEGLLDPLRTVQIGIRGSVYSPDDDAFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAF 248 (326)
T ss_dssp HHHHHHTTCEEEEEEEEEEECSCCSCTTSTHHHHHHTCEEEEHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEGGGBCTTT
T ss_pred HHHHHhccCCCCceEEEEeecCCCCCHHHHHHHHHCCCEEEEHHHhhhcCHHHHHHHHHHHhCCCeEEEEEeccccCHhh
Confidence 444555553 44677776643 246778888888887655555443 2233332233467777776642111
Q ss_pred --CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 177 --RYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 177 --~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
...+....|++..|+.++++.+. +.++.|+..-
T Consensus 249 aPgtgtp~pgGlt~~e~~~~l~~l~--~~~vvg~Div 283 (326)
T 3niq_A 249 APGTGTPEIGGMTSLQAQQLVRGLR--GLDLVGADVV 283 (326)
T ss_dssp CCCCSSCCSSCBCHHHHHHHHHTTT--TSCEEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHc--CCCEEEEEEE
Confidence 12234689999999998888663 4578887664
No 114
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=41.55 E-value=1.1e+02 Score=29.32 Aligned_cols=28 Identities=14% Similarity=0.135 Sum_probs=16.1
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEec
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vd 147 (419)
.|+..|.+.+.+++..++..|+..+.+.
T Consensus 258 pVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 258 CIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp EEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred eEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 3555566666666666666665544443
No 115
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=41.27 E-value=1.6e+02 Score=26.97 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCC--cEEEcCHHHHHHHHHCCCCCCcEEEc--CCCCCHHHHHHHHHCCCcEEE
Q 045356 87 PAILETLAALGS--NFDCASPSEIQAVLALSVSPDRIIYA--NACKPVSHIKYAASVGVNLTT 145 (419)
Q Consensus 87 ~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~--gp~k~~~~l~~a~~~gi~~i~ 145 (419)
.++++.+.+.++ .+|....+.++.++++|. .|+.. |....++-++.+.++|+.++.
T Consensus 70 ~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa---~iINdvsg~~~d~~m~~~~a~~~~~vVl 129 (280)
T 1eye_A 70 IPVVKELAAQGITVSIDTMRADVARAALQNGA---QMVNDVSGGRADPAMGPLLAEADVPWVL 129 (280)
T ss_dssp HHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC---CEEEETTTTSSCTTHHHHHHHHTCCEEE
T ss_pred HHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCCHHHHHHHHHhCCeEEE
Confidence 456666665564 899999999999999985 46653 322256677888888876543
No 116
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=41.26 E-value=60 Score=28.96 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=36.7
Q ss_pred ceeeeeccCC---cHHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEE
Q 045356 76 HPYYAVKCNP---EPAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLT 144 (419)
Q Consensus 76 ~i~~avKan~---~~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i 144 (419)
++.+++..+. ..++++.+.+.|+ .+++. ...|....++.-++ +-++=.|...+.++.+.|++.|...+
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~-~~~iGaGTVlt~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQP-EMLIGAGTILNGEQALAAKEAGATFV 110 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT-TCEEEEECCCSHHHHHHHHHHTCSEE
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCC-CCEEeECCcCCHHHHHHHHHcCCCEE
Confidence 4556666655 3566666667776 66663 23333332222232 33333455566777777777776643
No 117
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=41.05 E-value=59 Score=31.44 Aligned_cols=79 Identities=11% Similarity=0.108 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE--Ec--CHHHHHHHHHCCCCCCcEEEcC
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD--CA--SPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~--Va--S~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++.-.+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++ +. ..+.+..+++. .+ -.|....
T Consensus 191 ~~~d~~~v~avR~a~G~d~~l~--vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~-~~-iPIa~dE 266 (404)
T 4e5t_A 191 LERSEAFCKQIRAAVGTKADLL--FGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARY-TS-IPVATGE 266 (404)
T ss_dssp HHHHHHHHHHHHHHHGGGSEEE--ECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-CS-SCEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCeEE--EeCCCCcCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhh-CC-CCEEeCC
Confidence 4556677888888874 55544 788872 345666667776 565 22 34444444443 11 2345444
Q ss_pred CCCCHHHHHHHHHCC
Q 045356 126 ACKPVSHIKYAASVG 140 (419)
Q Consensus 126 p~k~~~~l~~a~~~g 140 (419)
...+..+++.+++.|
T Consensus 267 ~~~~~~~~~~~i~~~ 281 (404)
T 4e5t_A 267 RLCTKYEFSRVLETG 281 (404)
T ss_dssp TCCHHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHhC
Confidence 444555555555443
No 118
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=40.51 E-value=1.9e+02 Score=27.11 Aligned_cols=133 Identities=14% Similarity=0.052 Sum_probs=73.6
Q ss_pred HHHHHHHHHcCC-cEEE-----------------cCHHHHHHHHHCCCCCCcEEEc-CC-CCCHHHHHHHHHCCCcEE-E
Q 045356 87 PAILETLAALGS-NFDC-----------------ASPSEIQAVLALSVSPDRIIYA-NA-CKPVSHIKYAASVGVNLT-T 145 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~V-----------------aS~~E~~~a~~~G~~~~~Ii~~-gp-~k~~~~l~~a~~~gi~~i-~ 145 (419)
..+++.|.+.|+ .+|+ .+..|.........+...|... .| ....+.++.|.+.|+..+ +
T Consensus 33 ~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I 112 (345)
T 1nvm_A 33 RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRV 112 (345)
T ss_dssp HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEE
Confidence 456777777777 6777 3455554333223333345544 22 124788899988887643 3
Q ss_pred ecCH---HHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHH
Q 045356 146 FDSI---QELDKIRKWHPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAF 222 (419)
Q Consensus 146 vdS~---~el~~i~~~~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~ 222 (419)
.++. ++++...+.+++..+.++..+.. -+..+++.+.++++.+...+.....+.=-.|. ..+..+
T Consensus 113 ~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~----------a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~--~~P~~v 180 (345)
T 1nvm_A 113 ATHCTEADVSKQHIEYARNLGMDTVGFLMM----------SHMIPAEKLAEQGKLMESYGATCIYMADSGGA--MSMNDI 180 (345)
T ss_dssp EEETTCGGGGHHHHHHHHHHTCEEEEEEES----------TTSSCHHHHHHHHHHHHHHTCSEEEEECTTCC--CCHHHH
T ss_pred EEeccHHHHHHHHHHHHHHCCCEEEEEEEe----------CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCc--cCHHHH
Confidence 3444 34444444333333445555421 12346778888888777777777665533333 456666
Q ss_pred HHHHHHHHH
Q 045356 223 HAAIAEAKT 231 (419)
Q Consensus 223 ~~~~~~~~~ 231 (419)
.+.++.+++
T Consensus 181 ~~lv~~l~~ 189 (345)
T 1nvm_A 181 RDRMRAFKA 189 (345)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555444
No 119
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=40.19 E-value=59 Score=30.65 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHh-c-CCeEEEEEEee
Q 045356 186 ANPEEVAHLLGAAQA-S-GLAVIGVAFHI 212 (419)
Q Consensus 186 i~~ee~~~~l~~~~~-~-~l~l~Glh~H~ 212 (419)
..|+++.++++.+++ . ++. .|+|+|-
T Consensus 195 ~~P~~v~~lv~~l~~~~p~~~-i~~H~Hn 222 (337)
T 3ble_A 195 LSPEETFQGVDSLIQKYPDIH-FEFHGHN 222 (337)
T ss_dssp CCHHHHHHHHHHHHHHCTTSC-EEEECBC
T ss_pred cCHHHHHHHHHHHHHhcCCCe-EEEEecC
Confidence 378888888887765 3 444 5788883
No 120
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=39.40 E-value=2.2e+02 Score=25.84 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=59.6
Q ss_pred EEeHHHHHHHHHHHHHhCCCCcee-eeeccCCcHHHHHHHHHcCC-cEE-----------EcCHHHHHHHHHCCCCCCcE
Q 045356 55 VLDLGVVISLYHQLISNLPMVHPY-YAVKCNPEPAILETLAALGS-NFD-----------CASPSEIQAVLALSVSPDRI 121 (419)
Q Consensus 55 v~d~~~l~~ni~~~~~~~~~~~i~-~avKan~~~~v~~~l~~~G~-g~~-----------VaS~~E~~~a~~~G~~~~~I 121 (419)
.-|.....+..+.+.+. +++++ |. +.++.+++.+.+.|+ .+. +.+++-++.+++.-.+.-.+
T Consensus 107 ~pD~~~tv~aa~~L~k~--Gf~Vlpy~---~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPV 181 (268)
T 2htm_A 107 LPDPLETLKAAERLIEE--DFLVLPYM---GPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPV 181 (268)
T ss_dssp CCCHHHHHHHHHHHHHT--TCEECCEE---CSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCB
T ss_pred CcCHHHHHHHHHHHHHC--CCEEeecc---CCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeE
Confidence 45666666666666543 55555 43 577888999988775 333 35666777777721110247
Q ss_pred EEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 122 IYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
+..|.+.++++...|.+.|+.-+.+.|
T Consensus 182 I~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 182 VVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp EEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 778888899999999999987555554
No 121
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=39.14 E-value=1.3e+02 Score=27.95 Aligned_cols=101 Identities=20% Similarity=0.317 Sum_probs=56.5
Q ss_pred CHHHHHHHHhHCCC-CeEEEEEecCCCCCCCCCCCCCCCCCH-HHHHHHH----HHHHhcCCeEEEEEEeeCCC----CC
Q 045356 148 SIQELDKIRKWHPK-CELLIRIKSPVDGGARYPLDSKFGANP-EEVAHLL----GAAQASGLAVIGVAFHIGSE----AT 217 (419)
Q Consensus 148 S~~el~~i~~~~~~-~~v~lRv~~~~~~g~~~~~~sRfGi~~-ee~~~~l----~~~~~~~l~l~Glh~H~gs~----~~ 217 (419)
|+..+.++.+.+.. .--..|++.+.-. ..+.-.+|.+. +++.+.+ +.+++.++++ .+|.|.. ..
T Consensus 58 Nl~~l~~il~~n~~~~I~~yRiSS~l~P---~~thp~~~~~~~~~~~~~l~~iG~~a~~~~iRL---S~HPgqF~vL~S~ 131 (310)
T 3tc3_A 58 NLLCLKNILEWNLKHEILFFRISSNTIP---LASHPKFHVNWKDKLSHILGDIGDFIKENSIRI---SMHPGQYVVLNSV 131 (310)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCTTSST---TTTSTTCCCCHHHHTHHHHHHHHHHHHHTTCEE---EECCCTTCCTTCS
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCcccCC---CccccccccchHHHHHHHHHHHHHHHHHcCcEE---EecCCCCccCCCC
Confidence 34444444443211 1135788875411 11123466655 3333333 3455678886 6998875 34
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCc-ceEEEeCCCCCC
Q 045356 218 NLDAFHAAIAEAKTVFETAARLGMTK-MRVLDIGGGFAC 255 (419)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~ldiGGG~~~ 255 (419)
+++.....++.+..=.+.+...| .+ .-.|++||.+|.
T Consensus 132 ~~~Vv~~SI~dL~yHa~~ld~mG-~~~~i~IH~Gg~yGd 169 (310)
T 3tc3_A 132 REEVVRSSIMELKYHADLLDSMG-IEGKIQIHVGSSMNG 169 (310)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC-CCcCceeecCCcCCC
Confidence 56777777777665555566667 33 335788988874
No 122
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=39.07 E-value=1.3e+02 Score=28.61 Aligned_cols=26 Identities=8% Similarity=-0.181 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNP 85 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~ 85 (419)
++.-.+.++++++.++ ++.+ .+++|.
T Consensus 172 ~~~d~~~v~avR~a~g~~~~l--~vDan~ 198 (378)
T 3eez_A 172 VERDIARIRDVEDIREPGEIV--LYDVNR 198 (378)
T ss_dssp HHHHHHHHHHHTTSCCTTCEE--EEECTT
T ss_pred HHHHHHHHHHHHHHcCCCceE--EEECCC
Confidence 4455556666666663 4443 366665
No 123
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=39.05 E-value=1.1e+02 Score=26.92 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=51.5
Q ss_pred CCceeeeeccCC---cHHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEE
Q 045356 74 MVHPYYAVKCNP---EPAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTT 145 (419)
Q Consensus 74 ~~~i~~avKan~---~~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~ 145 (419)
..++.+++.... ..++++.+.+.|+ .++|. ...|....++.-+ |+-++=.|...+.++.+.+++.|..+++
T Consensus 12 ~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~-p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 12 TKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV-PEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp SCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC-TTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC-CCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 356777787776 4788999999999 88985 3444444444435 3456666888899999999999998653
No 124
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=37.83 E-value=2.4e+02 Score=25.71 Aligned_cols=114 Identities=13% Similarity=0.219 Sum_probs=57.2
Q ss_pred HHHHHHHHCCCCCCcEEEcCCC-----------CCHHH-HHHHHHC-CCcEEEec-------CHHHHHHHHhHCCCCeEE
Q 045356 106 SEIQAVLALSVSPDRIIYANAC-----------KPVSH-IKYAASV-GVNLTTFD-------SIQELDKIRKWHPKCELL 165 (419)
Q Consensus 106 ~E~~~a~~~G~~~~~Ii~~gp~-----------k~~~~-l~~a~~~-gi~~i~vd-------S~~el~~i~~~~~~~~v~ 165 (419)
.|++.+.+.|+ ..|.+.|.. ..-.+ ++.+.+. |+..+.+. +.+.++.+.+..+ +.
T Consensus 40 ~ei~~l~~~G~--~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g~---~~ 114 (304)
T 2qgq_A 40 REVEDLLKEGK--KEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDK---VV 114 (304)
T ss_dssp HHHHHHHHTTC--CEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCTT---BC
T ss_pred HHHHHHHHCCC--cEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCCC---Cc
Confidence 45555666676 456665421 12223 3333343 55433332 3445666655431 22
Q ss_pred EEEecCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHh--cCCeEEEEEEeeCCCCCCHHHHHHHH
Q 045356 166 IRIKSPVDGGAR--YPLDSKFGANPEEVAHLLGAAQA--SGLAVIGVAFHIGSEATNLDAFHAAI 226 (419)
Q Consensus 166 lRv~~~~~~g~~--~~~~sRfGi~~ee~~~~l~~~~~--~~l~l~Glh~H~gs~~~~~~~~~~~~ 226 (419)
-+++++...++. ....+| +.+.+++.+.++.+++ +++.+ +..+-+|-...+.+.+.+.+
T Consensus 115 ~~l~i~lqs~s~~vl~~m~r-~~t~e~~~~~i~~l~~~~~gi~i-~~~~IvG~PgEt~ed~~~t~ 177 (304)
T 2qgq_A 115 KYFDVPVQHGSDKILKLMGR-TKSSEELKKMLSSIRERFPDAVL-RTSIIVGFPGETEEDFEELK 177 (304)
T ss_dssp CEEECCCBCSCHHHHHHTTC-CSCHHHHHHHHHHHHHHCTTCEE-EEEEEECCTTCCHHHHHHHH
T ss_pred cEEEEecccCCHHHHHHhCC-CCCHHHHHHHHHHHHhhCCCCEE-EEEEEEeCCCCCHHHHHHHH
Confidence 355555443211 111244 5678888899988877 67755 34455554344555554433
No 125
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=37.82 E-value=2.1e+02 Score=25.22 Aligned_cols=117 Identities=10% Similarity=0.014 Sum_probs=66.1
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEeHHHHHHHHHHHHHhCCCCceeeee-ccCC-c-HHHHHHHHHcCC-cEE----EcCHH
Q 045356 35 LLEFMESIILKRQELDEPFYVLDLGVVISLYHQLISNLPMVHPYYAV-KCNP-E-PAILETLAALGS-NFD----CASPS 106 (419)
Q Consensus 35 ~~~~~~~~~~~~~~~~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~av-Kan~-~-~~v~~~l~~~G~-g~~----VaS~~ 106 (419)
+.+.+-+.+... .....+++.+.+ .+.++++++..|...+.+.+ .... . ...+..+.+.|+ ++. ..+..
T Consensus 127 ~~~~v~~~l~~~-~~~~~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 203 (258)
T 2o55_A 127 DHQRLLLLVEKY-HMQERVDYCSFH--HEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKE 203 (258)
T ss_dssp HHHHHHHHHHTT-TCGGGEEEEESS--HHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGCCHH
T ss_pred HHHHHHHHHHHc-CCCCCEEEEeCC--HHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecChhhcCHH
Confidence 444444444332 233455554432 22345566667877776666 3221 1 123233445554 322 33567
Q ss_pred HHHHHHHCCCCCCcEEEcC-CC-CCHHHHHHHHHCCCcEEEecCHHHHHHHH
Q 045356 107 EIQAVLALSVSPDRIIYAN-AC-KPVSHIKYAASVGVNLTTFDSIQELDKIR 156 (419)
Q Consensus 107 E~~~a~~~G~~~~~Ii~~g-p~-k~~~~l~~a~~~gi~~i~vdS~~el~~i~ 156 (419)
-+..+++.|+. -..|+- +. .++++++.+++.|+.-+..|..+.+..+.
T Consensus 204 ~v~~~~~~G~~--v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~p~~~~~~l 253 (258)
T 2o55_A 204 QVCTAHEKGLS--VTVWMPWIFDDSEEDWKKCLELQVDLICSNYPFGLMNFL 253 (258)
T ss_dssp HHHHHHHTTCE--EEEECCTTCCCCHHHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred HHHHHHHCCCE--EEEeeCCCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHH
Confidence 77888888873 344432 00 46889999999999877889888877654
No 126
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=37.78 E-value=1.8e+02 Score=25.56 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=10.0
Q ss_pred CHHHHHHHHHCCCcEEEecCH
Q 045356 129 PVSHIKYAASVGVNLTTFDSI 149 (419)
Q Consensus 129 ~~~~l~~a~~~gi~~i~vdS~ 149 (419)
++++++.+++.|+.-+..|..
T Consensus 217 ~~~~~~~l~~~GvdgI~TD~p 237 (247)
T 2otd_A 217 KPQHAAELLRWGVDCICTDAI 237 (247)
T ss_dssp CHHHHHHHHHHTCSEEEESCT
T ss_pred CHHHHHHHHHcCCCEEEeCCH
Confidence 345555555555544444443
No 127
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=37.60 E-value=2e+02 Score=26.35 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhcCCe---EEEEEEeeC--CC--CCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 189 EEVAHLLGAAQASGLA---VIGVAFHIG--SE--ATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~---l~Glh~H~g--s~--~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
+++.++.+.+++.||. +.++ +|+. .. ..+.+...+.++.+++.++.++.+|
T Consensus 65 ~~~~~l~~~l~~~gL~~~~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG 122 (335)
T 2qw5_A 65 ENYTNLRHYLDSEGLENVKISTN-VGATRTFDPSSNYPEQRQEALEYLKSRVDITAALG 122 (335)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEE-CCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCcceeEEE-eccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4566666667788999 8874 3432 11 2355666677888888999889988
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=37.23 E-value=2.9e+02 Score=26.99 Aligned_cols=29 Identities=28% Similarity=0.200 Sum_probs=18.8
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
.++..|.+.+..++..|+..|+..+.+.+
T Consensus 338 pvia~GGi~~~~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 338 TIIADGGIKYSGDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp EEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CEEeeCCCCCHHHHHHHHHcCCcceeeCH
Confidence 46666666777777777777766555544
No 129
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=37.05 E-value=2.3e+02 Score=25.47 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeC--CC--CCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIG--SE--ATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~g--s~--~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
+++.++.+.+++.++.+.+ |+-+. .. ..+++...+.++.+++.++.++++|
T Consensus 66 ~~~~~l~~~l~~~gl~i~~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG 120 (309)
T 2hk0_A 66 AELATIRKSAKDNGIILTA-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLD 120 (309)
T ss_dssp HHHHHHHHHHHHTTCEEEE-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 5566677777788999987 43211 11 2355656677888888999888988
No 130
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=36.81 E-value=2.3e+02 Score=25.40 Aligned_cols=139 Identities=10% Similarity=0.103 Sum_probs=66.4
Q ss_pred CCcEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcH--HHHHHHHHcCCcEEEcCH-----------------HHH
Q 045356 50 DEPFYV--LDLGVVISLYHQLISNLPMVHPYYAVKCNPEP--AILETLAALGSNFDCASP-----------------SEI 108 (419)
Q Consensus 50 ~tP~~v--~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~--~v~~~l~~~G~g~~VaS~-----------------~E~ 108 (419)
+.|+-+ ++.+.++.-++. +++..+.-.+-+-..+ .+++++.+.|+.+-+... .-+
T Consensus 69 ~~pisIDT~~~~v~~aAl~a----~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~ 144 (262)
T 1f6y_A 69 NLTLCLDSTNIKAIEAGLKK----CKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELV 144 (262)
T ss_dssp CSEEEEECSCHHHHHHHHHH----CSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHH
T ss_pred CCeEEEeCCCHHHHHHHHhh----CCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHH
Confidence 455433 334444444332 2344555555443333 677777777775555432 123
Q ss_pred HHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCHHHHHHHHhHC-CCCeEEEEEecCCCCCCCCCCCCCCCCC
Q 045356 109 QAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSIQELDKIRKWH-PKCELLIRIKSPVDGGARYPLDSKFGAN 187 (419)
Q Consensus 109 ~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~el~~i~~~~-~~~~v~lRv~~~~~~g~~~~~~sRfGi~ 187 (419)
+.+.++|+++++|++-...-+ +..+... +.++++.++.+.+.. +..++++-++= -+||.+
T Consensus 145 ~~a~~~Gi~~~~IilDPg~g~-------~g~~~~~-~~~~l~~l~~l~~~~~pg~pvl~G~Sr-----------ksfg~~ 205 (262)
T 1f6y_A 145 AAADEFGLPMEDLYIDPLILP-------ANVAQDH-APEVLKTLQQIKMLADPAPKTVLGLSN-----------VSQNCQ 205 (262)
T ss_dssp HHHHHHTCCGGGEEEECCCCC-------TTTCTTH-HHHHHHHHHHHHTCCSSCCEEEEEGGG-----------GGTTCS
T ss_pred HHHHHCCCCcccEEEeCCCCc-------CCCChHH-HHHHHHHHHHHHHHhCCCCCEEEeecC-----------CcCCCC
Confidence 445667777777777533211 0111110 233444455554422 44455553331 357876
Q ss_pred HHHHHH-H-HHHHHhcCCeEEEEEEe
Q 045356 188 PEEVAH-L-LGAAQASGLAVIGVAFH 211 (419)
Q Consensus 188 ~ee~~~-~-l~~~~~~~l~l~Glh~H 211 (419)
..+... . +..+-..++...-+|.|
T Consensus 206 ~~~~l~~t~~~~a~~~g~~~~iv~~~ 231 (262)
T 1f6y_A 206 NRPLINRTFLAMAMACGLMSAIADAC 231 (262)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHHHHHHHhCCeEEECcC
Confidence 544322 2 22233467777766665
No 131
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=36.77 E-value=1.9e+02 Score=27.02 Aligned_cols=15 Identities=7% Similarity=0.277 Sum_probs=9.6
Q ss_pred EcCHHHHHHHHHCCC
Q 045356 102 CASPSEIQAVLALSV 116 (419)
Q Consensus 102 VaS~~E~~~a~~~G~ 116 (419)
+.|.++++.+.++|+
T Consensus 157 v~s~e~A~~a~~aGa 171 (336)
T 1ypf_A 157 VGTPEAVRELENAGA 171 (336)
T ss_dssp ECSHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 556666666666665
No 132
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=36.51 E-value=1.5e+02 Score=28.38 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=26.8
Q ss_pred eHHHHHHHHHHHHHhC-CCCceeeeeccCCc------HHHHHHHHHcCC-cEE
Q 045356 57 DLGVVISLYHQLISNL-PMVHPYYAVKCNPE------PAILETLAALGS-NFD 101 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~-~~~~i~~avKan~~------~~v~~~l~~~G~-g~~ 101 (419)
+++.-.+.++++++.+ ++..++ +++|.. ..+++.|.+.|+ .++
T Consensus 177 ~~~~d~~~v~avR~a~g~d~~l~--vDan~~~~~~~A~~~~~~l~~~~i~~iE 227 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGADVEIL--VDANQSLGRHDALAMLRILDEAGCYWFE 227 (389)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEE--EECTTCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHHcCCCceEE--EECCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 4566677777888777 355543 777762 345566666666 444
No 133
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=35.91 E-value=2.3e+02 Score=25.88 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=50.9
Q ss_pred HHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCc-----------EEEcCHHHHHHHHHCCCCCCcEEEcCCCCC----
Q 045356 65 YHQLISNLPMVHPYYAVKCNPEPAILETLAALGSN-----------FDCASPSEIQAVLALSVSPDRIIYANACKP---- 129 (419)
Q Consensus 65 i~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g-----------~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~---- 129 (419)
++++++..|.+.+.+.+. .+.-+..+...|+. ....+.+-+..+.+.|.. -..++-...+
T Consensus 170 l~~~~~~~p~~~~~~l~~---~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G~~--V~vWTv~t~d~~~~ 244 (292)
T 3mz2_A 170 ARFFYEKNPNFMFEAFVK---TKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERGVM--CMISTAPSDDKLST 244 (292)
T ss_dssp HHHHHHHCTTCCEEEECC---SHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTTBC--EEEECTTTGGGSSS
T ss_pred HHHHHHHCCCCeEEEEeC---CHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCCCE--EEEEeCCCcchhhh
Confidence 345556667766666553 23333444455531 111234456667777862 2344321111
Q ss_pred ----HHHHHHHHHCCCcEEEecCHHHHHHHHhH
Q 045356 130 ----VSHIKYAASVGVNLTTFDSIQELDKIRKW 158 (419)
Q Consensus 130 ----~~~l~~a~~~gi~~i~vdS~~el~~i~~~ 158 (419)
.++++.+++.|+..|.-|..+.+..+.+.
T Consensus 245 ~~~~~~~~~~L~~~GVDgIiTD~P~~l~~~L~~ 277 (292)
T 3mz2_A 245 PESRAEAYRMIIRQGVDIIESDRPIEVAEAISS 277 (292)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESCHHHHHHHHGG
T ss_pred ccccHHHHHHHHHcCCCEEEeCCHHHHHHHHHH
Confidence 35778888889887888888888877653
No 134
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.82 E-value=2.8e+02 Score=25.93 Aligned_cols=93 Identities=6% Similarity=-0.113 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhCCCCceeeeeccCC------------cHHHHHHHHHcCC-cEEEcC---------------HHHHHHHH
Q 045356 61 VISLYHQLISNLPMVHPYYAVKCNP------------EPAILETLAALGS-NFDCAS---------------PSEIQAVL 112 (419)
Q Consensus 61 l~~ni~~~~~~~~~~~i~~avKan~------------~~~v~~~l~~~G~-g~~VaS---------------~~E~~~a~ 112 (419)
+.+-++++++.. +..+. +|-++ ...+++.|.+.|+ .++|++ ..-+..++
T Consensus 197 ~~eiv~avr~~v-~~pv~--vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik 273 (340)
T 3gr7_A 197 LGEVIDAVREVW-DGPLF--VRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIR 273 (340)
T ss_dssp HHHHHHHHHHHC-CSCEE--EEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCceE--EEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHH
Confidence 566777777776 32222 33332 3678999999998 788863 12233444
Q ss_pred HCCCCCCcEEEcCCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhH
Q 045356 113 ALSVSPDRIIYANACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKW 158 (419)
Q Consensus 113 ~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~ 158 (419)
+. ++ -.++.+|...+.++.+.+++.| +..+.+. +.+...++.+.
T Consensus 274 ~~-~~-iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~ 323 (340)
T 3gr7_A 274 RE-AD-IPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARE 323 (340)
T ss_dssp HH-TT-CCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHH
T ss_pred HH-cC-CcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHH
Confidence 43 22 3577788888899999999887 6665554 34455555543
No 135
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.19 E-value=2.3e+02 Score=26.44 Aligned_cols=44 Identities=16% Similarity=0.239 Sum_probs=32.5
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCC
Q 045356 161 KCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGS 214 (419)
Q Consensus 161 ~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs 214 (419)
...|.+|+++..- ..-|.+.++..++++.+++.++.+ ||.|.|.
T Consensus 209 ~~pv~vRls~~~~--------~~~g~~~~~~~~la~~L~~~Gvd~--i~vs~g~ 252 (340)
T 3gr7_A 209 DGPLFVRISASDY--------HPDGLTAKDYVPYAKRMKEQGVDL--VDVSSGA 252 (340)
T ss_dssp CSCEEEEEESCCC--------STTSCCGGGHHHHHHHHHHTTCCE--EEEECCC
T ss_pred CCceEEEeccccc--------cCCCCCHHHHHHHHHHHHHcCCCE--EEEecCC
Confidence 6789999998521 223778889999999988888765 6777543
No 136
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=34.78 E-value=1.9e+02 Score=26.56 Aligned_cols=94 Identities=6% Similarity=-0.016 Sum_probs=57.2
Q ss_pred CCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHC---CCCeEEEEEecCCCCCC---CCCCCCC
Q 045356 117 SPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWH---PKCELLIRIKSPVDGGA---RYPLDSK 183 (419)
Q Consensus 117 ~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~---~~~~v~lRv~~~~~~g~---~~~~~sR 183 (419)
.+++++..|.- .++++.+.+-+.|+..+..+.+.+ ++++.+.. ....+.|-++.+.-... ...+...
T Consensus 166 ~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~~~~~~~vylSiDiDvlDp~~aPgtgtp~p 245 (306)
T 1pq3_A 166 SSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLIGKRQRPIHLSFDIDAFDPTLAPATGTPVV 245 (306)
T ss_dssp CGGGEEEESCCCCCHHHHHHHHHTTCEEECHHHHHHHCHHHHHHHHHHHHHSSSCCCEEEEEEGGGBCTTTCCSBSSCCS
T ss_pred CcccEEEEEcCCCCHHHHHHHHHcCCeEEEhHHHhhhCHHHHHHHHHHHHhhcCCCeEEEEEecCCcCccccCCCCCCCC
Confidence 45688887752 257788888888886544443322 22222221 23468887777642111 1223467
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
.|++..|+.++++.+... .++.|+..-
T Consensus 246 gGlt~~e~~~~l~~l~~~-~~vvg~Div 272 (306)
T 1pq3_A 246 GGLTYREGMYIAEEIHNT-GLLSALDLV 272 (306)
T ss_dssp SCBCHHHHHHHHHHHHTT-TCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHcC-CCEEEEEEE
Confidence 999999999999887543 357777654
No 137
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=34.74 E-value=1.7e+02 Score=28.13 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhC-CCCceeeeeccCCc------HHHHHHHHHcCC-cEEEc--CHHHHHHHHHCCCCCCcEEEcCCCCC
Q 045356 60 VVISLYHQLISNL-PMVHPYYAVKCNPE------PAILETLAALGS-NFDCA--SPSEIQAVLALSVSPDRIIYANACKP 129 (419)
Q Consensus 60 ~l~~ni~~~~~~~-~~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va--S~~E~~~a~~~G~~~~~Ii~~gp~k~ 129 (419)
...+.++++|+.+ +++.++ +.+|.. ..+++.|.+.|+ .++.- ..+.+..+++. .+ -.|.......+
T Consensus 198 ~~~e~v~avR~avG~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P~~d~~~~~~l~~~-~~-iPIa~dE~~~~ 273 (409)
T 3go2_A 198 NLRAHLEALRDGAGPDVEIL--LDLNFNAKPEGYLKILRELADFDLFWVEIDSYSPQGLAYVRNH-SP-HPISSCETLFG 273 (409)
T ss_dssp HHHHHHHHHHHHHCTTSEEE--EECTTCSCHHHHHHHHHHTTTSCCSEEECCCSCHHHHHHHHHT-CS-SCEEECTTCCH
T ss_pred HHHHHHHHHHHHhCCCCEEE--EECCCCCCHHHHHHHHHHHhhcCCeEEEeCcCCHHHHHHHHhh-CC-CCEEeCCCcCC
Confidence 3456788888887 466555 788872 345566666676 66643 45555555554 11 24666666666
Q ss_pred HHHHHHHHHCC-CcEEEec----CHHHHHHHHhHC
Q 045356 130 VSHIKYAASVG-VNLTTFD----SIQELDKIRKWH 159 (419)
Q Consensus 130 ~~~l~~a~~~g-i~~i~vd----S~~el~~i~~~~ 159 (419)
..+++.+++.| +..+++| .+.+..++++.+
T Consensus 274 ~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A 308 (409)
T 3go2_A 274 IREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFA 308 (409)
T ss_dssp HHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHH
Confidence 77777777655 4444554 455555555443
No 138
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=34.64 E-value=2.5e+02 Score=26.31 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=32.7
Q ss_pred CCCCeEEEEEecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeC
Q 045356 159 HPKCELLIRIKSPVDGGARYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIG 213 (419)
Q Consensus 159 ~~~~~v~lRv~~~~~~g~~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~g 213 (419)
.+...|++|+++... ..-|.+.++..++++.+++.++.+ ||.|.|
T Consensus 217 G~d~pV~vRls~~~~--------~~~g~~~~~~~~la~~L~~~Gvd~--i~vs~g 261 (349)
T 3hgj_A 217 PRELPLFVRVSATDW--------GEGGWSLEDTLAFARRLKELGVDL--LDCSSG 261 (349)
T ss_dssp CTTSCEEEEEESCCC--------STTSCCHHHHHHHHHHHHHTTCCE--EEEECC
T ss_pred cCCceEEEEeccccc--------cCCCCCHHHHHHHHHHHHHcCCCE--EEEecC
Confidence 346679999998531 234788899889998888888765 566643
No 139
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=34.56 E-value=1.3e+02 Score=26.74 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeeC--C--CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHIG--S--EATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~g--s--~~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
+++.++.+.+++.++.+.+++ .++ . ...+++...+.++.+++.++.++++|
T Consensus 47 ~~~~~~~~~l~~~gl~~~~~~-~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG 101 (290)
T 2qul_A 47 AKKRELKAVADDLGLTVMCCI-GLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLG 101 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE-EECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCceEEec-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 556667777778899998843 221 1 12355656677888888888888888
No 140
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=34.18 E-value=3e+02 Score=26.07 Aligned_cols=78 Identities=10% Similarity=0.021 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhCCCCceeeeeccCCc------HHHHHHHHHcCC-cEEE----cCHHHHHHHHHCCCCCCcEEEcCC
Q 045356 58 LGVVISLYHQLISNLPMVHPYYAVKCNPE------PAILETLAALGS-NFDC----ASPSEIQAVLALSVSPDRIIYANA 126 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~~~~i~~avKan~~------~~v~~~l~~~G~-g~~V----aS~~E~~~a~~~G~~~~~Ii~~gp 126 (419)
.+.-.+.++++++.+++..++ +.+|.. ..+++.|.+.|+ .+|- ...+.+..+++. . +-.|.....
T Consensus 176 ~~~d~~~v~avR~a~~~~~l~--vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~iPIa~dE~ 251 (385)
T 3i6e_A 176 HAFDIMRLELIARDFPEFRVR--VDYNQGLEIDEAVPRVLDVAQFQPDFIEQPVRAHHFELMARLRGL-T-DVPLLADES 251 (385)
T ss_dssp HHHHHHHHHHHHHHCTTSEEE--EECTTCCCGGGHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHTT-C-SSCEEESTT
T ss_pred HHHHHHHHHHHHHhCCCCeEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHHh-C-CCCEEEeCC
Confidence 344556677777777555544 677762 345666666665 5541 123444444332 1 123444444
Q ss_pred CCCHHHHHHHHHC
Q 045356 127 CKPVSHIKYAASV 139 (419)
Q Consensus 127 ~k~~~~l~~a~~~ 139 (419)
..+..+++.+++.
T Consensus 252 ~~~~~~~~~~~~~ 264 (385)
T 3i6e_A 252 VYGPEDMVRAAHE 264 (385)
T ss_dssp CCSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHc
Confidence 4455555555543
No 141
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=34.10 E-value=1.4e+02 Score=27.53 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=40.1
Q ss_pred CCcEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccC-CcHHHHHHHHHcCCcEEEcCH--------------H----HH
Q 045356 50 DEPFYV--LDLGVVISLYHQLISNLPMVHPYYAVKCN-PEPAILETLAALGSNFDCASP--------------S----EI 108 (419)
Q Consensus 50 ~tP~~v--~d~~~l~~ni~~~~~~~~~~~i~~avKan-~~~~v~~~l~~~G~g~~VaS~--------------~----E~ 108 (419)
+.|+-+ ++.+.++.-++. +..+.-.+-.. ..+.+++++.+.|+.+-+... . -+
T Consensus 115 ~vpiSIDT~~~~V~~aAl~a------Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i 188 (297)
T 1tx2_A 115 KLPISIDTYKAEVAKQAIEA------GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSI 188 (297)
T ss_dssp CSCEEEECSCHHHHHHHHHH------TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHH
T ss_pred CceEEEeCCCHHHHHHHHHc------CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHH
Confidence 555443 444445444433 44455555543 367778877788876666541 1 23
Q ss_pred HHHHHCCCCCCcEEEc
Q 045356 109 QAVLALSVSPDRIIYA 124 (419)
Q Consensus 109 ~~a~~~G~~~~~Ii~~ 124 (419)
+.+.++|+++++|++-
T Consensus 189 ~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 189 KIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHTTCCGGGEEEE
T ss_pred HHHHHcCCChhcEEEe
Confidence 4556678877778875
No 142
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=33.98 E-value=2.3e+02 Score=26.90 Aligned_cols=43 Identities=21% Similarity=0.166 Sum_probs=25.6
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE
Q 045356 57 DLGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD 101 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~ 101 (419)
+.+.-.+.++++++.++ +..+ .+.+|.. ..+++.|.+.|+ .++
T Consensus 176 ~~~~d~~~v~avR~a~g~~~~l--~vDan~~~~~~~A~~~~~~l~~~~i~~iE 226 (383)
T 3i4k_A 176 DPAEDTRRVAELAREVGDRVSL--RIDINARWDRRTALHYLPILAEAGVELFE 226 (383)
T ss_dssp CHHHHHHHHHHHHHTTTTTSEE--EEECTTCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 45566667777777775 3443 3677762 345566666665 444
No 143
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=33.89 E-value=1.6e+02 Score=26.71 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=38.9
Q ss_pred HHHHHHHHHc-CC--cEEEcCHHHHHHHHHC--CCCCCcEEEcCCCC-C--HHHHHHHHHCCCcEEEec
Q 045356 87 PAILETLAAL-GS--NFDCASPSEIQAVLAL--SVSPDRIIYANACK-P--VSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 87 ~~v~~~l~~~-G~--g~~VaS~~E~~~a~~~--G~~~~~Ii~~gp~k-~--~~~l~~a~~~gi~~i~vd 147 (419)
.++++.+.+. ++ .+|....+.++.++++ |. .|+..-... . ++.+..+.++|+.++...
T Consensus 67 ~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga---~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~ 132 (271)
T 2yci_X 67 EWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGH---AMINSTSADQWKMDIFFPMAKKYEAAIIGLT 132 (271)
T ss_dssp HHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSC---CEEEEECSCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCC---CEEEECCCCccccHHHHHHHHHcCCCEEEEe
Confidence 5677777764 64 8888999999999998 74 566532222 2 445666678888654433
No 144
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=33.82 E-value=2.7e+02 Score=25.21 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=38.2
Q ss_pred CCceeeeeccCCcHHHHHHHHHcCC-cEEE-----------cCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCC
Q 045356 74 MVHPYYAVKCNPEPAILETLAALGS-NFDC-----------ASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGV 141 (419)
Q Consensus 74 ~~~i~~avKan~~~~v~~~l~~~G~-g~~V-----------aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi 141 (419)
++++++. ++.++.+++.+.+.|+ .+.. .+.+=++.+++.. + -.++..|.+.++++...|.+.|+
T Consensus 135 Gf~Vlpy--~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~-~-vPVI~eGGI~TPsDAa~AmeLGA 210 (265)
T 1wv2_A 135 GFDVMVY--TSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEA-K-VPVLVDAGVGTASDAAIAMELGC 210 (265)
T ss_dssp TCEEEEE--ECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHC-S-SCBEEESCCCSHHHHHHHHHHTC
T ss_pred CCEEEEE--eCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcC-C-CCEEEeCCCCCHHHHHHHHHcCC
Confidence 5554421 4555777777777664 2222 3444444444431 1 23555666667777777777776
Q ss_pred cEEEecC
Q 045356 142 NLTTFDS 148 (419)
Q Consensus 142 ~~i~vdS 148 (419)
.-+.+.|
T Consensus 211 dgVlVgS 217 (265)
T 1wv2_A 211 EAVLMNT 217 (265)
T ss_dssp SEEEESH
T ss_pred CEEEECh
Confidence 5444433
No 145
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=33.64 E-value=1.5e+02 Score=28.62 Aligned_cols=79 Identities=10% Similarity=0.030 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEE----cCHHHHHHHHHCCCCCCcEEEcC
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDC----ASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~V----aS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++.-.+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++- ...+.+..+++. .+ -.|....
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~~-iPIa~dE 259 (412)
T 4e4u_A 184 LDRCELFCRRVREAVGSKADLL--FGTHGQMVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKH-TS-IPIATGE 259 (412)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEE--ECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHT-CS-SCEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCeEE--EECCCCCCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhh-CC-CCEEecC
Confidence 4556677788888874 55554 788862 345666666776 5552 134444444443 11 2345444
Q ss_pred CCCCHHHHHHHHHCC
Q 045356 126 ACKPVSHIKYAASVG 140 (419)
Q Consensus 126 p~k~~~~l~~a~~~g 140 (419)
...+..+++.+++.|
T Consensus 260 ~~~~~~~~~~~i~~~ 274 (412)
T 4e4u_A 260 RLTTKYEFHKLLQAG 274 (412)
T ss_dssp TCCHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHcC
Confidence 444555555555544
No 146
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=33.63 E-value=1.4e+02 Score=28.88 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhC-CCCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEcC
Q 045356 58 LGVVISLYHQLISNL-PMVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~-~~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++.-.+.++++|+.+ +++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. .+ -.|....
T Consensus 161 ~~~d~e~v~avR~avG~d~~L~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~~-iPIa~dE 236 (405)
T 3rr1_A 161 VDAAVARVAEIRSAFGNTVEFG--LDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAETYARLAAH-TH-LPIAAGE 236 (405)
T ss_dssp HHHHHHHHHHHHHTTGGGSEEE--EECCSCBCHHHHHHHHHHHGGGCCSCEECSSCCSSTHHHHHHHTT-CS-SCEEECT
T ss_pred HHHHHHHHHHHHHHhCCCceEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhc-CC-CCEEecC
Confidence 345566778888888 455555 788862 445677777776 66622 44555555554 21 2466666
Q ss_pred CCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCCCC
Q 045356 126 ACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHPKC 162 (419)
Q Consensus 126 p~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~~~ 162 (419)
...+..+++.+++.| +..+++| .+.+..++++.+...
T Consensus 237 ~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~ 279 (405)
T 3rr1_A 237 RMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAY 279 (405)
T ss_dssp TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHc
Confidence 667777888777654 4555554 366666666655433
No 147
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.98 E-value=61 Score=31.93 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=43.3
Q ss_pred eeccCCc------HHHHHHHHHcCC-cEEEcCH---------------------------HHHHHHHHC-CCCCCcEEEc
Q 045356 80 AVKCNPE------PAILETLAALGS-NFDCASP---------------------------SEIQAVLAL-SVSPDRIIYA 124 (419)
Q Consensus 80 avKan~~------~~v~~~l~~~G~-g~~VaS~---------------------------~E~~~a~~~-G~~~~~Ii~~ 124 (419)
.+|-.+. ..+++.+.+.|+ ++.|..- .-+..++++ +-+ -.|+-.
T Consensus 301 ~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~-iPVIg~ 379 (443)
T 1tv5_A 301 FVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQ-IPIIAS 379 (443)
T ss_dssp EEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTC-SCEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCC-CcEEEE
Confidence 4666653 346788888887 6666641 223333333 111 247778
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecC
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
|.+.+.++...++..|+..+.+.+
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqigr 403 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQLYS 403 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEESH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcH
Confidence 888899999999988877665554
No 148
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=32.89 E-value=1.6e+02 Score=27.22 Aligned_cols=55 Identities=22% Similarity=0.343 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCC--cEEEcCHHHHHHHHHCCCCCCcEEEc--CCCCCHHHHHHHHHCCCcEEE
Q 045356 87 PAILETLAALGS--NFDCASPSEIQAVLALSVSPDRIIYA--NACKPVSHIKYAASVGVNLTT 145 (419)
Q Consensus 87 ~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~--gp~k~~~~l~~a~~~gi~~i~ 145 (419)
.++++.+.+.++ .+|....+.++.++++|. .|+.. |. ..++-++.+.++|+.++.
T Consensus 93 ~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa---~iINdVsg~-~d~~m~~v~a~~~~~vVl 151 (294)
T 2dqw_A 93 LPVLEAVLSLGVPVSVDTRKPEVAEEALKLGA---HLLNDVTGL-RDERMVALAARHGVAAVV 151 (294)
T ss_dssp HHHHHHHHTTCSCEEEECSCHHHHHHHHHHTC---SEEECSSCS-CCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCCeEEEECCCHHHHHHHHHhCC---CEEEECCCC-CChHHHHHHHHhCCCEEE
Confidence 456666665464 899999999999999985 36643 33 567777888888876543
No 149
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=32.84 E-value=1.3e+02 Score=27.42 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCC--cEEEcCHHHHHHHHHCCCCCC------------------------------cEEEcCCCCCHHHHH
Q 045356 87 PAILETLAALGS--NFDCASPSEIQAVLALSVSPD------------------------------RIIYANACKPVSHIK 134 (419)
Q Consensus 87 ~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~~~~------------------------------~Ii~~gp~k~~~~l~ 134 (419)
..+++...+.|. .++|.|.+|++.+.++|. + .++-.|++.++++++
T Consensus 152 ~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Ga--d~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~ 229 (272)
T 3qja_A 152 VSMLDRTESLGMTALVEVHTEQEADRALKAGA--KVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLL 229 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--SEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHH
T ss_pred HHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCC--CEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHH
Q ss_pred HHHHCCCcEEEecC
Q 045356 135 YAASVGVNLTTFDS 148 (419)
Q Consensus 135 ~a~~~gi~~i~vdS 148 (419)
.+.+.|+.-+.|.|
T Consensus 230 ~l~~~GadgvlVGs 243 (272)
T 3qja_A 230 AYAGAGADAVLVGE 243 (272)
T ss_dssp HHHHTTCSEEEECH
T ss_pred HHHHcCCCEEEEcH
No 150
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=32.68 E-value=59 Score=30.23 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=17.0
Q ss_pred CHHHHHHHHHCCCcEEEecCH--HHHHHHHh
Q 045356 129 PVSHIKYAASVGVNLTTFDSI--QELDKIRK 157 (419)
Q Consensus 129 ~~~~l~~a~~~gi~~i~vdS~--~el~~i~~ 157 (419)
+-++++.|++.|+..+.+|++ ++++++.+
T Consensus 216 tl~e~~eAl~aGaDiImLDn~s~~~l~~av~ 246 (300)
T 3l0g_A 216 NISQVEESLSNNVDMILLDNMSISEIKKAVD 246 (300)
T ss_dssp SHHHHHHHHHTTCSEEEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECCCCHHHHHHHHH
Confidence 456777777777666566653 44444443
No 151
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=32.47 E-value=2.9e+02 Score=26.88 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEE----ee----C-CC-CCCHHHHHHHHHHHHHHHHHHHH----cCCCc-ceEEEeCCC
Q 045356 188 PEEVAHLLGAAQASGLAVIGVAF----HI----G-SE-ATNLDAFHAAIAEAKTVFETAAR----LGMTK-MRVLDIGGG 252 (419)
Q Consensus 188 ~ee~~~~l~~~~~~~l~l~Glh~----H~----g-s~-~~~~~~~~~~~~~~~~l~~~l~~----~g~~~-~~~ldiGGG 252 (419)
++.+.++.+.+++.|+.+. +-. |. | +- ..|++..+.+++..++.++..++ +| -+ .-.|=++.|
T Consensus 117 p~~f~~~~~~a~e~GL~l~-~n~n~Fshp~yk~G~alTnPD~~VR~~AI~h~k~~idia~~~G~~LG-s~~~~~lW~~DG 194 (424)
T 3p14_A 117 PRHFEKWVRWAKRHGLGLD-FNPTLFSHEKAKDGLTLAHPDQAIRQFWIDHCIASRKIGEYFGKELE-TPCLTNIWIPDG 194 (424)
T ss_dssp GGGGHHHHHHHHHHTCEEE-EECCCSSSGGGTTSCSTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEECCCCE
T ss_pred hhhHHHHHHHHHHcCCcee-eccCCCCChhhcCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeeEEEeCCCC
Confidence 4567777777788888888 432 31 2 22 34666666777777777776665 66 34 222223345
Q ss_pred CC-CCCCHHHHHHHHHHHHHhhCCCccCCCccEEEEcCc
Q 045356 253 FA-CNPGFHEAASIIKDAIQTYFPNETAAGHLSVISEPG 290 (419)
Q Consensus 253 ~~-~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~li~EpG 290 (419)
+. .+.++....+.+.++|.+.+...+.....++.+||=
T Consensus 195 ~kdyp~D~~~~~~rl~esL~eI~~~~~d~~~~r~aIE~K 233 (424)
T 3p14_A 195 YKDTPSDRLTPRKRLKESLDQIFAAEINEAYNLDAVESK 233 (424)
T ss_dssp ESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEECC
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHhhccCCcCceEEEecC
Confidence 44 222445555667777777765432222347888753
No 152
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=32.40 E-value=2.9e+02 Score=25.17 Aligned_cols=26 Identities=19% Similarity=0.386 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHHHHh--cCC--eEEEEEEe
Q 045356 186 ANPEEVAHLLGAAQA--SGL--AVIGVAFH 211 (419)
Q Consensus 186 i~~ee~~~~l~~~~~--~~l--~l~Glh~H 211 (419)
..|+++.++++.+++ +++ ...|+|+|
T Consensus 176 ~~P~~v~~lv~~l~~~~~~~~~~~l~~H~H 205 (293)
T 3ewb_X 176 TNPTEFGQLFQDLRREIKQFDDIIFASHCH 205 (293)
T ss_dssp CCHHHHHHHHHHHHHHCTTGGGSEEEEECB
T ss_pred CCHHHHHHHHHHHHHhcCCccCceEEEEeC
Confidence 367777777776654 222 24577777
No 153
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=32.38 E-value=1.8e+02 Score=26.54 Aligned_cols=56 Identities=18% Similarity=0.234 Sum_probs=40.5
Q ss_pred HHHHHHHHHc-CC--cEEEcCHHHHHHHHHCCCCCCcEEEcCC-CCCHHHHHHHHHCCCcEEE
Q 045356 87 PAILETLAAL-GS--NFDCASPSEIQAVLALSVSPDRIIYANA-CKPVSHIKYAASVGVNLTT 145 (419)
Q Consensus 87 ~~v~~~l~~~-G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~gp-~k~~~~l~~a~~~gi~~i~ 145 (419)
.++++.+.+. ++ .+|....+.++.++++|. .|+..-. ...++-++.+.++|+.++.
T Consensus 79 ~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa---~iINdvsg~~d~~~~~~~a~~~~~vVl 138 (282)
T 1aj0_A 79 IPVVEAIAQRFEVWISVDTSKPEVIRESAKVGA---HIINDIRSLSEPGALEAAAETGLPVCL 138 (282)
T ss_dssp HHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTC---CEEEETTTTCSTTHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCHHHHHHHHHhCCeEEE
Confidence 4567777654 64 899999999999999985 4665321 2556777888888887543
No 154
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=32.29 E-value=1.1e+02 Score=29.33 Aligned_cols=98 Identities=6% Similarity=0.039 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEcC
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++...+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. .+ -.|....
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l~--vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~-~~-iPIa~dE 259 (401)
T 3sbf_A 184 MDNTLTMFKSLREKYGNQFHIL--HDVHERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQ-SS-VSLGLGE 259 (401)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEE--EECTTCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTT-CC-CCEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCEEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhh-CC-CCEEeCC
Confidence 4456677888888884 55555 889972 456677777786 66622 34455555543 21 2466666
Q ss_pred CCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHC
Q 045356 126 ACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWH 159 (419)
Q Consensus 126 p~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~ 159 (419)
...+..+++.+++.| +..+++| .+.+..++++.+
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A 299 (401)
T 3sbf_A 260 LFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLC 299 (401)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHH
Confidence 677788888888765 4555554 466766666654
No 155
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=31.98 E-value=1.5e+02 Score=26.02 Aligned_cols=72 Identities=10% Similarity=0.107 Sum_probs=48.3
Q ss_pred cHHHHHHHHHcCC--cEEEcCHHHHHHHHHCCCCCCcEEEc--C-------CCCCHHHHHHHHHCCCcEEE---ecCHHH
Q 045356 86 EPAILETLAALGS--NFDCASPSEIQAVLALSVSPDRIIYA--N-------ACKPVSHIKYAASVGVNLTT---FDSIQE 151 (419)
Q Consensus 86 ~~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~--g-------p~k~~~~l~~a~~~gi~~i~---vdS~~e 151 (419)
..++++.+.+.|. ..+|.|.+|++.+.++|+ +-|..+ | ...+-+.++.+.+.++.++. +.+.++
T Consensus 118 l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Ga--d~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d 195 (229)
T 3q58_A 118 IDSLLTRIRLHGLLAMADCSTVNEGISCHQKGI--EFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYNTPAL 195 (229)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC--SEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCCSHHH
T ss_pred HHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCC--CEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCCCHHH
Confidence 4678888888886 889999999999999997 333221 1 01133556666555665442 457788
Q ss_pred HHHHHhHC
Q 045356 152 LDKIRKWH 159 (419)
Q Consensus 152 l~~i~~~~ 159 (419)
+.++.+.+
T Consensus 196 ~~~~~~~G 203 (229)
T 3q58_A 196 AANAIEHG 203 (229)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 88877664
No 156
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=31.89 E-value=1.8e+02 Score=27.11 Aligned_cols=96 Identities=18% Similarity=0.235 Sum_probs=58.4
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCH----HH-HHHHHhH-CCCCeEEEEEecCCCCCC---CCCCCCCCC
Q 045356 116 VSPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSI----QE-LDKIRKW-HPKCELLIRIKSPVDGGA---RYPLDSKFG 185 (419)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~----~e-l~~i~~~-~~~~~v~lRv~~~~~~g~---~~~~~sRfG 185 (419)
+.++++++.|-- .++++.+++-+.|+..+..+.+ ++ ++++.+. .....+.|-++++.-..+ ...+....|
T Consensus 174 ~~~~~~v~iGiR~~~~~e~~~~~~~gi~~~~~~ei~~g~~~v~~~~~~~l~~~~~vylS~DiDvLDpa~aPgtgtP~pgG 253 (330)
T 4g3h_A 174 IDPKCLVYFGVRSTEQSERDVIRELQIPLFSVDAIRENMQEVVQKTKESLKAVDIIYLSLDLDIMDGKLFTSTGVRENNG 253 (330)
T ss_dssp CCGGGEEEESCCBCCHHHHHHHHHHTCCEECHHHHHHCHHHHHHHHHHHHTTCSEEEEEEEGGGBCTTTCCSSSSCCSSC
T ss_pred CCcccEEEEecCCCCHHHHHHHHHcCCeEEEHHHhhcCHHHHHHHHHHHhcCCCeEEEEEecCcCChhhCCCCCCCCCCC
Confidence 456788887642 2577888888889875544332 00 2233332 223567787777641111 123346889
Q ss_pred CCHHHHHHHHHHHHhc-CCeEEEEEEe
Q 045356 186 ANPEEVAHLLGAAQAS-GLAVIGVAFH 211 (419)
Q Consensus 186 i~~ee~~~~l~~~~~~-~l~l~Glh~H 211 (419)
++..|+.++++.+... +.++.|+..-
T Consensus 254 lt~~e~~~il~~l~~~~~~~vvg~Div 280 (330)
T 4g3h_A 254 LSFDELKQLLGLLLESFKDRLKAVEVT 280 (330)
T ss_dssp BCHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCEEEEEEE
Confidence 9999999999887641 3567777654
No 157
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=31.26 E-value=1.2e+02 Score=28.20 Aligned_cols=90 Identities=14% Similarity=0.053 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhCC------CCceeeeeccCCc------HHHHHHHHHcCC-cEEEcCH-------------------
Q 045356 58 LGVVISLYHQLISNLP------MVHPYYAVKCNPE------PAILETLAALGS-NFDCASP------------------- 105 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~------~~~i~~avKan~~------~~v~~~l~~~G~-g~~VaS~------------------- 105 (419)
.+.+.+-++.+++..+ +-.+-..+|-.+. ..+++.+.+.|+ ++.|+.-
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~ 266 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGL 266 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEE
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCc
Confidence 3444555566665431 0012233676653 567888889998 7777521
Q ss_pred ----------HHHHHHHHC-CCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 106 ----------SEIQAVLAL-SVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 106 ----------~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
.-+..+++. +-+ -.|+..|.+.+.+++..+++.|+..+.+.+
T Consensus 267 ~g~~~~~~~~~~i~~i~~~~~~~-ipVi~~GGI~~~~da~~~l~~GAd~V~igr 319 (336)
T 1f76_A 267 SGRPLQLKSTEIIRRLSLELNGR-LPIIGVGGIDSVIAAREKIAAGASLVQIYS 319 (336)
T ss_dssp EEGGGHHHHHHHHHHHHHHHTTS-SCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred CCchhHHHHHHHHHHHHHHhCCC-CCEEEECCCCCHHHHHHHHHCCCCEEEeeH
Confidence 222233332 101 247778888899999999888887665554
No 158
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=31.21 E-value=1.9e+02 Score=27.62 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHH
Q 045356 185 GANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKT 231 (419)
Q Consensus 185 Gi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~ 231 (419)
-.+++.+.++++.+.+. .....|.=..|. ..|..+.+.++.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~--~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 141 RSEEQDLLAVYEAVAPY-VDRVGLADTVGV--ATPRQVYALVREVRR 184 (382)
T ss_dssp TSCHHHHHHHHHHHGGG-CSEEEEEETTSC--CCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh-cCEEEecCCCCC--CCHHHHHHHHHHHHH
Confidence 35677788888777666 666666555444 456666555555443
No 159
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=30.84 E-value=2.2e+02 Score=27.13 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhcCCeEE
Q 045356 189 EEVAHLLGAAQASGLAVI 206 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~ 206 (419)
.++.++++.++..++.+.
T Consensus 296 t~~~~i~~~A~~~gi~~~ 313 (393)
T 2og9_A 296 TPFLKIASLAEHAGLMLA 313 (393)
T ss_dssp HHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHcCCEEe
Confidence 455666666666777766
No 160
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=30.66 E-value=1.3e+02 Score=28.12 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHh-cCCeEEEEEEee
Q 045356 187 NPEEVAHLLGAAQA-SGLAVIGVAFHI 212 (419)
Q Consensus 187 ~~ee~~~~l~~~~~-~~l~l~Glh~H~ 212 (419)
.|+++.++++.+++ .++ ..++|+|-
T Consensus 170 ~P~~~~~lv~~l~~~~~~-~i~~H~Hn 195 (320)
T 3dxi_A 170 TPKEVKNLLKEVRKYTHV-PVGFHGHD 195 (320)
T ss_dssp CHHHHHHHHHHHHHHCCS-CEEEECBC
T ss_pred CHHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 68888899888765 455 45788884
No 161
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=30.60 E-value=3e+02 Score=25.99 Aligned_cols=98 Identities=10% Similarity=0.034 Sum_probs=53.0
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCCc------HHHHHHHHHcCC-cEEE----cCHHHHHHHHHCCCCCCcEEEcC
Q 045356 57 DLGVVISLYHQLISNLPMVHPYYAVKCNPE------PAILETLAALGS-NFDC----ASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~~~~i~~avKan~~------~~v~~~l~~~G~-g~~V----aS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
+.+...+.++++++.++ .+...+++|.. ..+++.+.+.|+ .++- ...+.+..+++. .+ -.|...+
T Consensus 173 ~~~~~~e~v~avr~a~g--d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~~-iPI~~de 248 (384)
T 2pgw_A 173 GEKLDLEITAAVRGEIG--DARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREK-VG-IPIVADQ 248 (384)
T ss_dssp CHHHHHHHHHHHHTTST--TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-CS-SCEEEST
T ss_pred CHHHHHHHHHHHHHHcC--CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhh-CC-CCEEEeC
Confidence 45666778888888776 33345777762 345666666676 4442 133444444432 11 2355555
Q ss_pred CCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhH
Q 045356 126 ACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKW 158 (419)
Q Consensus 126 p~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~ 158 (419)
...+.++++.+++.+ +..+.++ .+.+..++.+.
T Consensus 249 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 287 (384)
T 2pgw_A 249 AAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAV 287 (384)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHH
Confidence 555666666666554 3444443 44444444443
No 162
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=30.35 E-value=2.2e+02 Score=26.99 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=41.9
Q ss_pred HHHHHHHHcCCcEEEcC------HHHHHHHHHCCCCCCcEEEcC--CCCCHHHHHHHHHCCCcEEEecC
Q 045356 88 AILETLAALGSNFDCAS------PSEIQAVLALSVSPDRIIYAN--ACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 88 ~v~~~l~~~G~g~~VaS------~~E~~~a~~~G~~~~~Ii~~g--p~k~~~~l~~a~~~gi~~i~vdS 148 (419)
+.+++..+.|+.+-+-+ .+.++.+++.|.+++++++.. ...+.+.++.+++.|+. +.+|.
T Consensus 197 A~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~y-l~fD~ 264 (360)
T 3tn4_A 197 AAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVY-IAFDR 264 (360)
T ss_dssp HHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCE-EEECC
T ss_pred HHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCE-EEEcc
Confidence 34455556687666644 366888889999998888743 23467788889999974 57763
No 163
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=30.29 E-value=1.4e+02 Score=27.31 Aligned_cols=95 Identities=7% Similarity=0.096 Sum_probs=57.5
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCHHH------HHHHHh-HC-CCCeEEEEEecCCCCCCC---CCCCCC
Q 045356 116 VSPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSIQE------LDKIRK-WH-PKCELLIRIKSPVDGGAR---YPLDSK 183 (419)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~-~~-~~~~v~lRv~~~~~~g~~---~~~~sR 183 (419)
+.+.++++.|.- .++++.+.+-+.|+..+..+.+.+ ++.+.+ +. ...++.|-++.+.-..+. ..+...
T Consensus 164 ~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~l~~~~~~~~~vylSiDiDvlDp~~aPgtgtp~p 243 (299)
T 2cev_A 164 IKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERTDGVHLSLDLDGLDPSDAPGVGTPVI 243 (299)
T ss_dssp SCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGBCTTTCCCCSSCCS
T ss_pred CCccceEEEECCCCCHHHHHHHHHcCCeEEEHHHHhhcCHHHHHHHHHHHhccCCCeEEEEEccCccChhhcCCCCCCCC
Confidence 345678776542 256778888888887655554433 222222 22 245788887776421111 223468
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
.|++..|+.++++.+... .++.|+..-
T Consensus 244 gGlt~~e~~~~l~~l~~~-~~vvg~Div 270 (299)
T 2cev_A 244 GGLTYRESHLAMEMLAEA-QIITSAEFV 270 (299)
T ss_dssp SCBCHHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHhcC-CCEEEEEEE
Confidence 999999999999887543 357776554
No 164
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=30.18 E-value=3.1e+02 Score=24.81 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=0.0
Q ss_pred CHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHH----HCCCcEE-EecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 045356 104 SPSEIQAVLALSVSPDRIIYANACKPVSHIKYAA----SVGVNLT-TFDSIQELDKIRKWHPKCELLIRIKSPVDGGARY 178 (419)
Q Consensus 104 S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~----~~gi~~i-~vdS~~el~~i~~~~~~~~v~lRv~~~~~~g~~~ 178 (419)
+..++..++.+|. +.|++.....+.++++..+ +.|...+ -+.+.+|+++..+.... .|-+|.-.-
T Consensus 131 d~~qi~ea~~~GA--D~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~---iIGinnr~l----- 200 (272)
T 3tsm_A 131 DPYQVYEARSWGA--DCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSR---LLGVNNRNL----- 200 (272)
T ss_dssp STHHHHHHHHTTC--SEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCS---EEEEECBCT-----
T ss_pred CHHHHHHHHHcCC--CEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCC---EEEECCCCC-----
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHH
Q 045356 179 PLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIA 227 (419)
Q Consensus 179 ~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~ 227 (419)
..|+++.+...++++.+...-..+.. |.+.+++......+
T Consensus 201 ---~t~~~dl~~~~~L~~~ip~~~~vIae------sGI~t~edv~~l~~ 240 (272)
T 3tsm_A 201 ---RSFEVNLAVSERLAKMAPSDRLLVGE------SGIFTHEDCLRLEK 240 (272)
T ss_dssp ---TTCCBCTHHHHHHHHHSCTTSEEEEE------SSCCSHHHHHHHHT
T ss_pred ---ccCCCChHHHHHHHHhCCCCCcEEEE------CCCCCHHHHHHHHH
No 165
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=30.12 E-value=3.1e+02 Score=24.73 Aligned_cols=13 Identities=0% Similarity=0.025 Sum_probs=6.7
Q ss_pred eHHHHHHHHHHHH
Q 045356 57 DLGVVISLYHQLI 69 (419)
Q Consensus 57 d~~~l~~ni~~~~ 69 (419)
+.+.+.+..+.+.
T Consensus 109 ~~~~~~~~a~~~~ 121 (311)
T 1ep3_A 109 EEADYVAVCAKIG 121 (311)
T ss_dssp SHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHh
Confidence 4555555555554
No 166
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=30.09 E-value=3.2e+02 Score=25.00 Aligned_cols=102 Identities=14% Similarity=0.075 Sum_probs=61.2
Q ss_pred HHHHHH-CCCCCCcEEEcCCCC---CHHHHHHHHHCCCcEEEecCHHH-HHHHHhHC-CCCeEEEEEecCCCCCC---CC
Q 045356 108 IQAVLA-LSVSPDRIIYANACK---PVSHIKYAASVGVNLTTFDSIQE-LDKIRKWH-PKCELLIRIKSPVDGGA---RY 178 (419)
Q Consensus 108 ~~~a~~-~G~~~~~Ii~~gp~k---~~~~l~~a~~~gi~~i~vdS~~e-l~~i~~~~-~~~~v~lRv~~~~~~g~---~~ 178 (419)
+..+.+ .+.- ++++..|.-. ++++.+.+-+.|+..+..+.+.+ ++.+.+.. ....+.|-++.+.-..+ ..
T Consensus 163 ~~~~~~~~~~~-~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~~~~v~~~~~~~~~vylSiDiDvlDpa~aPgt 241 (305)
T 1woh_A 163 FRRACEALPNL-VHITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGT 241 (305)
T ss_dssp HHHHHHHCTTE-EEEEEEEECCSCCCHHHHHHHHHTTCEEEEHHHHHHCHHHHHTTSCCSSEEEEEEEGGGBCTTTCCCB
T ss_pred HHHHhhccCCC-CcEEEEEeCCCCCCHHHHHHHHHcCCeEEEHHHHHHHHHHHHHHhhCCCcEEEEEeecCCChhhCCCC
Confidence 445555 4421 2677665432 57888998899987555444332 23333322 23467777776642111 12
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 179 PLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 179 ~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
.+....|++..|+.++++.+.+. .++.|+..-
T Consensus 242 gtp~pgGlt~~e~~~~l~~l~~~-~~vvg~Div 273 (305)
T 1woh_A 242 SSPEPDGLTYAQGMKILAAAAAN-NTVVGLDLV 273 (305)
T ss_dssp SSCCSSCBCHHHHHHHHHHHHHH-SEEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHhcc-CCEEEEEEE
Confidence 34478999999999999887543 467777654
No 167
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=30.07 E-value=2.9e+02 Score=24.45 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=25.6
Q ss_pred HHHHHHHHHcC--CcEEEcCHHHHHHHHHCCCCCCcEEEcCCC
Q 045356 87 PAILETLAALG--SNFDCASPSEIQAVLALSVSPDRIIYANAC 127 (419)
Q Consensus 87 ~~v~~~l~~~G--~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~ 127 (419)
...+|.+...+ +|..|.|.+|+..+.+.|. +++..||.
T Consensus 125 ~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~Ga---DyI~vgpv 164 (243)
T 3o63_A 125 VNVARQILAPDTLIGRSTHDPDQVAAAAAGDA---DYFCVGPC 164 (243)
T ss_dssp HHHHHHHSCTTCEEEEEECSHHHHHHHHHSSC---SEEEECCS
T ss_pred HHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCC---CEEEEcCc
Confidence 44455554333 3889999999999999886 34555553
No 168
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=29.94 E-value=1.3e+02 Score=26.91 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=34.8
Q ss_pred HHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe
Q 045356 191 VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDI 249 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldi 249 (419)
+.++.+.+++.+|.+..++ ++. ..+++...+.++.+++.++.++++| .+.-.+..
T Consensus 57 ~~~~~~~l~~~gl~~~~~~--~~~-~~~~~~~~~~~~~~~~~i~~a~~lG-~~~v~~~~ 111 (301)
T 3cny_A 57 PEKLNYELKLRNLEIAGQW--FSS-YIIRDGIEKASEAFEKHCQYLKAIN-APVAVVSE 111 (301)
T ss_dssp HHHHHHHHHHTTCEECEEE--EEE-CHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEe--ccC-CCChhhHHHHHHHHHHHHHHHHHcC-CCEEEecC
Confidence 3445555677899998873 322 1234445566778888888888888 44433443
No 169
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=29.81 E-value=3.4e+02 Score=26.10 Aligned_cols=16 Identities=0% Similarity=0.138 Sum_probs=8.4
Q ss_pred EEcCHHHHHHHHHCCC
Q 045356 101 DCASPSEIQAVLALSV 116 (419)
Q Consensus 101 ~VaS~~E~~~a~~~G~ 116 (419)
.|.|.+|++.+.++|.
T Consensus 191 ~V~t~e~A~~a~~aGA 206 (400)
T 3ffs_A 191 NVVTEEATKELIENGA 206 (400)
T ss_dssp EECSHHHHHHHHHTTC
T ss_pred ecCCHHHHHHHHHcCC
Confidence 3455555555555554
No 170
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=29.58 E-value=91 Score=30.35 Aligned_cols=101 Identities=6% Similarity=0.116 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHC-CCCCCcEEEc
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLAL-SVSPDRIIYA 124 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~-G~~~~~Ii~~ 124 (419)
++...+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. ++ .|...
T Consensus 209 ~~~d~e~v~avR~avG~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~d 283 (424)
T 3v3w_A 209 LNYIPDVFAAVRKEFGPDIHLL--HDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTT---PLAVG 283 (424)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--EECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCS---CEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCcEE--EeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCC---CEEEc
Confidence 4556777888898884 55555 788872 456677777786 56522 34455555443 22 46666
Q ss_pred CCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCCCCe
Q 045356 125 NACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHPKCE 163 (419)
Q Consensus 125 gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~~~~ 163 (419)
....+..+++.+++.| +..++++ .+.+..++++.+....
T Consensus 284 E~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~g 328 (424)
T 3v3w_A 284 EVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFH 328 (424)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTT
T ss_pred cCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcC
Confidence 6666677777777655 4455554 3566666666554433
No 171
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=28.16 E-value=1.5e+02 Score=26.04 Aligned_cols=70 Identities=16% Similarity=0.129 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCC-cEEEcC-----------HHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC-----H
Q 045356 87 PAILETLAALGS-NFDCAS-----------PSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS-----I 149 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~VaS-----------~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS-----~ 149 (419)
..+++.+.+.|+ .+.+.. .+.++.+++. +. -+++..|...+.++++.+++.|+..+.+.+ .
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~-ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp 115 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TT-LPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENP 115 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-CC-SCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCT
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-CC-CCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhCh
Confidence 467777777776 454432 2334444443 22 358888999999999999999988666654 3
Q ss_pred HHHHHHHhH
Q 045356 150 QELDKIRKW 158 (419)
Q Consensus 150 ~el~~i~~~ 158 (419)
+.+.++.+.
T Consensus 116 ~~~~~~~~~ 124 (247)
T 3tdn_A 116 SLITQIAQT 124 (247)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 445555544
No 172
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=27.85 E-value=63 Score=29.07 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=26.8
Q ss_pred HHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcE--EEecCHHHHHHHHhHC
Q 045356 112 LALSVSPDRIIYANACKPVSHIKYAASVGVNL--TTFDSIQELDKIRKWH 159 (419)
Q Consensus 112 ~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~--i~vdS~~el~~i~~~~ 159 (419)
.+.|+.+.-+.......+++.++.+-+.|+.+ .+|++.++++++.+.+
T Consensus 208 ~~~~~~~~~i~~~~~~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~l~~~G 257 (272)
T 3ch0_A 208 EKLSFTPAVYSPDVTLVSKKDIDAAHKLGMRVIPWTVNTKEEIETLISLG 257 (272)
T ss_dssp TTSSSCCSEEEEBGGGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHT
T ss_pred HHcCCCCcEEccchhhcCHHHHHHHHHcCCEEEEeccCCHHHHHHHHHcC
Confidence 34454334344333344566667776677542 2667777777666553
No 173
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=27.65 E-value=3.6e+02 Score=24.72 Aligned_cols=37 Identities=14% Similarity=0.228 Sum_probs=22.2
Q ss_pred CcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHH
Q 045356 98 SNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138 (419)
Q Consensus 98 ~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (419)
+.++|.|++|++.+.++|. +.|.+ .+ .+.++++.+++
T Consensus 211 I~vev~tlee~~eA~~aGa--D~I~l-d~-~~~e~l~~~v~ 247 (296)
T 1qap_A 211 VEVEVENLDELDDALKAGA--DIIML-DN-FNTDQMREAVK 247 (296)
T ss_dssp EEEEESSHHHHHHHHHTTC--SEEEE-SS-CCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHcCC--CEEEE-CC-CCHHHHHHHHH
Confidence 3667777777777777764 33333 33 35666666654
No 174
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=27.59 E-value=1.9e+02 Score=26.81 Aligned_cols=94 Identities=9% Similarity=0.046 Sum_probs=57.4
Q ss_pred CCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHC---CCCeEEEEEecCCCCCC---CCCCCCC
Q 045356 117 SPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWH---PKCELLIRIKSPVDGGA---RYPLDSK 183 (419)
Q Consensus 117 ~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~---~~~~v~lRv~~~~~~g~---~~~~~sR 183 (419)
.++++++.|.- .++++.+.+-+.|+..+..+.+.+ ++++.+.. ....+.|-++.+.-..+ ...+...
T Consensus 170 ~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~~~~~~~vylSiDiDvLDpa~aPgtgtp~p 249 (322)
T 2aeb_A 170 SAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVV 249 (322)
T ss_dssp CGGGEEEEEECCCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHHSSSCCCEEEEEEGGGBCTTTCCSBSSCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCCEEEEHHHHHhhCHHHHHHHHHHHHhhcCCCeEEEEEecCcCCccccCCCCCCCC
Confidence 35677776542 257888888888887655554432 22333322 23467887777642111 1234478
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
.|++..|+.++++.+... .++.|+..-
T Consensus 250 gGlt~~e~~~~l~~l~~~-~~vvg~Div 276 (322)
T 2aeb_A 250 GGLTYREGLYITEEIYKT-GLLSGLDIM 276 (322)
T ss_dssp SCBCHHHHHHHHHHHHHH-SCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHcc-CCEEEEEEE
Confidence 999999999999887643 347777654
No 175
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=27.53 E-value=2.5e+02 Score=22.91 Aligned_cols=10 Identities=40% Similarity=0.753 Sum_probs=4.2
Q ss_pred HHHHHHHcCC
Q 045356 89 ILETLAALGS 98 (419)
Q Consensus 89 v~~~l~~~G~ 98 (419)
+++.|.+.|+
T Consensus 76 ~L~~L~~~G~ 85 (187)
T 2wm8_A 76 VLKRLQSLGV 85 (187)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHCCc
Confidence 3444444444
No 176
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=27.44 E-value=3.2e+02 Score=25.78 Aligned_cols=81 Identities=9% Similarity=-0.004 Sum_probs=45.5
Q ss_pred HHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEcC------------HHHHHHHHHCCCCCCcEEEcCCCCCHH
Q 045356 65 YHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCAS------------PSEIQAVLALSVSPDRIIYANACKPVS 131 (419)
Q Consensus 65 i~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS------------~~E~~~a~~~G~~~~~Ii~~gp~k~~~ 131 (419)
++++++..+ .. ..+|--.+++.++.+.+.|+ ++.|++ ..-+..+.+.=-..-.++..|.+.+.+
T Consensus 217 i~~l~~~~~-~p--v~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~ 293 (370)
T 1gox_A 217 VAWLQTITS-LP--ILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGT 293 (370)
T ss_dssp HHHHHHHCC-SC--EEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHH
T ss_pred HHHHHHHhC-CC--EEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHH
Confidence 555555542 22 33566666777777888887 677744 111222222100012466677777777
Q ss_pred HHHHHHHCCCcEEEecC
Q 045356 132 HIKYAASVGVNLTTFDS 148 (419)
Q Consensus 132 ~l~~a~~~gi~~i~vdS 148 (419)
++..++..|+..+.+.+
T Consensus 294 D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 294 DVFKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHTCSEEEECH
T ss_pred HHHHHHHcCCCEEeecH
Confidence 77777777776555554
No 177
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=27.41 E-value=1.1e+02 Score=26.85 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=13.8
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeeC
Q 045356 187 NPEEVAHLLGAAQASGLAVIGVAFHIG 213 (419)
Q Consensus 187 ~~ee~~~~l~~~~~~~l~l~Glh~H~g 213 (419)
+.+++.++++.++..+-. .|+.+-.|
T Consensus 140 ~~~~~~~ll~~v~~~~~~-vg~~~D~g 165 (264)
T 1yx1_A 140 RIEVLERFFRLAERQQLD-LAMTFDIG 165 (264)
T ss_dssp CHHHHHHHHHHHHHTTCS-EEEEEETT
T ss_pred CHHHHHHHHHHHHhcCCC-eEEEEehh
Confidence 455566666655443334 56665443
No 178
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=27.24 E-value=2.1e+02 Score=27.48 Aligned_cols=78 Identities=8% Similarity=0.033 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc-----CHHHHHHHHHC-CCCCCcEEE
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA-----SPSEIQAVLAL-SVSPDRIIY 123 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va-----S~~E~~~a~~~-G~~~~~Ii~ 123 (419)
++.-.+.++++|+.++ ++.++ +-+|.. ..+++.|.+.|+ .+|-- ....+..+++. ++ .|..
T Consensus 196 ~~~d~e~v~avR~a~g~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~i---PIa~ 270 (410)
T 3dip_A 196 LKDGLEPFRKIRAAVGQRIEIM--CELHSLWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQTRA---PICG 270 (410)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEE--EECTTCBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCC---CEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhCCC---CEEe
Confidence 3455677888888886 55554 788862 334555556666 56632 33444443332 22 2444
Q ss_pred cCCCCCHHHHHHHHHCC
Q 045356 124 ANACKPVSHIKYAASVG 140 (419)
Q Consensus 124 ~gp~k~~~~l~~a~~~g 140 (419)
.....+..+++.+++.|
T Consensus 271 dE~~~~~~~~~~~l~~~ 287 (410)
T 3dip_A 271 GENLAGTRRFHEMLCAD 287 (410)
T ss_dssp CTTCCSHHHHHHHHHTT
T ss_pred cCCcCCHHHHHHHHHcC
Confidence 44444455555555443
No 179
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=27.22 E-value=2.2e+02 Score=26.72 Aligned_cols=24 Identities=8% Similarity=0.216 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEee
Q 045356 188 PEEVAHLLGAAQASGLAVIGVAFHI 212 (419)
Q Consensus 188 ~ee~~~~l~~~~~~~l~l~Glh~H~ 212 (419)
..++.++++.++..++.+. +|+++
T Consensus 271 it~~~~i~~~A~~~gi~~~-~~~~~ 294 (354)
T 3jva_A 271 IHEALKINQICETAGIECM-IGCMA 294 (354)
T ss_dssp HHHHHHHHHHHHHTTCEEE-ECCCT
T ss_pred HHHHHHHHHHHHHcCCeEE-ecCCC
Confidence 3466777777777888776 67776
No 180
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=27.12 E-value=3.8e+02 Score=25.05 Aligned_cols=87 Identities=13% Similarity=0.100 Sum_probs=50.3
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccC--C--------cHHHHHHHHHcCC-cEEEcC-------------------HH
Q 045356 57 DLGVVISLYHQLISNLPMVHPYYAVKCN--P--------EPAILETLAALGS-NFDCAS-------------------PS 106 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~~~~i~~avKan--~--------~~~v~~~l~~~G~-g~~VaS-------------------~~ 106 (419)
+.+.+.+-++++++.. +..+. +|.. . ...+++.+.+.|+ .+.|.. .+
T Consensus 110 ~~~~~~eiv~av~~~v-~~PV~--vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~ 186 (350)
T 3b0p_A 110 DLARVREILKAMGEAV-RVPVT--VKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHD 186 (350)
T ss_dssp CHHHHHHHHHHHHHHC-SSCEE--EEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHH
T ss_pred CHHHHHHHHHHHHHHh-CCceE--EEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHH
Confidence 4556777777787765 22222 3321 1 2567788888887 676654 11
Q ss_pred HHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecC
Q 045356 107 EIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 107 E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS 148 (419)
-+..+++. ++.-.|+.+|.+.+.+++..+++ |+..+.+.+
T Consensus 187 ~i~~ik~~-~~~iPVianGgI~s~eda~~~l~-GaD~V~iGR 226 (350)
T 3b0p_A 187 WVHRLKGD-FPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGR 226 (350)
T ss_dssp HHHHHHHH-CTTSEEEEESSCCSHHHHHHHHT-TSSEEEECH
T ss_pred HHHHHHHh-CCCCeEEEECCcCCHHHHHHHHh-CCCEEEECH
Confidence 12233332 21135777777777888887776 676555543
No 181
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=27.11 E-value=3.8e+02 Score=25.26 Aligned_cols=27 Identities=15% Similarity=0.412 Sum_probs=12.9
Q ss_pred EEEcCCCCCHHHHHHHHHCCCcEEEec
Q 045356 121 IIYANACKPVSHIKYAASVGVNLTTFD 147 (419)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gi~~i~vd 147 (419)
|+..|.+.+..++..++..|+..+.+.
T Consensus 287 Via~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 287 IVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp EEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 444455555555555555554433333
No 182
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=26.95 E-value=1.2e+02 Score=29.71 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHC-CCCCCcEEEc
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLAL-SVSPDRIIYA 124 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~-G~~~~~Ii~~ 124 (419)
++...+.++++|+.++ ++.+ .+.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. ++ .|...
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~i---PIa~d 297 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVEL--LHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSST---PIAMG 297 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEE--EEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCS---CEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCeE--EEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCC---CEEeC
Confidence 4556677888888884 5554 4899972 345566666676 56522 23344444443 32 46666
Q ss_pred CCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHC
Q 045356 125 NACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWH 159 (419)
Q Consensus 125 gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~ 159 (419)
....+..+++.+++.+ +..++++ .+.+..++++.+
T Consensus 298 E~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A 338 (440)
T 3t6c_A 298 ELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYS 338 (440)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHH
Confidence 6666777777777655 4444444 456666665554
No 183
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1
Probab=26.87 E-value=2.4e+02 Score=26.33 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=57.4
Q ss_pred CCCCcEEEcCCC---CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHC-CCCeEEEEEecCCCCCC---CCCCCC
Q 045356 116 VSPDRIIYANAC---KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWH-PKCELLIRIKSPVDGGA---RYPLDS 182 (419)
Q Consensus 116 ~~~~~Ii~~gp~---k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~-~~~~v~lRv~~~~~~g~---~~~~~s 182 (419)
..+.+++..|.- .+.++.+.+-+.|+..+..+.+.+ ++++.+.. ....+.|-++.+.-..+ ...+..
T Consensus 191 ~~~~~~~~iGiR~~~~~~~~~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~~l~~~~~vylSiDiDvLDpa~aPgtgtp~ 270 (336)
T 1xfk_A 191 GWDFHYACLGVSRASNTPALFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASAPGVSAPA 270 (336)
T ss_dssp TCCCEEEEEEECTTTSCHHHHHHHHHTTCEEEEGGGCSTTTHHHHHHHHHHHHHTCSEEEEEEEGGGSBTTTCCSSSSCB
T ss_pred CCCceEEEEEeCCCCCCHHHHHHHHHcCCEEEEHHHHHhcCHHHHHHHHHHHhcCCCeEEEEEeeccCChhcCCCCCCCC
Confidence 345677776642 245678888888987665554321 23333321 23467777776542111 123347
Q ss_pred CCCCCHHHHHHHHHHH-HhcCCeEEEEEEe
Q 045356 183 KFGANPEEVAHLLGAA-QASGLAVIGVAFH 211 (419)
Q Consensus 183 RfGi~~ee~~~~l~~~-~~~~l~l~Glh~H 211 (419)
..|++..|+.++++.+ .. +.++.|+..-
T Consensus 271 pgGlt~~e~~~~l~~l~~~-~~~vvg~Div 299 (336)
T 1xfk_A 271 ARGVSLEALAPYFDRILHY-KNKLMIADIA 299 (336)
T ss_dssp SSCCCHHHHHHHHHHHHHC-TTTEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHhC-CCCEEEEEEE
Confidence 8999999999999988 43 3467777654
No 184
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=26.78 E-value=2.6e+02 Score=27.08 Aligned_cols=94 Identities=13% Similarity=0.102 Sum_probs=56.7
Q ss_pred CCCcEEEcCC-CCCHHHHHHHHHCCCcEEEecCHHH------HHHHHh-HC--CCCeEEEEEecCCCCCC---CCCCCCC
Q 045356 117 SPDRIIYANA-CKPVSHIKYAASVGVNLTTFDSIQE------LDKIRK-WH--PKCELLIRIKSPVDGGA---RYPLDSK 183 (419)
Q Consensus 117 ~~~~Ii~~gp-~k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~-~~--~~~~v~lRv~~~~~~g~---~~~~~sR 183 (419)
.++++++.|- ..++++.+++-+.|+..+..+.+.+ ++.+.+ +. ....+.|-++++.-..+ ...+...
T Consensus 263 ~p~~vv~IGIRs~d~eE~e~~~~~Gi~v~t~~eI~~~Gi~~vie~il~~l~~~~~~~VYLSfDIDvLDPa~APGtGTPep 342 (413)
T 3sl1_A 263 KPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISLDIDSVDNVFAPGTGTVAK 342 (413)
T ss_dssp CGGGEEEEEECCCCHHHHHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHCTTSCSCEEEEEEGGGBCTTTCCCSSSCCS
T ss_pred CcceEEEEEcCCCCHHHHHHHHHcCCEEEeHHHhhhcCHHHHHHHHHHHhhhcCCceEEEEEeccEEChhhCCCCCCCCC
Confidence 4567777653 2257888888889987655554433 222222 22 23467777776541111 1223467
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
.|++..|+.++++.+... .++.|+..-
T Consensus 343 GGLt~rEll~llr~L~~s-~kVvG~DIV 369 (413)
T 3sl1_A 343 GGLNYREINLLMKILAET-KRVVSMDLV 369 (413)
T ss_dssp SCBCHHHHHHHHHHHHHH-SCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHhcc-CCEEEEEEE
Confidence 999999999999887543 256666553
No 185
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=26.75 E-value=2.3e+02 Score=26.37 Aligned_cols=57 Identities=7% Similarity=0.168 Sum_probs=38.5
Q ss_pred HHHHHHHHHc-CC--cEEEcCHHHHHHHHHCCCCCCcEEEc-CCCCCHHHHHHHHHCCCcEEEe
Q 045356 87 PAILETLAAL-GS--NFDCASPSEIQAVLALSVSPDRIIYA-NACKPVSHIKYAASVGVNLTTF 146 (419)
Q Consensus 87 ~~v~~~l~~~-G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~-gp~k~~~~l~~a~~~gi~~i~v 146 (419)
.++++.+.+. ++ .+|....+.++.++++|. .|+-. .....++-++.+.++|+.++..
T Consensus 94 ~pvI~~l~~~~~vpISIDT~~~~Va~aAl~aGa---~iINDVsg~~~~~m~~v~a~~g~~vVlM 154 (314)
T 3tr9_A 94 LPVIDAIKKRFPQLISVDTSRPRVMREAVNTGA---DMINDQRALQLDDALTTVSALKTPVCLM 154 (314)
T ss_dssp HHHHHHHHHHCCSEEEEECSCHHHHHHHHHHTC---CEEEETTTTCSTTHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhhCCCeEEEeCCCHHHHHHHHHcCC---CEEEECCCCCchHHHHHHHHhCCeEEEE
Confidence 3566666654 64 888889999999999985 35543 2223446677778888775433
No 186
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=26.75 E-value=3.9e+02 Score=24.86 Aligned_cols=56 Identities=13% Similarity=0.249 Sum_probs=33.6
Q ss_pred cEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHC---CCcEEEec--CHHHHHHHHhH
Q 045356 99 NFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASV---GVNLTTFD--SIQELDKIRKW 158 (419)
Q Consensus 99 g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~---gi~~i~vd--S~~el~~i~~~ 158 (419)
-++|-|++|++.+.++|. +.|.+-+ .++++++.+++. .+.+..-. +++.+..+++.
T Consensus 235 eVEVdtldea~eAl~aGa--D~I~LDn--~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~t 295 (320)
T 3paj_A 235 EVETETLAELEEAISAGA--DIIMLDN--FSLEMMREAVKINAGRAALENSGNITLDNLKECAET 295 (320)
T ss_dssp EEEESSHHHHHHHHHTTC--SEEEEES--CCHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTT
T ss_pred EEEECCHHHHHHHHHcCC--CEEEECC--CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHc
Confidence 578888888888888885 4455544 367778777642 33322222 35555555543
No 187
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=26.57 E-value=3.8e+02 Score=24.66 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=58.8
Q ss_pred cCHHHHHHHH----HCCCCCCcEEEcCCCCC-----HHHHHHH---HH--CCCcE-EEe--cCHHHHHHHHhHCCCCeEE
Q 045356 103 ASPSEIQAVL----ALSVSPDRIIYANACKP-----VSHIKYA---AS--VGVNL-TTF--DSIQELDKIRKWHPKCELL 165 (419)
Q Consensus 103 aS~~E~~~a~----~~G~~~~~Ii~~gp~k~-----~~~l~~a---~~--~gi~~-i~v--dS~~el~~i~~~~~~~~v~ 165 (419)
-|.+|+.... +.|+ ..|.+.|+..+ .+.+..+ ++ .++.+ ++. -+.+.++.+.+.+-
T Consensus 91 ls~eei~~~~~~~~~~G~--~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~----- 163 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGF--HMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGA----- 163 (350)
T ss_dssp CCHHHHHHHHHHHTTSCC--SEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTE-----
T ss_pred CCHHHHHHHHHHHHHCCC--CEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCC-----
Confidence 4777765543 3566 56777665422 1222222 22 35542 233 25667888776541
Q ss_pred EEEecCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHH
Q 045356 166 IRIKSPVDGGAR--YPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFH 223 (419)
Q Consensus 166 lRv~~~~~~g~~--~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~ 223 (419)
=++..+.++... ...-.+ +.+.++..+.++.+++.|+. .+..+-+|. ..+.+.+.
T Consensus 164 ~~i~i~lEt~~~~~~~~i~~-~~~~~~~l~~i~~a~~~Gi~-v~~~~i~Gl-get~e~~~ 220 (350)
T 3t7v_A 164 NFLALYQETYDTELYRKLRV-GQSFDGRVNARRFAKQQGYC-VEDGILTGV-GNDIESTI 220 (350)
T ss_dssp EEEECCCBCSCHHHHHHHST-TCCHHHHHHHHHHHHHHTCE-EEEEEEESS-SCCHHHHH
T ss_pred CEEEEeeecCCHHHHHHhCC-CCCHHHHHHHHHHHHHcCCe-EccceEeec-CCCHHHHH
Confidence 133333332110 000123 56888888999888888887 455667777 44444443
No 188
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=25.90 E-value=2.1e+02 Score=26.15 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=14.2
Q ss_pred CceeeeeccCCcHHHHHHHHHcCCcEEE
Q 045356 75 VHPYYAVKCNPEPAILETLAALGSNFDC 102 (419)
Q Consensus 75 ~~i~~avKan~~~~v~~~l~~~G~g~~V 102 (419)
..+...+-+-..+.+++++.+.|+.+-+
T Consensus 111 a~iINdvsg~~d~~~~~~~a~~~~~vVl 138 (282)
T 1aj0_A 111 AHIINDIRSLSEPGALEAAAETGLPVCL 138 (282)
T ss_dssp CCEEEETTTTCSTTHHHHHHHHTCCEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHhCCeEEE
Confidence 3444444433445566666666654444
No 189
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=25.84 E-value=3.2e+02 Score=23.48 Aligned_cols=94 Identities=11% Similarity=0.058 Sum_probs=56.8
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEE----EcCHHHHHHHHHCCCCCCcEEEc
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFD----CASPSEIQAVLALSVSPDRIIYA 124 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~----VaS~~E~~~a~~~G~~~~~Ii~~ 124 (419)
....++.+.+ .+.++++++..|+..+.+.+.... ...+.+.++ ++. ..+..-++.+++.|+. -.+|+
T Consensus 122 ~~~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~----~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~--v~~wt 193 (224)
T 1vd6_A 122 REGVWVSSFD--PLALLALRKAAPGLPLGFLMAEDH----SALLPCLGVEAVHPHHALVTEEAVAGWRKRGLF--VVAWT 193 (224)
T ss_dssp CSSEEEEESC--HHHHHHHHHHCTTSCEEEEESSCC----GGGGGGSCCSEEEEBGGGCCHHHHHHHHHTTCE--EEEEC
T ss_pred CCcEEEEeCC--HHHHHHHHHHCCCCCEEEEecccc----HHHHHHcCCcEEecCcccCCHHHHHHHHHCCCE--EEEEe
Confidence 4455554432 223455666677776666665433 123334454 332 3456777788888872 34444
Q ss_pred CCCCCHHHHHHHHHCCCcEEEecCHHHHH
Q 045356 125 NACKPVSHIKYAASVGVNLTTFDSIQELD 153 (419)
Q Consensus 125 gp~k~~~~l~~a~~~gi~~i~vdS~~el~ 153 (419)
..++++++.+.+.|+.-+..|..+.+.
T Consensus 194 --vn~~~~~~~l~~~GvdgI~TD~p~~~~ 220 (224)
T 1vd6_A 194 --VNEEGEARRLLALGLDGLIGDRPEVLL 220 (224)
T ss_dssp --CCCHHHHHHHHHTTCSEEEESCHHHHT
T ss_pred --CCCHHHHHHHHhcCCCEEEcCCHHHHH
Confidence 346888999999998877888877654
No 190
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=25.56 E-value=3.3e+02 Score=23.57 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=10.8
Q ss_pred cHHHHHHHHHcCC-cEEEc
Q 045356 86 EPAILETLAALGS-NFDCA 103 (419)
Q Consensus 86 ~~~v~~~l~~~G~-g~~Va 103 (419)
....++.+.+.|. ++++.
T Consensus 21 ~~~~l~~~~~~G~~~vEl~ 39 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELR 39 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEee
Confidence 3455666666666 66654
No 191
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=25.47 E-value=1.4e+02 Score=27.06 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCeEEEEEEeeC-CCCCCH----------HHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC
Q 045356 192 AHLLGAAQASGLAVIGVAFHIG-SEATNL----------DAFHAAIAEAKTVFETAARLGMTKMRVLDIGG 251 (419)
Q Consensus 192 ~~~l~~~~~~~l~l~Glh~H~g-s~~~~~----------~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGG 251 (419)
.++.+.+++.||.+.++|+-.. ....++ +...+.++.+++.++.++++| . ++|.+++
T Consensus 62 ~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG-~--~~v~~~~ 129 (303)
T 3l23_A 62 MDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLG-C--KYLIQPM 129 (303)
T ss_dssp HHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTT-C--SEEEECS
T ss_pred HHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcC-C--CEEEECC
Confidence 3444556678999988875431 111111 112445666777888888888 3 3455554
No 192
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=25.43 E-value=78 Score=30.73 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHC-CCCCCcEEEc
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLAL-SVSPDRIIYA 124 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~-G~~~~~Ii~~ 124 (419)
++...+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. ++ .|...
T Consensus 203 ~~~d~~~v~avR~a~G~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~d 277 (418)
T 3r4e_A 203 LNYVPKLFEELRKTYGFDHHLL--HDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVT---PLAVG 277 (418)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--EECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCS---CEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCeEE--EeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCC---CEEEc
Confidence 3556677888888884 55554 788872 455666777776 55521 33444444443 22 35555
Q ss_pred CCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHC
Q 045356 125 NACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWH 159 (419)
Q Consensus 125 gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~ 159 (419)
....+..+++.+++.| +..++++ .+.+..++++.+
T Consensus 278 E~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A 318 (418)
T 3r4e_A 278 EIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLA 318 (418)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHH
Confidence 5555666666666654 3444444 345555555543
No 193
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=25.21 E-value=2e+02 Score=27.02 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHhcCCeEEEEEE
Q 045356 189 EEVAHLLGAAQASGLAVIGVAF 210 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~ 210 (419)
.++.++++.++..++.+. +|+
T Consensus 280 ~~~~~i~~~A~~~gi~~~-~h~ 300 (371)
T 2ovl_A 280 TTFRKVAALAEANNMLLT-SHG 300 (371)
T ss_dssp HHHHHHHHHHHHTTCCEE-ECS
T ss_pred HHHHHHHHHHHHcCCeEc-ccc
Confidence 344555555555555544 254
No 194
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=25.16 E-value=1.1e+02 Score=28.88 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEeeCC
Q 045356 188 PEEVAHLLGAAQASGLAVIGVAFHIGS 214 (419)
Q Consensus 188 ~ee~~~~l~~~~~~~l~l~Glh~H~gs 214 (419)
..++.++++.++..++.+. +|++..|
T Consensus 273 it~~~~i~~~a~~~gi~~~-~~~~~es 298 (356)
T 3ro6_B 273 LAPARRIATIAETAGIDLM-WGCMDES 298 (356)
T ss_dssp HHHHHHHHHHHHHHTCEEE-ECCCSCC
T ss_pred HHHHHHHHHHHHHcCCEEE-ecCCccc
Confidence 3466777777777788775 5776544
No 195
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=25.02 E-value=3.1e+02 Score=26.10 Aligned_cols=18 Identities=11% Similarity=0.193 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhcCCeEE
Q 045356 189 EEVAHLLGAAQASGLAVI 206 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~ 206 (419)
.++.++++.++..++.+.
T Consensus 309 te~~~i~~~A~~~gi~~~ 326 (398)
T 2pp0_A 309 SPFLKIMDLAAKHGRKLA 326 (398)
T ss_dssp HHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHcCCeEe
Confidence 345555655566666655
No 196
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=24.80 E-value=78 Score=29.44 Aligned_cols=58 Identities=10% Similarity=0.023 Sum_probs=36.4
Q ss_pred HHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCH----------HHHHHHHHCCCcEEEecC
Q 045356 90 LETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPV----------SHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 90 ~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~----------~~l~~a~~~gi~~i~vdS 148 (419)
++...+.|+.--|+|..|+..+++. ++++-+++++++... ..+..+++.|++.+++.+
T Consensus 164 A~~a~~~G~dGvV~s~~E~~~IR~~-~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr 231 (303)
T 3ru6_A 164 SKISYENGLDGMVCSVFESKKIKEH-TSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGR 231 (303)
T ss_dssp HHHHHHTTCSEEECCTTTHHHHHHH-SCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECH
T ss_pred HHHHHHcCCCEEEECHHHHHHHHHh-CCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEECh
Confidence 3344456885567789999988875 233446666544321 146677788888766643
No 197
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=24.71 E-value=98 Score=27.10 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCC-cEEEcC--HHHHHHHHHCCCCCCcEEEcCCCCCHH--HHHHHHHCCCcEEEec
Q 045356 87 PAILETLAALGS-NFDCAS--PSEIQAVLALSVSPDRIIYANACKPVS--HIKYAASVGVNLTTFD 147 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~VaS--~~E~~~a~~~G~~~~~Ii~~gp~k~~~--~l~~a~~~gi~~i~vd 147 (419)
..+++...+.|. |+-|+. ++|+..+++.- + +-+++++++. .+ .+..+++.|.+.+++.
T Consensus 118 ~~~a~~a~~~G~~GvV~sat~~~e~~~ir~~~-~-~f~~v~pGI~-~~g~~~~~a~~~Gad~iVvG 180 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPATRPSMISRVKGDF-P-DKLVISPGVG-TQGAKPGIALCHGADYEIVG 180 (215)
T ss_dssp HHHHHHHHHHCCSEEECCTTSHHHHHHHHHHC-T-TSEEEECCTT-STTCCTTHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCceeeCCCCHHHHHHHHHhC-C-CcEEEcCCCC-cCcCCHHHHHHcCCCEEEeC
Confidence 457777778898 776654 78998888752 2 2456665443 23 5777888888876663
No 198
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=24.49 E-value=1.1e+02 Score=29.42 Aligned_cols=41 Identities=7% Similarity=0.114 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE
Q 045356 59 GVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD 101 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~ 101 (419)
+.-.+.++++++.++ ++.++ +-+|.. ..+++.|.+.|+ .+|
T Consensus 194 ~~d~~~v~avR~a~g~~~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iE 242 (400)
T 4dxk_A 194 KSALEPFEKIRKAVGDKMDIM--VEFHSMWQLLPAMQIAKALTPYQTFWHE 242 (400)
T ss_dssp HHHHHHHHHHHHHHGGGSEEE--EECTTCBCHHHHHHHHHHTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHcCCCceEE--EECCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 344567788888875 45544 778862 334555555665 555
No 199
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=24.33 E-value=2.6e+02 Score=26.70 Aligned_cols=40 Identities=18% Similarity=0.007 Sum_probs=21.5
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC
Q 045356 57 DLGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS 98 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~ 98 (419)
+++.-.+.++++++.++ ++.++ +.+|.. ..+++.|.+.|+
T Consensus 173 ~~~~d~~~v~avR~a~g~~~~l~--vDaN~~~~~~~A~~~~~~L~~~~i 219 (393)
T 4dwd_A 173 DIPGDIAKARAVRELLGPDAVIG--FDANNGYSVGGAIRVGRALEDLGY 219 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEE--EECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEE--EECCCCCCHHHHHHHHHHHHhhCC
Confidence 44555566666776663 44443 666652 234455555554
No 200
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=24.04 E-value=2.8e+02 Score=24.09 Aligned_cols=47 Identities=13% Similarity=0.331 Sum_probs=31.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 045356 184 FGANPEEVAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLG 240 (419)
Q Consensus 184 fGi~~ee~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g 240 (419)
..++.+++.++.+.+++.++.+.+++..... ..+ .+.+.++.++.+|
T Consensus 58 ~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~---~~~-------~~~~~i~~A~~lG 104 (262)
T 3p6l_A 58 FNLDAQTQKEIKELAASKGIKIVGTGVYVAE---KSS-------DWEKMFKFAKAMD 104 (262)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEECCS---STT-------HHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEeccCCc---cHH-------HHHHHHHHHHHcC
Confidence 3566777888888888899999988876432 112 2344556666777
No 201
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=24.03 E-value=1.8e+02 Score=27.87 Aligned_cols=43 Identities=9% Similarity=-0.034 Sum_probs=23.4
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE
Q 045356 57 DLGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD 101 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~ 101 (419)
+.+.-.+.++++++.++ +..++ +.+|.. ..+++.|.+.|+ .+|
T Consensus 181 ~~~~d~~~v~avR~a~g~~~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iE 231 (392)
T 3ddm_A 181 DDARDVRNALHVRELLGAATPLM--ADANQGWDLPRARQMAQRLGPAQLDWLE 231 (392)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEE--EECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred CHHHHHHHHHHHHHhcCCCceEE--EeCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 35555666777777663 44443 666652 234455555555 444
No 202
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=23.93 E-value=4.4e+02 Score=24.56 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhCC-CCceeeeeccCC------------cHHHHHHHHHcCC-cEEEcC----------------HHHHHH
Q 045356 61 VISLYHQLISNLP-MVHPYYAVKCNP------------EPAILETLAALGS-NFDCAS----------------PSEIQA 110 (419)
Q Consensus 61 l~~ni~~~~~~~~-~~~i~~avKan~------------~~~v~~~l~~~G~-g~~VaS----------------~~E~~~ 110 (419)
+.+-++++++.++ +.-+. +|-++ ...+++.|.+.|+ .++|+. ..-+..
T Consensus 205 ~~eiv~aVR~avG~d~pV~--vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 282 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPLF--VRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADA 282 (349)
T ss_dssp HHHHHHHHHHHSCTTSCEE--EEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEE--EEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHH
Confidence 5677788888875 32232 44443 3567888888998 788763 112333
Q ss_pred HHHCCCCCCcEEEcCCCCCHHHHHHHHHCC-CcEEEecC
Q 045356 111 VLALSVSPDRIIYANACKPVSHIKYAASVG-VNLTTFDS 148 (419)
Q Consensus 111 a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-i~~i~vdS 148 (419)
+++. ++ -.|+..|...+.++.+.+++.| +..+.+.+
T Consensus 283 ir~~-~~-iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR 319 (349)
T 3hgj_A 283 VRKR-VG-LRTGAVGLITTPEQAETLLQAGSADLVLLGR 319 (349)
T ss_dssp HHHH-HC-CEEEECSSCCCHHHHHHHHHTTSCSEEEEST
T ss_pred HHHH-cC-ceEEEECCCCCHHHHHHHHHCCCceEEEecH
Confidence 4433 11 2477777777888888888877 66666654
No 203
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=23.62 E-value=3.3e+02 Score=25.74 Aligned_cols=18 Identities=11% Similarity=0.287 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHhcCCeEE
Q 045356 189 EEVAHLLGAAQASGLAVI 206 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~ 206 (419)
.++.++++.++..++.+.
T Consensus 283 t~~~~i~~~A~~~gi~~~ 300 (391)
T 2qgy_A 283 IDIIEISNEASNNGIFIS 300 (391)
T ss_dssp HHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 456667777777777665
No 204
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=23.53 E-value=2.9e+02 Score=25.81 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEee
Q 045356 189 EEVAHLLGAAQASGLAVIGVAFHI 212 (419)
Q Consensus 189 ee~~~~l~~~~~~~l~l~Glh~H~ 212 (419)
.++.++++.++..++.+. +|+..
T Consensus 276 t~~~~i~~~A~~~g~~~~-~~~~~ 298 (366)
T 1tkk_A 276 SGAEKINAMAEACGVECM-VGSMI 298 (366)
T ss_dssp HHHHHHHHHHHHHTCCEE-ECCSS
T ss_pred HHHHHHHHHHHHcCCcEE-ecCcc
Confidence 456677777777777653 56653
No 205
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=23.40 E-value=4.7e+02 Score=24.60 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE--E--cCHHHHHHHHHCCCCCCcEEEcC
Q 045356 58 LGVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD--C--ASPSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~--V--aS~~E~~~a~~~G~~~~~Ii~~g 125 (419)
++.-.+.++++++.++ ++.+ .+.+|.. ..+++.+.+.++ .++ + ...+++..+++.- +-.|...-
T Consensus 176 ~~~d~~~v~avR~a~g~~~~l--~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ipIa~dE 251 (381)
T 3fcp_A 176 LATDLRHTRAIVEALGDRASI--RVDVNQAWDAATGAKGCRELAAMGVDLIEQPVSAHDNAALVRLSQQI--ETAILADE 251 (381)
T ss_dssp HHHHHHHHHHHHHHTCTTCEE--EEECTTCBCHHHHHHHHHHHHHTTCSEEECCBCTTCHHHHHHHHHHS--SSEEEEST
T ss_pred hHHHHHHHHHHHHHcCCCCeE--EEECCCCCCHHHHHHHHHHHhhcCccceeCCCCcccHHHHHHHHHhC--CCCEEECC
Confidence 3455566777777775 3444 3777762 334555666665 444 2 2344454444431 12344444
Q ss_pred CCCCHHHHHHHHHCC
Q 045356 126 ACKPVSHIKYAASVG 140 (419)
Q Consensus 126 p~k~~~~l~~a~~~g 140 (419)
...+..+++.+++.+
T Consensus 252 ~~~~~~~~~~~~~~~ 266 (381)
T 3fcp_A 252 AVATAYDGYQLAQQG 266 (381)
T ss_dssp TCCSHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHcC
Confidence 444555666555543
No 206
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=23.30 E-value=4.4e+02 Score=24.83 Aligned_cols=31 Identities=10% Similarity=-0.025 Sum_probs=16.6
Q ss_pred cHHHHHHHHHc-CCc---EEEcCHHHHHHHHHCCC
Q 045356 86 EPAILETLAAL-GSN---FDCASPSEIQAVLALSV 116 (419)
Q Consensus 86 ~~~v~~~l~~~-G~g---~~VaS~~E~~~a~~~G~ 116 (419)
....++.+.+. +.. =.+.+.++++.+.++|+
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~Ga 239 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGILTKEDAELAMKHNV 239 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCC
Confidence 44556666543 221 12456666666666665
No 207
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=23.29 E-value=3.5e+02 Score=25.94 Aligned_cols=78 Identities=9% Similarity=-0.067 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHCCCCCCcEEEcCC
Q 045356 59 GVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLALSVSPDRIIYANA 126 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~G~~~~~Ii~~gp 126 (419)
+.-.+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. . +-.|.....
T Consensus 214 ~~die~v~avReavG~d~~L~--vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~-~-~iPIa~dE~ 289 (412)
T 3stp_A 214 RENLKRVEAVREVIGYDNDLM--LECYMGWNLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAM-N-IVPISGGEH 289 (412)
T ss_dssp HHHHHHHHHHHHHHCSSSEEE--EECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHT-C-SSCEEECTT
T ss_pred HHHHHHHHHHHHHcCCCCeEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhC-C-CCCEEeCCC
Confidence 445566677777773 55544 677762 345566666665 45421 23444444433 1 123444444
Q ss_pred CCCHHHHHHHHHCC
Q 045356 127 CKPVSHIKYAASVG 140 (419)
Q Consensus 127 ~k~~~~l~~a~~~g 140 (419)
..+..+++.+++.+
T Consensus 290 ~~~~~~~~~li~~~ 303 (412)
T 3stp_A 290 EFSVIGCAELINRK 303 (412)
T ss_dssp CCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHcC
Confidence 44555555555443
No 208
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=23.27 E-value=3.8e+02 Score=24.22 Aligned_cols=27 Identities=11% Similarity=0.043 Sum_probs=15.0
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEe
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTF 146 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~v 146 (419)
.|+..|.+.+.+++..++..|+..+.+
T Consensus 244 pvi~~GGI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 244 QIIGTGGIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 355555555666666655555554444
No 209
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=23.24 E-value=42 Score=22.96 Aligned_cols=22 Identities=36% Similarity=0.610 Sum_probs=19.9
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC
Q 045356 182 SKFGANPEEVAHLLGAAQASGL 203 (419)
Q Consensus 182 sRfGi~~ee~~~~l~~~~~~~l 203 (419)
.+||++.+++..+++++++.|+
T Consensus 33 ~kygV~kdeV~~~LrrLe~KGL 54 (59)
T 2xvc_A 33 KVYGVEKQEVVKLLEALKNKGL 54 (59)
T ss_dssp HHHCCCHHHHHHHHHHHHHTTS
T ss_pred HHhCCCHHHHHHHHHHHHHCCC
Confidence 7899999999999999988874
No 210
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=23.04 E-value=3.6e+02 Score=24.46 Aligned_cols=23 Identities=4% Similarity=-0.073 Sum_probs=11.8
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCc
Q 045356 120 RIIYANACKPVSHIKYAASVGVN 142 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~ 142 (419)
.|+.+|.+.+.+++..++..|+.
T Consensus 246 pvi~~GGI~~~~da~~~l~~GAd 268 (314)
T 2e6f_A 246 LVFGCGGVYSGEDAFLHILAGAS 268 (314)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCS
T ss_pred CEEEECCCCCHHHHHHHHHcCCC
Confidence 34445555555555555554544
No 211
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=22.87 E-value=1.1e+02 Score=29.22 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcC--CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCc--ceEEEeCCCC
Q 045356 189 EEVAHLLGAAQASG--LAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTK--MRVLDIGGGF 253 (419)
Q Consensus 189 ee~~~~l~~~~~~~--l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--~~~ldiGGG~ 253 (419)
+...++++.++..+ +.-.|++.|++....+.+.+++ .++.+..+| .+ +..+|+...-
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~-------~l~~~a~lG-lpI~iTElDi~~~~ 272 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEK-------TINMFAALG-LDNQITELDVSMYG 272 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHH-------HHHHHHHTT-CEEEEEEEEECSSC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHH-------HHHHHHhcC-CeEEEeeccccCCC
Confidence 45566777776665 6888888898654445554443 344455666 44 4568887653
No 212
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=22.86 E-value=3.7e+02 Score=24.38 Aligned_cols=29 Identities=17% Similarity=0.076 Sum_probs=16.8
Q ss_pred CCceeeeeccC-CcHHHHHHHHHcCCcEEE
Q 045356 74 MVHPYYAVKCN-PEPAILETLAALGSNFDC 102 (419)
Q Consensus 74 ~~~i~~avKan-~~~~v~~~l~~~G~g~~V 102 (419)
+..+...+-.. ..+.+++++.+.|+.+-+
T Consensus 100 Ga~iINdvsg~~~d~~m~~~~a~~~~~vVl 129 (280)
T 1eye_A 100 GAQMVNDVSGGRADPAMGPLLAEADVPWVL 129 (280)
T ss_dssp TCCEEEETTTTSSCTTHHHHHHHHTCCEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHhCCeEEE
Confidence 34455555443 256677777777775555
No 213
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=22.80 E-value=3.7e+02 Score=25.39 Aligned_cols=85 Identities=14% Similarity=0.077 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEE--E--cCHHHHHHHHHCCCCCCcEEEcCC
Q 045356 59 GVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFD--C--ASPSEIQAVLALSVSPDRIIYANA 126 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~--V--aS~~E~~~a~~~G~~~~~Ii~~gp 126 (419)
+.-.+.++++++.++ ++.++ +.+|.. ..+++.|.+.++ .++ + ...+++..+++.- +-.|...-.
T Consensus 178 ~~d~~~v~avR~a~g~~~~l~--vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE~ 253 (382)
T 3dgb_A 178 DRDLAHVIAIKKALGDSASVR--VDVNQAWDEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNASS--PAPIMADES 253 (382)
T ss_dssp HHHHHHHHHHHHHHGGGSEEE--EECTTCBCHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHHC--SSCEEESTT
T ss_pred HHHHHHHHHHHHHcCCCCeEE--EeCCCCCCHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHhC--CCCEEeCCC
Confidence 444455666666664 33433 666652 234555555554 444 2 2344444444431 123444444
Q ss_pred CCCHHHHHHHHHCC-CcEEEec
Q 045356 127 CKPVSHIKYAASVG-VNLTTFD 147 (419)
Q Consensus 127 ~k~~~~l~~a~~~g-i~~i~vd 147 (419)
..+..+++.+++.+ +..++++
T Consensus 254 ~~~~~~~~~~~~~~~~d~v~~k 275 (382)
T 3dgb_A 254 IECVEDAFNLAREGAASVFALK 275 (382)
T ss_dssp CSSHHHHHHHHHHTCCSEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEec
Confidence 44555555555433 3333443
No 214
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=22.47 E-value=2.9e+02 Score=26.38 Aligned_cols=99 Identities=14% Similarity=0.078 Sum_probs=60.0
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCCc------HHHHHHHHHcCC-cEEEc--CHHHHHHHHHC-CCCCCcEEEcCC
Q 045356 57 DLGVVISLYHQLISNLPMVHPYYAVKCNPE------PAILETLAALGS-NFDCA--SPSEIQAVLAL-SVSPDRIIYANA 126 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~~~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va--S~~E~~~a~~~-G~~~~~Ii~~gp 126 (419)
+.+.=.+.++++++.+|++.++ +-+|.. ..+++.|.+.++ .+|-- ....+..+++. ++ .|...-.
T Consensus 195 ~~~~d~~~v~avR~~~~~~~l~--vDaN~~w~~~~A~~~~~~l~~~~i~~iEqP~~d~~~~~~l~~~~~i---PIa~dE~ 269 (398)
T 4dye_A 195 DCAGDVAILRAVREALPGVNLR--VDPNAAWSVPDSVRAGIALEELDLEYLEDPCVGIEGMAQVKAKVRI---PLCTNMC 269 (398)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEE--EECTTCSCHHHHHHHHHHHGGGCCSEEECCSSHHHHHHHHHHHCCS---CEEESSS
T ss_pred CHHHHHHHHHHHHHhCCCCeEE--eeCCCCCCHHHHHHHHHHHhhcCCCEEcCCCCCHHHHHHHHhhCCC---CEEeCCc
Confidence 4566667788888888666555 788872 345566666776 55532 34444444443 32 4665555
Q ss_pred CCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCC
Q 045356 127 CKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHP 160 (419)
Q Consensus 127 ~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~ 160 (419)
..+..+++.+++.+ +..+++| .+.+..++.+.+.
T Consensus 270 ~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~ 309 (398)
T 4dye_A 270 VVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCE 309 (398)
T ss_dssp CCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 56677777777665 4555665 5666666666543
No 215
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=22.38 E-value=1.2e+02 Score=28.03 Aligned_cols=94 Identities=9% Similarity=0.100 Sum_probs=50.9
Q ss_pred HHHHHHHHHhCC--CCceeeeeccCCcH-HHHHHHHHcC-C-----c----E--------EEcCHHHHHH-HHHCCCCCC
Q 045356 62 ISLYHQLISNLP--MVHPYYAVKCNPEP-AILETLAALG-S-----N----F--------DCASPSEIQA-VLALSVSPD 119 (419)
Q Consensus 62 ~~ni~~~~~~~~--~~~i~~avKan~~~-~v~~~l~~~G-~-----g----~--------~VaS~~E~~~-a~~~G~~~~ 119 (419)
....+++.+... +++++-.=|+.|.. .+.+.....| . + + .+.++.++.. +++... ..
T Consensus 121 AT~t~~~v~~~~g~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av~~ar~~~~-~~ 199 (287)
T 3tqv_A 121 ATVTNKLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTKAKKLDS-NK 199 (287)
T ss_dssp HHHHHHHHHHHTTSSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC----CHHHHHHHHHHHCT-TS
T ss_pred HHHHHHHHHHhCCCCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhCCHHHHHHHHHhhCC-CC
Confidence 334444554443 56777777888743 3333333322 1 1 1 2246666643 444432 23
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEecC--HHHHHHHHhH
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFDS--IQELDKIRKW 158 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS--~~el~~i~~~ 158 (419)
.|.+- ..+-++++.|++.|+..+.+|+ .++++++.+.
T Consensus 200 ~IeVE--v~tl~ea~eAl~aGaD~I~LDn~~~~~l~~av~~ 238 (287)
T 3tqv_A 200 VVEVE--VTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSI 238 (287)
T ss_dssp CEEEE--ESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHH
T ss_pred cEEEE--eCCHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHh
Confidence 45553 3466888999998888777775 4566665554
No 216
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=22.05 E-value=3.7e+02 Score=25.09 Aligned_cols=100 Identities=8% Similarity=0.075 Sum_probs=56.3
Q ss_pred eHHHHHHHHHHHHHhC-CCCceeeeeccCCc------H-HHHHHHHHcCC-cEE--E--cCHHHHHHHHHCCCCCCcEEE
Q 045356 57 DLGVVISLYHQLISNL-PMVHPYYAVKCNPE------P-AILETLAALGS-NFD--C--ASPSEIQAVLALSVSPDRIIY 123 (419)
Q Consensus 57 d~~~l~~ni~~~~~~~-~~~~i~~avKan~~------~-~v~~~l~~~G~-g~~--V--aS~~E~~~a~~~G~~~~~Ii~ 123 (419)
|.+...+.++++++.+ +++.+ .+++|.. . .+++.+.+.|+ .++ + ...+.+..+++. .+ -.|..
T Consensus 167 ~~~~~~e~v~avr~a~g~~~~l--~vDan~~~~~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~-iPI~~ 242 (369)
T 2p8b_A 167 NVKEDVKRIEAVRERVGNDIAI--RVDVNQGWKNSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSK-TD-LPLMI 242 (369)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEE--EEECTTTTBSHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHT-CC-SCEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHh-CC-CCEEe
Confidence 4566677788888877 35555 4788862 2 33444444565 444 1 134445554443 11 24666
Q ss_pred cCCCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCC
Q 045356 124 ANACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHP 160 (419)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~ 160 (419)
.....+.++++.+++.+ +..+.++ .+.+..++.+.+.
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 285 (369)
T 2p8b_A 243 DEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAE 285 (369)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHH
Confidence 66666777777777644 4555554 5556666655543
No 217
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=21.94 E-value=3.8e+02 Score=25.14 Aligned_cols=38 Identities=21% Similarity=0.148 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC
Q 045356 59 GVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS 98 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~ 98 (419)
+.-.+.++++++.++ +..++ +.+|.. ..+++.|.+.|+
T Consensus 172 ~~d~~~v~avR~~~g~~~~l~--vDan~~~~~~~a~~~~~~l~~~~i 216 (370)
T 1chr_A 172 QDDLIHMEALSNSLGSKAYLR--VDVNQAWDEQVASVYIPELEALGV 216 (370)
T ss_dssp HHHHHHHHHHHHHSSTTCCEE--EECTTCCCTTHHHHHTHHHHTTTE
T ss_pred HHHHHHHHHHHHhcCCCCEEE--EECCCCCCHHHHHHHHHHHHhcCC
Confidence 444555666666665 24443 566652 234455555554
No 218
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=21.91 E-value=1.8e+02 Score=26.91 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=54.7
Q ss_pred CCCcEEEcCCC-CCHHHHHHHHHCCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCCC---CCCCCCCCC
Q 045356 117 SPDRIIYANAC-KPVSHIKYAASVGVNLTTFDSIQE------LDKIRKWHPKCELLIRIKSPVDGGAR---YPLDSKFGA 186 (419)
Q Consensus 117 ~~~~Ii~~gp~-k~~~~l~~a~~~gi~~i~vdS~~e------l~~i~~~~~~~~v~lRv~~~~~~g~~---~~~~sRfGi 186 (419)
.+.+++..|.- .++++.+++-+.|+..+..+.+.+ ++.+.+. ...+.|-++.+.-..+. ..+....|+
T Consensus 172 ~~~~~~~iGiR~~~~~e~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~~--~~~vylSiDiDvLDpa~aPgtgtp~pgGl 249 (313)
T 3pzl_A 172 GEGRITSIGIRSVSREEFEDPDFRKVSFISSFDVKKNGIDKYIEEVDRK--SRRVYISVDMDGIDPAYAPAVGTPEPFGL 249 (313)
T ss_dssp CSSSEEEEEECBCCHHHHTSGGGGGSEEEEHHHHHHHCSHHHHHHHHHH--CSEEEEEEEGGGBCTTTCTTBSSCCSSCB
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHCCCEEEEHHHHhhhhHHHHHHHHhcc--CCeEEEEEeccccChhhCCCCCCCCCCCC
Confidence 35677776642 356777777778876555444332 1223222 24677777765421111 223468999
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 187 NPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 187 ~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
+..|+.++++.+.. ++.|+..-
T Consensus 250 t~~e~~~il~~l~~---~vvg~Div 271 (313)
T 3pzl_A 250 ADTDVRRLIERLSY---KAVGFDIV 271 (313)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEEE
T ss_pred CHHHHHHHHHHHhc---CeEEEEEE
Confidence 99999999988754 77777664
No 219
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=21.87 E-value=4.3e+02 Score=24.29 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=59.4
Q ss_pred HHHHHHCC-CCCCcEEEcCCC---CCHHHHHHHHHCCCcEEEecCHH------HHHHHHhHCCCCeEEEEEecCCCCCC-
Q 045356 108 IQAVLALS-VSPDRIIYANAC---KPVSHIKYAASVGVNLTTFDSIQ------ELDKIRKWHPKCELLIRIKSPVDGGA- 176 (419)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~---k~~~~l~~a~~~gi~~i~vdS~~------el~~i~~~~~~~~v~lRv~~~~~~g~- 176 (419)
+..+.+.+ +.+.+++..|.- .++++.+.+-+.|+..+..+.+. .++.+.+..+ .++.|-++.+.-..+
T Consensus 166 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~~v~~~l~~~~~~~~-~~vylS~DiDvLDpa~ 244 (316)
T 2a0m_A 166 FRQLLEESSFSGKRFVEFACQGSQCGALHAQYVRDHQGHLMWLSEVRKKGAVAALEDAFGLTG-KNTFFSFDVDSLKSSD 244 (316)
T ss_dssp HHHHHTCTTCCGGGEEEEEECTTTSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHHHHHC-SSEEEEEEGGGBBTTT
T ss_pred HHHHHHhccCCCceEEEEEeCCCCCCHHHHHHHHHcCCeEEEHHHHhhhHHHHHHHHHHhhCC-CeEEEEEccccCcccc
Confidence 44445433 345677776542 24677888888898755554443 2222211111 357777776541101
Q ss_pred --CCCCCCCCCCCHHHHHHHHHHHHhcCCeEEEEEEe
Q 045356 177 --RYPLDSKFGANPEEVAHLLGAAQASGLAVIGVAFH 211 (419)
Q Consensus 177 --~~~~~sRfGi~~ee~~~~l~~~~~~~l~l~Glh~H 211 (419)
...+....|++..|+.++++.+... .++.|+..-
T Consensus 245 aPgtgtp~pGGlt~~e~~~il~~l~~~-~~vvg~Div 280 (316)
T 2a0m_A 245 MPGVSCPAAVGLSAQEAFDMCFLAGKT-PTVMMMDMS 280 (316)
T ss_dssp CCCBSSCBSSCBCHHHHHHHHHHHHHC-TTEEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHcC-CCEEEEEEE
Confidence 1234478999999999999887543 467777654
No 220
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=21.86 E-value=3.8e+02 Score=23.39 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=20.9
Q ss_pred HHHHHHHHHcCC--cEEEcCHHHHHHHHHCCC
Q 045356 87 PAILETLAALGS--NFDCASPSEIQAVLALSV 116 (419)
Q Consensus 87 ~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~ 116 (419)
..+++.+.+.|. ..+|.+.+|++.+.++|+
T Consensus 119 ~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Ga 150 (232)
T 3igs_A 119 EALLARIHHHHLLTMADCSSVDDGLACQRLGA 150 (232)
T ss_dssp HHHHHHHHHTTCEEEEECCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCC
Confidence 456666666664 677777777777777775
No 221
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=21.78 E-value=2.5e+02 Score=26.75 Aligned_cols=79 Identities=14% Similarity=0.035 Sum_probs=49.4
Q ss_pred HHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-cEEEcC---------------HHHHHHHHHCCCCCCcEEEcC
Q 045356 62 ISLYHQLISNLPMVHPYYAVKCNPEPAILETLAALGS-NFDCAS---------------PSEIQAVLALSVSPDRIIYAN 125 (419)
Q Consensus 62 ~~ni~~~~~~~~~~~i~~avKan~~~~v~~~l~~~G~-g~~VaS---------------~~E~~~a~~~G~~~~~Ii~~g 125 (419)
.+.++++++..+ . -..+|--..++.++.+.+.|+ ++.|+. +.|+..+. +. .++..|
T Consensus 214 ~~~i~~i~~~~~-~--Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~---pVia~G 285 (380)
T 1p4c_A 214 WEALRWLRDLWP-H--KLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GK---PVLIDS 285 (380)
T ss_dssp HHHHHHHHHHCC-S--EEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CS---CEEECS
T ss_pred HHHHHHHHHhcC-C--CEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CC---eEEEEC
Confidence 456677777653 2 233454456778888888887 777743 23333222 22 577788
Q ss_pred CCCCHHHHHHHHHCCCcEEEecC
Q 045356 126 ACKPVSHIKYAASVGVNLTTFDS 148 (419)
Q Consensus 126 p~k~~~~l~~a~~~gi~~i~vdS 148 (419)
.+.+..++..++..|+..+.+.+
T Consensus 286 GI~~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 286 GFRRGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp SCCSHHHHHHHHHTTCSCEEESH
T ss_pred CCCCHHHHHHHHHhCCcHhhehH
Confidence 88888888888888876555554
No 222
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=21.64 E-value=3.3e+02 Score=25.00 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=38.9
Q ss_pred HHHHHHHHHc-CC--cEEEcCHHHHHHHHHCCCCCCcEEEc--CCCCCHHHHHHHHHCCCcEEEe
Q 045356 87 PAILETLAAL-GS--NFDCASPSEIQAVLALSVSPDRIIYA--NACKPVSHIKYAASVGVNLTTF 146 (419)
Q Consensus 87 ~~v~~~l~~~-G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~--gp~k~~~~l~~a~~~gi~~i~v 146 (419)
.++++.+.+. ++ .+|....+-++.++++|. .|+.. +....++-++.+.++|+.++..
T Consensus 104 vpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa---~iINdvsg~~~d~~m~~~aa~~g~~vVlm 165 (297)
T 1tx2_A 104 VPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGA---HIINDIWGAKAEPKIAEVAAHYDVPIILM 165 (297)
T ss_dssp HHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTC---CEEEETTTTSSCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCCHHHHHHHHHhCCcEEEE
Confidence 3455666653 64 899999999999999984 46653 2212456678888888875433
No 223
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=21.44 E-value=3.8e+02 Score=26.06 Aligned_cols=56 Identities=23% Similarity=0.207 Sum_probs=34.8
Q ss_pred HHHHHhcCCeEEEE----EEee----CCC-CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC
Q 045356 195 LGAAQASGLAVIGV----AFHI----GSE-ATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGGGF 253 (419)
Q Consensus 195 l~~~~~~~l~l~Gl----h~H~----gs~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGGG~ 253 (419)
.+.++..++.+... ..|. |.. ..+++.....++.+++.++.+.++| .+ .+.+-+|.
T Consensus 126 k~~l~~~GL~~~~~t~nl~~h~~y~~G~~~spd~evR~~ai~~lk~aId~A~~LG-a~--~vv~~~G~ 190 (438)
T 1a0c_A 126 KDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNADVFAYSAAQVKKALEITKELG-GE--NYVFWGGR 190 (438)
T ss_dssp HHHHTTCSCEEEEEECCCSSSGGGTTCSTTCSCHHHHHHHHHHHHHHHHHHHHTT-CS--EEEECCTT
T ss_pred HHHHHHhCCceEeccccccCCCccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-CC--EEEEccCC
Confidence 33444568877542 2232 221 3466767788888888899888988 33 56665554
No 224
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=21.35 E-value=1.2e+02 Score=27.41 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=63.9
Q ss_pred CcceeeecCCCCHHHHHHHHHhhcCCCCCcEEEEe----HHHHHHHHHHHHHhCC----CCceeeeec-cCCc-------
Q 045356 23 GERVPTITKDGGLLEFMESIILKRQELDEPFYVLD----LGVVISLYHQLISNLP----MVHPYYAVK-CNPE------- 86 (419)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tP~~v~d----~~~l~~ni~~~~~~~~----~~~i~~avK-an~~------- 86 (419)
|+.+=.+.|..-+.+.....++...+++--++.+. .+.++.-++..++..+ +.+++.+.. ++..
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~ 135 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNE 135 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHT
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHH
Confidence 44455566666666655543333334555555554 3455555555543221 123333322 2221
Q ss_pred --------HH---HHHHHHHcCCcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCH-H---------HHHHHHHCCCcEEE
Q 045356 87 --------PA---ILETLAALGSNFDCASPSEIQAVLALSVSPDRIIYANACKPV-S---------HIKYAASVGVNLTT 145 (419)
Q Consensus 87 --------~~---v~~~l~~~G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~-~---------~l~~a~~~gi~~i~ 145 (419)
.. .++...+.|+.--|+|+.|+..+++. ..++-+++++++... . ....+++.|.+.++
T Consensus 136 ~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~~e~~~ir~~-~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iV 214 (259)
T 3tfx_A 136 QNCRLPMAEQVLSLAKMAKHSGADGVICSPLEVKKLHEN-IGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIV 214 (259)
T ss_dssp SCBSSCHHHHHHHHHHHHHHTTCCEEECCGGGHHHHHHH-HCSSSEEEECCCCCC-----------CHHHHHHTTCSEEE
T ss_pred hCCCCCHHHHHHHHHHHHHHhCCCEEEECHHHHHHHHhh-cCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEE
Confidence 12 23333456875556778999988875 223445666443321 1 16677777877666
Q ss_pred ecC
Q 045356 146 FDS 148 (419)
Q Consensus 146 vdS 148 (419)
+.+
T Consensus 215 vGr 217 (259)
T 3tfx_A 215 VGR 217 (259)
T ss_dssp ECH
T ss_pred ECh
Confidence 653
No 225
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=21.28 E-value=1.3e+02 Score=26.44 Aligned_cols=94 Identities=5% Similarity=0.038 Sum_probs=52.7
Q ss_pred HHHHHHHHHhcCCeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC---CC-C--CCCCHHHHHH
Q 045356 191 VAHLLGAAQASGLAVIGVAFHIGSEATNLDAFHAAIAEAKTVFETAARLGMTKMRVLDIGG---GF-A--CNPGFHEAAS 264 (419)
Q Consensus 191 ~~~~l~~~~~~~l~l~Glh~H~gs~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ldiGG---G~-~--~~~~~~~~~~ 264 (419)
+.+.++.++..|.....+++|.+......+.+....+.+.++.+.+++.| ..+-+=+.+. ++ + .-.+.++..+
T Consensus 86 ~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~G-v~l~lE~~~~~~~~~~~~~~~~~~~~~~~ 164 (281)
T 3u0h_A 86 LPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLG-MRVGLEYVGPHHLRHRRYPFVQSLADLKT 164 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGT-CEEEEECCCCGGGCCSSEECCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcC-CEEEEEeccccccccccccccCCHHHHHH
Confidence 44455666667777766655544333234556667777777888788888 6766656652 11 1 1123444333
Q ss_pred HHHHHHHhhCCCccCCCccEEEEcCcchhc
Q 045356 265 IIKDAIQTYFPNETAAGHLSVISEPGRFLA 294 (419)
Q Consensus 265 ~i~~~l~~~~~~~~~~~~~~li~EpGR~lv 294 (419)
.+...-. +...+++-+|-...
T Consensus 165 ----l~~~v~~-----~~vg~~~D~~h~~~ 185 (281)
T 3u0h_A 165 ----FWEAIGA-----PNVGALVDSYHWYT 185 (281)
T ss_dssp ----HHHHHCC-----TTEEEEEEHHHHHH
T ss_pred ----HHHHcCC-----CCeeEEeehhHHHH
Confidence 2333321 23778887776654
No 226
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=21.27 E-value=3.8e+02 Score=25.39 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=13.8
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeE
Q 045356 182 SKFGANPEEVAHLLGAAQASGLAV 205 (419)
Q Consensus 182 sRfGi~~ee~~~~l~~~~~~~l~l 205 (419)
+|.| -..++.++++.++..++.+
T Consensus 296 ~~~G-Git~~~~ia~~A~~~gi~~ 318 (383)
T 3toy_A 296 MKVG-GITGWLNVAGQADAASIPM 318 (383)
T ss_dssp TTTT-HHHHHHHHHHHHHHHTCCB
T ss_pred cccC-CHHHHHHHHHHHHHcCCEE
Confidence 4543 1345667777777777765
No 227
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.02 E-value=4.2e+02 Score=23.84 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=42.6
Q ss_pred cHHHHHHHHHcCC--cEEEcCHHHHHHHHHCCCCCCcEEEcCCC-C----CHHHHHHH---HHCCCcEE---EecCHHHH
Q 045356 86 EPAILETLAALGS--NFDCASPSEIQAVLALSVSPDRIIYANAC-K----PVSHIKYA---ASVGVNLT---TFDSIQEL 152 (419)
Q Consensus 86 ~~~v~~~l~~~G~--g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~-k----~~~~l~~a---~~~gi~~i---~vdS~~el 152 (419)
...+.+...+.|. =++|.+.+|++.++++|. +-|-+++-. + +.+.-... +..++..+ -+.+.+++
T Consensus 142 l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a--~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv 219 (258)
T 4a29_A 142 LESLLEYARSYGMEPLILINDENDLDIALRIGA--RFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEI 219 (258)
T ss_dssp HHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTC--SEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHH
T ss_pred HHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCC--cEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHH
Confidence 3566777777886 699999999999999985 333343211 1 11222222 22344222 34567888
Q ss_pred HHHHhHC
Q 045356 153 DKIRKWH 159 (419)
Q Consensus 153 ~~i~~~~ 159 (419)
.++.+.+
T Consensus 220 ~~l~~~G 226 (258)
T 4a29_A 220 EELRKLG 226 (258)
T ss_dssp HHHHHTT
T ss_pred HHHHHCC
Confidence 8877664
No 228
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=20.91 E-value=4.1e+02 Score=23.92 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 045356 58 LGVVISLYHQLISNLPMV 75 (419)
Q Consensus 58 ~~~l~~ni~~~~~~~~~~ 75 (419)
++.+-+-++++++..+++
T Consensus 81 ~~~~~~~v~~~r~~~~~~ 98 (271)
T 3nav_A 81 PDICFELIAQIRARNPET 98 (271)
T ss_dssp HHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 334455667777654333
No 229
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=20.81 E-value=3.9e+02 Score=24.40 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=38.0
Q ss_pred eeeccCCc------HHHHHHHHHcC----CcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHH
Q 045356 79 YAVKCNPE------PAILETLAALG----SNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAAS 138 (419)
Q Consensus 79 ~avKan~~------~~v~~~l~~~G----~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (419)
.-+|-|.. ...++.+.+.. +.++|-|.+|++.+.++|. +.|.+-+ .++++++.+++
T Consensus 172 vlikdNHi~~~G~i~~Av~~ar~~~~~~~IeVEv~tl~ea~eAl~aGa--D~I~LDn--~~~~~l~~av~ 237 (287)
T 3tqv_A 172 YLIKENHIRSAGGIAKAVTKAKKLDSNKVVEVEVTNLDELNQAIAAKA--DIVMLDN--FSGEDIDIAVS 237 (287)
T ss_dssp EEECTTTC----CHHHHHHHHHHHCTTSCEEEEESSHHHHHHHHHTTC--SEEEEES--CCHHHHHHHHH
T ss_pred EEEeHHHHHHhCCHHHHHHHHHhhCCCCcEEEEeCCHHHHHHHHHcCC--CEEEEcC--CCHHHHHHHHH
Confidence 45777752 22333344332 4789999999999999995 5566654 47889988875
No 230
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=20.73 E-value=3.7e+02 Score=24.20 Aligned_cols=79 Identities=8% Similarity=0.056 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCCceeeeeccCC-----cHHHHHHHHHcCC-cEEEcCH--HHH---H-HHHHCCCCCCcEEEcCC
Q 045356 59 GVVISLYHQLISNLPMVHPYYAVKCNP-----EPAILETLAALGS-NFDCASP--SEI---Q-AVLALSVSPDRIIYANA 126 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~~~~i~~avKan~-----~~~v~~~l~~~G~-g~~VaS~--~E~---~-~a~~~G~~~~~Ii~~gp 126 (419)
+.+.+.++++++. +++-+..-...|+ ....++.+.+.|+ |+-+... +|. . .+++.|+ +.|.+..|
T Consensus 77 ~~~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl--~~i~liap 153 (271)
T 1ujp_A 77 QGALELVREVRAL-TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGL--ETVFLLAP 153 (271)
T ss_dssp HHHHHHHHHHHHH-CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTC--EEECEECT
T ss_pred HHHHHHHHHHHhc-CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCC--ceEEEeCC
Confidence 4455677888876 3333333333442 3456677777776 5555443 333 2 2233465 35666777
Q ss_pred CCCHHHHHHHHHCC
Q 045356 127 CKPVSHIKYAASVG 140 (419)
Q Consensus 127 ~k~~~~l~~a~~~g 140 (419)
..+.+.++...+..
T Consensus 154 ~s~~eri~~ia~~~ 167 (271)
T 1ujp_A 154 TSTDARIATVVRHA 167 (271)
T ss_dssp TCCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhC
Confidence 66667777666543
No 231
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.64 E-value=3.5e+02 Score=24.37 Aligned_cols=13 Identities=0% Similarity=0.092 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHh
Q 045356 59 GVVISLYHQLISN 71 (419)
Q Consensus 59 ~~l~~ni~~~~~~ 71 (419)
+.+-+-++++|+.
T Consensus 80 ~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 80 SDCFDIITKVRAQ 92 (267)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3445566666655
No 232
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=20.51 E-value=4.2e+02 Score=22.92 Aligned_cols=87 Identities=10% Similarity=0.107 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhCCCCceeeeecc---CC------cHHHHHHHHHcCC-cEEEcC--------HHHHHHHHHC-CCCCC
Q 045356 59 GVVISLYHQLISNLPMVHPYYAVKC---NP------EPAILETLAALGS-NFDCAS--------PSEIQAVLAL-SVSPD 119 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~~~~i~~avKa---n~------~~~v~~~l~~~G~-g~~VaS--------~~E~~~a~~~-G~~~~ 119 (419)
+.+.+.++++++..++ + .+|- .+ ...+++.+.+.|+ .+.+++ .+-+..+++. |-+ -
T Consensus 102 ~~~~~~i~~v~~a~~p--v--~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~-i 176 (225)
T 1mzh_A 102 DFVVEELKEIFRETPS--A--VHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGR-I 176 (225)
T ss_dssp HHHHHHHHHHHHTCTT--S--EEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTS-S
T ss_pred HHHHHHHHHHHHHhcC--c--eEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCC-C
Confidence 3445667778776642 1 2554 22 2466788888898 565453 3444444443 212 3
Q ss_pred cEEEcCCCCCHHHHHHHHHCCCcEEEecCHH
Q 045356 120 RIIYANACKPVSHIKYAASVGVNLTTFDSIQ 150 (419)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~~ 150 (419)
.|+-+|..++.++...+++.|+..+-+.+.-
T Consensus 177 pVia~GGI~t~~da~~~l~aGA~~iG~s~~~ 207 (225)
T 1mzh_A 177 KVKASGGIRDLETAISMIEAGADRIGTSSGI 207 (225)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEESCHH
T ss_pred cEEEECCCCCHHHHHHHHHhCchHHHHccHH
Confidence 5788888889999998888888766666643
No 233
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=20.40 E-value=90 Score=30.40 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHHHHcCC-cEEEc----CHHHHHHHHHC-CCCCCcEEEcC
Q 045356 59 GVVISLYHQLISNLP-MVHPYYAVKCNPE------PAILETLAALGS-NFDCA----SPSEIQAVLAL-SVSPDRIIYAN 125 (419)
Q Consensus 59 ~~l~~ni~~~~~~~~-~~~i~~avKan~~------~~v~~~l~~~G~-g~~Va----S~~E~~~a~~~-G~~~~~Ii~~g 125 (419)
+...+.++++|+.++ ++.++ +.+|.. ..+++.|.+.|+ .++-- ..+.+..+++. ++ .|....
T Consensus 211 ~~d~e~v~avR~a~G~d~~l~--vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~dE 285 (425)
T 3vcn_A 211 NSVPKLFERAREVLGWDVHLL--HDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTT---PLAVGE 285 (425)
T ss_dssp TTTHHHHHHHHHHHCSSSEEE--EECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCS---CEEECT
T ss_pred HHHHHHHHHHHHHcCCCCEEE--EECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCC---CEEeCC
Confidence 345677888888884 56555 788862 455666777776 56522 34445444443 22 355555
Q ss_pred CCCCHHHHHHHHHCC-CcEEEec-----CHHHHHHHHhHCC
Q 045356 126 ACKPVSHIKYAASVG-VNLTTFD-----SIQELDKIRKWHP 160 (419)
Q Consensus 126 p~k~~~~l~~a~~~g-i~~i~vd-----S~~el~~i~~~~~ 160 (419)
...+..+++.+++.| +..++++ .+.+..++++.+.
T Consensus 286 ~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~ 326 (425)
T 3vcn_A 286 IFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFAD 326 (425)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHG
T ss_pred CcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHH
Confidence 555666666666654 3444444 3555555555443
No 234
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=20.33 E-value=3.5e+02 Score=25.81 Aligned_cols=56 Identities=18% Similarity=0.126 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeeCCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCc
Q 045356 187 NPEEVAHLLGAAQASGLAVIGVAFHIGSE--ATNLDAFHAAIAEAKTVFETAARLGMTK 243 (419)
Q Consensus 187 ~~ee~~~~l~~~~~~~l~l~Glh~H~gs~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 243 (419)
+.+++.++-+.+++.||.+.++.+-.... ........+.++.+++.++.+.+.| .+
T Consensus 62 ~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lG-i~ 119 (386)
T 3bdk_A 62 PLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAG-IP 119 (386)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTT-CC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 55777777777888899999886311110 0112234567788888888888888 45
No 235
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=20.32 E-value=4.5e+02 Score=23.26 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCC-cEEE--------cCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCcEEEecCH---HHHHH
Q 045356 87 PAILETLAALGS-NFDC--------ASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVNLTTFDSI---QELDK 154 (419)
Q Consensus 87 ~~v~~~l~~~G~-g~~V--------aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~~i~vdS~---~el~~ 154 (419)
..+++...+.|+ .+-| .+...+..+++. +. -.++.-+-..++.++..|...|+..+.+... ++++.
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~-lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~ 145 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VD-LPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGA 145 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CC-SCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cC-CCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHHH
Confidence 678888889998 8888 588888888875 22 2466666667788999999999875544221 45565
Q ss_pred HHhHCC--CCeEEEEEe
Q 045356 155 IRKWHP--KCELLIRIK 169 (419)
Q Consensus 155 i~~~~~--~~~v~lRv~ 169 (419)
+.+.+. ...+.+.++
T Consensus 146 l~~~a~~lGl~~lvev~ 162 (254)
T 1vc4_A 146 YLEEARRLGLEALVEVH 162 (254)
T ss_dssp HHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHCCCeEEEEEC
Confidence 544221 244444444
No 236
>3eye_A PTS system N-acetylgalactosamine-specific IIB component 1; structural genomics, phosphotransferase, PSI-2, protein structure initiative; 1.45A {Escherichia coli O157} SCOP: c.38.1.0
Probab=20.23 E-value=2.3e+02 Score=23.79 Aligned_cols=54 Identities=9% Similarity=0.163 Sum_probs=40.5
Q ss_pred HHHHHHHHHc-CCcEEEcCHHHHHHHHHCCCCCCcEEEcCCCCCHHHHHHHHHCCCc
Q 045356 87 PAILETLAAL-GSNFDCASPSEIQAVLALSVSPDRIIYANACKPVSHIKYAASVGVN 142 (419)
Q Consensus 87 ~~v~~~l~~~-G~g~~VaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gi~ 142 (419)
..+++...-. |+.+.+-|.+++....+.+.+..++++.- ++++++..+++.|+.
T Consensus 49 k~~lkmA~P~~gvk~~i~sve~ai~~~~~~~~~~~v~il~--k~p~d~~~lve~Gv~ 103 (168)
T 3eye_A 49 QKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLIC--RTPQTVRKLVEGGID 103 (168)
T ss_dssp GHHHHHHHHHHTCEEEEECHHHHHHHGGGCCTTCCEEEEE--SSHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCCCCeEEEEEHHHHHHHHhcccCCceEEEEE--CCHHHHHHHHHcCCC
Confidence 4567766667 99999999999988887665445666543 678888888888864
No 237
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=20.06 E-value=1.8e+02 Score=28.37 Aligned_cols=88 Identities=16% Similarity=0.272 Sum_probs=0.0
Q ss_pred CCcEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCC---cHHHHHHHHHcCC---cEEEcCHHH---------------
Q 045356 50 DEPFYVLDLGVVISLYHQLISNLP-MVHPYYAVKCNP---EPAILETLAALGS---NFDCASPSE--------------- 107 (419)
Q Consensus 50 ~tP~~v~d~~~l~~ni~~~~~~~~-~~~i~~avKan~---~~~v~~~l~~~G~---g~~VaS~~E--------------- 107 (419)
+||.+ ++.+.+.+-++.+++.++ .-..-..+=+|+ ..+.++.|.+.|+ .+.+-|..+
T Consensus 113 Gtpt~-l~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~ 191 (457)
T 1olt_A 113 GTPTY-LNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFI 191 (457)
T ss_dssp SCGGG-SCHHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHH
T ss_pred CCccc-CCHHHHHHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHH
Q ss_pred ---HHHHHHCCCC--CCcEEEcCCCCCHHHHHHHHH
Q 045356 108 ---IQAVLALSVS--PDRIIYANACKPVSHIKYAAS 138 (419)
Q Consensus 108 ---~~~a~~~G~~--~~~Ii~~gp~k~~~~l~~a~~ 138 (419)
++.++++|+. .-++++.-|..+.+++..-++
T Consensus 192 ~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~ 227 (457)
T 1olt_A 192 FALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLK 227 (457)
T ss_dssp HHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHH
No 238
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=20.05 E-value=4.9e+02 Score=24.58 Aligned_cols=56 Identities=7% Similarity=0.125 Sum_probs=33.2
Q ss_pred CHHHHHHHHHCCCCCCcEEEc-CCCCCHHH---HHHHHHC--CCcEE--EecCHHHHHHHHhHCCC
Q 045356 104 SPSEIQAVLALSVSPDRIIYA-NACKPVSH---IKYAASV--GVNLT--TFDSIQELDKIRKWHPK 161 (419)
Q Consensus 104 S~~E~~~a~~~G~~~~~Ii~~-gp~k~~~~---l~~a~~~--gi~~i--~vdS~~el~~i~~~~~~ 161 (419)
..+.++.+.++|+ +-|.+. ....++.. ++.+.+. ++.++ ++.+.++++.+.+.+..
T Consensus 109 ~~~~~~~lieaGv--d~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD 172 (366)
T 4fo4_A 109 NEERVKALVEAGV--DVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVS 172 (366)
T ss_dssp CHHHHHHHHHTTC--SEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCC--CEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCC
Confidence 3677888888886 345552 22233332 3344333 55433 58889999988887644
Done!