Your job contains 1 sequence.
>045361
LPTQTNRASHLRPLCAVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLGVSAAAFAPAA
AVGVAPGAPGAEAPASVEEEKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEG
LPKKFKEGVSKDDAEAAKKQLEEAGAKF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045361
(148 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086435 - symbol:RPL12-A "ribosomal protein L1... 410 2.6e-38 1
TAIR|locus:2086450 - symbol:RPL12-C "ribosomal protein L1... 393 1.7e-36 1
TAIR|locus:2086440 - symbol:RPL12-B "ribosomal protein L1... 321 7.1e-29 1
TIGR_CMR|GSU_2864 - symbol:GSU_2864 "ribosomal protein L7... 208 6.7e-17 1
UNIPROTKB|P0A7K2 - symbol:rplL species:83333 "Escherichia... 207 8.6e-17 1
TIGR_CMR|DET_0990 - symbol:DET_0990 "ribosomal protein L7... 197 9.8e-16 1
TIGR_CMR|CHY_2320 - symbol:CHY_2320 "ribosomal protein L7... 191 4.2e-15 1
TIGR_CMR|CBU_0229 - symbol:CBU_0229 "ribosomal protein L7... 188 8.8e-15 1
TIGR_CMR|CJE_0527 - symbol:CJE_0527 "ribosomal protein L7... 188 8.8e-15 1
UNIPROTKB|Q9KV31 - symbol:rplL "50S ribosomal protein L7/... 180 6.2e-14 1
TIGR_CMR|VC_0327 - symbol:VC_0327 "ribosomal protein L7/L... 180 6.2e-14 1
TAIR|locus:2115385 - symbol:AT4G36420 species:3702 "Arabi... 180 6.2e-14 1
TAIR|locus:2020678 - symbol:AT1G70190 species:3702 "Arabi... 136 2.6e-13 2
GENEDB_PFALCIPARUM|PFB0545c - symbol:PFB0545c "ribosomal ... 125 2.1e-12 2
UNIPROTKB|O96202 - symbol:PFB0545c "Mitochondrial ribosom... 125 2.1e-12 2
TIGR_CMR|SO_0223 - symbol:SO_0223 "ribosomal protein L7/L... 163 3.9e-12 1
UNIPROTKB|P02394 - symbol:rplL "50S ribosomal protein L7/... 160 8.2e-12 1
SGD|S000003036 - symbol:MNP1 "Protein associated with the... 159 1.0e-11 1
TIGR_CMR|SPO_3509 - symbol:SPO_3509 "ribosomal protein L7... 158 1.3e-11 1
TAIR|locus:2120116 - symbol:AT4G37660 species:3702 "Arabi... 158 1.3e-11 1
TIGR_CMR|BA_0100 - symbol:BA_0100 "ribosomal protein L7/L... 156 2.2e-11 1
TIGR_CMR|CPS_4770 - symbol:CPS_4770 "ribosomal protein L7... 156 2.2e-11 1
TIGR_CMR|ECH_0953 - symbol:ECH_0953 "ribosomal protein L7... 152 5.8e-11 1
UNIPROTKB|P0A5V2 - symbol:rplL "50S ribosomal protein L7/... 149 1.2e-10 1
TIGR_CMR|APH_1025 - symbol:APH_1025 "ribosomal protein L7... 147 2.0e-10 1
POMBASE|SPCC4B3.09c - symbol:SPCC4B3.09c "mitochondrial r... 146 2.5e-10 1
CGD|CAL0006345 - symbol:orf19.2275 species:5476 "Candida ... 143 5.2e-10 1
UNIPROTKB|E2QVI3 - symbol:MRPL12 "Uncharacterized protein... 97 6.2e-10 2
UNIPROTKB|P52815 - symbol:MRPL12 "39S ribosomal protein L... 97 6.2e-10 2
UNIPROTKB|Q7YR75 - symbol:MRPL12 "39S ribosomal protein L... 96 8.0e-10 2
MGI|MGI:1926273 - symbol:Mrpl12 "mitochondrial ribosomal ... 96 8.8e-10 2
UNIPROTKB|P52827 - symbol:MRPL12 "39S ribosomal protein L... 96 9.2e-10 2
DICTYBASE|DDB_G0274407 - symbol:DDB_G0274407 "39S ribosom... 140 1.1e-09 1
TAIR|locus:2080369 - symbol:AT3G06040 species:3702 "Arabi... 139 1.4e-09 1
GENEDB_PFALCIPARUM|PFE1225w - symbol:PFE1225w "50S riboso... 121 1.5e-09 2
UNIPROTKB|Q8I3L9 - symbol:PFE1225w "Organelle ribosomal p... 121 1.5e-09 2
UNIPROTKB|A5PJ86 - symbol:MRPL12 "Uncharacterized protein... 96 1.6e-09 2
RGD|1588559 - symbol:Mrpl12 "mitochondrial ribosomal prot... 95 4.7e-09 2
UNIPROTKB|E1C3B6 - symbol:MRPL12 "Uncharacterized protein... 129 1.6e-08 1
UNIPROTKB|F6XRN5 - symbol:MRPL12 "Uncharacterized protein... 92 4.3e-08 2
UNIPROTKB|B4DLN1 - symbol:SLC25A10 "Uncharacterized prote... 92 4.3e-08 2
UNIPROTKB|H9KUU7 - symbol:LOC100848134 "Uncharacterized p... 91 5.4e-08 2
ASPGD|ASPL0000042202 - symbol:AN2057 species:162425 "Emer... 122 8.7e-08 1
FB|FBgn0011787 - symbol:mRpL12 "mitochondrial ribosomal p... 116 3.8e-07 1
TAIR|locus:2056921 - symbol:AT2G03130 species:3702 "Arabi... 114 6.1e-07 1
ZFIN|ZDB-GENE-050417-187 - symbol:mrpl12 "mitochondrial r... 115 3.7e-06 1
WB|WBGene00012361 - symbol:mrpl-12 species:6239 "Caenorha... 106 4.3e-06 1
UNIPROTKB|O18180 - symbol:mrpl-12 "Protein MRPL-12" speci... 106 4.3e-06 1
>TAIR|locus:2086435 [details] [associations]
symbol:RPL12-A "ribosomal protein L12-A" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009295
"nucleoid" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000311 "plastid large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0009506 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 GO:GO:0009941 GO:GO:0003735 GO:GO:0009535
GO:GO:0009295 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 EMBL:AY054567 EMBL:AY056124 EMBL:AY136308 EMBL:BT000419
EMBL:BT006058 EMBL:BT006568 EMBL:Z17719 IPI:IPI00541602 PIR:A53394
RefSeq:NP_189421.1 UniGene:At.20381 UniGene:At.251
ProteinModelPortal:P36210 SMR:P36210 IntAct:P36210 STRING:P36210
PRIDE:P36210 ProMEX:P36210 EnsemblPlants:AT3G27830.1 GeneID:822403
KEGG:ath:AT3G27830 GeneFarm:74 TAIR:At3g27830 HOGENOM:HOG000248813
InParanoid:P36210 KO:K02935 OMA:TIDEMMS PhylomeDB:P36210
ProtClustDB:CLSN2685034 Genevestigator:P36210 GermOnline:AT3G27830
GO:GO:0000311 InterPro:IPR015608 PANTHER:PTHR11809:SF6
TIGRFAMs:TIGR00855 Uniprot:P36210
Length = 191
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 89/145 (61%), Positives = 104/145 (71%)
Query: 3 TQTNRASHLRPLCAVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXX 62
T T+RA+HLRP+ AVEAPEKIEK+ +EISSLTL+E LVDYLQDK
Sbjct: 46 TLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAA 105
Query: 63 XXXXXXXXXXXXXXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLP 122
+TEFDVVI+EVPS++RIAVIKAVR LT+LALKEAK+LIEGLP
Sbjct: 106 VAAPADGGAAAVVEE---QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLP 162
Query: 123 KKFKEGVSKDDAEAAKKQLEEAGAK 147
KKFKEG++KD+AE AKK LEEAGAK
Sbjct: 163 KKFKEGITKDEAEEAKKTLEEAGAK 187
>TAIR|locus:2086450 [details] [associations]
symbol:RPL12-C "ribosomal protein L12-C" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IEP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0000311 "plastid large ribosomal subunit"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0042742
GO:GO:0003735 GO:GO:0009535 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 UniGene:At.20381 UniGene:At.251 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 EMBL:AY037241
EMBL:AY136300 EMBL:AY143956 IPI:IPI00540051 PIR:C53394
RefSeq:NP_189423.1 UniGene:At.71465 ProteinModelPortal:P36212
SMR:P36212 STRING:P36212 EnsemblPlants:AT3G27850.1 GeneID:822405
KEGG:ath:AT3G27850 GeneFarm:78 TAIR:At3g27850 InParanoid:P36212
OMA:SHRAINL PhylomeDB:P36212 Genevestigator:P36212
GermOnline:AT3G27850 Uniprot:P36212
Length = 187
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 86/145 (59%), Positives = 103/145 (71%)
Query: 3 TQTNRASHLRPLCAVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXX 62
+ ++RA +LRP+ AVEAPEKIEK+ +EISSLTL+E LVDYLQDK
Sbjct: 42 SSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAA 101
Query: 63 XXXXXXXXXXXXXXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLP 122
+TEFDVVI+EVPS++RIAVIKAVR LT+LALKEAK+LIEGLP
Sbjct: 102 VAAPADGGAAAVVEE---QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLP 158
Query: 123 KKFKEGVSKDDAEAAKKQLEEAGAK 147
KKFKEG++KD+AE AKK LEEAGAK
Sbjct: 159 KKFKEGITKDEAEEAKKTLEEAGAK 183
>TAIR|locus:2086440 [details] [associations]
symbol:RPL12-B "ribosomal protein L12-B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0015934 "large ribosomal subunit" evidence=ISS]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0000311 "plastid large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
EMBL:AP000371 SUPFAM:SSF48300 EMBL:X68046 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 IPI:IPI00536282 PIR:B53394
RefSeq:NP_189422.1 UniGene:At.53525 ProteinModelPortal:P36211
SMR:P36211 STRING:P36211 EnsemblPlants:AT3G27840.1 GeneID:822404
KEGG:ath:AT3G27840 GeneFarm:75 TAIR:At3g27840 eggNOG:KOG1715
InParanoid:P36211 OMA:YLHPISA PhylomeDB:P36211
Genevestigator:P36211 GermOnline:AT3G27840 Uniprot:P36211
Length = 193
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 71/145 (48%), Positives = 93/145 (64%)
Query: 3 TQTNRASHLRPLCAVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXX 62
T ++RA +L P+ AV+ P+KI+K+ +EISSLTL+E LVDY+QDK
Sbjct: 47 TLSHRAIYLHPISAVKTPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAA 106
Query: 63 XXXXXXXXXXXXXXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLP 122
+T FDVVI++VP RIAVI A+R +T+L+L E+K+LIEG P
Sbjct: 107 LPPPLDNGGATASVER--QTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFP 164
Query: 123 KKFKEGVSKDDAEAAKKQLEEAGAK 147
KKFKEGV+KD+AE K QLEEAGAK
Sbjct: 165 KKFKEGVTKDEAEEDKTQLEEAGAK 189
>TIGR_CMR|GSU_2864 [details] [associations]
symbol:GSU_2864 "ribosomal protein L7/L12" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:NP_953906.1 ProteinModelPortal:Q748Y5 SMR:Q748Y5
PRIDE:Q748Y5 GeneID:2686769 KEGG:gsu:GSU2864 PATRIC:22028579
BioCyc:GSUL243231:GH27-2845-MONOMER Uniprot:Q748Y5
Length = 127
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 49/118 (41%), Positives = 64/118 (54%)
Query: 30 ISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVID 89
I ++T+ E+ LV L+DK KTEFDV++
Sbjct: 13 IENMTVLELAELVKELEDKFGVSAAAPVAVAAAAAPAAAAEAAEE------KTEFDVILK 66
Query: 90 EVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLEEAGAK 147
+N +I VIK VR LT L LKEAKDL++G PK K GVSK++AE AKKQL E+GA+
Sbjct: 67 SAGAN-KIGVIKVVRALTGLGLKEAKDLVDGAPKPVKNGVSKEEAEEAKKQLVESGAE 123
>UNIPROTKB|P0A7K2 [details] [associations]
symbol:rplL species:83333 "Escherichia coli K-12"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U00006 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 EMBL:V00339 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855 PDB:3SGF PDB:3UOS
PDBsum:3SGF PDBsum:3UOS PDB:2GYA PDB:2GYC PDBsum:2GYA PDBsum:2GYC
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:M38301 PIR:S12575
RefSeq:NP_418413.1 RefSeq:YP_491475.1 PDB:1CTF PDB:1RQS PDB:1RQT
PDB:1RQU PDB:1RQV PDB:2BCW PDB:2XTG PDB:2XUX PDBsum:1CTF
PDBsum:1RQS PDBsum:1RQT PDBsum:1RQU PDBsum:1RQV PDBsum:2BCW
PDBsum:2XTG PDBsum:2XUX ProteinModelPortal:P0A7K2 SMR:P0A7K2
DIP:DIP-36009N IntAct:P0A7K2 MINT:MINT-1277405 PhosSite:P0810430
SWISS-2DPAGE:P0A7K2 PaxDb:P0A7K2 PRIDE:P0A7K2
EnsemblBacteria:EBESCT00000000836 EnsemblBacteria:EBESCT00000004740
EnsemblBacteria:EBESCT00000004741 EnsemblBacteria:EBESCT00000016504
GeneID:12930512 GeneID:948489 KEGG:ecj:Y75_p3211 KEGG:eco:b3986
PATRIC:32123493 EchoBASE:EB0866 EcoGene:EG10873
BioCyc:EcoCyc:EG10873-MONOMER BioCyc:ECOL316407:JW3949-MONOMER
EvolutionaryTrace:P0A7K2 Genevestigator:P0A7K2 Uniprot:P0A7K2
Length = 121
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 44/67 (65%), Positives = 51/67 (76%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KTEFDV++ +N ++AVIKAVR T L LKEAKDL+E P KEGVSKDDAEA KK
Sbjct: 52 KTEFDVILKAAGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKA 110
Query: 141 LEEAGAK 147
LEEAGA+
Sbjct: 111 LEEAGAE 117
>TIGR_CMR|DET_0990 [details] [associations]
symbol:DET_0990 "ribosomal protein L7/L12" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
OMA:TIDEMMS TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_181713.1 ProteinModelPortal:Q3Z7T6 SMR:Q3Z7T6
STRING:Q3Z7T6 GeneID:3229746 KEGG:det:DET0990 PATRIC:21609029
BioCyc:DETH243164:GJNF-991-MONOMER Uniprot:Q3Z7T6
Length = 124
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 48/124 (38%), Positives = 69/124 (55%)
Query: 23 IEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKT 82
I+++ + I +T+ E+ LV L+ + KT
Sbjct: 3 IDEMMSAIKGMTVIELSELVKALEKEFGVSAAVAVAAPAAGGAAVAAAAEEE------KT 56
Query: 83 EFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLE 142
EF+V++ +V +N +I VIKAVR LT+L LKEAKD++E PK KE VSK++A+AAKK LE
Sbjct: 57 EFNVILKDVGAN-KINVIKAVRELTSLGLKEAKDMVEAAPKAVKENVSKEEADAAKKALE 115
Query: 143 EAGA 146
AGA
Sbjct: 116 AAGA 119
>TIGR_CMR|CHY_2320 [details] [associations]
symbol:CHY_2320 "ribosomal protein L7/L12" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_361129.1 ProteinModelPortal:Q3A9Q5 SMR:Q3A9Q5
STRING:Q3A9Q5 GeneID:3728067 KEGG:chy:CHY_2320 PATRIC:21277707
OMA:MADLKDF BioCyc:CHYD246194:GJCN-2319-MONOMER Uniprot:Q3A9Q5
Length = 127
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/125 (36%), Positives = 64/125 (51%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 81
K++++ + SLT+ E+ LV +++ K
Sbjct: 3 KVQEILEAVKSLTVLELAELVKAFEEEFGVSAAAPVAVAAAPAAGAAAAAPAQEE----K 58
Query: 82 TEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQL 141
TEFDV++ P ++ VIK VR +T L LKE+KDL++G PK KE VSK DAEA K +L
Sbjct: 59 TEFDVILVS-PGAQKVNVIKVVREITGLGLKESKDLVDGAPKPVKEKVSKADAEAIKAKL 117
Query: 142 EEAGA 146
EE GA
Sbjct: 118 EEVGA 122
>TIGR_CMR|CBU_0229 [details] [associations]
symbol:CBU_0229 "ribosomal protein L7/L12" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:CP001019 EMBL:U86688
RefSeq:YP_002304195.1 ProteinModelPortal:B6J272 SMR:B6J272
STRING:B6J272 PRIDE:B6J272 GeneID:7014192 GenomeReviews:CP001019_GR
KEGG:cbg:CbuG_1776 PATRIC:17914649 Uniprot:B6J272
Length = 126
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KTEF+V + N +I VIKA+RT+T L LKEAKDL+E +P KE VSK++AE KK+
Sbjct: 57 KTEFNVKMVSFGDN-KIGVIKAIRTITGLGLKEAKDLVESVPSVVKESVSKEEAEKIKKE 115
Query: 141 LEEAGAK 147
LEEAGAK
Sbjct: 116 LEEAGAK 122
>TIGR_CMR|CJE_0527 [details] [associations]
symbol:CJE_0527 "ribosomal protein L7/L12" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:YP_178545.1 ProteinModelPortal:Q5HVZ0 SMR:Q5HVZ0
STRING:Q5HVZ0 GeneID:3231288 KEGG:cjr:CJE0527 PATRIC:20042776
BioCyc:CJEJ195099:GJC0-542-MONOMER Uniprot:Q5HVZ0
Length = 125
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KTEFD+V+ + + +I VIK VR LT L LKEAKD +E P KEGV+K +AE AKKQ
Sbjct: 56 KTEFDIVLTDGGAK-KIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEGVAKAEAEEAKKQ 114
Query: 141 LEEAGAK 147
LEEAGAK
Sbjct: 115 LEEAGAK 121
>UNIPROTKB|Q9KV31 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
+TEF+V++ +N ++AVIKAVR T L LKEAK L++G P KE VSK++AEA KK+
Sbjct: 52 QTEFNVILAAAGAN-KVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKE 110
Query: 141 LEEAGA 146
LEEAGA
Sbjct: 111 LEEAGA 116
>TIGR_CMR|VC_0327 [details] [associations]
symbol:VC_0327 "ribosomal protein L7/L12" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
+TEF+V++ +N ++AVIKAVR T L LKEAK L++G P KE VSK++AEA KK+
Sbjct: 52 QTEFNVILAAAGAN-KVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKE 110
Query: 141 LEEAGA 146
LEEAGA
Sbjct: 111 LEEAGA 116
>TAIR|locus:2115385 [details] [associations]
symbol:AT4G36420 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL161589 EMBL:Z99708
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 SUPFAM:SSF48300
InterPro:IPR015608 PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855
OMA:TMDLTEI HSSP:P02392 EMBL:AF370294 EMBL:AY052308 EMBL:AY063041
IPI:IPI00520865 PIR:H85429 RefSeq:NP_195360.1 UniGene:At.4606
ProteinModelPortal:O23238 SMR:O23238 STRING:O23238 PaxDb:O23238
PRIDE:O23238 EnsemblPlants:AT4G36420.1 GeneID:829794
KEGG:ath:AT4G36420 TAIR:At4g36420 InParanoid:O23238
PhylomeDB:O23238 ProtClustDB:CLSN2915904 Genevestigator:O23238
Uniprot:O23238
Length = 179
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 46/133 (34%), Positives = 66/133 (49%)
Query: 21 EKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXX------XXXXXXXXXXXXX 74
E + K+ E+S+LTL E +L + L+ KL
Sbjct: 43 ENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSLPGSGASKSAGGEGK 102
Query: 75 XXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDA 134
KT FDV++ + ++I VIK VRT+T L LKEAKDL+E P K+GVSK++A
Sbjct: 103 EKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAPTLLKKGVSKEEA 162
Query: 135 EAAKKQLEEAGAK 147
E ++L+ GAK
Sbjct: 163 EKIIEKLKAVGAK 175
>TAIR|locus:2020678 [details] [associations]
symbol:AT1G70190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC002062 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
SUPFAM:SSF48300 InterPro:IPR015608 PANTHER:PTHR11809:SF6
OMA:MYCTRYC HSSP:P29396 EMBL:AF360123 EMBL:AY051024 IPI:IPI00545010
PIR:G96724 RefSeq:NP_001185360.1 RefSeq:NP_564986.1
UniGene:At.10300 ProteinModelPortal:O04527 SMR:O04527 STRING:O04527
PaxDb:O04527 PRIDE:O04527 EnsemblPlants:AT1G70190.1
EnsemblPlants:AT1G70190.2 GeneID:843355 KEGG:ath:AT1G70190
TAIR:At1g70190 eggNOG:NOG238976 InParanoid:O04527 PhylomeDB:O04527
ProtClustDB:CLSN2689119 ArrayExpress:O04527 Genevestigator:O04527
Uniprot:O04527
Length = 208
Score = 136 (52.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KT F++ ++ ++A+I +IK +R+ T+L LKEAK L+E P K G+SK++ E ++
Sbjct: 138 KTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPAILKAGLSKEEGEKILEK 197
Query: 141 LEEAGAK 147
L+ GAK
Sbjct: 198 LKALGAK 204
Score = 51 (23.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 1 LPTQTNRASHLRPLCAVEAP-EKIEKLATEISSLTLQEVCNLVDYLQDK 48
LPT + A+ P P +++ +L EISSLTL E+ L + K
Sbjct: 49 LPTDYDPAT-FDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKK 96
>GENEDB_PFALCIPARUM|PFB0545c [details] [associations]
symbol:PFB0545c "ribosomal protein L7/L12,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 125 (49.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
K+ F+V +++ +I IK +R +TN+ LKEAKD++E P ++ V + AE KK
Sbjct: 185 KSTFNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSEKAEEMKKS 244
Query: 141 LEEAGA 146
E+ GA
Sbjct: 245 FEQLGA 250
Score = 61 (26.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 21 EKIEKLATEISSLTLQEVCNLVDYLQDKL 49
+K+ KL EI +LTL E +L D Q+KL
Sbjct: 79 KKVLKLVDEILNLTLIEAADLCDLCQEKL 107
>UNIPROTKB|O96202 [details] [associations]
symbol:PFB0545c "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 125 (49.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
K+ F+V +++ +I IK +R +TN+ LKEAKD++E P ++ V + AE KK
Sbjct: 185 KSTFNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSEKAEEMKKS 244
Query: 141 LEEAGA 146
E+ GA
Sbjct: 245 FEQLGA 250
Score = 61 (26.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 21 EKIEKLATEISSLTLQEVCNLVDYLQDKL 49
+K+ KL EI +LTL E +L D Q+KL
Sbjct: 79 KKVLKLVDEILNLTLIEAADLCDLCQEKL 107
>TIGR_CMR|SO_0223 [details] [associations]
symbol:SO_0223 "ribosomal protein L7/L12" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:TMDLTEI
RefSeq:NP_715863.1 ProteinModelPortal:Q8EK75 SMR:Q8EK75
PRIDE:Q8EK75 GeneID:1168106 KEGG:son:SO_0223 PATRIC:23520139
Uniprot:Q8EK75
Length = 122
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
+TEF+V++ N ++AVIKA+R T L LKEAK + E P KEGVSK++AEA KK+
Sbjct: 53 QTEFNVILTAHGDN-KVAVIKAIRGATGLGLKEAKAMSEAAPVAVKEGVSKEEAEALKKE 111
Query: 141 LEEAGA 146
L EAGA
Sbjct: 112 LVEAGA 117
>UNIPROTKB|P02394 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL009126
GenomeReviews:AL009126_GR Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 EMBL:D50303 ProtClustDB:PRK00157
EMBL:L24376 PIR:F69695 RefSeq:NP_387986.1 ProteinModelPortal:P02394
SMR:P02394 EnsemblBacteria:EBBACT00000003778 GeneID:935952
KEGG:bsu:BSU01050 PATRIC:18971719 GenoList:BSU01050 OMA:QKSVMEI
BioCyc:BSUB:BSU01050-MONOMER Uniprot:P02394
Length = 123
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
++EFD+++ S +I VIK VR +T L LKEAK+L++ PK KEG++K++AE K +
Sbjct: 54 QSEFDLILAGAGSQ-KIKVIKVVREITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAK 112
Query: 141 LEEAGA 146
LEE GA
Sbjct: 113 LEEVGA 118
>SGD|S000003036 [details] [associations]
symbol:MNP1 "Protein associated with the mitochondrial
nucleoid" species:4932 "Saccharomyces cerevisiae" [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0009060 "aerobic respiration" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
SGD:S000003036 HAMAP:MF_00368 EMBL:BK006941 GO:GO:0006412
GO:GO:0005840 GO:GO:0042645 GO:GO:0003735 GO:GO:0009060
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 OrthoDB:EOG49CTJ7
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
EMBL:Z72591 PIR:S64075 RefSeq:NP_011447.1 ProteinModelPortal:P53163
SMR:P53163 DIP:DIP-6428N IntAct:P53163 MINT:MINT-705819
STRING:P53163 PaxDb:P53163 PeptideAtlas:P53163 EnsemblFungi:YGL068W
GeneID:852811 KEGG:sce:YGL068W CYGD:YGL068w
GeneTree:ENSGT00390000000190 OMA:GVAKPPN NextBio:972342
Genevestigator:P53163 GermOnline:YGL068W Uniprot:P53163
Length = 194
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 51/157 (32%), Positives = 67/157 (42%)
Query: 3 TQTNRASHLRPLCAVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLX------------ 50
T T SH + V+ P KI K+ +IS LTL E +L++ L+ L
Sbjct: 36 TTTTAPSHKDDVRPVD-P-KISKIVQDISQLTLLETSSLINELKTVLNIPEISMPMGGFM 93
Query: 51 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLA 110
KT F V +D + + VIK V+ L L+
Sbjct: 94 AGAAGAGAGNVPSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLS 153
Query: 111 LKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLEEAGAK 147
L EAK +E PK KE V+KDDAE KK LE+ GAK
Sbjct: 154 LVEAKKFVEAAPKVLKENVAKDDAEKIKKTLEDLGAK 190
>TIGR_CMR|SPO_3509 [details] [associations]
symbol:SPO_3509 "ribosomal protein L7/L12" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:MADLKDF RefSeq:YP_168704.1
ProteinModelPortal:Q5LMQ4 SMR:Q5LMQ4 GeneID:3194266
KEGG:sil:SPO3509 PATRIC:23380489 Uniprot:Q5LMQ4
Length = 125
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/125 (37%), Positives = 62/125 (49%)
Query: 23 IEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKT 82
++ LA I LTL E L + L+D+ KT
Sbjct: 4 LKALAESIVGLTLLEAQELKNILKDEYGIEPAAGGAVMVAAAGGDAGAAAEEE-----KT 58
Query: 83 EFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLE 142
EFDVV+ ++ +I VIK VR +T L LKEAKDL+E K KEGV+K +AE K +LE
Sbjct: 59 EFDVVLKNAGAS-KINVIKEVRGITGLGLKEAKDLVEA-GGKIKEGVAKAEAEEIKAKLE 116
Query: 143 EAGAK 147
AGA+
Sbjct: 117 AAGAE 121
>TAIR|locus:2120116 [details] [associations]
symbol:AT4G37660 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
EMBL:AL035605 EMBL:AL161591 GO:GO:0003735 GO:GO:0008233
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015608
PANTHER:PTHR11809:SF6 HSSP:P02392 UniGene:At.31233 UniGene:At.31234
EMBL:AY074583 EMBL:AY094012 EMBL:AY088083 IPI:IPI00535366
PIR:T04723 RefSeq:NP_195481.1 ProteinModelPortal:Q9SZF8 SMR:Q9SZF8
STRING:Q9SZF8 PaxDb:Q9SZF8 PRIDE:Q9SZF8 EnsemblPlants:AT4G37660.1
GeneID:829920 KEGG:ath:AT4G37660 TAIR:At4g37660 InParanoid:Q9SZF8
OMA:CAVASPE PhylomeDB:Q9SZF8 ProtClustDB:CLSN2685808
ArrayExpress:Q9SZF8 Genevestigator:Q9SZF8 Uniprot:Q9SZF8
Length = 167
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/146 (30%), Positives = 69/146 (47%)
Query: 5 TNRASHLRPLCAVEAPE----KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXX 60
T +S R LCAV +PE K+E++A ++ L L + L DY
Sbjct: 20 TPLSSATRHLCAVASPEARTKKLERIADDL--LKLNRI-ELYDYSLLFSHKIGLNRYGSA 76
Query: 61 XXXXXXXXXXXXXXXXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEG 120
KT FDV +++ + ++I VIK +R T+L LKEAK L+E
Sbjct: 77 VAVTGSVGDASASTETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEK 136
Query: 121 LPKKFKEGVSKDDAEAAKKQLEEAGA 146
P K G++K++AE ++L+ GA
Sbjct: 137 APVIVKNGLTKEEAEKIMEKLKAVGA 162
>TIGR_CMR|BA_0100 [details] [associations]
symbol:BA_0100 "ribosomal protein L7/L12" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:NP_842668.1 RefSeq:YP_016704.1 RefSeq:YP_026386.1
ProteinModelPortal:Q81VU0 SMR:Q81VU0 DNASU:1085015
EnsemblBacteria:EBBACT00000011822 EnsemblBacteria:EBBACT00000013991
EnsemblBacteria:EBBACT00000024065 GeneID:1085015 GeneID:2818155
GeneID:2853126 KEGG:ban:BA_0100 KEGG:bar:GBAA_0100 KEGG:bat:BAS0100
OMA:EAVKNMT BioCyc:BANT260799:GJAJ-111-MONOMER
BioCyc:BANT261594:GJ7F-113-MONOMER Uniprot:Q81VU0
Length = 119
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KTEFDV + + +I VIK VR +T L LKEAK+L++ PK KE +K++AE K +
Sbjct: 50 KTEFDVELTSAGAQ-KIKVIKVVREITGLGLKEAKELVDNTPKVIKEAAAKEEAEEIKAK 108
Query: 141 LEEAGA 146
LEE GA
Sbjct: 109 LEEVGA 114
>TIGR_CMR|CPS_4770 [details] [associations]
symbol:CPS_4770 "ribosomal protein L7/L12" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 RefSeq:YP_271414.1 ProteinModelPortal:Q47UV8
SMR:Q47UV8 STRING:Q47UV8 PRIDE:Q47UV8 GeneID:3520350
KEGG:cps:CPS_4770 PATRIC:21472357 OMA:TMDLTEI
BioCyc:CPSY167879:GI48-4776-MONOMER Uniprot:Q47UV8
Length = 119
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 38/66 (57%), Positives = 45/66 (68%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
+TEF+VV+ ++AVIKAVR T L LKEAKDL+E L KEGV K +AE KK
Sbjct: 51 QTEFNVVMTSF-GEKKVAVIKAVRGATGLGLKEAKDLVESLGV-VKEGVEKAEAEELKKT 108
Query: 141 LEEAGA 146
LEEAGA
Sbjct: 109 LEEAGA 114
>TIGR_CMR|ECH_0953 [details] [associations]
symbol:ECH_0953 "ribosomal protein L7/L12" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 RefSeq:YP_507741.1
ProteinModelPortal:Q2GFP2 STRING:Q2GFP2 GeneID:3927893
KEGG:ech:ECH_0953 PATRIC:20577288 OMA:IESFKEM
BioCyc:ECHA205920:GJNR-956-MONOMER Uniprot:Q2GFP2
Length = 133
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 44/128 (34%), Positives = 64/128 (50%)
Query: 23 IEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKT 82
I+ L +I SL L + LV+ ++ KL KT
Sbjct: 6 IDSLVEQICSLDLCKAAELVEKMEQKLGFPKGGLLTAVPAAGGNQVEGGAAAEE----KT 61
Query: 83 EFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGL-PKKFKEG--VSKDDAEAAKK 139
+F VV + ++ +I+VIKAVR T+L LKEAK+ +E K+ EG K++AE KK
Sbjct: 62 DFSVVFESYAADKKISVIKAVRECTSLGLKEAKEFVEKEGAKELIEGKKYKKEEAEEIKK 121
Query: 140 QLEEAGAK 147
+LE+AGAK
Sbjct: 122 KLEDAGAK 129
>UNIPROTKB|P0A5V2 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:MADLKDF
PIR:A70615 RefSeq:NP_215166.1 RefSeq:NP_335092.1
RefSeq:YP_006513993.1 ProteinModelPortal:P0A5V2 SMR:P0A5V2
PRIDE:P0A5V2 EnsemblBacteria:EBMYCT00000002119
EnsemblBacteria:EBMYCT00000072683 GeneID:13318538 GeneID:888078
GeneID:925964 KEGG:mtc:MT0681 KEGG:mtu:Rv0652 KEGG:mtv:RVBD_0652
PATRIC:18123219 TubercuList:Rv0652 Uniprot:P0A5V2
Length = 130
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTN-LALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
++EFDV++ E + +I VIK VR + + L LKEAKDL++G PK E V+K+ A+ AK
Sbjct: 60 QSEFDVIL-EAAGDKKIGVIKVVREIVSGLGLKEAKDLVDGAPKPLLEKVAKEAADEAKA 118
Query: 140 QLEEAGA 146
+LE AGA
Sbjct: 119 KLEAAGA 125
>TIGR_CMR|APH_1025 [details] [associations]
symbol:APH_1025 "ribosomal protein L7/L12" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935 OMA:TIDEMMS
TIGRFAMs:TIGR00855 RefSeq:YP_505584.1 ProteinModelPortal:Q2GJ67
STRING:Q2GJ67 GeneID:3930610 KEGG:aph:APH_1025 PATRIC:20950800
eggNOG:NOG115730 ProtClustDB:PRK00157
BioCyc:APHA212042:GHPM-1032-MONOMER Uniprot:Q2GJ67
Length = 134
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 43/128 (33%), Positives = 63/128 (49%)
Query: 23 IEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKT 82
++ L +I +L L LV+ +++KL KT
Sbjct: 6 LDDLVEKICALDLCSAAALVEKIEEKLGFPKGGLMASVSAAGSASQGAGGAAEAE---KT 62
Query: 83 EFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGL-PKKFKEG--VSKDDAEAAKK 139
EF V+ D ++ +IAVIKAVR T+L LKEAKD +E ++ EG K +AE KK
Sbjct: 63 EFIVMFDGYAADKKIAVIKAVRECTSLGLKEAKDFVEQEGSRELIEGKKYKKAEAEEVKK 122
Query: 140 QLEEAGAK 147
+LE+AGA+
Sbjct: 123 KLEDAGAQ 130
>POMBASE|SPCC4B3.09c [details] [associations]
symbol:SPCC4B3.09c "mitochondrial ribosomal protein
subunit L12 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISM] [GO:0006412
"translation" evidence=ISM] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
PomBase:SPCC4B3.09c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 PIR:T50439 RefSeq:NP_588081.2
HSSP:P0A7K2 STRING:Q9USJ9 PRIDE:Q9USJ9 EnsemblFungi:SPCC4B3.09c.1
GeneID:2539530 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 NextBio:20800691 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 Uniprot:Q9USJ9
Length = 173
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/127 (29%), Positives = 61/127 (48%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXX 80
+I ++ +ISSL+L E LV L++KL
Sbjct: 43 QIGEMVDKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVASAAPSEEKAPEEKKEE 102
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KT +++ ++ + ++ VIK V++L L+L +AK +E PK KE + K+DAEA K +
Sbjct: 103 KTTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEAIKSK 162
Query: 141 LEEAGAK 147
LE+ K
Sbjct: 163 LEKLSCK 169
>CGD|CAL0006345 [details] [associations]
symbol:orf19.2275 species:5476 "Candida albicans" [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0009060 "aerobic
respiration" evidence=IEA] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 CGD:CAL0006345
HAMAP:MF_00368 EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
TIGRFAMs:TIGR00855 RefSeq:XP_714802.1 RefSeq:XP_714864.1
ProteinModelPortal:Q59Z25 STRING:Q59Z25 GeneID:3643513
GeneID:3643593 KEGG:cal:CaO19.2275 KEGG:cal:CaO19.9815
Uniprot:Q59Z25
Length = 174
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXX 79
KI + +IS+LTL E L++ L+++L
Sbjct: 43 KITTIVDQISTLTLLETSQLINELKERLNISDISLPVGGAQAAPVAQAAPAEEEVKEEVE 102
Query: 80 XKTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
KT F + ++ + ++ +IK V+ + L+L E+K +E PK KE V+K+DAE K
Sbjct: 103 EKTIFSIKLESFDAKSKPKIIKEVKGMLGLSLVESKKFVESAPKVLKENVAKEDAEKIKA 162
Query: 140 QLEEAGAK 147
LE GAK
Sbjct: 163 TLEGLGAK 170
>UNIPROTKB|E2QVI3 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 CTD:6182 RefSeq:XP_850016.1
Ensembl:ENSCAFT00000009364 GeneID:608030 KEGG:cfa:608030
NextBio:20893711 Uniprot:E2QVI3
Length = 198
Score = 97 (39.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLEEAG 145
LE G
Sbjct: 187 ALEAVG 192
Score = 63 (27.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>UNIPROTKB|P52815 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0045893
GO:GO:0006412 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
HOGENOM:HOG000248814 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GO:GO:0006390 CTD:6182 eggNOG:NOG312691
HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:X79865 EMBL:AF059736
EMBL:BC002344 EMBL:BC007497 EMBL:AF105278 IPI:IPI01015060
RefSeq:NP_002940.2 UniGene:Hs.109059 ProteinModelPortal:P52815
SMR:P52815 DIP:DIP-50865N IntAct:P52815 MINT:MINT-1150069
STRING:P52815 PhosphoSite:P52815 DMDM:20981709
DOSAC-COBS-2DPAGE:P52815 SWISS-2DPAGE:P52815 PaxDb:P52815
PeptideAtlas:P52815 PRIDE:P52815 Ensembl:ENST00000333676
GeneID:6182 KEGG:hsa:6182 UCSC:uc002kbh.2 GeneCards:GC17P079670
HGNC:HGNC:10378 HPA:HPA022853 HPA:HPA023043 MIM:602375
neXtProt:NX_P52815 PharmGKB:PA30941 InParanoid:P52815
PhylomeDB:P52815 GenomeRNAi:6182 NextBio:24005 ArrayExpress:P52815
Bgee:P52815 CleanEx:HS_MRPL12 Genevestigator:P52815
GermOnline:ENSG00000183093 Uniprot:P52815
Length = 198
Score = 97 (39.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLEEAG 145
LE G
Sbjct: 187 ALEAVG 192
Score = 63 (27.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>UNIPROTKB|Q7YR75 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9913 "Bos taurus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 PDB:2FTC PDBsum:2FTC
EMBL:AB116379 EMBL:BT020735 EMBL:BT020755 EMBL:BT020982
EMBL:BT030597 EMBL:BC134767 IPI:IPI00691477 RefSeq:NP_963900.1
UniGene:Bt.8177 ProteinModelPortal:Q7YR75 STRING:Q7YR75
PRIDE:Q7YR75 GeneID:399560 KEGG:bta:399560 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044
EvolutionaryTrace:Q7YR75 NextBio:20816606 Uniprot:Q7YR75
Length = 198
Score = 96 (38.9 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLEEAG 145
LE G
Sbjct: 187 ALEAVG 192
Score = 63 (27.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>MGI|MGI:1926273 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006390 "transcription from mitochondrial
promoter" evidence=ISO] [GO:0006412 "translation" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 MGI:MGI:1926273 GO:GO:0045893 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:AL669855 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
GeneTree:ENSGT00390000000190 GO:GO:0006390 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:AK005328
EMBL:AK028168 EMBL:AK134816 EMBL:AK166969 EMBL:AK168337
EMBL:BC005712 EMBL:BC019565 IPI:IPI00118963 RefSeq:NP_081480.2
UniGene:Mm.133851 ProteinModelPortal:Q9DB15 SMR:Q9DB15
IntAct:Q9DB15 STRING:Q9DB15 PhosphoSite:Q9DB15 PaxDb:Q9DB15
PRIDE:Q9DB15 Ensembl:ENSMUST00000043627 GeneID:56282 KEGG:mmu:56282
UCSC:uc007mta.1 InParanoid:B1ATZ3 OMA:MYCTRYC ChiTaRS:MRPL12
NextBio:312184 Bgee:Q9DB15 CleanEx:MM_MRPL12 Genevestigator:Q9DB15
GermOnline:ENSMUSG00000039640 Uniprot:Q9DB15
Length = 201
Score = 96 (38.9 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 130 RTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 189
Query: 140 QLEEAG 145
LE G
Sbjct: 190 ALEAVG 195
Score = 63 (27.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 60 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 91
>UNIPROTKB|P52827 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:10034 "Cricetus cricetus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 HOVERGEN:HBG001832
EMBL:X79864 ProteinModelPortal:P52827 PRIDE:P52827 Uniprot:P52827
Length = 203
Score = 96 (38.9 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 132 RTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 191
Query: 140 QLEEAG 145
LE G
Sbjct: 192 ALEAVG 197
Score = 63 (27.2 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 61 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 92
>DICTYBASE|DDB_G0274407 [details] [associations]
symbol:DDB_G0274407 "39S ribosomal protein L12,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 dictyBase:DDB_G0274407
GO:GO:0006412 EMBL:AAFI02000012 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
SUPFAM:SSF48300 OMA:GVAKPPN eggNOG:NOG312691 RefSeq:XP_644221.1
ProteinModelPortal:Q86KA1 STRING:Q86KA1 EnsemblProtists:DDB0167610
GeneID:8619650 KEGG:ddi:DDB_G0274407 InParanoid:Q86KA1
ProtClustDB:CLSZ2431041 Uniprot:Q86KA1
Length = 182
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 81
++ L IS L++ +V +L +LQ KL K
Sbjct: 52 EVADLVERISKLSILDVMDLTQHLQKKLSIPDIDLSSLGSGAPAGGAAPAAAAAPAAVAK 111
Query: 82 TEFDVVIDEVPSNARIAVIKAVRTLT-NLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
T+F V + +VP A+ +IK +R + +L+L E K L+E +P + VSK++AE +
Sbjct: 112 TDFQVRLVKVPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSKEEAEKIIAK 171
Query: 141 LEEAGAK 147
L+ +GA+
Sbjct: 172 LKASGAE 178
>TAIR|locus:2080369 [details] [associations]
symbol:AT3G06040 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
GO:GO:0003735 GO:GO:0008233 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AC068073 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015608 PANTHER:PTHR11809:SF6 HSSP:P02392 EMBL:AY063991
EMBL:AY096690 IPI:IPI00546526 RefSeq:NP_001078113.1
RefSeq:NP_187255.1 RefSeq:NP_974234.1 UniGene:At.27114
ProteinModelPortal:Q9M7T1 SMR:Q9M7T1 STRING:Q9M7T1 PaxDb:Q9M7T1
PRIDE:Q9M7T1 EnsemblPlants:AT3G06040.1 EnsemblPlants:AT3G06040.2
EnsemblPlants:AT3G06040.3 GeneID:819777 KEGG:ath:AT3G06040
TAIR:At3g06040 InParanoid:Q9M7T1 OMA:KPKKYKY PhylomeDB:Q9M7T1
ProtClustDB:CLSN2684635 ArrayExpress:Q9M7T1 Genevestigator:Q9M7T1
Uniprot:Q9M7T1
Length = 186
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KT FDV +++ ++ +I VIK VRT T+L LKEAK+L+E +P K+GV+K++A +
Sbjct: 116 KTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIAK 175
Query: 141 LEEAG 145
++ G
Sbjct: 176 IKAVG 180
>GENEDB_PFALCIPARUM|PFE1225w [details] [associations]
symbol:PFE1225w "50S ribosomal subunit protein
L12, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 121 (47.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 24/63 (38%), Positives = 43/63 (68%)
Query: 84 FDVVIDEVPSNARIAVIKAVRTLT-NLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLE 142
+D++++ + N +I +IK V+ + +L LK+AKDL++ LP+ E V+K+ A+ K +L
Sbjct: 189 YDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETADKWKTKLT 248
Query: 143 EAG 145
EAG
Sbjct: 249 EAG 251
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQ 46
K++++ + +LTL E LV ++
Sbjct: 125 KVDEIIESLKNLTLLEASELVKKIE 149
>UNIPROTKB|Q8I3L9 [details] [associations]
symbol:PFE1225w "Organelle ribosomal protein L7/L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 121 (47.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 24/63 (38%), Positives = 43/63 (68%)
Query: 84 FDVVIDEVPSNARIAVIKAVRTLT-NLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQLE 142
+D++++ + N +I +IK V+ + +L LK+AKDL++ LP+ E V+K+ A+ K +L
Sbjct: 189 YDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETADKWKTKLT 248
Query: 143 EAG 145
EAG
Sbjct: 249 EAG 251
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQ 46
K++++ + +LTL E LV ++
Sbjct: 125 KVDEIIESLKNLTLLEASELVKKIE 149
>UNIPROTKB|A5PJ86 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
IPI:IPI00691477 UniGene:Bt.8177 HOVERGEN:HBG001832
EMBL:DAAA02049420 EMBL:BC142005 STRING:A5PJ86
Ensembl:ENSBTAT00000053193 InParanoid:A5PJ86 Uniprot:A5PJ86
Length = 226
Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLEEAG 145
LE G
Sbjct: 187 ALEAVG 192
Score = 63 (27.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>RGD|1588559 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA;ISO] [GO:0006390 "transcription from mitochondrial
promoter" evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 RGD:1588559 GO:GO:0045893
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
GO:GO:0006390 CTD:6182 OrthoDB:EOG4R5044 IPI:IPI00203773
RefSeq:NP_001025071.1 Ensembl:ENSRNOT00000054965 GeneID:303746
KEGG:rno:303746 OMA:DNTPKEY Uniprot:D3ZXF9
Length = 276
Score = 95 (38.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 205 QTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 264
Query: 140 QLEEAG 145
LE G
Sbjct: 265 ALEAVG 270
Score = 63 (27.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 135 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 166
>UNIPROTKB|E1C3B6 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0006390
"transcription from mitochondrial promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0045893 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 GO:GO:0006390
OMA:MYCTRYC EMBL:AADN02053585 IPI:IPI00583893
Ensembl:ENSGALT00000011655 NextBio:20919270 Uniprot:E1C3B6
Length = 194
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 16 AVEAPEKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXX 75
A E K+ +L +I+ LTL EV +L L++ L
Sbjct: 55 AKEYSPKVRQLVRDIAGLTLLEVADLNALLKETLKIPDVGVMPAGAAAHLPAQAAPQEEE 114
Query: 76 XXX---XXKTEFDVVIDEVPSNARIAVIKAVRTLT-NLALKEAKDLIEGLPKKFKEGVSK 131
KT F V + E+ + ++ +IK V+ + L +AK L+E LP++ K VSK
Sbjct: 115 EAVPMKKEKTHFSVRLTELKATDKVKLIKEVKNFVPGINLVQAKKLVESLPQEIKANVSK 174
Query: 132 DDAEAAKKQLEEAG 145
++AE K LE AG
Sbjct: 175 EEAEKIKTALEAAG 188
>UNIPROTKB|F6XRN5 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300
Ensembl:ENSCAFT00000009364 EMBL:AAEX03006169 OMA:GGCATIL
Uniprot:F6XRN5
Length = 442
Score = 92 (37.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLE 142
LE
Sbjct: 187 ALE 189
Score = 63 (27.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>UNIPROTKB|B4DLN1 [details] [associations]
symbol:SLC25A10 "Uncharacterized protein" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006839 "mitochondrial transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR002030
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 PRINTS:PR00784
ProDom:PD001326 Pfam:PF00153 GO:GO:0016021 GO:GO:0005739
GO:GO:0005634 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 HGNC:HGNC:10980
ChiTaRS:SLC25A10 SUPFAM:SSF48300 EMBL:AC139530 EMBL:AK297076
IPI:IPI00005537 SMR:B4DLN1 STRING:B4DLN1 Ensembl:ENST00000541223
Ensembl:ENST00000571730 UCSC:uc010wut.2 Uniprot:B4DLN1
Length = 442
Score = 92 (37.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLE 142
LE
Sbjct: 187 ALE 189
Score = 63 (27.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>UNIPROTKB|H9KUU7 [details] [associations]
symbol:LOC100848134 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0015291 "secondary active transmembrane
transporter activity" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0005743 GO:GO:0006412 GO:GO:0005840
GO:GO:0015291 GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300 EMBL:DAAA02049420
Ensembl:ENSBTAT00000000534 Uniprot:H9KUU7
Length = 442
Score = 91 (37.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKK 139
+T F V + E ++ +IK ++ + + L +AK L+E LP++ K V+K +AE K
Sbjct: 127 RTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKA 186
Query: 140 QLE 142
LE
Sbjct: 187 ALE 189
Score = 63 (27.2 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKL 49
E P KI++L +I+SLTL E+ +L + L+ L
Sbjct: 59 EYPPKIQQLVQDIASLTLLEISDLNELLKKTL 90
>ASPGD|ASPL0000042202 [details] [associations]
symbol:AN2057 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0005739
GO:GO:0006412 EMBL:BN001307 GO:GO:0005840 EMBL:AACD01000032
GO:GO:0003735 GO:GO:0009060 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 RefSeq:XP_659661.1 ProteinModelPortal:Q5BBM3
STRING:Q5BBM3 EnsemblFungi:CADANIAT00008726 GeneID:2875113
KEGG:ani:AN2057.2 OMA:RRLPADY Uniprot:Q5BBM3
Length = 184
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KT F++ ++ V + + VIK V+TL L+L ++K +E +PK KE V K++AE +
Sbjct: 114 KTLFNLKLESVDAAQKAKVIKEVKTLLGLSLVDSKKFVESVPKVLKESVPKEEAEKLIET 173
Query: 141 LEEAGAK 147
L+ GAK
Sbjct: 174 LKAVGAK 180
>FB|FBgn0011787 [details] [associations]
symbol:mRpL12 "mitochondrial ribosomal protein L12"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0016049 "cell growth" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IGI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 EMBL:AE014296 GO:GO:0005811 GO:GO:0006412
GO:GO:0016049 GO:GO:0003682 GO:GO:0005762 GO:GO:0003735
GO:GO:0007005 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 OMA:QKSVMEI CTD:6182
FlyBase:FBgn0011787 EMBL:AY060871 EMBL:AY075505
RefSeq:NP_001246688.1 RefSeq:NP_524742.1 UniGene:Dm.1433 SMR:Q9VSR5
IntAct:Q9VSR5 MINT:MINT-1720242 STRING:Q9VSR5
EnsemblMetazoa:FBtr0076511 GeneID:44326 KEGG:dme:Dmel_CG5012
UCSC:CG5012-RA InParanoid:Q9VSR5 GenomeRNAi:44326 NextBio:837172
Uniprot:Q9VSR5
Length = 182
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 36/137 (26%), Positives = 58/137 (42%)
Query: 13 PLCAVEAPE-KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXX 71
P A + P K++ + I++L L EV L L+ KL
Sbjct: 41 PEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPARAAPAE 100
Query: 72 XXXXXX-XXXKTEFDVVIDEVPSNARIAVIKAVRTLTN-LALKEAKDLIEGLPKKFKEGV 129
+T F V + + ++A+IK V+ L + L +AK +E P KE +
Sbjct: 101 DEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDI 160
Query: 130 SKDDAEAAKKQLEEAGA 146
K++AE K+ L +AGA
Sbjct: 161 PKEEAEKLKEALSKAGA 177
>TAIR|locus:2056921 [details] [associations]
symbol:AT2G03130 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC005313 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HSSP:P29396 EMBL:DQ056524 IPI:IPI00534647
PIR:T02713 RefSeq:NP_178412.1 UniGene:At.52613
ProteinModelPortal:O81061 SMR:O81061 STRING:O81061
EnsemblPlants:AT2G03130.1 GeneID:814842 KEGG:ath:AT2G03130
TAIR:At2g03130 eggNOG:NOG238575 HOGENOM:HOG000115154
InParanoid:O81061 OMA:IMEDAKE PhylomeDB:O81061
ProtClustDB:CLSN2913253 ArrayExpress:O81061 Genevestigator:O81061
Uniprot:O81061
Length = 110
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 81 KTEFDVVIDEVPSNARIAVIKAVRTLTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
KT F+V ++ + A+I +IK VR + + LKEA L+ P K G+SK++ E ++
Sbjct: 21 KTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLKTGLSKEEGEEVVEK 80
Query: 141 LEEAGAK 147
L GA+
Sbjct: 81 LNALGAE 87
>ZFIN|ZDB-GENE-050417-187 [details] [associations]
symbol:mrpl12 "mitochondrial ribosomal protein L12"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
Pfam:PF00153 ZFIN:ZDB-GENE-050417-187 GO:GO:0016021 GO:GO:0006412
GO:GO:0006810 GO:GO:0005840 GO:GO:0003735 Gene3D:1.50.40.10
InterPro:IPR018108 InterPro:IPR023395 SUPFAM:SSF103506
PROSITE:PS50920 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 EMBL:CU570772
IPI:IPI00995732 Ensembl:ENSDART00000109544 ArrayExpress:F1QDE0
Bgee:F1QDE0 Uniprot:F1QDE0
Length = 412
Score = 115 (45.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 18 EAPEKIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXX---XXXXXX 74
E KI++L +I+SLTL EV +L + L+ L
Sbjct: 27 EYSPKIQQLVNDIASLTLIEVSDLNELLKKTLNIQDVGMMSMGSMAAVPVAPPAEAEEEV 86
Query: 75 XXXXXXKTEFDVVIDEVPSNARIAVIKAVRTLT---NLALK-EAKDLIEGLPKKFKEGVS 130
KT F + + E + ++ +IK V+ NL + +AK L+E LP++ + +S
Sbjct: 87 APAKKEKTHFTIKLTEFKAADKVKLIKEVKNCMEGINLVQQLQAKKLVESLPQEIRTNIS 146
Query: 131 KDDAEAAKKQLE 142
KD+AE K LE
Sbjct: 147 KDEAEKLKSALE 158
>WB|WBGene00012361 [details] [associations]
symbol:mrpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 81
K+ L EI++L+L +V +L L+ +L K
Sbjct: 45 KVSSLVEEIANLSLLDVSDLNWALKKRLNIPDQPLMAAAAAAPAAQAEAEAASDVPQ--K 102
Query: 82 TEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
F V + + +IA+IK +R + L L +AK +E P KE + K +A+ K
Sbjct: 103 MTFTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAPVNVKEDLGKAEADELKAI 162
Query: 141 LEEAGA 146
LE+AGA
Sbjct: 163 LEKAGA 168
>UNIPROTKB|O18180 [details] [associations]
symbol:mrpl-12 "Protein MRPL-12" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 22 KIEKLATEISSLTLQEVCNLVDYLQDKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 81
K+ L EI++L+L +V +L L+ +L K
Sbjct: 45 KVSSLVEEIANLSLLDVSDLNWALKKRLNIPDQPLMAAAAAAPAAQAEAEAASDVPQ--K 102
Query: 82 TEFDVVIDEVPSNARIAVIKAVRT-LTNLALKEAKDLIEGLPKKFKEGVSKDDAEAAKKQ 140
F V + + +IA+IK +R + L L +AK +E P KE + K +A+ K
Sbjct: 103 MTFTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAPVNVKEDLGKAEADELKAI 162
Query: 141 LEEAGA 146
LE+AGA
Sbjct: 163 LEKAGA 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.343 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 148 117 0.00091 102 3 11 23 0.39 31
29 0.46 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 468 (50 KB)
Total size of DFA: 91 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.29u 0.20s 11.49t Elapsed: 00:00:00
Total cpu time: 11.29u 0.20s 11.49t Elapsed: 00:00:00
Start: Sat May 11 14:36:29 2013 End: Sat May 11 14:36:29 2013