BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045359
         (249 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P38822|BZZ1_YEAST Protein BZZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
           S288c) GN=BZZ1 PE=1 SV=1
          Length = 633

 Score = 35.0 bits (79), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 37  LREEQRWLREEQRWLREEQRWIRERESLLREISELKLQIKA-LENRNLSDGASVSVSDTI 95
            +E  +W++   +WL++ +++ RER  L ++ SE   ++ A   N+  S    +SV DT 
Sbjct: 15  FKETHKWVQNNLKWLKDIEQFYRERAKLEKDYSERLSRLSAEYFNKKSSTSVPISVGDTP 74

Query: 96  SNIAGLLQ 103
           +   G ++
Sbjct: 75  TTTPGSIE 82


>sp|Q10213|SRS2_SCHPO ATP-dependent DNA helicase srs2 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=srs2 PE=3 SV=1
          Length = 887

 Score = 32.7 bits (73), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 19/165 (11%)

Query: 59  RERESLLREISELKLQIKALENRNLSDGASVSVSDTISNIAGLLQMLKEKNMIA--ERAT 116
           R  +S L+ +      I  LENR LS+G S ++SD    + G+L  +K    +    + T
Sbjct: 474 RNDKSFLKSLKSFLCSISKLENRYLSNGHSATLSDL---LLGILSEIKYYEYLVRKNKET 530

Query: 117 VAEK-EKFEEEEQQKEVVKVLEGEKKKRKALRVGSEGEDVKAMQEELLKLGFFSSEEDME 175
           V EK E   E  QQ + +  +  E   + +  V         +Q  L ++   + E+   
Sbjct: 531 VEEKWENVMELVQQSDNISCIFYELDYKISTIV--------LLQNFLTQIALVNEEQKEG 582

Query: 176 YSSFSTGTERAVKTWQAAKGVTEDGIMTSELLERLYMEHRVEDTD 220
            S   T     + T  AAKG+    +    L E +    R +D D
Sbjct: 583 ESQKVT-----ISTLHAAKGLEWPVVFLPCLCENIIPHSRSDDLD 622


>sp|A6QQS3|SPERT_BOVIN Spermatid-associated protein OS=Bos taurus GN=SPERT PE=2 SV=2
          Length = 455

 Score = 32.3 bits (72), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 16/81 (19%)

Query: 30  DHEEIRWLREEQRWLREEQRWL---REEQRWIRERESLLREISELKLQIKALENRNLSDG 86
           +++ ++ LR+E R L+EE R L   REE R  +E    L E ++LKLQ K          
Sbjct: 369 ENQSLQVLRDENRLLQEENRALHALREEHRLFQEENKALWENNKLKLQQKL--------- 419

Query: 87  ASVSVSDTISNIAGLLQMLKE 107
               V DT++ +   ++ML E
Sbjct: 420 ----VIDTVTEVTARMEMLIE 436


>sp|Q86VH2|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1
          Length = 1401

 Score = 30.8 bits (68), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 13/125 (10%)

Query: 23   RATSSSSDH-----EEIRWLREEQRWLREEQRWLREEQRWIRERESLLREISELKLQIKA 77
            + +  S DH     E+ +WL EE   +  +++ L E +  +++RE+++ +   L  +   
Sbjct: 909  KGSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAIVSKKEALLQEKSH 968

Query: 78   LENRNLSDGASVSV-SDTISNIAGLL-QMLKEKNMIAERATVAEKEKFEEEEQQKEVVKV 135
            LEN+ L    +++  S  IS    LL Q L EKN+  + +T  EK K  E+      V+V
Sbjct: 969  LENKKLRSSQALNTDSLKISTRLNLLEQELSEKNVQLQTSTAEEKTKISEQ------VEV 1022

Query: 136  LEGEK 140
            L+ EK
Sbjct: 1023 LQKEK 1027


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.126    0.342 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,780,844
Number of Sequences: 539616
Number of extensions: 3527541
Number of successful extensions: 27295
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 832
Number of HSP's that attempted gapping in prelim test: 23151
Number of HSP's gapped (non-prelim): 3243
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)