Query 045363
Match_columns 712
No_of_seqs 390 out of 2798
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 22:15:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 5E-119 2E-123 1032.4 50.1 611 76-707 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 3E-113 1E-117 987.5 53.3 616 76-707 1-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 6.9E-81 2.4E-85 746.4 46.2 526 82-708 3-607 (926)
4 3afg_A Subtilisin-like serine 100.0 1.3E-59 4.4E-64 531.3 41.5 340 31-559 59-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.2E-56 4E-61 491.3 23.1 320 31-558 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 5.9E-56 2E-60 497.9 25.0 334 29-558 63-465 (471)
7 1y9z_A Alkaline serine proteas 100.0 2.6E-54 8.8E-59 479.5 25.5 382 78-579 4-437 (441)
8 1r6v_A Subtilisin-like serine 100.0 5.2E-53 1.8E-57 482.7 26.0 349 31-569 52-450 (671)
9 1dbi_A AK.1 serine protease; h 100.0 2.9E-52 9.9E-57 435.1 26.5 269 77-557 10-279 (280)
10 1gci_A Subtilisin; hydrolase, 100.0 2.8E-52 9.4E-57 432.5 25.0 265 78-557 4-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 2.3E-52 7.8E-57 434.8 24.0 266 78-557 4-274 (274)
12 1to2_E Subtilisin BPN'; serine 100.0 8E-52 2.7E-56 432.0 24.4 268 78-558 4-276 (281)
13 1thm_A Thermitase; hydrolase(s 100.0 1.7E-51 5.7E-56 429.4 25.2 267 78-557 11-278 (279)
14 2p4e_P Proprotein convertase s 100.0 6.5E-54 2.2E-58 486.8 5.7 322 12-535 90-423 (692)
15 2x8j_A Intracellular subtilisi 100.0 1E-51 3.5E-56 440.3 21.0 275 76-557 19-310 (327)
16 4h6x_A Thiazoline oxidase/subt 100.0 3.3E-53 1.1E-57 457.6 7.2 305 82-557 17-337 (357)
17 2ixt_A 36KDA protease; serine 100.0 3E-50 1E-54 427.1 26.2 289 76-552 4-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 9.3E-51 3.2E-55 425.1 17.3 264 94-557 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 1.6E-50 5.4E-55 430.6 18.5 275 77-558 7-317 (320)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 1.1E-50 3.7E-55 437.2 17.2 281 77-558 22-329 (347)
21 3lpc_A APRB2; protease, subtil 100.0 8.8E-50 3E-54 429.2 21.5 307 78-558 9-337 (340)
22 4h6w_A N-terminal cyanobactin 100.0 3.1E-50 1.1E-54 426.4 17.5 274 82-557 7-287 (306)
23 1wmd_A Protease; alpha-beta hy 100.0 5E-49 1.7E-53 436.6 22.2 296 81-559 6-319 (434)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 1.7E-48 5.8E-53 462.8 27.6 357 167-708 267-654 (1354)
25 1sh7_A Extracellular subtilisi 100.0 1.3E-47 4.4E-52 400.3 24.2 236 88-536 19-258 (284)
26 2oxa_A Extracellular serine pr 100.0 2.3E-47 7.9E-52 439.2 21.1 291 85-563 57-430 (600)
27 2b6n_A Proteinase K; S binding 100.0 8.7E-47 3E-51 393.5 23.2 238 88-536 21-262 (278)
28 2pwa_A Proteinase K; structure 100.0 4E-47 1.4E-51 395.6 20.3 253 77-553 5-272 (279)
29 4dzt_A Aqualysin-1, aqualysin- 100.0 1.2E-46 4.1E-51 392.5 23.2 236 88-536 21-260 (276)
30 1p8j_A Furin precursor; prohor 100.0 1.8E-46 6.3E-51 419.6 20.5 292 78-560 13-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 1.4E-45 4.9E-50 415.1 26.4 278 84-560 40-344 (503)
32 3f7m_A Alkaline serine proteas 100.0 1E-45 3.5E-50 386.1 18.7 242 77-536 6-262 (279)
33 2qtw_B Proprotein convertase s 100.0 4.1E-45 1.4E-49 404.6 19.3 246 90-535 18-271 (546)
34 3hjr_A Extracellular serine pr 100.0 4.8E-43 1.6E-47 404.7 29.2 309 85-559 57-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2.2E-24 7.5E-29 243.2 10.2 97 198-298 274-384 (552)
36 1ga6_A Serine-carboxyl protein 99.9 1.2E-21 4.1E-26 210.6 11.9 100 199-298 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 1.6E-09 5.6E-14 121.2 9.8 98 199-297 262-374 (544)
38 2w2n_P Proprotein convertase s 98.6 3.8E-08 1.3E-12 87.0 5.7 64 10-74 50-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.1 3.1E-06 1.1E-10 69.7 6.2 47 31-78 33-79 (80)
40 2qtw_A Proprotein convertase s 98.0 6.6E-06 2.3E-10 73.5 6.1 62 12-74 62-123 (124)
41 3icu_A E3 ubiquitin-protein li 97.9 6.9E-05 2.4E-09 71.9 11.1 86 346-432 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 97.8 4.5E-05 1.5E-09 61.9 6.9 56 12-74 17-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.8 0.0016 5.5E-08 50.9 5.2 46 28-74 19-64 (65)
44 2ys4_A Hydrocephalus-inducing 94.9 0.072 2.5E-06 47.0 7.9 73 623-703 42-115 (122)
45 2ek8_A Aminopeptidase; metallo 92.8 0.29 9.9E-06 53.0 9.3 64 355-419 108-182 (421)
46 3iib_A Peptidase M28; YP_92679 92.6 0.33 1.1E-05 52.9 9.5 74 357-431 124-226 (444)
47 1y9z_A Alkaline serine proteas 90.7 0.17 5.7E-06 55.3 4.5 31 437-475 181-211 (441)
48 3lxu_X Tripeptidyl-peptidase 2 88.9 0.29 9.8E-06 59.6 4.9 26 93-118 31-56 (1354)
49 2e6j_A Hydin protein; PAPD, st 87.7 1.9 6.6E-05 36.7 8.3 94 607-705 12-108 (112)
50 2r39_A FIXG-related protein; s 87.3 3.3 0.00011 35.9 9.6 58 620-679 29-86 (118)
51 3qbt_B Inositol polyphosphate 86.8 7.2 0.00025 34.9 11.8 84 623-707 44-138 (140)
52 3kas_A Transferrin receptor pr 82.7 1.2 4.1E-05 50.6 5.6 61 358-419 128-230 (640)
53 2qsv_A Uncharacterized protein 81.3 8 0.00028 37.4 10.4 79 623-705 20-104 (220)
54 3fed_A Glutamate carboxypeptid 77.8 2.1 7.3E-05 49.1 5.6 63 357-420 150-268 (707)
55 3idu_A Uncharacterized protein 71.6 18 0.0006 31.8 8.7 51 623-677 34-85 (127)
56 2x41_A Beta-glucosidase; hydro 68.6 8.5 0.00029 44.4 7.7 71 607-678 598-678 (721)
57 2qsv_A Uncharacterized protein 68.2 54 0.0018 31.4 12.4 89 610-704 124-218 (220)
58 3qis_A Inositol polyphosphate 67.6 17 0.00057 38.2 9.1 84 623-707 47-141 (366)
59 3zyz_A Beta-D-glucoside glucoh 67.3 17 0.00059 41.7 9.8 54 623-678 614-675 (713)
60 3abz_A Beta-glucosidase I; gly 62.9 24 0.00084 41.3 10.2 162 490-678 618-799 (845)
61 1m1s_A WR4; structural genomic 61.4 22 0.00076 30.6 7.1 57 625-684 26-82 (116)
62 1wic_A Hypothetical protein ri 58.1 25 0.00086 31.8 7.3 52 623-677 36-87 (152)
63 3isy_A Bsupi, intracellular pr 57.7 58 0.002 28.1 9.1 67 623-690 19-102 (120)
64 1row_A SSP-19, MSP-domain prot 57.3 26 0.00089 29.8 6.8 51 625-678 18-68 (109)
65 1z9l_A Vesicle-associated memb 56.6 34 0.0012 29.7 7.8 52 623-677 28-79 (128)
66 2cri_A Vesicle-associated memb 55.1 33 0.0011 30.8 7.5 52 623-677 32-83 (147)
67 1w8o_A Bacterial sialidase; 3D 54.5 71 0.0024 35.5 12.0 79 608-693 363-442 (601)
68 1msp_A MSP, major sperm protei 51.2 36 0.0012 29.6 6.9 52 623-677 26-77 (126)
69 2kq1_A BH0266 protein; solutio 38.2 7.3 0.00025 33.8 0.2 54 623-678 54-111 (119)
70 2l0d_A Cell surface protein; s 33.2 1.5E+02 0.0052 25.2 7.8 23 623-645 20-43 (114)
71 3q48_A Chaperone CUPB2; IG fol 32.0 3.4E+02 0.012 26.5 11.3 83 623-708 43-148 (257)
72 1wgl_A TOLL-interacting protei 30.4 22 0.00077 26.5 1.8 29 505-533 10-38 (59)
73 1ni7_A ER75, hypothetical prot 26.7 46 0.0016 30.1 3.6 32 493-525 78-109 (155)
74 3rfr_A PMOB; membrane, oxidore 26.7 4.2E+02 0.014 27.6 10.9 65 623-693 299-395 (419)
75 3ndz_E Endoglucanase D; cellot 26.4 2.8E+02 0.0097 23.1 8.8 30 623-652 16-46 (107)
76 3sd2_A Putative member of DUF3 24.2 3.1E+02 0.01 22.8 8.3 66 611-691 35-100 (101)
77 3e9t_A Na/Ca exchange protein; 23.9 1.1E+02 0.0039 25.8 5.4 31 647-678 47-78 (114)
78 4ay0_A Chaperone protein CAF1M 23.8 3.5E+02 0.012 25.7 9.5 60 623-683 27-91 (218)
79 3g0m_A Cysteine desulfuration 22.5 45 0.0015 29.7 2.6 33 492-525 70-102 (141)
80 4ep8_B Urease subunit beta; al 22.0 1.6E+02 0.0054 24.4 5.4 16 623-638 19-34 (101)
81 3hrz_B Cobra venom factor; ser 22.0 3.1E+02 0.011 26.6 9.0 65 607-677 86-155 (252)
82 2hr0_B Complement C3 alpha' ch 20.6 2.1E+02 0.0071 33.8 8.6 65 607-677 85-155 (915)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=5.1e-119 Score=1032.39 Aligned_cols=611 Identities=37% Similarity=0.609 Sum_probs=546.3
Q ss_pred cCCCccccccch-hhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCcccc--CCceeEEeEecc
Q 045363 76 TTRTWDFLGMSE-KLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTR--CNKKVIGARYYN 152 (712)
Q Consensus 76 ~~~s~~~~~~~~-~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~--~n~ki~g~~~~~ 152 (712)
|+++|+|+|++. ..+|..+.+|+||+|||||||||++||+|.+.+++++|.+|+|.|+.+.+|+. ||+|+++.++|
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f- 79 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYF- 79 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEEC-
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEec-
Confidence 578999999963 56999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred CCCCC----CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHH
Q 045363 153 LDNAL----DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFD 228 (712)
Q Consensus 153 ~~~~~----~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~ 228 (712)
.++++ ....+...++|..||||||||||||+.+++.+++|++.|.+.||||+|+|+++|+++..++..+++++||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~ 159 (649)
T 3i6s_A 80 NKGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMD 159 (649)
T ss_dssp CHHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHH
T ss_pred cCcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHH
Confidence 64432 11234467889999999999999999998888889999999999999999999999988899999999999
Q ss_pred HHHhCCCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeC
Q 045363 229 DAIGDGVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLG 308 (712)
Q Consensus 229 ~a~~~g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~ 308 (712)
||+++|+||||||||....++..+++..++++|+++|++||+||||+|+...++++.+||+|+|||++.+|.|+..+.++
T Consensus 160 ~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lg 239 (649)
T 3i6s_A 160 QAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLG 239 (649)
T ss_dssp HHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEET
T ss_pred HHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeC
Confidence 99999999999999998667788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcc--cceEEEEecCCc-----hhHHhhccC
Q 045363 309 NGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKV--KGKIVYCLGSGS-----QDYTIDRLQ 381 (712)
Q Consensus 309 ~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~~~~-----~~~~~~~~G 381 (712)
+++++.|.+++........+|+++.. ....|.+..++..++ +||||+|.++.+ .. +++.+|
T Consensus 240 ng~~~~g~sl~~~~~~~~~~plv~~~-----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~-~~~~~G 307 (649)
T 3i6s_A 240 NGLKIRGWSLFPARAFVRDSPVIYNK-----------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRI-ITRARL 307 (649)
T ss_dssp TSCEEEEECCCSSCBCEEEEEEECCT-----------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHH-HHHHTC
T ss_pred CCcEEeeeecccCcccCcceeeEecc-----------cccccccccccccccccCCcEEEEeCCCccHHHHHH-HHHhcC
Confidence 99999999998876667789999875 246799988888877 999999999987 55 889999
Q ss_pred ceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeC-CCCCccccccCCCCCcCCCCcccC
Q 045363 382 GAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNT-STAPFIASFSSRGPQKITLNILKP 460 (712)
Q Consensus 382 a~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~-~~~~~~a~fSs~Gp~~~~~~~lKP 460 (712)
+.|+|++++........+.+|+++++.+++..|+.|++++.++++++.+..++.+ ...+.++.||||||+...+++|||
T Consensus 308 a~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKP 387 (649)
T 3i6s_A 308 KAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKP 387 (649)
T ss_dssp SEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSC
T ss_pred ceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCC
Confidence 9999999988444577889999999999999999999999999999999999988 889999999999999877899999
Q ss_pred cEEeCCCcEEeeecCCccCCCCCCCC-CccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCC-C
Q 045363 461 DIAAPGLDILAAYSELASVTGLPGDR-RIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTK-S 538 (712)
Q Consensus 461 DI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~-~ 538 (712)
||+|||++|+++++..........+. +...|..+||||||||||||+||||||+||+|+|++||++||+||++++.. .
T Consensus 388 DI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~ 467 (649)
T 3i6s_A 388 DILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRK 467 (649)
T ss_dssp CEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSS
T ss_pred eEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCC
Confidence 99999999999998754443333222 335799999999999999999999999999999999999999999998764 2
Q ss_pred ---------CCCCCCCCCCCcCccccCCCCeeeecCcchhhhhhccCCCCccceeeecccccccc--cCCCCCCCCCCCC
Q 045363 539 ---------DDAELASGSGQINPTKAVHPGLIYDLNLSSYTRFLCKEGYNSTAIGRLIGRKKKLN--CSTIRPAQGLDGL 607 (712)
Q Consensus 539 ---------~~~~~~~G~G~in~~~A~~~~lv~~~~~~dy~~~lc~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 607 (712)
+..++.||+|+||+.+|++||||||.+.+||+.|||++||+.++|+.|++ .+++ |+. .+.| |
T Consensus 468 ~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~--~~~~~~C~~----~~~~-l 540 (649)
T 3i6s_A 468 PIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIAR--SSASHNCSN----PSAD-L 540 (649)
T ss_dssp BCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHT--TTSCC-CCC----CCCC-C
T ss_pred cccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeec--CCCcCCCCC----chhh-c
Confidence 23578899999999999999999999999999999999999999999998 6667 975 4678 9
Q ss_pred CCCceeeee-cCCCc-ee--EEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCC
Q 045363 608 NYPSMHFHF-TNESS-IS--AIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGAS 683 (712)
Q Consensus 608 n~ps~~~~~-~~~~~-~~--~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 683 (712)
|||||++.. +. +. .. ++|+|||||||+...+|+++++.|+|++|+|+|.+|+|++.+|+++|+|||+......+.
T Consensus 541 NyPs~~~~~~~~-~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~ 619 (649)
T 3i6s_A 541 NYPSFIALYSIE-GNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQS 619 (649)
T ss_dssp CCSSEEEEECCS-SCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---C
T ss_pred CCCcEEeecccC-CCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCc
Confidence 999999988 44 41 12 899999999999899999999999999999999999998899999999999987655567
Q ss_pred eEEEEEEEEc--CCcEEEeeEEEEec
Q 045363 684 ILSALLEWSD--TKHSVKSPILVYKQ 707 (712)
Q Consensus 684 ~~~G~i~~~~--~~~~v~~P~~~~~~ 707 (712)
|.||+|+|++ ++|.||+||+|+..
T Consensus 620 ~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 620 RNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred eEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 8999999999 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.2e-113 Score=987.50 Aligned_cols=616 Identities=49% Similarity=0.833 Sum_probs=524.2
Q ss_pred cCCCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCC
Q 045363 76 TTRTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDN 155 (712)
Q Consensus 76 ~~~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~ 155 (712)
|+++|+|+|++ ..+|.+..+|+||+|||||||||++||+|+++++++++.+|+|.|+.+.+|. ||+|++++++| ..+
T Consensus 1 tt~s~~flGl~-~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~-~n~k~ig~~~~-~~~ 77 (621)
T 3vta_A 1 TTRSWDFLGFP-LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR-CNRKIIGARSY-HIG 77 (621)
T ss_dssp CCSHHHHTTCC-TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC-CCSSEEEEEEC-CCS
T ss_pred CCCChhHcCCC-ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc-cCcceeeeeec-ccC
Confidence 57899999997 4689999999999999999999999999999999999999999999999998 99999999999 777
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHhCCC
Q 045363 156 ALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIGDGV 235 (712)
Q Consensus 156 ~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~ 235 (712)
......+...++|.+||||||||||||+..++.+..|.+.+.++||||+|+|++||+|++.++..+++++||++|+++|+
T Consensus 78 ~~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~ 157 (621)
T 3vta_A 78 RPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGV 157 (621)
T ss_dssp SSCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTC
T ss_pred CccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCC
Confidence 76666677788999999999999999999888888888888999999999999999999999999999999999999999
Q ss_pred cEEEeccCCCC-CCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEe
Q 045363 236 DLISISIGGPS-RSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTS 314 (712)
Q Consensus 236 dVIN~S~G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~ 314 (712)
||||||||+.. ..+..++++.++++|+++|+++|+||||+|+...++++.+||+++|++++.++.|...+.++++..+.
T Consensus 158 dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~ 237 (621)
T 3vta_A 158 DIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQ 237 (621)
T ss_dssp SEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEE
T ss_pred CEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceee
Confidence 99999999874 34567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCc--hhHHhhccCceEEEEEecCC
Q 045363 315 GISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGS--QDYTIDRLQGAGTIVAVDAP 392 (712)
Q Consensus 315 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~--~~~~~~~~Ga~g~i~~~~~~ 392 (712)
+.++..+ ....++++...+...... .......|.+..+++.+++|||++|.++.. .. .....|+.+++++++..
T Consensus 238 ~~s~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~-~~~~~Ga~gvi~~~~~~ 313 (621)
T 3vta_A 238 GVSINTF--DNQYYPLVSGRDIPNTGF-DKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEF-FKSLDGAAGVLMTSNTR 313 (621)
T ss_dssp EBCCCCS--CCEEECEEETTTSCCTTC-CHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHH-HHHHTTCSEEEEECSCC
T ss_pred eeecccC--CCcccccccccccccccc-cccccccccccccccccccceEEEEecCCChhHH-hhhhcceeEEEEEecCC
Confidence 8877644 356677777665443321 334457799999999999999999998765 33 66778999999887654
Q ss_pred CCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEee
Q 045363 393 TDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAA 472 (712)
Q Consensus 393 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 472 (712)
...+.+.+|...++..++..++.|+..+..+.+++....+..+...+.++.||||||+...++++||||+|||++|+++
T Consensus 314 -~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa 392 (621)
T 3vta_A 314 -DYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAA 392 (621)
T ss_dssp -SSCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEE
T ss_pred -CcccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEee
Confidence 3456778999999999999999999999999988877777766778999999999999877999999999999999999
Q ss_pred ecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCC-CCCCCCCCCCCCcC
Q 045363 473 YSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTK-SDDAELASGSGQIN 551 (712)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~-~~~~~~~~G~G~in 551 (712)
++....... ......|..|||||||||||||+||||||+||+|+|++||++||+||++++.. .+..+++||+|+||
T Consensus 393 ~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~ 469 (621)
T 3vta_A 393 WPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVN 469 (621)
T ss_dssp CCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCC
T ss_pred cCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccC
Confidence 986443332 22345799999999999999999999999999999999999999999999877 67788999999999
Q ss_pred ccccCCCCeeeecCcchhhhhhccCCCCccceeeecccccccccCCCCCCCCCCCCCCCceeeeecCCCceeEEEEEEEE
Q 045363 552 PTKAVHPGLIYDLNLSSYTRFLCKEGYNSTAIGRLIGRKKKLNCSTIRPAQGLDGLNYPSMHFHFTNESSISAIFRRTVT 631 (712)
Q Consensus 552 ~~~A~~~~lv~~~~~~dy~~~lc~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtv~ 631 (712)
+.+|++||||||+..+||+.|||++||+.++|+.+++ ....|+........| ||||||++........+++|+||||
T Consensus 470 ~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-lN~pS~~v~~~~~~~~~~t~~rtvt 546 (621)
T 3vta_A 470 PLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITG--DYSACTSGNTGRVWD-LNYPSFGLSVSPSQTFNQYFNRTLT 546 (621)
T ss_dssp HHHHSCCSEECCCCGGGCC-------------------------------CGGG-SCCSSEEEECCSSCCEEEEEEEEEE
T ss_pred HHHhcCCCeEeecccchhhhhhcccCCCchhheeeec--cccccCCCCcCcccc-cccccEEEEccCCCceEEEEEEEEE
Confidence 9999999999999999999999999999999999999 778898877777889 9999999976543445899999999
Q ss_pred EcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEEEEcCCcEEEeeEEEEec
Q 045363 632 NVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLEWSDTKHSVKSPILVYKQ 707 (712)
Q Consensus 632 n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~~~~~~v~~P~~~~~~ 707 (712)
|+|....||++++++|+|++|+|+|.+|+|++.+|+++|+|||+.. .++.|+||+|+|+|++|.||+||+|+..
T Consensus 547 nvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 547 SVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPITITSL 620 (621)
T ss_dssp ECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEEEEEEECC
T ss_pred ccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEeCEEEEEe
Confidence 9999999999999999999999999999999889999999999865 3478999999999999999999999863
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=6.9e-81 Score=746.41 Aligned_cols=526 Identities=22% Similarity=0.313 Sum_probs=418.3
Q ss_pred ccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCC-----------cccc-CCceeEEeE
Q 045363 82 FLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGA-----------NFTR-CNKKVIGAR 149 (712)
Q Consensus 82 ~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~-----------~f~~-~n~ki~g~~ 149 (712)
+++++ .+|+.+++|+||+|||||||||++||+|.+ +..|++.|..+. ++.. ||+|+++++
T Consensus 3 ~i~~~--~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~ 74 (926)
T 1xf1_A 3 PSQVK--TLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYH 74 (926)
T ss_dssp TTCCH--HHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEE
T ss_pred ccccH--HHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceee
Confidence 45555 899999999999999999999999999984 346777665432 2333 999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC--CChHHHHHHH
Q 045363 150 YYNLDNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG--CADMDILAAF 227 (712)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai 227 (712)
+| .++. ...|..||||||||||||+...+.+. .+.+.||||+|+|+++|+++..+ +...++++||
T Consensus 75 ~~-~~~~--------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai 141 (926)
T 1xf1_A 75 DY-SKDG--------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAI 141 (926)
T ss_dssp ES-CCCS--------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHH
T ss_pred cc-ccCC--------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHH
Confidence 99 5542 22388999999999999987554322 13458999999999999998766 5567899999
Q ss_pred HHHHhCCCcEEEeccCCCC--CCCccchHHHHHHHhhhcCceEEEecCCCCCCC-------------Ccc--ccCCCceE
Q 045363 228 DDAIGDGVDLISISIGGPS--RSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ-------------GTV--ENVAPWIM 290 (712)
Q Consensus 228 ~~a~~~g~dVIN~S~G~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------~~~--~~~~p~vi 290 (712)
++|+++|+||||||||... .....+.+..+++.|.++|++||+||||+|+.. .++ ++.+||+|
T Consensus 142 ~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vi 221 (926)
T 1xf1_A 142 RDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTL 221 (926)
T ss_dssp HHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSE
T ss_pred HHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceE
Confidence 9999999999999999873 234567788888999999999999999999632 222 33479999
Q ss_pred EEceeccCceeEEEEEe-CCCceEeeeeeecCC--CCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEE
Q 045363 291 TVAASSIDRKFVTAVKL-GNGMRTSGISINTFS--PRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYC 367 (712)
Q Consensus 291 tVga~~~~~~~~~~~~~-~~g~~~~g~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~ 367 (712)
+|||++.++.+...+.+ +++....+.++.... .....+|+++... .|.+..+ .+++||||||
T Consensus 222 tVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------------g~~~~~~--~~v~Gkivl~ 286 (926)
T 1xf1_A 222 TVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------------GTKEDDF--KDVKGKIALI 286 (926)
T ss_dssp EEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------------SCSTTTT--TTCTTSEEEE
T ss_pred EEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------------CCCccch--hhcCCeEEEE
Confidence 99999999999988887 666555555443321 2466899988753 4766666 6899999999
Q ss_pred ecCCc-----hhHHhhccCceEEEEEecCCCC----cccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeee--eC
Q 045363 368 LGSGS-----QDYTIDRLQGAGTIVAVDAPTD----IAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVV--NT 436 (712)
Q Consensus 368 ~~~~~-----~~~~~~~~Ga~g~i~~~~~~~~----~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~--~~ 436 (712)
+|+.| .. +++.+|++|+|++++.... ......+|+..++.+++..|+. .+.+++.+..+. ..
T Consensus 287 ~rg~~~~~~k~~-~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~ 359 (926)
T 1xf1_A 287 ERGDIDFKDKIA-KAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLP 359 (926)
T ss_dssp ECCSSCHHHHHH-HHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEE
T ss_pred ECCCCCHHHHHH-HHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecc
Confidence 99877 55 8899999999999987543 2456789999999999998874 234455555443 33
Q ss_pred -CCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHH---
Q 045363 437 -STAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVK--- 512 (712)
Q Consensus 437 -~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~--- 512 (712)
...+.++.||||||+. ++++||||+|||++|++++++ ..|..+||||||||||||+||||+
T Consensus 360 ~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~ 424 (926)
T 1xf1_A 360 TASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQY 424 (926)
T ss_dssp CSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHH
T ss_pred cCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHH
Confidence 5678999999999997 999999999999999999874 359999999999999999999996
Q ss_pred -hhCCCCCHHH----HHHHHHccccCCCCC---CCCCCCCCCCCCcCccccCCCCeeeecCcchhhhhhccCCCCcccee
Q 045363 513 -SFHPDWSPAA----IKSALMTTATPMKTK---SDDAELASGSGQINPTKAVHPGLIYDLNLSSYTRFLCKEGYNSTAIG 584 (712)
Q Consensus 513 -~~~P~lsp~~----ik~~L~~TA~~~~~~---~~~~~~~~G~G~in~~~A~~~~lv~~~~~~dy~~~lc~~g~~~~~~~ 584 (712)
+.||+|+|+| ||++||+||+++... ..+++++||+|+||+.+|+++.+ |||..+++..
T Consensus 425 k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~--- 490 (926)
T 1xf1_A 425 ETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS--- 490 (926)
T ss_dssp HHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS---
T ss_pred hccCCCCCHHHHHHHHHHHHHhcCCCcccCCCCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc---
Confidence 4599999997 999999999998653 13467899999999999999854 5677655321
Q ss_pred eecccccccccCCCCCCCCCCCCCCCceeeeecCCCceeEEEEEEEEEcCCC--CeeEEEEEeC--CCCcEEEEeeceEE
Q 045363 585 RLIGRKKKLNCSTIRPAQGLDGLNYPSMHFHFTNESSISAIFRRTVTNVGFA--KSLYKATVHS--PKGLSVTVSPRVLT 660 (712)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtv~n~~~~--~~ty~~~~~~--~~g~~v~v~p~~~~ 660 (712)
+|.++++. + +++++|||||+|+. ..+|++++.. +++..++|+|..|.
T Consensus 491 --------------------------~i~l~~~~-~--~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~ 541 (926)
T 1xf1_A 491 --------------------------KVHLNNVS-D--KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLY 541 (926)
T ss_dssp --------------------------CEEEEEEC-S--EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred --------------------------eeeccccC-c--cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeE
Confidence 34444443 4 78899999999985 4678877765 67888999887665
Q ss_pred ee-------cCCcEEEEEEEEEecc--------cCCCCeEEEEEEEE--cCCc-EEEeeEEEEecC
Q 045363 661 FS-------RSQQTRSFTVLVKGSM--------QSGASILSALLEWS--DTKH-SVKSPILVYKQF 708 (712)
Q Consensus 661 ~~-------~~~~~~~~~vt~~~~~--------~~~~~~~~G~i~~~--~~~~-~v~~P~~~~~~~ 708 (712)
+. ++||+++|+|||+... ++++.|+||+|+|+ +++| .||+||+++.++
T Consensus 542 ~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 542 ETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGD 607 (926)
T ss_dssp ECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESC
T ss_pred eccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecC
Confidence 54 4599999999999762 24567999999999 4666 599999999987
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.3e-59 Score=531.31 Aligned_cols=340 Identities=30% Similarity=0.414 Sum_probs=278.2
Q ss_pred ccceEEEecceeeeEEEEcCHHHHHHh-----------hcCCCeEEEEeCeeeecccCC---CccccccchhhhccCCCC
Q 045363 31 RESKIRSYGKSFNGFVARLLPHEAKRL-----------SEEESVVSVFENTRRKLHTTR---TWDFLGMSEKLQKRSSKA 96 (712)
Q Consensus 31 ~~~v~~~y~~~~ng~s~~l~~~~i~~l-----------~~~p~V~~V~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~ 96 (712)
..+++++|+ .|+||+++++++++++| +++|+|++|++++.+++.... .+....+....+|+.+++
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 478899995 79999999999999999 889999999999998875432 111222233489999999
Q ss_pred CCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCCCCCCChhHH
Q 045363 97 QSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPVDTDGHGTHT 176 (712)
Q Consensus 97 G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~d~~gHGThV 176 (712)
|+||+|||||||||++||+|.+ ++++.++| .++. ..+.|..||||||
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~-------------------------~i~~~~d~-~~~~-------~~~~D~~gHGThV 184 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQG-------------------------KVIGWVDF-VNGK-------TTPYDDNGHGTHV 184 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTT-------------------------TEEEEEET-TTCC-------SSCCBSSSHHHHH
T ss_pred CCCcEEEEEecCCCCCChHHhC-------------------------CEeeeEEC-CCCC-------CCCCCCCCCHHHH
Confidence 9999999999999999999953 46667777 4432 3567889999999
Q ss_pred HHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC----CCcEEEeccCCCCCCCcc
Q 045363 177 SSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD----GVDLISISIGGPSRSYFD 251 (712)
Q Consensus 177 Agiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIN~S~G~~~~~~~~ 251 (712)
||||+|+..+. .|.+.||||+|+|+++|+++..+ ++.+++++||+||+++ |++|||||||........
T Consensus 185 Agiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~ 257 (539)
T 3afg_A 185 ASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGT 257 (539)
T ss_dssp HHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSC
T ss_pred HHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccc
Confidence 99999985431 23348999999999999998876 7788999999999985 899999999987544456
Q ss_pred chHHHHHHHhhhcCceEEEecCCCCCCCC--ccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecCCCCCceee
Q 045363 252 DSISIGSFHAMKKGILTACSAGNDGPYQG--TVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTFSPRKAMYP 329 (712)
Q Consensus 252 ~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 329 (712)
+.+..++.++.++|++||+||||+|+... ..+...+++|+|||++.+
T Consensus 258 ~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~------------------------------- 306 (539)
T 3afg_A 258 DSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY------------------------------- 306 (539)
T ss_dssp SHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT-------------------------------
T ss_pred hHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC-------------------------------
Confidence 78888888999999999999999997543 346678999999986422
Q ss_pred eEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceeeeEEEeChh
Q 045363 330 LTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAGTFVVPE 409 (712)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~ 409 (712)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCcc
Q 045363 410 VGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIV 489 (712)
Q Consensus 410 ~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~ 489 (712)
+.++.||||||+. ++++||||+|||++|++++...... .+....
T Consensus 307 ------------------------------~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~ 350 (539)
T 3afg_A 307 ------------------------------DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPIND 350 (539)
T ss_dssp ------------------------------SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSS
T ss_pred ------------------------------cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcc
Confidence 2678999999998 8999999999999999998642100 011113
Q ss_pred ceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccCCCC
Q 045363 490 PFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAVHPG 559 (712)
Q Consensus 490 ~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~~~~ 559 (712)
.|..++|||||||||||++|||+|++|+|++++||++|++||+++... ...+..||+|+||+.+|++..
T Consensus 351 ~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~-~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 351 YYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPD-EIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGG-GCSBTTTBTCBCCHHHHHTGG
T ss_pred cccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC-CCCccCccCCccCHHHHhhhc
Confidence 599999999999999999999999999999999999999999987642 125788999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.2e-56 Score=491.32 Aligned_cols=320 Identities=26% Similarity=0.358 Sum_probs=266.1
Q ss_pred ccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeeccc--------------CCCccccccchhhhccCCCC
Q 045363 31 RESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKLHT--------------TRTWDFLGMSEKLQKRSSKA 96 (712)
Q Consensus 31 ~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~~~--------------~~s~~~~~~~~~~~~~~~~~ 96 (712)
..+++++|. .|++|+++++++++++|+++|+|++|++++.++++. ...|.+..+....+|+.+ +
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~ 100 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-D 100 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-S
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-C
Confidence 578999995 599999999999999999999999999999887642 134544445556899998 9
Q ss_pred CCC--cEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCCCCCCChh
Q 045363 97 QSN--IIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPVDTDGHGT 174 (712)
Q Consensus 97 G~g--v~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~d~~gHGT 174 (712)
|+| |+|||||||||++||+|.+ ++...++| ..+.. ..+.....|..||||
T Consensus 101 G~g~~v~VaViDtGid~~Hp~l~~-------------------------~~~~~~~~-~~~~~--~~~~~~~~d~~gHGT 152 (395)
T 2z2z_A 101 GSVSVIQVAVLDTGVDYDHPDLAA-------------------------NIAWCVST-LRGKV--STKLRDCADQNGHGT 152 (395)
T ss_dssp SCCTTCEEEEEESCBCTTCTTTGG-------------------------GEEEEEEC-GGGCC--BCCHHHHBCSSSHHH
T ss_pred CCCCcEEEEEEcCCCCCCChhHhh-------------------------ccccCccc-cCCcc--cCCCCCCCCCCCCHH
Confidence 999 9999999999999999964 24445555 33210 000112467899999
Q ss_pred HHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC--------------------
Q 045363 175 HTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD-------------------- 233 (712)
Q Consensus 175 hVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~-------------------- 233 (712)
||||||+|.. ++. | +.||||+|+|+.+|+++..+ ++.+++++||+||+++
T Consensus 153 ~vAgiia~~~-n~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~ 223 (395)
T 2z2z_A 153 HVIGTIAALN-NDI---G-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDD 223 (395)
T ss_dssp HHHHHHHCCC-SSS---S-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSC
T ss_pred HHHHHHHeec-CCC---c-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCC
Confidence 9999999983 222 1 28999999999999998876 7788999999999988
Q ss_pred CCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceE
Q 045363 234 GVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRT 313 (712)
Q Consensus 234 g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~ 313 (712)
+++|||||||... ....+..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 224 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 285 (395)
T 2z2z_A 224 AAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN--------------- 285 (395)
T ss_dssp CCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------------
T ss_pred CCeEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC---------------
Confidence 9999999999864 2356667777889999999999999998877888889999999987532
Q ss_pred eeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCC
Q 045363 314 SGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPT 393 (712)
Q Consensus 314 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 393 (712)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeee
Q 045363 394 DIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAY 473 (712)
Q Consensus 394 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 473 (712)
+.++.||++|| +|+|||++|++++
T Consensus 286 ----------------------------------------------~~~a~fS~~G~----------~v~APG~~i~s~~ 309 (395)
T 2z2z_A 286 ----------------------------------------------DNIASFSNRQP----------EVSAPGVDILSTY 309 (395)
T ss_dssp ----------------------------------------------SCBCTTSCSSC----------SEEEECSSEEEEE
T ss_pred ----------------------------------------------CCCCcccCCCC----------CEEeCCCCeeeec
Confidence 36789999997 6799999999998
Q ss_pred cCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCC-------------CCCHHHHHHHHHccccCCCCCCCC
Q 045363 474 SELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHP-------------DWSPAAIKSALMTTATPMKTKSDD 540 (712)
Q Consensus 474 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-------------~lsp~~ik~~L~~TA~~~~~~~~~ 540 (712)
+. +.|..++|||||||||||++|||+|++| .|++.+||++|++||+++... .
T Consensus 310 ~~-------------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~--g 374 (395)
T 2z2z_A 310 PD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT--G 374 (395)
T ss_dssp TT-------------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS--S
T ss_pred CC-------------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC--C
Confidence 74 3599999999999999999999999999 999999999999999998652 2
Q ss_pred CCCCCCCCCcCccccCCC
Q 045363 541 AELASGSGQINPTKAVHP 558 (712)
Q Consensus 541 ~~~~~G~G~in~~~A~~~ 558 (712)
.+..||||+||+.+|++.
T Consensus 375 ~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 375 WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp SBTTTBTCBCCHHHHHHH
T ss_pred CCCCccCceeCHHHHHHH
Confidence 578899999999999873
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=5.9e-56 Score=497.95 Aligned_cols=334 Identities=20% Similarity=0.253 Sum_probs=267.8
Q ss_pred ccccceEEEecceeeeEEEEcCHHHHHHhhc-CCCeEEEEeCeeeecccC-------------CCccccccchh-hhccC
Q 045363 29 LARESKIRSYGKSFNGFVARLLPHEAKRLSE-EESVVSVFENTRRKLHTT-------------RTWDFLGMSEK-LQKRS 93 (712)
Q Consensus 29 ~~~~~v~~~y~~~~ng~s~~l~~~~i~~l~~-~p~V~~V~~~~~~~~~~~-------------~s~~~~~~~~~-~~~~~ 93 (712)
....+++++| ..|++|+++++++++++|++ +|+|++|++++.+++... .+|.+..+... .+|+.
T Consensus 63 ~~g~~v~~~~-~~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~ 141 (471)
T 3t41_A 63 KKSLNVVYNI-PELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD 141 (471)
T ss_dssp HHTCEEEEEE-GGGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG
T ss_pred hCCCEEEEec-CCccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc
Confidence 3457788888 55999999999999999999 999999999988776543 24666666544 79999
Q ss_pred CCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCCCCCCCh
Q 045363 94 SKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPVDTDGHG 173 (712)
Q Consensus 94 ~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~d~~gHG 173 (712)
+.+|+||+|||||||||++||+|.+... .+. ..++....| .........+...+.|..|||
T Consensus 142 ~~~G~gv~VaViDtGid~~Hp~~~~~~~-------~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~d~~gHG 202 (471)
T 3t41_A 142 LPKHANTKIAIIDTGVMKNHDDLKNNFS-------TDS-----------KNLVPLNGF-RGTEPEETGDVHDVNDRKGHG 202 (471)
T ss_dssp CCSSCCCCEEEEESCCCTTCTTTTTTBC-------TTC-----------EECCCTTCG-GGCCTTCCCCTTCCCCSSSHH
T ss_pred cCCCCCcEEEEEeCCCCCCChhHhcCcc-------cCC-----------cccccCCCc-cCCCcccCCCCCCCcCCCCcc
Confidence 9999999999999999999999986421 110 001111112 111111122334567899999
Q ss_pred hHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHhCCCcEEEeccCCCCC-C----
Q 045363 174 THTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIGDGVDLISISIGGPSR-S---- 248 (712)
Q Consensus 174 ThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~S~G~~~~-~---- 248 (712)
|||||||+|++. +.||||+|+|+++|+++...+...++++||+||++++++|||||||.... .
T Consensus 203 T~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~ 270 (471)
T 3t41_A 203 TMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDH 270 (471)
T ss_dssp HHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCC
T ss_pred chhhheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccc
Confidence 999999998642 38999999999999998877889999999999999999999999997410 0
Q ss_pred --------CccchHHHHHHHhhhcCceEEEecCCCCCCCC------------------ccccCCCceEEEceeccCceeE
Q 045363 249 --------YFDDSISIGSFHAMKKGILTACSAGNDGPYQG------------------TVENVAPWIMTVAASSIDRKFV 302 (712)
Q Consensus 249 --------~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~------------------~~~~~~p~vitVga~~~~~~~~ 302 (712)
...+.+..++..+.++|++||+||||+|.... ..++..|++|+|||++.+
T Consensus 271 ~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~---- 346 (471)
T 3t41_A 271 QTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK---- 346 (471)
T ss_dssp CSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT----
T ss_pred cccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC----
Confidence 12356777888889999999999999997643 256677899999986532
Q ss_pred EEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCc
Q 045363 303 TAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQG 382 (712)
Q Consensus 303 ~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga 382 (712)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcE
Q 045363 383 AGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDI 462 (712)
Q Consensus 383 ~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI 462 (712)
+.++.||++||+. |||
T Consensus 347 ---------------------------------------------------------~~~a~fS~~G~~~-------~di 362 (471)
T 3t41_A 347 ---------------------------------------------------------SNLSEFSNFGMNY-------TDI 362 (471)
T ss_dssp ---------------------------------------------------------SSBCTTCCBCTTT-------CCE
T ss_pred ---------------------------------------------------------CCCCCccCCCCCC-------CeE
Confidence 3688999999973 599
Q ss_pred EeCCCc----------------------EEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCC-CCC
Q 045363 463 AAPGLD----------------------ILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHP-DWS 519 (712)
Q Consensus 463 ~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~ls 519 (712)
+|||++ |+++++. ..|..++|||||||||||++|||+|++| .|+
T Consensus 363 ~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~ 429 (471)
T 3t41_A 363 AAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKH 429 (471)
T ss_dssp EEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred EecCCCcccccccccccccccccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCC
Confidence 999987 8888764 3599999999999999999999999999 899
Q ss_pred HHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccCCC
Q 045363 520 PAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAVHP 558 (712)
Q Consensus 520 p~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~~~ 558 (712)
|++||++|++||++.... ++..||||+||+.+|++.
T Consensus 430 ~~~v~~~L~~tA~~~~~~---~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 430 PDKAIELLYQHGTSKNNK---PFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHHHHHHHSBCCSCC---CHHHHTTCBBCHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCC---CcCccccChhCHHHHHHH
Confidence 999999999999987653 778899999999999984
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.6e-54 Score=479.46 Aligned_cols=382 Identities=20% Similarity=0.299 Sum_probs=275.5
Q ss_pred CCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCC
Q 045363 78 RTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNAL 157 (712)
Q Consensus 78 ~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~ 157 (712)
.+|.+..+.+..+|+.+ |+||+|||||||||++||+|.+. ++..+++...+
T Consensus 4 ~~W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------------------------~~~~~~~~~~~-- 54 (441)
T 1y9z_A 4 TPWGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------------------------NVTGTNNSGTG-- 54 (441)
T ss_dssp CCHHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------------------------EEEECCCTTSC--
T ss_pred CCCChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------------------------cccCcccCCCC--
Confidence 46777667667899865 77999999999999999999743 11122220111
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCC--eEEEEEeecCCC-CChHHHHHHHHHHHhC-
Q 045363 158 DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSA--RIAMYKVCWSGG-CADMDILAAFDDAIGD- 233 (712)
Q Consensus 158 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~a~~~- 233 (712)
+...+.|..||||||||||+|..++ .| +.||||+| +|+.+|+++..+ ++.+++++||+||+++
T Consensus 55 ----~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~ 121 (441)
T 1y9z_A 55 ----NWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSG 121 (441)
T ss_dssp ----CTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTT
T ss_pred ----CCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhc
Confidence 1234668899999999999998632 12 38999995 999999998877 7888999999999999
Q ss_pred CCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeC-----
Q 045363 234 GVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLG----- 308 (712)
Q Consensus 234 g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~----- 308 (712)
|++|||||||... ....+..++.++.++|++||+||||+|.....+++..+++|+|||++.+.....+...+
T Consensus 122 g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv 198 (441)
T 1y9z_A 122 GANVVTMSLGGSG---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEI 198 (441)
T ss_dssp CCSEEEECCCBSC---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEE
T ss_pred CCcEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEE
Confidence 9999999999864 23456667778999999999999999988778888899999999998765332211111
Q ss_pred --------------CCc----eEeeeeeecCCC--CCceee--eEecccccccccccccCcCCCCCC--CCCCCcccceE
Q 045363 309 --------------NGM----RTSGISINTFSP--RKAMYP--LTNGARAANVTAEIYGNVGACDYG--TLSMKKVKGKI 364 (712)
Q Consensus 309 --------------~g~----~~~g~~~~~~~~--~~~~~~--l~~~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~gki 364 (712)
++. .+.|.+++.... ....++ +.+..+..... .......|... .++..+++|||
T Consensus 199 ~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~--~~~~~~~C~~~~~~~~~~~~~gki 276 (441)
T 1y9z_A 199 SGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINAS--ATGALAECTVNGTSFSCGNMANKI 276 (441)
T ss_dssp EEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCE--EEEEEEEEEEETTEEECCCCTTEE
T ss_pred EeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccc--cccchhccccccccccCCCccccE
Confidence 111 122222221110 000000 11110000000 01122457643 56788999999
Q ss_pred EEEecCCc----------hhHHhhccCceEEEEEecCCCC---------cccceeeeEEEeChhhHHHHHHHHhcCCCce
Q 045363 365 VYCLGSGS----------QDYTIDRLQGAGTIVAVDAPTD---------IAIATLIAGTFVVPEVGIKIDQYINSTKNPQ 425 (712)
Q Consensus 365 vl~~~~~~----------~~~~~~~~Ga~g~i~~~~~~~~---------~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~ 425 (712)
++|+|+.+ .. +++.+|+.|+|++++.... ......+|.+.++.++|..|+.|+.++
T Consensus 277 vl~~rg~~~~~~~~~~~~~~-~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~---- 351 (441)
T 1y9z_A 277 CLVERVGNQGSSYPEINSTK-ACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS---- 351 (441)
T ss_dssp EEEECCSCSSSSCTHHHHHH-HHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----
T ss_pred EEEeccccCcccccHHHHHH-HHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----
Confidence 99999754 45 7899999999999876421 124567899999999999999876431
Q ss_pred EEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHH
Q 045363 426 AVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAA 505 (712)
Q Consensus 426 ~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VA 505 (712)
. .+ ++.. ...|..++||||||||||
T Consensus 352 ~----------------------------------t~--------~~~~-------------~~~y~~~sGTSmAaP~VA 376 (441)
T 1y9z_A 352 T----------------------------------TV--------SNQG-------------NQDYEYYNGTSMATPHVS 376 (441)
T ss_dssp E----------------------------------EE--------EEEE-------------EESEEEECSHHHHHHHHH
T ss_pred c----------------------------------cc--------cccc-------------CCCceeecccccCCcccc
Confidence 0 11 1111 135999999999999999
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccCCCCeeeecCcchhhhhhccCCCC
Q 045363 506 AAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAVHPGLIYDLNLSSYTRFLCKEGYN 579 (712)
Q Consensus 506 G~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~~~~lv~~~~~~dy~~~lc~~g~~ 579 (712)
|++|||+|+||+|+|++||++||+||++++... .+.+||+|+||+.+|+ ||+.|||+.++.
T Consensus 377 G~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g--~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 377 GVATLVWSYHPECSASQVRAALNATADDLSVAG--RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS--CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred hHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC--CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 999999999999999999999999999987642 4678999999999995 599999998774
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=5.2e-53 Score=482.68 Aligned_cols=349 Identities=22% Similarity=0.255 Sum_probs=262.3
Q ss_pred ccceEEEecceeeeEEEEcCH----HHHHHhhc--CCCeEEEEeCeeeeccc----------------------------
Q 045363 31 RESKIRSYGKSFNGFVARLLP----HEAKRLSE--EESVVSVFENTRRKLHT---------------------------- 76 (712)
Q Consensus 31 ~~~v~~~y~~~~ng~s~~l~~----~~i~~l~~--~p~V~~V~~~~~~~~~~---------------------------- 76 (712)
..++.+++ ..+++++++++. +.+++|++ +|+|++|||++.+++..
T Consensus 52 g~~v~~~~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEc-CCCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 46777888 678999999864 34566764 79999999997655431
Q ss_pred --CCCccccccchhhh-ccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccC
Q 045363 77 --TRTWDFLGMSEKLQ-KRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNL 153 (712)
Q Consensus 77 --~~s~~~~~~~~~~~-~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~ 153 (712)
...|.+..++...+ |+. .+|+||+|||||||||++||+|.+.. +.++++..
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~-------------------------~~g~~~~~ 184 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV-------------------------IAGYRPAF 184 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB-------------------------CCEEEGGG
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE-------------------------EecccccC
Confidence 12343334444567 988 89999999999999999999997531 11111101
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecC------CC-CChHHHHHH
Q 045363 154 DNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWS------GG-CADMDILAA 226 (712)
Q Consensus 154 ~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~a 226 (712)
+... + ...+..|.+||||||||||||.. ++. | +.||||+|+|+++|+++. .+ .....+++|
T Consensus 185 ~~~~--p-~~~d~~d~~gHGThVAGiIAa~~-ng~---g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~a 252 (671)
T 1r6v_A 185 DEEL--P-AGTDSSYGGSAGTHVAGTIAAKK-DGK---G-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAG 252 (671)
T ss_dssp TEEE--C-TTCBCCTTCSHHHHHHHHHHCCC-SSS---S-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHH
T ss_pred CCcC--C-CCCCCccCCCcchhhhhhhhccC-CCC---c-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHH
Confidence 1000 0 00234467899999999999974 221 2 289999999999999986 22 345678999
Q ss_pred HHHHHhCCCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC-CccccCCCceEEEceeccCceeEEEE
Q 045363 227 FDDAIGDGVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ-GTVENVAPWIMTVAASSIDRKFVTAV 305 (712)
Q Consensus 227 i~~a~~~g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~ 305 (712)
|+||+++|++|||||||... ....+..++..|.++|++||+||||+|... ...++..|++|+|||++.+..
T Consensus 253 i~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~----- 324 (671)
T 1r6v_A 253 IIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG----- 324 (671)
T ss_dssp HHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-----
T ss_pred HHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-----
Confidence 99999999999999999863 345677788889999999999999999765 566778899999999753310
Q ss_pred EeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEE
Q 045363 306 KLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGT 385 (712)
Q Consensus 306 ~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~ 385 (712)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeC
Q 045363 386 IVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAP 465 (712)
Q Consensus 386 i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 465 (712)
...++.||++||.. ||+||
T Consensus 325 -----------------------------------------------------~~~~a~fSn~G~~v--------dv~AP 343 (671)
T 1r6v_A 325 -----------------------------------------------------TFRVAGFSSRSDGV--------SVGAP 343 (671)
T ss_dssp -----------------------------------------------------EEEECSSSCCCTTE--------EEEEE
T ss_pred -----------------------------------------------------ceeeccccCCCCCe--------eEEec
Confidence 01478999999987 99999
Q ss_pred CCcEEeeecCCccCCC-----CCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCC
Q 045363 466 GLDILAAYSELASVTG-----LPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDD 540 (712)
Q Consensus 466 G~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~ 540 (712)
|++|+++++....... .........|..++|||||||||||++|||+|++|+|++.+||++|++||+++... .
T Consensus 344 G~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~--g 421 (671)
T 1r6v_A 344 GVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN--G 421 (671)
T ss_dssp CSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS--S
T ss_pred CCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC--C
Confidence 9999999875321100 00011124699999999999999999999999999999999999999999988653 2
Q ss_pred CCCCCCCCCcCccccCCCCeeeecCcchh
Q 045363 541 AELASGSGQINPTKAVHPGLIYDLNLSSY 569 (712)
Q Consensus 541 ~~~~~G~G~in~~~A~~~~lv~~~~~~dy 569 (712)
.+..||||+||+.+|++..|..+....||
T Consensus 422 ~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 422 WDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp CBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 46789999999999999877665544443
No 9
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2.9e-52 Score=435.12 Aligned_cols=269 Identities=28% Similarity=0.357 Sum_probs=222.5
Q ss_pred CCCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCC
Q 045363 77 TRTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNA 156 (712)
Q Consensus 77 ~~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~ 156 (712)
..+|.+..++...+|+.+..|+||+|+|||||||++||+|.+ +++..++| .++.
T Consensus 10 ~~~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~-------------------------~~~~~~~~-~~~~ 63 (280)
T 1dbi_A 10 GYQYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG-------------------------KVIKGYDF-VDND 63 (280)
T ss_dssp HHCCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT-------------------------TEEEEEET-TTTB
T ss_pred cCCCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc-------------------------Ccccceec-cCCC
Confidence 346777777778999999888899999999999999999964 34556667 3321
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCCC
Q 045363 157 LDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDGV 235 (712)
Q Consensus 157 ~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~ 235 (712)
..+.|..+|||||||||+|...++.+ +.||||+|+|+.+|+++..+ ++.+++++||+||+++|+
T Consensus 64 -------~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 64 -------YDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp -------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred -------CCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCC
Confidence 34578899999999999998655332 28999999999999998766 788899999999999999
Q ss_pred cEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEee
Q 045363 236 DLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSG 315 (712)
Q Consensus 236 dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g 315 (712)
+|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 129 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------- 188 (280)
T 1dbi_A 129 EVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY----------------- 188 (280)
T ss_dssp SEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-----------------
T ss_pred CEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-----------------
Confidence 99999999863 3456777788899999999999999998777778888999999986532
Q ss_pred eeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCc
Q 045363 316 ISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDI 395 (712)
Q Consensus 316 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~ 395 (712)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecC
Q 045363 396 AIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSE 475 (712)
Q Consensus 396 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 475 (712)
+.++.||++||.. ||+|||.+|+++++.
T Consensus 189 --------------------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~ 216 (280)
T 1dbi_A 189 --------------------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG 216 (280)
T ss_dssp --------------------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT
T ss_pred --------------------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCC
Confidence 3678899999865 999999999999864
Q ss_pred CccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCcccc
Q 045363 476 LASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKA 555 (712)
Q Consensus 476 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A 555 (712)
+.|..++|||||||||||++|||++ |.+++.+||++|++||+++.. ....||+|+||+.+|
T Consensus 217 -------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~----~~~~~G~G~vn~~~A 277 (280)
T 1dbi_A 217 -------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG----TGTYFKYGRINSYNA 277 (280)
T ss_dssp -------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT----BTTTBSSEECCHHHH
T ss_pred -------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC----CCCcccCCEECHHHH
Confidence 3599999999999999999999987 899999999999999999875 356799999999999
Q ss_pred CC
Q 045363 556 VH 557 (712)
Q Consensus 556 ~~ 557 (712)
++
T Consensus 278 ~~ 279 (280)
T 1dbi_A 278 VT 279 (280)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.8e-52 Score=432.51 Aligned_cols=265 Identities=31% Similarity=0.452 Sum_probs=227.0
Q ss_pred CCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCC
Q 045363 78 RTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNAL 157 (712)
Q Consensus 78 ~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~ 157 (712)
.+|.+..++...+|+.+++|+||+|+|||||| .+||+|+ +...++| ..+.
T Consensus 4 ~~W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~---------------------------~~~~~~~-~~~~- 53 (269)
T 1gci_A 4 VPWGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN---------------------------IRGGASF-VPGE- 53 (269)
T ss_dssp CCHHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC---------------------------EEEEEEC-STTC-
T ss_pred CCcChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc---------------------------ccCCccc-CCCC-
Confidence 46777777778999999999999999999999 8999993 2344555 3321
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCCCc
Q 045363 158 DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDGVD 236 (712)
Q Consensus 158 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~d 236 (712)
..+.|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+ ++.+++++||+||++++++
T Consensus 54 ------~~~~d~~gHGT~vAgiia~~~-~~~---~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~ 118 (269)
T 1gci_A 54 ------PSTQDGNGHGTHVAGTIAALN-NSI---G-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMH 118 (269)
T ss_dssp ------CSCSCSSSHHHHHHHHHHCCC-SSS---B-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCS
T ss_pred ------CCCCCCCCChHHHHHHHhcCc-CCC---C-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCe
Confidence 235688999999999999973 211 1 28999999999999998766 6788999999999999999
Q ss_pred EEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEeee
Q 045363 237 LISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGI 316 (712)
Q Consensus 237 VIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~ 316 (712)
|||||||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 119 Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------ 177 (269)
T 1gci_A 119 VANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------ 177 (269)
T ss_dssp EEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT------------------
T ss_pred EEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC------------------
Confidence 9999999864 2456777778889999999999999998877788888999999986532
Q ss_pred eeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcc
Q 045363 317 SINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIA 396 (712)
Q Consensus 317 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 396 (712)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCC
Q 045363 397 IATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSEL 476 (712)
Q Consensus 397 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 476 (712)
+.++.||++||.. ||+|||.+|+++++.
T Consensus 178 -------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~- 205 (269)
T 1gci_A 178 -------------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG- 205 (269)
T ss_dssp -------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT-
T ss_pred -------------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCC-
Confidence 3678899999976 999999999999864
Q ss_pred ccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccC
Q 045363 477 ASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAV 556 (712)
Q Consensus 477 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~ 556 (712)
..|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .+..||||+||+.+|+
T Consensus 206 ------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g-----~~~~~G~G~vn~~~A~ 268 (269)
T 1gci_A 206 ------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG-----STNLYGSGLVNAEAAT 268 (269)
T ss_dssp ------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS-----CHHHHTTCBCCHHHHT
T ss_pred ------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC-----CCCCcccCccCHHHHc
Confidence 35899999999999999999999999999999999999999999986 3678999999999998
Q ss_pred C
Q 045363 557 H 557 (712)
Q Consensus 557 ~ 557 (712)
+
T Consensus 269 ~ 269 (269)
T 1gci_A 269 R 269 (269)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.3e-52 Score=434.75 Aligned_cols=266 Identities=30% Similarity=0.428 Sum_probs=225.2
Q ss_pred CCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCC
Q 045363 78 RTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNAL 157 (712)
Q Consensus 78 ~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~ 157 (712)
.+|.+..++...+|+.+++|+||+|+|||||||++||+|+ +...++| ..+.
T Consensus 4 ~~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~---------------------------~~~g~~~-~~~~- 54 (274)
T 1r0r_E 4 VPYGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN---------------------------VVGGASF-VAGE- 54 (274)
T ss_dssp CCTHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC---------------------------EEEEEEC-STTC-
T ss_pred CCCchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc---------------------------CCCCccc-cCCC-
Confidence 4677777777899999999999999999999999999993 2344555 3321
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCCCc
Q 045363 158 DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDGVD 236 (712)
Q Consensus 158 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~d 236 (712)
....|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+ ++.+++++||+||++++++
T Consensus 55 ------~~~~d~~gHGT~vAgiia~~~-~~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~ 119 (274)
T 1r0r_E 55 ------AYNTDGNGHGTHVAGTVAALD-NTT---G-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMD 119 (274)
T ss_dssp ------CTTCCSSSHHHHHHHHHHCCS-SSS---B-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCS
T ss_pred ------CCCCCCCCCHHHHHHHHHccC-CCC---c-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCC
Confidence 235678999999999999973 211 1 28999999999999998776 6788999999999999999
Q ss_pred EEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC----CccccCCCceEEEceeccCceeEEEEEeCCCce
Q 045363 237 LISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ----GTVENVAPWIMTVAASSIDRKFVTAVKLGNGMR 312 (712)
Q Consensus 237 VIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~ 312 (712)
|||||||... ....+..++.++.++|++||+||||+|... ...+...|++|+||+++.+
T Consensus 120 Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~-------------- 182 (274)
T 1r0r_E 120 VINMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN-------------- 182 (274)
T ss_dssp EEEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT--------------
T ss_pred EEEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC--------------
Confidence 9999999864 245677778888999999999999999753 3456777899999986422
Q ss_pred EeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCC
Q 045363 313 TSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAP 392 (712)
Q Consensus 313 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~ 392 (712)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEee
Q 045363 393 TDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAA 472 (712)
Q Consensus 393 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 472 (712)
+.++.||++||.. ||+|||.+|+++
T Consensus 183 -----------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~ 207 (274)
T 1r0r_E 183 -----------------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYST 207 (274)
T ss_dssp -----------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEE
T ss_pred -----------------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEee
Confidence 3678899999865 999999999999
Q ss_pred ecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCc
Q 045363 473 YSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINP 552 (712)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~ 552 (712)
++. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++. .+..||||+||+
T Consensus 208 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-----~~~~~G~G~~~~ 269 (274)
T 1r0r_E 208 YPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-----SSFYYGKGLINV 269 (274)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-----CHHHHTTCBCCH
T ss_pred cCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-----CCCCcccCccCH
Confidence 864 35999999999999999999999999999999999999999999985 467899999999
Q ss_pred cccCC
Q 045363 553 TKAVH 557 (712)
Q Consensus 553 ~~A~~ 557 (712)
.+|++
T Consensus 270 ~~A~~ 274 (274)
T 1r0r_E 270 EAAAQ 274 (274)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99985
No 12
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=8e-52 Score=432.03 Aligned_cols=268 Identities=29% Similarity=0.432 Sum_probs=225.4
Q ss_pred CCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCC
Q 045363 78 RTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNAL 157 (712)
Q Consensus 78 ~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~ 157 (712)
.+|.+..+++..+|..+++|+||+|||||||||++||+|+ +...++| ..+.
T Consensus 4 ~~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~---------------------------~~~g~~~-~~~~- 54 (281)
T 1to2_E 4 VPYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK---------------------------VAGGASM-VPSE- 54 (281)
T ss_dssp CCHHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC---------------------------EEEEEEC-CTTC-
T ss_pred CCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc---------------------------CcCCccc-cCCC-
Confidence 4677777777899999999999999999999999999994 2334445 3221
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCCCc
Q 045363 158 DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDGVD 236 (712)
Q Consensus 158 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~d 236 (712)
.....|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+ +..++++++|+|+++++++
T Consensus 55 -----~~~~~d~~gHGT~vAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~ 120 (281)
T 1to2_E 55 -----TNPFQDNNSHGTHVAGTVAALN-NSI---G-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMD 120 (281)
T ss_dssp -----CCTTCCSSSHHHHHHHHHHCCS-SSS---S-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCS
T ss_pred -----CCCCCCCCCcHHHHHHHHhccC-CCC---c-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCc
Confidence 1123678999999999999973 211 1 28999999999999998766 6788999999999999999
Q ss_pred EEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC----CccccCCCceEEEceeccCceeEEEEEeCCCce
Q 045363 237 LISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ----GTVENVAPWIMTVAASSIDRKFVTAVKLGNGMR 312 (712)
Q Consensus 237 VIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~ 312 (712)
|||||||... ....+..++.++.++|++||+||||+|... ...+...|++|+|||++.+
T Consensus 121 Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~-------------- 183 (281)
T 1to2_E 121 VINMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS-------------- 183 (281)
T ss_dssp EEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT--------------
T ss_pred EEEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC--------------
Confidence 9999999864 245677778888999999999999999762 3456777899999986422
Q ss_pred EeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCC
Q 045363 313 TSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAP 392 (712)
Q Consensus 313 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~ 392 (712)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEee
Q 045363 393 TDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAA 472 (712)
Q Consensus 393 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 472 (712)
+.++.||++||.. ||+|||.+|+++
T Consensus 184 -----------------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~ 208 (281)
T 1to2_E 184 -----------------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQST 208 (281)
T ss_dssp -----------------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEE
T ss_pred -----------------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEee
Confidence 3678899999865 999999999999
Q ss_pred ecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCc
Q 045363 473 YSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINP 552 (712)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~ 552 (712)
++. +.|..++|||||||+|||++|||+|++|+|++++||++|++||+++. .+..||||+||+
T Consensus 209 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-----~~~~~G~G~v~~ 270 (281)
T 1to2_E 209 LPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG-----DSFYYGKGLINV 270 (281)
T ss_dssp ETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-----CHHHHTTCBCCH
T ss_pred cCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-----CCCCcccceecH
Confidence 864 35899999999999999999999999999999999999999999985 467899999999
Q ss_pred cccCCC
Q 045363 553 TKAVHP 558 (712)
Q Consensus 553 ~~A~~~ 558 (712)
.+|+++
T Consensus 271 ~~a~~~ 276 (281)
T 1to2_E 271 QAAAQH 276 (281)
T ss_dssp HHHTSS
T ss_pred HHHhhh
Confidence 999985
No 13
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.7e-51 Score=429.38 Aligned_cols=267 Identities=28% Similarity=0.385 Sum_probs=228.0
Q ss_pred CCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCC
Q 045363 78 RTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNAL 157 (712)
Q Consensus 78 ~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~ 157 (712)
..|.+..+++..+|+.. +|+||+|+|||||||++||+|.+ +++..++| .++.
T Consensus 11 ~~w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~-------------------------~~~~~~~~-~~~~- 62 (279)
T 1thm_A 11 RQYGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG-------------------------KVVGGWDF-VDND- 62 (279)
T ss_dssp HCCHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT-------------------------TEEEEEET-TTTB-
T ss_pred cccChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhc-------------------------Cccccccc-cCCC-
Confidence 46777777778999987 79999999999999999999964 34556667 4331
Q ss_pred CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCCCc
Q 045363 158 DPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDGVD 236 (712)
Q Consensus 158 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~d 236 (712)
..+.|..+|||||||||+|...++.+ +.||||+|+|+.+|+++..+ ++..++++||+||++++++
T Consensus 63 ------~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~ 128 (279)
T 1thm_A 63 ------STPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAK 128 (279)
T ss_dssp ------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCS
T ss_pred ------CCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCC
Confidence 34578899999999999998755432 28999999999999998766 7788999999999999999
Q ss_pred EEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEeee
Q 045363 237 LISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGI 316 (712)
Q Consensus 237 VIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~ 316 (712)
|||||||... ....+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 129 Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------ 187 (279)
T 1thm_A 129 VISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------------ 187 (279)
T ss_dssp EEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT------------------
T ss_pred EEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC------------------
Confidence 9999999863 2456777788899999999999999998777788888999999986532
Q ss_pred eeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcc
Q 045363 317 SINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIA 396 (712)
Q Consensus 317 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 396 (712)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCC
Q 045363 397 IATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSEL 476 (712)
Q Consensus 397 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 476 (712)
+.++.||++|+.. ||+|||.+|+++++.
T Consensus 188 -------------------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~- 215 (279)
T 1thm_A 188 -------------------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT- 215 (279)
T ss_dssp -------------------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT-
T ss_pred -------------------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCC-
Confidence 3678899999865 999999999999864
Q ss_pred ccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccC
Q 045363 477 ASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAV 556 (712)
Q Consensus 477 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~ 556 (712)
..|..++|||||||||||++||| ++|.+++++||++|++||+++... ...||+|+||+.+|+
T Consensus 216 ------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~----~~~~G~G~vn~~~A~ 277 (279)
T 1thm_A 216 ------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT----GTYWAKGRVNAYKAV 277 (279)
T ss_dssp ------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB----TTTBSSEECCHHHHH
T ss_pred ------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC----CccccCCeeCHHHHh
Confidence 35999999999999999999999 589999999999999999998763 367999999999997
Q ss_pred C
Q 045363 557 H 557 (712)
Q Consensus 557 ~ 557 (712)
+
T Consensus 278 ~ 278 (279)
T 1thm_A 278 Q 278 (279)
T ss_dssp H
T ss_pred c
Confidence 5
No 14
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=6.5e-54 Score=486.82 Aligned_cols=322 Identities=18% Similarity=0.201 Sum_probs=48.5
Q ss_pred chHHHHHHHHHHhCCccccccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeecccCCCccccccchh---
Q 045363 12 AVKEHHSLLTTAIGDEKLARESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKLHTTRTWDFLGMSEK--- 88 (712)
Q Consensus 12 ~~~~h~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~~~~~s~~~~~~~~~--- 88 (712)
....|.++|...... .....++++.|+++|+||+++++++++++|+++|+|++|++++.+..+ ..+|.+..+...
T Consensus 90 ~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~~~ 167 (692)
T 2p4e_P 90 QSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPRYR 167 (692)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC----------------
T ss_pred HHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCCcchhhccccccc
Confidence 334455555443321 122468999999999999999999999999999999999999988653 345766555322
Q ss_pred -hhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCC
Q 045363 89 -LQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPV 167 (712)
Q Consensus 89 -~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 167 (712)
..|..+.+|+||+|+|||||||++||+|.+... |. +|+ .+ .+.. . ......+.
T Consensus 168 ~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~----------~~-~d~d-g-~~~~~~~~ 221 (692)
T 2p4e_P 168 ADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE----------NV-PEED-G-TRFHRQAS 221 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc----------cc-cCCC-C-CcccCCCC
Confidence 368888999999999999999999999986421 10 010 00 0000 0 00012456
Q ss_pred CCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC------CCcEEEe
Q 045363 168 DTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD------GVDLISI 240 (712)
Q Consensus 168 d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~dVIN~ 240 (712)
|.+||||||||||+|+. .||||+|+|+++|+++..| ++.+++++||+|++++ +++||||
T Consensus 222 D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINm 287 (692)
T 2p4e_P 222 KCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLL 287 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEe
Confidence 88999999999999874 7999999999999998876 7888999999999986 8999999
Q ss_pred ccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCC-ccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeee
Q 045363 241 SIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQG-TVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISIN 319 (712)
Q Consensus 241 S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~ 319 (712)
|||+.. ...+..++.++.++|++||+||||+|.+.. ..++..|++|+|||++.+...
T Consensus 288 SlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~------------------ 345 (692)
T 2p4e_P 288 PLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc------------------
Confidence 999753 344555666888999999999999997653 346778999999997643100
Q ss_pred cCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccce
Q 045363 320 TFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIAT 399 (712)
Q Consensus 320 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 399 (712)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccC
Q 045363 400 LIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASV 479 (712)
Q Consensus 400 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~ 479 (712)
...-+.||+|||. |||+|||++|+++++..
T Consensus 346 ---------------------------------------a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~--- 375 (692)
T 2p4e_P 346 ---------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDC--- 375 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------cccccccCCCCCc--------eeEEecCCcEEeeccCC---
Confidence 0011238999974 59999999999998741
Q ss_pred CCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCC
Q 045363 480 TGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMK 535 (712)
Q Consensus 480 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~ 535 (712)
...|..++|||||||||||++|||++++|+|+|++||++|++||.+..
T Consensus 376 --------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 376 --------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp --------------------------------------------------------
T ss_pred --------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 135899999999999999999999999999999999999999998753
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1e-51 Score=440.28 Aligned_cols=275 Identities=26% Similarity=0.388 Sum_probs=225.0
Q ss_pred cCCCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCC
Q 045363 76 TTRTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDN 155 (712)
Q Consensus 76 ~~~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~ 155 (712)
....|.+-.+++..+|+.+++|+||+|||||||||++||+|.+ ++...++| ..+
T Consensus 19 ~~~~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~-------------------------~~~~~~~~-~~~ 72 (327)
T 2x8j_A 19 SEVPMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE-------------------------RIIGGVNL-TTD 72 (327)
T ss_dssp BSCCHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG-------------------------GEEEEEEC-SSG
T ss_pred cccCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh-------------------------cccCCccc-cCC
Confidence 3457877777778999999999999999999999999999964 34556666 433
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHh--
Q 045363 156 ALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIG-- 232 (712)
Q Consensus 156 ~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~-- 232 (712)
+. .+.....|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+ ++.+++++||+||++
T Consensus 73 ~~---~~~~~~~d~~gHGT~VAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~ 140 (327)
T 2x8j_A 73 YG---GDETNFSDNNGHGTHVAGTVAAAE-TGS---G-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWR 140 (327)
T ss_dssp GG---GCTTCCCCSSSHHHHHHHHHHCCC-CSS---B-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCC
T ss_pred CC---CCCCCCCCCCCchHHHHHHHhccC-CCC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhc
Confidence 21 111235688999999999999984 221 1 28999999999999998776 778899999999999
Q ss_pred ----CCCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC-----CccccCCCceEEEceeccCceeEE
Q 045363 233 ----DGVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ-----GTVENVAPWIMTVAASSIDRKFVT 303 (712)
Q Consensus 233 ----~g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVga~~~~~~~~~ 303 (712)
.+++|||||||... ....+..++..+.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 141 ~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~----- 212 (327)
T 2x8j_A 141 GPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD----- 212 (327)
T ss_dssp CTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-----
T ss_pred ccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-----
Confidence 89999999999864 245677777888999999999999999652 4556777999999987532
Q ss_pred EEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCce
Q 045363 304 AVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGA 383 (712)
Q Consensus 304 ~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~ 383 (712)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEE
Q 045363 384 GTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIA 463 (712)
Q Consensus 384 g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 463 (712)
+.++.||++||.. ||+
T Consensus 213 --------------------------------------------------------~~~~~fS~~G~~~--------di~ 228 (327)
T 2x8j_A 213 --------------------------------------------------------LRLSDFTNTNEEI--------DIV 228 (327)
T ss_dssp --------------------------------------------------------CCBSCC---CCCC--------SEE
T ss_pred --------------------------------------------------------CCCCCccCCCCCc--------eEe
Confidence 3678999999854 999
Q ss_pred eCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHccccCCCCCC
Q 045363 464 APGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSF-----HPDWSPAAIKSALMTTATPMKTKS 538 (712)
Q Consensus 464 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~lsp~~ik~~L~~TA~~~~~~~ 538 (712)
|||.+|+++++. +.|..++|||||||+|||++|||+|+ +|.|++.+||++|++||+++..
T Consensus 229 APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-- 293 (327)
T 2x8j_A 229 APGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-- 293 (327)
T ss_dssp EECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS--
T ss_pred cCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC--
Confidence 999999999764 35899999999999999999999999 9999999999999999999864
Q ss_pred CCCCCCCCCCCcCccccCC
Q 045363 539 DDAELASGSGQINPTKAVH 557 (712)
Q Consensus 539 ~~~~~~~G~G~in~~~A~~ 557 (712)
++..+|+|+||+.+|++
T Consensus 294 --~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 294 --TAQAEGNGFLTLDLVER 310 (327)
T ss_dssp --CHHHHTTCEECTTHHHH
T ss_pred --CCCceeeeEECHHHHHH
Confidence 57789999999999988
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.3e-53 Score=457.55 Aligned_cols=305 Identities=19% Similarity=0.206 Sum_probs=198.1
Q ss_pred ccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCcccc-CCcee----EEeEeccCCCC
Q 045363 82 FLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTR-CNKKV----IGARYYNLDNA 156 (712)
Q Consensus 82 ~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~-~n~ki----~g~~~~~~~~~ 156 (712)
..|+. .+|+.+..|++|+|||||||||++||+|++....+....|+..++....... .+..+ .....+ ....
T Consensus 17 ipG~~--~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (357)
T 4h6x_A 17 IPGLA--DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEK-EEAL 93 (357)
T ss_dssp STTHH--HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHH-HHHH
T ss_pred ccCHH--HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccc-cccc
Confidence 33555 8999999999999999999999999999986655555666654432210000 00000 000000 0000
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC------CChHHHHHHHHHH
Q 045363 157 LDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG------CADMDILAAFDDA 230 (712)
Q Consensus 157 ~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~a 230 (712)
.....+...+.|.+||||||||||+|+.++ | +.||||+|+|+.+|++.... ....+++++|+||
T Consensus 94 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~-----g-----~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a 163 (357)
T 4h6x_A 94 EAVIPDTKDRIVLNDHACHVTSTIVGQEHS-----P-----VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLA 163 (357)
T ss_dssp HHHCTTTHHHHHHHHHHHHHHHHHHCCTTS-----S-----CCCSCTTSEEEEEECTTC----------CHHHHHHHHHH
T ss_pred ccccCCCCCCcCCCCcHHHHHHHHhccCCC-----C-----ceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHH
Confidence 000011123446779999999999997532 1 28999999999999975422 3456789999999
Q ss_pred HhCCCcEEEeccCCCC-CCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCC
Q 045363 231 IGDGVDLISISIGGPS-RSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGN 309 (712)
Q Consensus 231 ~~~g~dVIN~S~G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~ 309 (712)
++.|++|||||||... .....+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 164 ~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------- 232 (357)
T 4h6x_A 164 LELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD----------- 232 (357)
T ss_dssp HHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-----------
T ss_pred HHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-----------
Confidence 9999999999999863 2344567778888999999999999999998888888888999999986532
Q ss_pred CceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEe
Q 045363 310 GMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAV 389 (712)
Q Consensus 310 g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~ 389 (712)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcE
Q 045363 390 DAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDI 469 (712)
Q Consensus 390 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I 469 (712)
+.++.||+||+.. .||||+|||.+|
T Consensus 233 --------------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i 257 (357)
T 4h6x_A 233 --------------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEI 257 (357)
T ss_dssp --------------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSE
T ss_pred --------------------------------------------------CcccccccCCCCC-----CccceeecCCCe
Confidence 3678999999754 589999999999
Q ss_pred EeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHccccCCCCCCCCCCCCC
Q 045363 470 LAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSF----HPDWSPAAIKSALMTTATPMKTKSDDAELAS 545 (712)
Q Consensus 470 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~ 545 (712)
+++++.. ..|..++|||||||||||++|||+++ +|.|+++|||++|++||+++.......+.+|
T Consensus 258 ~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~~~~~~~~ 325 (357)
T 4h6x_A 258 LGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVVEEPERC 325 (357)
T ss_dssp EECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC--------------C
T ss_pred EeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCCCCCcccc
Confidence 9997641 34778999999999999999999964 5689999999999999999876533356789
Q ss_pred CCCCcCccccCC
Q 045363 546 GSGQINPTKAVH 557 (712)
Q Consensus 546 G~G~in~~~A~~ 557 (712)
|+|+||+.+|++
T Consensus 326 G~G~vn~~~A~~ 337 (357)
T 4h6x_A 326 LRGFVNIPGAMK 337 (357)
T ss_dssp TTCBCCHHHHHH
T ss_pred eeEEecHHHHHH
Confidence 999999999987
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3e-50 Score=427.14 Aligned_cols=289 Identities=27% Similarity=0.349 Sum_probs=230.1
Q ss_pred cCCCccccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCC
Q 045363 76 TTRTWDFLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDN 155 (712)
Q Consensus 76 ~~~s~~~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~ 155 (712)
...+|.+..+.+..+|+.+++|+||+|+|||||||++||+|.+. +...++| ...
T Consensus 4 ~~~~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~-------------------------~~~~~~~-~~~ 57 (310)
T 2ixt_A 4 QQIPWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN-------------------------VEQCKDF-TGA 57 (310)
T ss_dssp CSSCHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT-------------------------EEEEEES-SSS
T ss_pred ccCCCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc-------------------------ccccccc-cCC
Confidence 44678777777779999999999999999999999999999642 4455566 332
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhCC
Q 045363 156 ALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGDG 234 (712)
Q Consensus 156 ~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g 234 (712)
.. .......|..+|||||||||+|...++. ..+.||||+|+|+.+|+++..+ ++.+++++||+||++++
T Consensus 58 ~~---~~~~~~~d~~gHGT~vAgiia~~~~~n~-------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~ 127 (310)
T 2ixt_A 58 TT---PINNSCTDRNGHGTHVAGTALADGGSDQ-------AGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQA 127 (310)
T ss_dssp SS---CEETCCCCSSSHHHHHHHHHHCBCCTTS-------CSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHH
T ss_pred CC---CCCCCCCCCCCCHHHHHHHHhccCCCCC-------CceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhh
Confidence 10 1112346789999999999999852210 1128999999999999998766 67889999999999998
Q ss_pred C-----cEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCC--CCccccCCCceEEEceeccCceeEEEEEe
Q 045363 235 V-----DLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPY--QGTVENVAPWIMTVAASSIDRKFVTAVKL 307 (712)
Q Consensus 235 ~-----dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVga~~~~~~~~~~~~~ 307 (712)
+ +|||||||... ....+..++.++.++|++||+||||+|.. ....+...|++|+|||++....
T Consensus 128 ~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~------- 197 (310)
T 2ixt_A 128 TATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ------- 197 (310)
T ss_dssp HHHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE-------
T ss_pred hccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc-------
Confidence 8 99999999864 24566777778899999999999999976 3456677899999998752100
Q ss_pred CCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEE
Q 045363 308 GNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIV 387 (712)
Q Consensus 308 ~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~ 387 (712)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCC----CCcccCcEE
Q 045363 388 AVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKIT----LNILKPDIA 463 (712)
Q Consensus 388 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~----~~~lKPDI~ 463 (712)
.....++.||++||.... ..+.||||+
T Consensus 198 -------------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ 228 (310)
T 2ixt_A 198 -------------------------------------------------NGTYRVADYSSRGYISTAGDYVIQEGDIEIS 228 (310)
T ss_dssp -------------------------------------------------TTEEEECTTSCCCCTTTTTSSSCCTTCCCEE
T ss_pred -------------------------------------------------CCCeeeccccCCCCccCCccccccCCCeeEE
Confidence 000157889999985311 134599999
Q ss_pred eCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCC-----C
Q 045363 464 APGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTK-----S 538 (712)
Q Consensus 464 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~-----~ 538 (712)
|||.+|+++++. ..|..++|||||||||||++|||+|++|+|++++||++|++||++.+.. .
T Consensus 229 ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~ 295 (310)
T 2ixt_A 229 APGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAA 295 (310)
T ss_dssp EECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCC
T ss_pred CCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccc
Confidence 999999999764 3599999999999999999999999999999999999999999998743 2
Q ss_pred CCCCCCCCCCCcCc
Q 045363 539 DDAELASGSGQINP 552 (712)
Q Consensus 539 ~~~~~~~G~G~in~ 552 (712)
+.++..+|||++|+
T Consensus 296 ~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 296 IGDDYASGFGFARV 309 (310)
T ss_dssp SSSBTTTBTCBCCC
T ss_pred cCCccccccceeec
Confidence 44788999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=9.3e-51 Score=425.09 Aligned_cols=264 Identities=23% Similarity=0.268 Sum_probs=210.4
Q ss_pred CCCC-CCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCCCCCCC
Q 045363 94 SKAQ-SNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPVDTDGH 172 (712)
Q Consensus 94 ~~~G-~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~d~~gH 172 (712)
.++| +||+|||||||||++||+|.+.. +..+++.... ......|.+||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~-------------------------~~~~~~~~~~------~~~~d~~~~gH 51 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD-------------------------LTVLPTLAPT------AARSDGFMSAH 51 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE-------------------------EEECCCSSCC------CCCTTCHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe-------------------------eecCcCCCCC------CCCCCCCCCCc
Confidence 4678 79999999999999999997531 1112220111 11222345789
Q ss_pred hhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC--CChHHHHHHHHHHHhCCCcEEEeccCCCC-CCC
Q 045363 173 GTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG--CADMDILAAFDDAIGDGVDLISISIGGPS-RSY 249 (712)
Q Consensus 173 GThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~S~G~~~-~~~ 249 (712)
||||||||+|+.++ | +.||||+|+|+.+|++.+.+ .+..+++++|+||++++++|||||||... ...
T Consensus 52 GT~VAGiiag~~~~-----~-----~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~ 121 (282)
T 3zxy_A 52 GTHVASIIFGQPET-----S-----VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGE 121 (282)
T ss_dssp HHHHHHHHHCCTTS-----S-----SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSC
T ss_pred ccceeehhhccCCc-----e-----eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcccccccc
Confidence 99999999997532 1 28999999999999986543 67788999999999999999999999763 223
Q ss_pred ccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecCCCCCceee
Q 045363 250 FDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTFSPRKAMYP 329 (712)
Q Consensus 250 ~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 329 (712)
....+..++..+.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 122 ~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 170 (282)
T 3zxy_A 122 ADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------------------- 170 (282)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------------------
T ss_pred ccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------------------
Confidence 4556777888899999999999999998888888889999999986532
Q ss_pred eEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceeeeEEEeChh
Q 045363 330 LTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAGTFVVPE 409 (712)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~ 409 (712)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCcc
Q 045363 410 VGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIV 489 (712)
Q Consensus 410 ~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~ 489 (712)
+.++.||+||+.. .||||+|||.+|+++++. +
T Consensus 171 ------------------------------~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~-------------~ 202 (282)
T 3zxy_A 171 ------------------------------GHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG-------------G 202 (282)
T ss_dssp ------------------------------SCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT-------------S
T ss_pred ------------------------------CccccccCCCCCc-----cccceeccCcceeeecCC-------------C
Confidence 3678899998653 688999999999999874 3
Q ss_pred ceEeeecccchhHHHHHHHHHHHhhC----CCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccCC
Q 045363 490 PFNILSGTSMACPHAAAAAAYVKSFH----PDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTKAVH 557 (712)
Q Consensus 490 ~y~~~sGTSmAaP~VAG~aALl~~~~----P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~~ 557 (712)
.|..++|||||||||||++|||++++ |.++|++||++|++||++++...+.....+|+|+||+.+|++
T Consensus 203 ~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 203 GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-------CGGGTTCBCCHHHHHH
T ss_pred ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCCCCccCceeeeEeCHHHHHH
Confidence 59999999999999999999999874 789999999999999998876544466789999999999987
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.6e-50 Score=430.55 Aligned_cols=275 Identities=28% Similarity=0.409 Sum_probs=227.2
Q ss_pred CCCccccccchhhhccCCCCCC--CcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCC
Q 045363 77 TRTWDFLGMSEKLQKRSSKAQS--NIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLD 154 (712)
Q Consensus 77 ~~s~~~~~~~~~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~ 154 (712)
..+|.+..+++..+|+.+ +|+ ||+|||||||||++||+|.+ ++...++| ..
T Consensus 7 ~~~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~-------------------------~~~~~~~~-~~ 59 (320)
T 2z30_A 7 TIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA-------------------------NIAWCVST-LR 59 (320)
T ss_dssp CCCHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG-------------------------GEEEEEEC-GG
T ss_pred CCCCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc-------------------------ccccCccc-cC
Confidence 457877777778999998 999 99999999999999999964 23444555 32
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC
Q 045363 155 NALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD 233 (712)
Q Consensus 155 ~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~ 233 (712)
+.. ........|..+|||||||||+|.. ++. | +.||||+|+|+.+|+++..+ ++.++++++|+||++.
T Consensus 60 ~~~--~~~~~~~~d~~gHGT~vAgiia~~~-n~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~ 128 (320)
T 2z30_A 60 GKV--STKLRDCADQNGHGTHVIGTIAALN-NDI---G-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILG 128 (320)
T ss_dssp GCC--BCCHHHHBCSSSHHHHHHHHHHCCS-SSB---S-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHT
T ss_pred Ccc--CCCCCCCCCCCCCHHHHHHHHHccc-CCC---c-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhC
Confidence 210 0001123578999999999999973 221 1 28999999999999998776 6788999999999987
Q ss_pred --------------------CCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEc
Q 045363 234 --------------------GVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVA 293 (712)
Q Consensus 234 --------------------g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVg 293 (712)
+++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+||
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vg 205 (320)
T 2z30_A 129 PDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVG 205 (320)
T ss_dssp TTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEE
T ss_pred cccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEE
Confidence 9999999999864 24566677778899999999999999988778888899999999
Q ss_pred eeccCceeEEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCch
Q 045363 294 ASSIDRKFVTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQ 373 (712)
Q Consensus 294 a~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~ 373 (712)
|++.+
T Consensus 206 a~~~~--------------------------------------------------------------------------- 210 (320)
T 2z30_A 206 AIDSN--------------------------------------------------------------------------- 210 (320)
T ss_dssp EECTT---------------------------------------------------------------------------
T ss_pred eeCCC---------------------------------------------------------------------------
Confidence 87532
Q ss_pred hHHhhccCceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcC
Q 045363 374 DYTIDRLQGAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKI 453 (712)
Q Consensus 374 ~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~ 453 (712)
+.++.||++||
T Consensus 211 ------------------------------------------------------------------~~~~~~S~~g~--- 221 (320)
T 2z30_A 211 ------------------------------------------------------------------DNIASFSNRQP--- 221 (320)
T ss_dssp ------------------------------------------------------------------SCBCTTSCSSC---
T ss_pred ------------------------------------------------------------------CCcCcccCCCC---
Confidence 36788999986
Q ss_pred CCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhC-------------CCCCH
Q 045363 454 TLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFH-------------PDWSP 520 (712)
Q Consensus 454 ~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~-------------P~lsp 520 (712)
+|+|||.+|+++++. ..|..++|||||||||||++|||+|++ |+|++
T Consensus 222 -------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~ 281 (320)
T 2z30_A 222 -------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISK 281 (320)
T ss_dssp -------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCST
T ss_pred -------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCH
Confidence 789999999999864 358999999999999999999999998 99999
Q ss_pred HHHHHHHHccccCCCCCCCCCCCCCCCCCcCccccCCC
Q 045363 521 AAIKSALMTTATPMKTKSDDAELASGSGQINPTKAVHP 558 (712)
Q Consensus 521 ~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~A~~~ 558 (712)
.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 282 ~~v~~~L~~ta~~~~~~--g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 282 NTVRGILHITADDLGPT--GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp TSHHHHHHHHSBCCSSS--SSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHhhCccCCCC--CCCCCcCCceeCHHHHHHH
Confidence 99999999999988652 2577899999999999873
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.1e-50 Score=437.23 Aligned_cols=281 Identities=21% Similarity=0.184 Sum_probs=227.0
Q ss_pred CCCccccccchhhhccCCCCCC--CcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCC
Q 045363 77 TRTWDFLGMSEKLQKRSSKAQS--NIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLD 154 (712)
Q Consensus 77 ~~s~~~~~~~~~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~ 154 (712)
..+|.+..++...+|+. .+|+ ||+||||||||| +||+|.+ ++...++|+.+
T Consensus 22 ~~~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~-------------------------~~~~~~~~~~~ 74 (347)
T 2iy9_A 22 EKPWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD-------------------------SEFAKFSFTQD 74 (347)
T ss_dssp -CCHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT-------------------------CEEEEEECBTT
T ss_pred ccCcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc-------------------------CcccCCcccCC
Confidence 45677766666799998 8999 999999999999 9999964 24455666233
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHhC-
Q 045363 155 NALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIGD- 233 (712)
Q Consensus 155 ~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~- 233 (712)
+. +.....+.|..+|||||||||+|+. |. .||||+|+|+.+|+++..+.. ++++||+||+++
T Consensus 75 ~~---~~~~~~~~d~~gHGT~vAgiia~~~-------g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~ 137 (347)
T 2iy9_A 75 GS---PFPVKKSEALYIHGTAMASLIASRY-------GI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNV 137 (347)
T ss_dssp CC---SSCCSSSHHHHHHHHHHHHHHHCSS-------SS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCT
T ss_pred CC---CCCCCCCCCCCCcHHHHHHHHhccc-------CC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhh
Confidence 21 1111245668899999999999871 22 899999999999999775533 999999999999
Q ss_pred -----CCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCC-------CCccccCCC----------ceEE
Q 045363 234 -----GVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPY-------QGTVENVAP----------WIMT 291 (712)
Q Consensus 234 -----g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~vit 291 (712)
+++|||||||..........+..++..+.++|++||+||||+|.. ...++...+ ++|+
T Consensus 138 ~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~ 217 (347)
T 2iy9_A 138 FLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIR 217 (347)
T ss_dssp TSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEE
T ss_pred hcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEE
Confidence 999999999976434456778888889999999999999999975 345667778 9999
Q ss_pred Eceecc--CceeEEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEec
Q 045363 292 VAASSI--DRKFVTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLG 369 (712)
Q Consensus 292 Vga~~~--~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~ 369 (712)
|||++. +...
T Consensus 218 Vga~~~~~~g~~-------------------------------------------------------------------- 229 (347)
T 2iy9_A 218 VAALAQYRKGET-------------------------------------------------------------------- 229 (347)
T ss_dssp EEEECCCCTTSC--------------------------------------------------------------------
T ss_pred EEEcccCCCCce--------------------------------------------------------------------
Confidence 999764 2100
Q ss_pred CCchhHHhhccCceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCC
Q 045363 370 SGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRG 449 (712)
Q Consensus 370 ~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~G 449 (712)
. .....++.||++|
T Consensus 230 ------~------------------------------------------------------------~~~~~~~~fS~~G 243 (347)
T 2iy9_A 230 ------P------------------------------------------------------------VLHGGGITGSRFG 243 (347)
T ss_dssp ------C------------------------------------------------------------CBCCCSSSCBCBC
T ss_pred ------e------------------------------------------------------------cccCCCCCCCCCC
Confidence 0 0012467999999
Q ss_pred CCcCCCCcccCcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHc
Q 045363 450 PQKITLNILKPDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMT 529 (712)
Q Consensus 450 p~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~ 529 (712)
|+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++
T Consensus 244 ~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~ 303 (347)
T 2iy9_A 244 NN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLE 303 (347)
T ss_dssp TT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred CC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 84 67999999999999874 35999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCcCccccCCC
Q 045363 530 TATPMKTKSDDAELASGSGQINPTKAVHP 558 (712)
Q Consensus 530 TA~~~~~~~~~~~~~~G~G~in~~~A~~~ 558 (712)
||+++... .+..+|+|+||+.+|++.
T Consensus 304 tA~~~~~~---~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 304 SADKYPSL---VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HSEECGGG---TTTSGGGEECCHHHHHHH
T ss_pred hCccCCCC---CCccccCCEecHHHHHHH
Confidence 99998764 347899999999999984
No 21
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=8.8e-50 Score=429.16 Aligned_cols=307 Identities=24% Similarity=0.323 Sum_probs=228.1
Q ss_pred CCcccc---ccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCcccc---CCceeEEeEec
Q 045363 78 RTWDFL---GMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTR---CNKKVIGARYY 151 (712)
Q Consensus 78 ~s~~~~---~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~---~n~ki~g~~~~ 151 (712)
.+|.+. ++++..+|+.+++|+||+||||||||+ +||+|.+.... .|+-.......+.. .........++
T Consensus 9 ~qW~l~~~~~i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 83 (340)
T 3lpc_A 9 EQWHYFDRYGVKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWF 83 (340)
T ss_dssp GCHHHHSTTSCCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCB
T ss_pred hccCCCCcCCCCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCcccccccc
Confidence 456653 366679999999999999999999998 99999754211 01000000000000 00000000000
Q ss_pred cCC-CCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHH
Q 045363 152 NLD-NALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDA 230 (712)
Q Consensus 152 ~~~-~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a 230 (712)
.. .....+.+.....|..||||||||||+|...++.++ .||||+|+|+.+|+++..++...+++++|+||
T Consensus 84 -~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g~--------~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a 154 (340)
T 3lpc_A 84 -DNWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIGV--------AGVAYGAKVVPVRALGRCGGYDSDISDGLYWA 154 (340)
T ss_dssp -CTTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSSC--------CCTTTTSEEEEEECCBTTBCCHHHHHHHHHHH
T ss_pred -ccccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCcc--------eeecCCCEEEEEEEecCCCCcHHHHHHHHHHH
Confidence 00 000001122345788999999999999987654332 89999999999999988778889999999999
Q ss_pred Hh----------CCCcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCC-ccccCCCceEEEceeccCc
Q 045363 231 IG----------DGVDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQG-TVENVAPWIMTVAASSIDR 299 (712)
Q Consensus 231 ~~----------~g~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~ 299 (712)
++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 155 ~~~~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~- 231 (340)
T 3lpc_A 155 AGGRIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR- 231 (340)
T ss_dssp HTCCCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT-
T ss_pred hcccccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC-
Confidence 98 89999999999763 23455667777889999999999999987643 456778999999986532
Q ss_pred eeEEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhc
Q 045363 300 KFVTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDR 379 (712)
Q Consensus 300 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~ 379 (712)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCccc
Q 045363 380 LQGAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILK 459 (712)
Q Consensus 380 ~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lK 459 (712)
+.++.||++|| |
T Consensus 232 ------------------------------------------------------------~~~~~~S~~g~--------~ 243 (340)
T 3lpc_A 232 ------------------------------------------------------------GIRASFSNYGV--------D 243 (340)
T ss_dssp ------------------------------------------------------------SSBCTTCCBST--------T
T ss_pred ------------------------------------------------------------CCcCCCCCCCC--------C
Confidence 36789999997 4
Q ss_pred CcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHHccccCCC
Q 045363 460 PDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSF-H---PDWSPAAIKSALMTTATPMK 535 (712)
Q Consensus 460 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~lsp~~ik~~L~~TA~~~~ 535 (712)
|||+|||.+|+++++.... ......|..++|||||||||||++|||+|+ + |+|++++||++|++||+++.
T Consensus 244 ~di~ApG~~i~s~~~~~~~------~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~ 317 (340)
T 3lpc_A 244 VDLAAPGQDILSTVDSGTR------RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN 317 (340)
T ss_dssp CCEEEECSSEEEEEESCSS------SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS
T ss_pred ceEEecCCCeecccCCCCc------CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC
Confidence 5999999999999875211 111245999999999999999999999998 5 99999999999999999986
Q ss_pred CCCCCCCCCCCCCCcCccccCCC
Q 045363 536 TKSDDAELASGSGQINPTKAVHP 558 (712)
Q Consensus 536 ~~~~~~~~~~G~G~in~~~A~~~ 558 (712)
.. .+..+|||+||+.+|++.
T Consensus 318 ~~---~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 318 GR---LDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp SC---CSSCCCSSBCCHHHHHHH
T ss_pred CC---CCCCcccceecHHHHHHH
Confidence 54 677899999999999874
No 22
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.1e-50 Score=426.42 Aligned_cols=274 Identities=25% Similarity=0.300 Sum_probs=221.2
Q ss_pred ccccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCC
Q 045363 82 FLGMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNT 161 (712)
Q Consensus 82 ~~~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~ 161 (712)
+.|++ ++|+.+..++||+|||||||||++||+|.+. .+....+| ..+.
T Consensus 7 i~G~~--~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~------------------------~~~~~~~~-~~~~----- 54 (306)
T 4h6w_A 7 IPGLK--KLWSETRGDPKICVAVLDGIVDQNHPCFIGA------------------------DLTRLPSL-VSGE----- 54 (306)
T ss_dssp CTTHH--HHHHHCSCCTTCEEEEESSCCCTTSGGGTTC------------------------EEEECC------------
T ss_pred CcCHH--HHHhhhCCCCCCEEEEEcCCCCCCChhHcCC------------------------cccCCCcc-cCCC-----
Confidence 34565 8999988789999999999999999999753 22222233 2221
Q ss_pred CCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC--CChHHHHHHHHHHHhCCCcEEE
Q 045363 162 DQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG--CADMDILAAFDDAIGDGVDLIS 239 (712)
Q Consensus 162 ~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN 239 (712)
.....|..+|||||||||+|+.++ .+.||||+|+|+.+|++.+.+ ....++++||+||++++++|||
T Consensus 55 -~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~ 123 (306)
T 4h6w_A 55 -ANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIIN 123 (306)
T ss_dssp -----CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred -CCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeee
Confidence 123446789999999999997532 128999999999999986543 6778899999999999999999
Q ss_pred eccCCCC-CCCccchHHHHHHHhhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEeeeee
Q 045363 240 ISIGGPS-RSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISI 318 (712)
Q Consensus 240 ~S~G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~ 318 (712)
+|||... .......+..++..+.++|+++|+||||+|......+...+++|+|||++..
T Consensus 124 ~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~-------------------- 183 (306)
T 4h6w_A 124 VSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ-------------------- 183 (306)
T ss_dssp ECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT--------------------
T ss_pred ccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC--------------------
Confidence 9999752 2334566777888999999999999999998887788888999999986532
Q ss_pred ecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccc
Q 045363 319 NTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIA 398 (712)
Q Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~ 398 (712)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCcc
Q 045363 399 TLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELAS 478 (712)
Q Consensus 399 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~ 478 (712)
+.++.||++|+.. .||||+|||.+|+++.+.
T Consensus 184 -----------------------------------------~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~--- 214 (306)
T 4h6w_A 184 -----------------------------------------GKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN--- 214 (306)
T ss_dssp -----------------------------------------SCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT---
T ss_pred -----------------------------------------CCccccccccCCc-----CcceeecCCcCcccccCC---
Confidence 3567889998653 688999999999999874
Q ss_pred CCCCCCCCCccceEeeecccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCCcCccc
Q 045363 479 VTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSF----HPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQINPTK 554 (712)
Q Consensus 479 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~in~~~ 554 (712)
+.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++..........||+|+||+.+
T Consensus 215 ----------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~ 284 (306)
T 4h6w_A 215 ----------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDTDDQSRCLMGKLNILD 284 (306)
T ss_dssp ----------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTCSCGGGGTTCBCCHHH
T ss_pred ----------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCCCCCCCcceeecCHHH
Confidence 35999999999999999999999864 6999999999999999999876544455679999999999
Q ss_pred cCC
Q 045363 555 AVH 557 (712)
Q Consensus 555 A~~ 557 (712)
|++
T Consensus 285 Av~ 287 (306)
T 4h6w_A 285 AIE 287 (306)
T ss_dssp HHH
T ss_pred HHH
Confidence 997
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=5e-49 Score=436.61 Aligned_cols=296 Identities=25% Similarity=0.331 Sum_probs=227.9
Q ss_pred cccccchhhhcc-CCCCCCCcEEEEEcCCCCC------CCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccC
Q 045363 81 DFLGMSEKLQKR-SSKAQSNIIVGLLDTGIWV------ESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNL 153 (712)
Q Consensus 81 ~~~~~~~~~~~~-~~~~G~gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~ 153 (712)
+.++++ .+|+ .+++|+||+|||||||||. .||+|.+ ++...++| .
T Consensus 6 ~~i~~~--~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~-------------------------~i~~~~~~-~ 57 (434)
T 1wmd_A 6 GIVKAD--VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG-------------------------KITALYAL-G 57 (434)
T ss_dssp HHTTHH--HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT-------------------------CEEEEEET-T
T ss_pred hhhCch--hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC-------------------------CEeeeccc-c
Confidence 445554 8998 7999999999999999999 7999964 34555666 4
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCC---ChHHHHHHHHHH
Q 045363 154 DNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGC---ADMDILAAFDDA 230 (712)
Q Consensus 154 ~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~a 230 (712)
+. ..+.|..||||||||||+|+.. + +.||||+|+|+++|+++..+. ...++.++|++|
T Consensus 58 ~~--------~~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a 118 (434)
T 1wmd_A 58 RT--------NNANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQA 118 (434)
T ss_dssp TT--------TCCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHH
T ss_pred CC--------CCCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHH
Confidence 32 2567889999999999998642 1 279999999999999987663 456899999999
Q ss_pred HhCCCcEEEeccCCCCCCCccchHHHHHHHh-hhcCceEEEecCCCCCCC--CccccCCCceEEEceeccCceeEEEEEe
Q 045363 231 IGDGVDLISISIGGPSRSYFDDSISIGSFHA-MKKGILTACSAGNDGPYQ--GTVENVAPWIMTVAASSIDRKFVTAVKL 307 (712)
Q Consensus 231 ~~~g~dVIN~S~G~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVga~~~~~~~~~~~~~ 307 (712)
+++|++|||||||......+ +....++.++ .++|++||+||||+|... ...+..++++|+|||++..+...
T Consensus 119 ~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~----- 192 (434)
T 1wmd_A 119 YSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF----- 192 (434)
T ss_dssp HHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-----
T ss_pred HhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-----
Confidence 99999999999998742212 2333344444 588999999999999764 34567789999999986432000
Q ss_pred CCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEE
Q 045363 308 GNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIV 387 (712)
Q Consensus 308 ~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~ 387 (712)
. ..
T Consensus 193 -------------------------~------------------------------------------~~---------- 195 (434)
T 1wmd_A 193 -------------------------G------------------------------------------SY---------- 195 (434)
T ss_dssp -------------------------C------------------------------------------GG----------
T ss_pred -------------------------C------------------------------------------cc----------
Confidence 0 00
Q ss_pred EecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCC
Q 045363 388 AVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGL 467 (712)
Q Consensus 388 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 467 (712)
....+.++.||++||+. ++++||||+|||+
T Consensus 196 ------------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~ 225 (434)
T 1wmd_A 196 ------------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGT 225 (434)
T ss_dssp ------------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECS
T ss_pred ------------------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCCC
Confidence 01234789999999998 9999999999999
Q ss_pred cEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHccccCCCCCCCCCC
Q 045363 468 DILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDW-----SPAAIKSALMTTATPMKTKSDDAE 542 (712)
Q Consensus 468 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~l-----sp~~ik~~L~~TA~~~~~~~~~~~ 542 (712)
+|+++.+......... ......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ...+
T Consensus 226 ~i~s~~~~~~~~~~~~-~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~--~~~~ 302 (434)
T 1wmd_A 226 FILSARSSLAPDSSFW-ANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL--GYPN 302 (434)
T ss_dssp SEEEECCTTCCGGGSS-EEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS--CSSC
T ss_pred CeEecCCCCCCCcccc-cCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC--CCCC
Confidence 9999986421100000 0013469999999999999999999999998875 899999999999998643 2367
Q ss_pred CCCCCCCcCccccCCCC
Q 045363 543 LASGSGQINPTKAVHPG 559 (712)
Q Consensus 543 ~~~G~G~in~~~A~~~~ 559 (712)
..||||++|+.+|++..
T Consensus 303 ~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 303 GNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTTTCBCCHHHHHTCE
T ss_pred ccCCcCeEeHHHhcccc
Confidence 88999999999999754
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.7e-48 Score=462.80 Aligned_cols=357 Identities=24% Similarity=0.232 Sum_probs=249.7
Q ss_pred CCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC---CChHHHHHHHHHHHh-----CCCcEE
Q 045363 167 VDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG---CADMDILAAFDDAIG-----DGVDLI 238 (712)
Q Consensus 167 ~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 238 (712)
.|.+||||||||||||.. ++.+ +.||||+|+|+.+|+++..+ .+..+++++|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~g--------~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSRD--------VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSSS--------SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCCC--------ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478899999999999986 3322 28999999999999997643 255678888888887 799999
Q ss_pred EeccCCCCCCCccchHHHHHHHhh-hcCceEEEecCCCCCCCCc--ccc--CCCceEEEceeccCceeEEEEEeCCCceE
Q 045363 239 SISIGGPSRSYFDDSISIGSFHAM-KKGILTACSAGNDGPYQGT--VEN--VAPWIMTVAASSIDRKFVTAVKLGNGMRT 313 (712)
Q Consensus 239 N~S~G~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~vitVga~~~~~~~~~~~~~~~g~~~ 313 (712)
|||||........+.+..++.++. ++|++||+||||+|+...+ .++ ..+++|+|||++...........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 999999753334556666777775 8999999999999976443 445 37999999998644211000000
Q ss_pred eeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCC
Q 045363 314 SGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPT 393 (712)
Q Consensus 314 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 393 (712)
..
T Consensus 412 --------------------------------------------------------------~~---------------- 413 (1354)
T 3lxu_X 412 --------------------------------------------------------------RE---------------- 413 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------cc----------------
Confidence 00
Q ss_pred CcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeee
Q 045363 394 DIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAY 473 (712)
Q Consensus 394 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 473 (712)
...+.++.|||+||+. ++++||||+|||++|+++.
T Consensus 414 -------------------------------------------~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~ 448 (1354)
T 3lxu_X 414 -------------------------------------------KLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVP 448 (1354)
T ss_dssp -----------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC-------
T ss_pred -------------------------------------------CCCCccccccCCCCCc--cCCCcceEEecCceEEEee
Confidence 1124789999999998 9999999999999999875
Q ss_pred cCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHccccCCCCCCCCCCCCCCCCC
Q 045363 474 SELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKS----FHPDWSPAAIKSALMTTATPMKTKSDDAELASGSGQ 549 (712)
Q Consensus 474 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~G~G~ 549 (712)
.. ..+.|..++|||||||||||++|||++ .+|+|++.+||++|++||+++... .++.||||+
T Consensus 449 ~~-----------~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~---~~~~~G~Gl 514 (1354)
T 3lxu_X 449 QF-----------TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV---DPFAQGHGL 514 (1354)
T ss_dssp -------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS---CTTTSSSSB
T ss_pred cC-----------CCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC---CcccccCCE
Confidence 42 124589999999999999999999986 799999999999999999998764 567899999
Q ss_pred cCccccCCCCeeeecCcchhhhhhccCCCC-ccceeeecccccccccCCCCCCCCCCCCCCCceeeeecCCCceeEEEEE
Q 045363 550 INPTKAVHPGLIYDLNLSSYTRFLCKEGYN-STAIGRLIGRKKKLNCSTIRPAQGLDGLNYPSMHFHFTNESSISAIFRR 628 (712)
Q Consensus 550 in~~~A~~~~lv~~~~~~dy~~~lc~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~r 628 (712)
||+.+|++..+.++..+.+|+.|+|..+.. ...|.+-.. .+ . +....++++
T Consensus 515 LDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~~-----~~----------------------~-~~~~~tv~V 566 (1354)
T 3lxu_X 515 LNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQG-----VQ----------------------R-NSIDYNVYI 566 (1354)
T ss_dssp CCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECSS-----CC----------------------C-SCEEEEEEE
T ss_pred eCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEecc-----cc----------------------C-CceEEEEEE
Confidence 999999999999999999999999998763 322221110 00 0 111222222
Q ss_pred --EEEEcC---CC-CeeE--EEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEEEEc-----CC
Q 045363 629 --TVTNVG---FA-KSLY--KATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLEWSD-----TK 695 (712)
Q Consensus 629 --tv~n~~---~~-~~ty--~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~~-----~~ 695 (712)
++.|.. .. ...| ++.+.... --|++ |..|.+ .++.++|.|.|+.+... .+.+++.|..-| ..
T Consensus 567 ~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~~-p~~l~l--~~~~r~~~v~vDp~~L~-~G~h~~~v~~~D~~~~~~g 641 (1354)
T 3lxu_X 567 EPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQC-GAFLDL--SYGTRSIAVRVDPTGLQ-PGVHSAVIRAYDTDCVQKG 641 (1354)
T ss_dssp EEEESSCSCSSSTTCSCCCCEEEEEESS-TTEEE-CSCEEC--TTSCEEEEEEECGGGCC-SEEEEEEEEEEESSCTTSC
T ss_pred eeeecCcccCChhhccceEEEEEEecCC-Cceec-ccceee--cCCCceEEEEECCCCCC-CcceeEEEEEEEcCCcccC
Confidence 332211 11 1112 22222211 12333 777777 57889999999999865 678999998765 34
Q ss_pred cEEEeeEEEEecC
Q 045363 696 HSVKSPILVYKQF 708 (712)
Q Consensus 696 ~~v~~P~~~~~~~ 708 (712)
...|+|+.|....
T Consensus 642 p~f~ipvTv~~P~ 654 (1354)
T 3lxu_X 642 SLFEIPVTVVQPH 654 (1354)
T ss_dssp CSEEEEEEEEECB
T ss_pred ceEEeeEEEEeee
Confidence 7899999987654
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.3e-47 Score=400.34 Aligned_cols=236 Identities=24% Similarity=0.341 Sum_probs=202.0
Q ss_pred hhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCC
Q 045363 88 KLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPV 167 (712)
Q Consensus 88 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 167 (712)
..+|..+++|+||+|+|||||||++||+|.+ ++...++| .++. ..+.
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~-------------------------~~~~~~~~-~~~~-------~~~~ 65 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGG-------------------------RSVSGYDF-VDND-------ADSS 65 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTT-------------------------CEEEEEET-TTTB-------SCCC
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcC-------------------------Cccccccc-cCCC-------CCCC
Confidence 3689999999999999999999999999964 24455666 3321 2466
Q ss_pred CCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC--CCcEEEeccCC
Q 045363 168 DTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD--GVDLISISIGG 244 (712)
Q Consensus 168 d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dVIN~S~G~ 244 (712)
|..+|||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|++++ +++|||||||.
T Consensus 66 d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~ 131 (284)
T 1sh7_A 66 DCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGG 131 (284)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCB
T ss_pred CCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCC
Confidence 88999999999999873 6999999999999998766 6788999999999984 79999999998
Q ss_pred CCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC-CccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecCCC
Q 045363 245 PSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ-GTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTFSP 323 (712)
Q Consensus 245 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 323 (712)
.. ...+..++.++.++|++||+||||+|... ...+...|++|+|||++.+
T Consensus 132 ~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 182 (284)
T 1sh7_A 132 GQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS------------------------- 182 (284)
T ss_dssp SC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-------------------------
T ss_pred CC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-------------------------
Confidence 63 45677777788999999999999998754 3456778999999986532
Q ss_pred CCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceeeeE
Q 045363 324 RKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAG 403 (712)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 403 (712)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCC
Q 045363 404 TFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLP 483 (712)
Q Consensus 404 ~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 483 (712)
+.++.||++||.. ||+|||.+|+++++.
T Consensus 183 ------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~-------- 210 (284)
T 1sh7_A 183 ------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYD-------- 210 (284)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT--------
T ss_pred ------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCC--------
Confidence 3678999999976 999999999998764
Q ss_pred CCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCC
Q 045363 484 GDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKT 536 (712)
Q Consensus 484 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~ 536 (712)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++...
T Consensus 211 -----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 211 -----GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp -----SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred -----CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 358999999999999999999999999999999999999999998765
No 26
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2.3e-47 Score=439.18 Aligned_cols=291 Identities=21% Similarity=0.194 Sum_probs=203.3
Q ss_pred cchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCC
Q 045363 85 MSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQK 164 (712)
Q Consensus 85 ~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~ 164 (712)
++...+|..+++|+||+|||||||||++||+|.+.. ..+.++| ..+. ...
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~------------------------~~~~~~~-~~~~-----~d~ 106 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV------------------------RPGSKNV-VTGS-----DDP 106 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB------------------------CSCCBCT-TTCS-----SCC
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc------------------------ccCceec-cCCC-----CCC
Confidence 345689999999999999999999999999997531 1122333 3221 112
Q ss_pred CCCC-CCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCCh--HHHHHHHHHHHhCCCcEEEec
Q 045363 165 SPVD-TDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCAD--MDILAAFDDAIGDGVDLISIS 241 (712)
Q Consensus 165 ~~~d-~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~a~~~g~dVIN~S 241 (712)
.+.| ..||||||||||||. .++.+. .||||+|+|+.+|+++..+... ..+++....+..++++|||||
T Consensus 107 ~p~d~~~gHGT~vAGiiaa~-~n~~g~--------~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S 177 (600)
T 2oxa_A 107 TPTDPDTGHGTSVSGIIAAV-DNAIGT--------KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHS 177 (600)
T ss_dssp CCCSTTCCHHHHHHHHHHCC-SSSSSC--------CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEEC
T ss_pred CCCCCCCCCccHHHHHhhcc-cCCCcc--------eEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEe
Confidence 3344 789999999999998 443322 8999999999999998766432 344444444777899999999
Q ss_pred cCCCCC-CCcc----chHHHHHHH---hhhcCceEEEecCCCCCCCC----------------------ccccCCCceEE
Q 045363 242 IGGPSR-SYFD----DSISIGSFH---AMKKGILTACSAGNDGPYQG----------------------TVENVAPWIMT 291 (712)
Q Consensus 242 ~G~~~~-~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p~vit 291 (712)
||.... .... ..+..++.. +.++|++||+||||+|.... ..++.++|+|+
T Consensus 178 ~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vIt 257 (600)
T 2oxa_A 178 YRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLV 257 (600)
T ss_dssp CCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEE
T ss_pred ccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEE
Confidence 998742 1111 222222222 45789999999999986421 11112334555
Q ss_pred EceeccCceeEEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCC
Q 045363 292 VAASSIDRKFVTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSG 371 (712)
Q Consensus 292 Vga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~ 371 (712)
|||++
T Consensus 258 VgA~~--------------------------------------------------------------------------- 262 (600)
T 2oxa_A 258 VSALN--------------------------------------------------------------------------- 262 (600)
T ss_dssp EEEEC---------------------------------------------------------------------------
T ss_pred Eeccc---------------------------------------------------------------------------
Confidence 55432
Q ss_pred chhHHhhccCceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCC
Q 045363 372 SQDYTIDRLQGAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQ 451 (712)
Q Consensus 372 ~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~ 451 (712)
..+.++.||++||+
T Consensus 263 ------------------------------------------------------------------~~g~~a~fS~~G~~ 276 (600)
T 2oxa_A 263 ------------------------------------------------------------------ADGVRSSYSSVGSN 276 (600)
T ss_dssp ------------------------------------------------------------------TTSSBCTTCCBCTT
T ss_pred ------------------------------------------------------------------CCCCcCCcCCCCCC
Confidence 23478999999999
Q ss_pred cCCCCcccCcEEeCCCcEEeeecCCccC--CC-------------------CCCCCCccceEeeecccchhHHHHHHHHH
Q 045363 452 KITLNILKPDIAAPGLDILAAYSELASV--TG-------------------LPGDRRIVPFNILSGTSMACPHAAAAAAY 510 (712)
Q Consensus 452 ~~~~~~lKPDI~APG~~I~sa~~~~~~~--~~-------------------~~~~~~~~~y~~~sGTSmAaP~VAG~aAL 510 (712)
. ||+|||++|.+..+..... .. ...+.....|..++|||||||||||++||
T Consensus 277 v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaAL 348 (600)
T 2oxa_A 277 I--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMAL 348 (600)
T ss_dssp E--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHH
T ss_pred e--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHH
Confidence 8 9999999965443210000 00 00011123489999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHccccCCCCCC-C----------------------------CCCCCCCCCCcCccccCCCCee
Q 045363 511 VKSFHPDWSPAAIKSALMTTATPMKTKS-D----------------------------DAELASGSGQINPTKAVHPGLI 561 (712)
Q Consensus 511 l~~~~P~lsp~~ik~~L~~TA~~~~~~~-~----------------------------~~~~~~G~G~in~~~A~~~~lv 561 (712)
|+|++|+|++++||++|++||++++... + ..+..||||+||+.+|++....
T Consensus 349 l~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~ 428 (600)
T 2oxa_A 349 LMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp HHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTT
T ss_pred HHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHh
Confidence 9999999999999999999999986431 1 0347899999999999985544
Q ss_pred ee
Q 045363 562 YD 563 (712)
Q Consensus 562 ~~ 563 (712)
+.
T Consensus 429 ~~ 430 (600)
T 2oxa_A 429 HQ 430 (600)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=8.7e-47 Score=393.51 Aligned_cols=238 Identities=27% Similarity=0.353 Sum_probs=201.1
Q ss_pred hhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCC
Q 045363 88 KLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPV 167 (712)
Q Consensus 88 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 167 (712)
..+|..+++|+||+|+|||||||++||+|.+. +...++| .++. ..+.
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~-------------------------~~~~~d~-~~~~-------~~~~ 67 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR-------------------------ASSGYDF-IDND-------YDAT 67 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC-------------------------EEEEEET-TTTB-------SCCC
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc-------------------------cccCeec-CCCC-------CCCC
Confidence 36799999999999999999999999999642 3445566 3321 3457
Q ss_pred CCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHh--CCCcEEEeccCC
Q 045363 168 DTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIG--DGVDLISISIGG 244 (712)
Q Consensus 168 d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~dVIN~S~G~ 244 (712)
|..+|||||||||+|+. .||||+|+|+.+|++++.+ ++.++++++|+|+++ .+++|||||||.
T Consensus 68 d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~ 133 (278)
T 2b6n_A 68 DCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGG 133 (278)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCE
T ss_pred CCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCC
Confidence 88999999999999873 6999999999999998766 778899999999997 599999999998
Q ss_pred CCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCC-ccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecCCC
Q 045363 245 PSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQG-TVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTFSP 323 (712)
Q Consensus 245 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 323 (712)
.. ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 134 ~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 184 (278)
T 2b6n_A 134 GA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN------------------------- 184 (278)
T ss_dssp EC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------
T ss_pred Cc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-------------------------
Confidence 64 356677777889999999999999997643 346778999999986532
Q ss_pred CCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceeeeE
Q 045363 324 RKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAG 403 (712)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 403 (712)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCC
Q 045363 404 TFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLP 483 (712)
Q Consensus 404 ~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 483 (712)
+.++.||++||.. ||+|||.+|++++...
T Consensus 185 ------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~------- 213 (278)
T 2b6n_A 185 ------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTS------- 213 (278)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-------
T ss_pred ------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCC-------
Confidence 3678899999865 9999999999987641
Q ss_pred CCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCC
Q 045363 484 GDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKT 536 (712)
Q Consensus 484 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~ 536 (712)
...|..++|||||||||||++|||+|++|+|++++||++|++||++...
T Consensus 214 ----~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 262 (278)
T 2b6n_A 214 ----NSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKV 262 (278)
T ss_dssp ----TTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred ----CCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCc
Confidence 1458999999999999999999999999999999999999999987543
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=4e-47 Score=395.62 Aligned_cols=253 Identities=28% Similarity=0.341 Sum_probs=210.1
Q ss_pred CCCccccccchhh------hccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEe
Q 045363 77 TRTWDFLGMSEKL------QKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARY 150 (712)
Q Consensus 77 ~~s~~~~~~~~~~------~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~ 150 (712)
..+|.+..+.+.. .|+ ..+|+||+|+|||||||++||+|.+. +...++
T Consensus 5 ~~~W~l~~i~~~~~~~~~~~~~-~~~G~gv~VaViDsGvd~~H~~l~~~-------------------------~~~~~~ 58 (279)
T 2pwa_A 5 NAPWGLARISSTSPGTSTYYYD-ESAGQGSCVYVIDTGIEASHPEFEGR-------------------------AQMVKT 58 (279)
T ss_dssp TCCHHHHHHTCSSTTCCCEECC-TTTTTTEEEEEEESCCCTTCGGGTTC-------------------------EEEEEE
T ss_pred CCCcChhhcCCCCccccccccc-CCCCCCCEEEEEeCCCCCCChhHhCc-------------------------cccccC
Confidence 4456655554333 454 37899999999999999999999642 445566
Q ss_pred ccCCCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHH
Q 045363 151 YNLDNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDD 229 (712)
Q Consensus 151 ~~~~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 229 (712)
| .. .+.|..+|||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|
T Consensus 59 ~-~~----------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~ 113 (279)
T 2pwa_A 59 Y-YY----------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDF 113 (279)
T ss_dssp S-SS----------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred C-CC----------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHH
Confidence 6 31 35678999999999999873 7999999999999998876 788999999999
Q ss_pred HHhCCC-------cEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCC-ccccCCCceEEEceeccCcee
Q 045363 230 AIGDGV-------DLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQG-TVENVAPWIMTVAASSIDRKF 301 (712)
Q Consensus 230 a~~~g~-------dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~ 301 (712)
++++++ +|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 114 a~~~~~~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--- 186 (279)
T 2pwa_A 114 VASDKNNRNCPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--- 186 (279)
T ss_dssp HHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---
T ss_pred HHhcCccccCCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---
Confidence 999887 9999999975 3466777778889999999999999997642 356778999999986532
Q ss_pred EEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccC
Q 045363 302 VTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQ 381 (712)
Q Consensus 302 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~G 381 (712)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCc
Q 045363 382 GAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPD 461 (712)
Q Consensus 382 a~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 461 (712)
+.++.||++||.. |
T Consensus 187 ----------------------------------------------------------~~~~~~S~~G~~~--------d 200 (279)
T 2pwa_A 187 ----------------------------------------------------------DRRSSFSNYGSVL--------D 200 (279)
T ss_dssp ----------------------------------------------------------SBBCTTCCBSTTC--------C
T ss_pred ----------------------------------------------------------CCcCCcCCCCCcc--------e
Confidence 3678999999965 9
Q ss_pred EEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCCCCC
Q 045363 462 IAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKSDDA 541 (712)
Q Consensus 462 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~~~~ 541 (712)
|+|||.+|+++++. +.|..++|||||||||||++|||+|+ |++++.+||++|++||++...
T Consensus 201 i~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~----- 261 (279)
T 2pwa_A 201 IFGPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL----- 261 (279)
T ss_dssp EEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-----
T ss_pred EEEecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-----
Confidence 99999999999875 35899999999999999999999999 999999999999999998653
Q ss_pred CCCCCCCCcCcc
Q 045363 542 ELASGSGQINPT 553 (712)
Q Consensus 542 ~~~~G~G~in~~ 553 (712)
..+|+|.+|+.
T Consensus 262 -~~~~~g~~n~l 272 (279)
T 2pwa_A 262 -SNIPFGTVNLL 272 (279)
T ss_dssp -BSCCTTSCCEE
T ss_pred -CCCCCCCccEe
Confidence 23688888873
No 29
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.2e-46 Score=392.51 Aligned_cols=236 Identities=26% Similarity=0.323 Sum_probs=202.5
Q ss_pred hhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCC
Q 045363 88 KLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPV 167 (712)
Q Consensus 88 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 167 (712)
..+|..+.+|+||+|+|||||||++||+|.+. +...++| .. ....
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-------------------------~~~~~~~-~~---------~~~~ 65 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-------------------------ARVGYDA-LG---------GNGQ 65 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-------------------------EEEEEET-TS---------SCSC
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC-------------------------eeccccC-CC---------CCCC
Confidence 47899999999999999999999999999642 3445555 33 2456
Q ss_pred CCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC--CCcEEEeccCC
Q 045363 168 DTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD--GVDLISISIGG 244 (712)
Q Consensus 168 d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dVIN~S~G~ 244 (712)
|..||||||||||+|.. .||||+|+|+.+|+++..+ ....+++++++|+++. +++|||||||.
T Consensus 66 d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~ 131 (276)
T 4dzt_A 66 DCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGG 131 (276)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCE
T ss_pred CCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence 78999999999999873 6999999999999998766 7888999999999987 89999999997
Q ss_pred CCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCc-cccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecCCC
Q 045363 245 PSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGT-VENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTFSP 323 (712)
Q Consensus 245 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 323 (712)
.. ...+..++.++.++|+++|+||||+|..... .+...+++|+|||++.+
T Consensus 132 ~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------- 182 (276)
T 4dzt_A 132 GV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS------------------------- 182 (276)
T ss_dssp EC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------
T ss_pred CC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-------------------------
Confidence 53 4667777788999999999999999976543 36778999999986432
Q ss_pred CCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceeeeE
Q 045363 324 RKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLIAG 403 (712)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 403 (712)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCCCC
Q 045363 404 TFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTGLP 483 (712)
Q Consensus 404 ~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 483 (712)
+.++.||++||.. ||+|||.+|++++...
T Consensus 183 ------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~------- 211 (276)
T 4dzt_A 183 ------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTS------- 211 (276)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-------
T ss_pred ------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCC-------
Confidence 3678999999977 9999999999998641
Q ss_pred CCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCC
Q 045363 484 GDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKT 536 (712)
Q Consensus 484 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~ 536 (712)
...|..++|||||||+|||++|||+|++|+|++++||++|++||++...
T Consensus 212 ----~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 212 ----DTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp ----SSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred ----CCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 1358999999999999999999999999999999999999999999764
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.8e-46 Score=419.55 Aligned_cols=292 Identities=15% Similarity=0.137 Sum_probs=220.2
Q ss_pred CCccccc-----cchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEecc
Q 045363 78 RTWDFLG-----MSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYN 152 (712)
Q Consensus 78 ~s~~~~~-----~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~ 152 (712)
.+|.+.. ++...+|+.+++|+||+|||||||||++||+|.+.-. ....++|
T Consensus 13 ~qW~l~~~~~~~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-----------------------~~~~~d~- 68 (471)
T 1p8j_A 13 QQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-----------------------PGASFDV- 68 (471)
T ss_dssp GCTTTSCTTSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-----------------------GGGCEET-
T ss_pred hCcCCCCCCccCCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-----------------------ccCcccc-
Confidence 4565543 5566999999999999999999999999999975310 0012334
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHh
Q 045363 153 LDNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIG 232 (712)
Q Consensus 153 ~~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~ 232 (712)
.++. ..+.+...+.|..+|||||||||+|...++.+. .||||+|+|+.+|+++ +...++++|++++++
T Consensus 69 ~~~~-~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g~--------~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~ 136 (471)
T 1p8j_A 69 NDQD-PDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCG--------VGVAYNARIGGVRMLD---GEVTDAVEARSLGLN 136 (471)
T ss_dssp TTTB-SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSSSC--------CCTTTTSEEEEEECSS---SCCCHHHHHHHHTSC
T ss_pred cCCC-CCCCCccCCCCCCCcHHHHHHHHHeeccCCCCC--------EEECCCCeEEEEEccC---CchhHHHHHHHhhhc
Confidence 2221 111111245678999999999999986554332 8999999999999986 346789999999999
Q ss_pred -CCCcEEEeccCCCCCC----CccchHHHHHHHhh-----hcCceEEEecCCCCCCCCc----cccCCCceEEEceeccC
Q 045363 233 -DGVDLISISIGGPSRS----YFDDSISIGSFHAM-----KKGILTACSAGNDGPYQGT----VENVAPWIMTVAASSID 298 (712)
Q Consensus 233 -~g~dVIN~S~G~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVga~~~~ 298 (712)
++++|||||||..... .....+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 137 ~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~ 216 (471)
T 1p8j_A 137 PNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF 216 (471)
T ss_dssp TTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT
T ss_pred cCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC
Confidence 8999999999986321 11223344444444 3699999999999975322 12345889999986532
Q ss_pred ceeEEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhh
Q 045363 299 RKFVTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTID 378 (712)
Q Consensus 299 ~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~ 378 (712)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcc
Q 045363 379 RLQGAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNIL 458 (712)
Q Consensus 379 ~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~l 458 (712)
+.++.||++||.. ....
T Consensus 217 -------------------------------------------------------------g~~a~~S~~g~~~--~~~~ 233 (471)
T 1p8j_A 217 -------------------------------------------------------------GNVPWYSEACSST--LATT 233 (471)
T ss_dssp -------------------------------------------------------------SCCCTTCCBCTTC--CEEE
T ss_pred -------------------------------------------------------------CCcccccCCCCcc--eEEe
Confidence 3678899999987 5555
Q ss_pred cCcEEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCCC
Q 045363 459 KPDIAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTKS 538 (712)
Q Consensus 459 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~~ 538 (712)
+|...+||.+|+++... ...|..++|||||||||||++|||+|++|+|++++||++|++||++.....
T Consensus 234 ~~~~~~~g~~i~st~~~------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~ 301 (471)
T 1p8j_A 234 YSSGNQNEKQIVTTDLR------------QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA 301 (471)
T ss_dssp ECCCSTTSCCEEEEETT------------TEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC
T ss_pred CCCCCCCCCCEEEeeCC------------CCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCC
Confidence 66666677899998753 135899999999999999999999999999999999999999999986531
Q ss_pred ---------CCCCCCCCCCCcCccccCCCCe
Q 045363 539 ---------DDAELASGSGQINPTKAVHPGL 560 (712)
Q Consensus 539 ---------~~~~~~~G~G~in~~~A~~~~l 560 (712)
...+..||||+||+.+|++...
T Consensus 302 ~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 302 DDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp SCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred CCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 1135789999999999998543
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.4e-45 Score=415.05 Aligned_cols=278 Identities=17% Similarity=0.155 Sum_probs=215.3
Q ss_pred ccchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCC
Q 045363 84 GMSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQ 163 (712)
Q Consensus 84 ~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~ 163 (712)
.++...+|+.+++|+||+|||||||||++||+|.+... ..+.++| .++. .++
T Consensus 40 ~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~-----------------------~~~~~d~-~~~~----~~~ 91 (503)
T 2id4_A 40 DINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC-----------------------AEGSWDF-NDNT----NLP 91 (503)
T ss_dssp SCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC-----------------------GGGCEET-TTTB----SCC
T ss_pred ccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc-----------------------ccCcccC-CCCC----CCC
Confidence 34556999999999999999999999999999976411 0112344 3221 111
Q ss_pred CCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHhCCCcEEEeccC
Q 045363 164 KSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIGDGVDLISISIG 243 (712)
Q Consensus 164 ~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~S~G 243 (712)
....|..+|||||||||+|...++.+. .||||+|+|+.+|+++.. .+..++++||+|+++++ +|||||||
T Consensus 92 ~p~~d~~gHGT~vAGiiaa~~~n~~~~--------~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G 161 (503)
T 2id4_A 92 KPRLSDDYHGTRCAGEIAAKKGNNFCG--------VGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWG 161 (503)
T ss_dssp CCCSTTTTHHHHHHHHHHCCSSSSSSC--------CCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEE
T ss_pred CCCCCCCChHHHHHHHHHhccCCCCCc--------EEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCC
Confidence 223578899999999999987554332 799999999999999743 67888999999999988 99999999
Q ss_pred CCCCC----CccchHHHHHHHhh-----hcCceEEEecCCCCCCCCc--cc--cCCCceEEEceeccCceeEEEEEeCCC
Q 045363 244 GPSRS----YFDDSISIGSFHAM-----KKGILTACSAGNDGPYQGT--VE--NVAPWIMTVAASSIDRKFVTAVKLGNG 310 (712)
Q Consensus 244 ~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~--~~--~~~p~vitVga~~~~~~~~~~~~~~~g 310 (712)
..... .....+..++.++. .+|++||+||||+|..... .+ ..++++|+|||++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------------ 229 (503)
T 2id4_A 162 PADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------------ 229 (503)
T ss_dssp SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT------------
T ss_pred cCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC------------
Confidence 86321 12234555555555 4799999999999965422 22 245789999986532
Q ss_pred ceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEec
Q 045363 311 MRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVD 390 (712)
Q Consensus 311 ~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~ 390 (712)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEe----CC
Q 045363 391 APTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAA----PG 466 (712)
Q Consensus 391 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~A----PG 466 (712)
+.++.||++||.. |++| ||
T Consensus 230 -------------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG 252 (503)
T 2id4_A 230 -------------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSG 252 (503)
T ss_dssp -------------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTT
T ss_pred -------------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCC
Confidence 3678999999988 8887 89
Q ss_pred CcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCCC-C-------
Q 045363 467 LDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKTK-S------- 538 (712)
Q Consensus 467 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~~-~------- 538 (712)
..|+++..+ ...|..++|||||||||||++|||+|++|+|++++||++|++||+++... .
T Consensus 253 ~~I~st~~~------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~ 320 (503)
T 2id4_A 253 EYIHSSDIN------------GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA 320 (503)
T ss_dssp BCEEEECST------------TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS
T ss_pred CceEeecCC------------CCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC
Confidence 999998542 14699999999999999999999999999999999999999999987653 1
Q ss_pred --CCCCCCCCCCCcCccccCCCCe
Q 045363 539 --DDAELASGSGQINPTKAVHPGL 560 (712)
Q Consensus 539 --~~~~~~~G~G~in~~~A~~~~l 560 (712)
...+..||||+||+.+|++...
T Consensus 321 ~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 321 MGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp SSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred CCCccCcccCCcEecHHHHHHHHh
Confidence 1135689999999999998543
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1e-45 Score=386.10 Aligned_cols=242 Identities=29% Similarity=0.383 Sum_probs=201.9
Q ss_pred CCCccccccchh------hhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEe
Q 045363 77 TRTWDFLGMSEK------LQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARY 150 (712)
Q Consensus 77 ~~s~~~~~~~~~------~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~ 150 (712)
..+|.+..+... .+|+.. +|+||+|+|||||||++||+|.+ ++....+
T Consensus 6 ~~~W~l~~i~~~~~~~~~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~-------------------------~~~~~~~ 59 (279)
T 3f7m_A 6 GATWGLTRISHRARGSTAYAYDTS-AGAGACVYVIDTGVEDTHPDFEG-------------------------RAKQIKS 59 (279)
T ss_dssp TCCHHHHHHTCSSSCCCSEEECTT-TTTTEEEEEEESCCCTTCGGGTT-------------------------CEEEEEE
T ss_pred CCCCCHhhcCCCCCCCcceeecCC-CCCCCEEEEEcCCCCCCChhhcc-------------------------ccccccC
Confidence 345655555433 456655 99999999999999999999964 2445555
Q ss_pred ccCCCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHH
Q 045363 151 YNLDNALDPNTDQKSPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDD 229 (712)
Q Consensus 151 ~~~~~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 229 (712)
| ..+ ..|..||||||||||+|+. .||||+|+|+.+|+++..+ ++..+++++|+|
T Consensus 60 ~-~~~----------~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~ 114 (279)
T 3f7m_A 60 Y-AST----------ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDF 114 (279)
T ss_dssp C-SSS----------SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred C-CCC----------CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHH
Confidence 6 332 2378999999999999873 6999999999999998766 788899999999
Q ss_pred HHhCC-------CcEEEeccCCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCCCc-cccCCCceEEEceeccCcee
Q 045363 230 AIGDG-------VDLISISIGGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQGT-VENVAPWIMTVAASSIDRKF 301 (712)
Q Consensus 230 a~~~g-------~dVIN~S~G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~ 301 (712)
+++++ ++|||||||.. ....+..++.++.++|++||+||||+|..... .+...+++|+|||++.+
T Consensus 115 ~~~~~~~~~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--- 187 (279)
T 3f7m_A 115 VASDRQSRNCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN--- 187 (279)
T ss_dssp HHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---
T ss_pred HHhccccccCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC---
Confidence 99876 89999999975 45667777888999999999999999976543 36778999999986432
Q ss_pred EEEEEeCCCceEeeeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccC
Q 045363 302 VTAVKLGNGMRTSGISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQ 381 (712)
Q Consensus 302 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~G 381 (712)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEecCCCCcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCc
Q 045363 382 GAGTIVAVDAPTDIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPD 461 (712)
Q Consensus 382 a~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 461 (712)
+.++.||++||.. |
T Consensus 188 ----------------------------------------------------------~~~~~~S~~g~~~--------d 201 (279)
T 3f7m_A 188 ----------------------------------------------------------DVRSTFSNYGRVV--------D 201 (279)
T ss_dssp ----------------------------------------------------------SBBCTTCCBSTTC--------C
T ss_pred ----------------------------------------------------------CCCCCCCCCCCCC--------e
Confidence 3678999999966 9
Q ss_pred EEeCCCcEEeeecCCccCCCCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCCC
Q 045363 462 IAAPGLDILAAYSELASVTGLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMKT 536 (712)
Q Consensus 462 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~~ 536 (712)
|+|||.+|+++++. ..|..++|||||||+|||++|||+|++|+ ++++||++|++||++...
T Consensus 202 i~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 202 IFAPGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp EEEECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred EEECCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 99999999999874 35899999999999999999999999999 999999999999988654
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=4.1e-45 Score=404.62 Aligned_cols=246 Identities=21% Similarity=0.231 Sum_probs=188.4
Q ss_pred hccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCCCCCCC
Q 045363 90 QKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQKSPVDT 169 (712)
Q Consensus 90 ~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~~~~d~ 169 (712)
.|..+++|+||+|+|||||||++||+|.+.. ....+.+..+.. . ........|.
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~------------------------~~~~~~~v~~~d-g-~~f~~~~~D~ 71 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------------------------MVTDFENVPEED-G-TRFHRQASKC 71 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE------------------------EEEEEECCCCCC---------CTTT
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc------------------------cccCcccccCCC-C-ccccCCCCCC
Confidence 7888999999999999999999999997531 111111101110 0 0001245678
Q ss_pred CCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHhC------CCcEEEecc
Q 045363 170 DGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAFDDAIGD------GVDLISISI 242 (712)
Q Consensus 170 ~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~dVIN~S~ 242 (712)
.||||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|+++. +++||||||
T Consensus 72 ~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSl 137 (546)
T 2qtw_B 72 DSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPL 137 (546)
T ss_dssp THHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECE
T ss_pred CChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecC
Confidence 999999999999874 6999999999999998876 6788999999999984 899999999
Q ss_pred CCCCCCCccchHHHHHHHhhhcCceEEEecCCCCCCC-CccccCCCceEEEceeccCceeEEEEEeCCCceEeeeeeecC
Q 045363 243 GGPSRSYFDDSISIGSFHAMKKGILTACSAGNDGPYQ-GTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTSGISINTF 321 (712)
Q Consensus 243 G~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~ 321 (712)
|+. ....+..++.++.++|++||+||||+|... ...+...|++|+|||++.+...
T Consensus 138 Gg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~-------------------- 193 (546)
T 2qtw_B 138 AGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP-------------------- 193 (546)
T ss_dssp EEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB--------------------
T ss_pred CCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc--------------------
Confidence 975 345677778889999999999999999754 3346778999999997643100
Q ss_pred CCCCceeeeEecccccccccccccCcCCCCCCCCCCCcccceEEEEecCCchhHHhhccCceEEEEEecCCCCcccceee
Q 045363 322 SPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMKKVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPTDIAIATLI 401 (712)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 401 (712)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecCCccCCC
Q 045363 402 AGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSELASVTG 481 (712)
Q Consensus 402 p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 481 (712)
...-..||++|+. |||+|||.+|+++++..
T Consensus 194 -------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~----- 223 (546)
T 2qtw_B 194 -------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDC----- 223 (546)
T ss_dssp -------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTS-----
T ss_pred -------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCC-----
Confidence 0001128999974 49999999999998641
Q ss_pred CCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccCCC
Q 045363 482 LPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTATPMK 535 (712)
Q Consensus 482 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~~~~ 535 (712)
...|..++|||||||||||++|||+|++|+|+++|||++|++||.+..
T Consensus 224 ------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~ 271 (546)
T 2qtw_B 224 ------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 271 (546)
T ss_dssp ------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESC
T ss_pred ------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 135899999999999999999999999999999999999999997643
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=4.8e-43 Score=404.69 Aligned_cols=309 Identities=19% Similarity=0.173 Sum_probs=197.2
Q ss_pred cchhhhccCCCCCCCcEEEEEcCCCCCCCCCCcCCCCCCCCCccccccccCCccccCCceeEEeEeccCCCCCCCCCCCC
Q 045363 85 MSEKLQKRSSKAQSNIIVGLLDTGIWVESPSFNDKGFGPPPAKWKGKCVTGANFTRCNKKVIGARYYNLDNALDPNTDQK 164 (712)
Q Consensus 85 ~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~f~~~n~ki~g~~~~~~~~~~~~~~~~~ 164 (712)
++...+|+.+++|+||+|||||||||++||||.++- ..+.++| .++. .++.
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~------------------------~~~~~~~-~~~~----~dp~ 107 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV------------------------RPGSKNV-VTGS----DDPT 107 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB------------------------CSCCBCT-TTSS----SCCC
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc------------------------ccCccee-ecCC----CCCC
Confidence 345689999999999999999999999999997531 1112233 2221 1122
Q ss_pred CCCCCCCChhHHHHHhccCCCCCCcccccccceeeeecCCCeEEEEEeecCCC-CChHHHHHHH-HHHHhCCCcEEEecc
Q 045363 165 SPVDTDGHGTHTSSTAAGETVKGASLYGIAQGTARGGVPSARIAMYKVCWSGG-CADMDILAAF-DDAIGDGVDLISISI 242 (712)
Q Consensus 165 ~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~dVIN~S~ 242 (712)
...|.++|||||||||||.. ++. | +.||||+|+|+.+|++++.+ ....+++.|+ +++..++++|||+||
T Consensus 108 p~~~~~gHGThVAGiIAa~~-n~~---g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~ 178 (600)
T 3hjr_A 108 PTDPDTAHGTSVSGIIAAVD-NAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCCS-SSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECC
T ss_pred CCCCCCChHHHHHHHHhEeC-CCC---C-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEeccc
Confidence 33457899999999999863 222 1 18999999999999998766 6677777666 667788999999999
Q ss_pred CCCC-CCCccch-----HHHHHHH--hhhcCceEEEecCCCCCCCCccccCCCceEEEceeccCceeEEEEEeCCCceEe
Q 045363 243 GGPS-RSYFDDS-----ISIGSFH--AMKKGILTACSAGNDGPYQGTVENVAPWIMTVAASSIDRKFVTAVKLGNGMRTS 314 (712)
Q Consensus 243 G~~~-~~~~~~~-----~~~a~~~--a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~ 314 (712)
|... .+...+. +..++.. ...+|+++|+||||.+....... +.+.+ .+++..
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~------------~g~~~~-- 238 (600)
T 3hjr_A 179 GMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNR------------TGNGPK-- 238 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEE------------ESSCCC--
T ss_pred CccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------ccccc------------CCCCCC--
Confidence 9762 1111111 2222221 23579999999999764311000 00000 000000
Q ss_pred eeeeecCCCCCceeeeEecccccccccccccCcCCCCCCCCCCC-cccceEEEEecCCchhHHhhccCceEEEEEecCCC
Q 045363 315 GISINTFSPRKAMYPLTNGARAANVTAEIYGNVGACDYGTLSMK-KVKGKIVYCLGSGSQDYTIDRLQGAGTIVAVDAPT 393 (712)
Q Consensus 315 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~gkivl~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 393 (712)
+ ....|. +++. ... .++.+||.
T Consensus 239 -------------~-----------------~~~~~~---~d~~~~~~--------------~~IsVgA~---------- 261 (600)
T 3hjr_A 239 -------------L-----------------PFENSN---LDPSNSNF--------------WNLVVSAL---------- 261 (600)
T ss_dssp -------------C-----------------CSSBTT---SSGGGGSS--------------SEEEEEEE----------
T ss_pred -------------C-----------------Cccccc---ccCccccC--------------cceEEeee----------
Confidence 0 000010 0000 000 00111110
Q ss_pred CcccceeeeEEEeChhhHHHHHHHHhcCCCceEEEEEeeeeeCCCCCccccccCCCCCcCCCCcccCcEEeCCCcEE---
Q 045363 394 DIAIATLIAGTFVVPEVGIKIDQYINSTKNPQAVIYKTRVVNTSTAPFIASFSSRGPQKITLNILKPDIAAPGLDIL--- 470 (712)
Q Consensus 394 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~--- 470 (712)
...+.++.||++|+.. +++|||.++.
T Consensus 262 -------------------------------------------~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~ 290 (600)
T 3hjr_A 262 -------------------------------------------NADGVRSSYSSVGSNI--------FLSATGGEYGTDT 290 (600)
T ss_dssp -------------------------------------------CTTSSBCTTCCBCTTC--------CEEEECCSCSSSS
T ss_pred -------------------------------------------cCCCCEeecccCCcce--------eeccCCCCCCCCC
Confidence 2345789999999988 8999997632
Q ss_pred -----eeecCCccCC-------------CCCCCCCccceEeeecccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccc
Q 045363 471 -----AAYSELASVT-------------GLPGDRRIVPFNILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKSALMTTAT 532 (712)
Q Consensus 471 -----sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~~L~~TA~ 532 (712)
+..++..... ..........|..++|||||||||||++|||+|++|+|+++|||++|++||+
T Consensus 291 ~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~ 370 (600)
T 3hjr_A 291 PAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSAT 370 (600)
T ss_dssp CCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCB
T ss_pred cceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCc
Confidence 2111100000 0000122356889999999999999999999999999999999999999999
Q ss_pred CCCCC-CC-------------------C---------CCCCCCCCCcCccccCCCC
Q 045363 533 PMKTK-SD-------------------D---------AELASGSGQINPTKAVHPG 559 (712)
Q Consensus 533 ~~~~~-~~-------------------~---------~~~~~G~G~in~~~A~~~~ 559 (712)
+++.. .| . ....||+|+||+.+|++.+
T Consensus 371 ~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 371 RVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp CCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred cCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHh
Confidence 98754 22 0 2567999999999998743
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=2.2e-24 Score=243.24 Aligned_cols=97 Identities=24% Similarity=0.384 Sum_probs=78.0
Q ss_pred eeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHh---CCCcEEEeccCCCCCCC---ccchHHHHHHHhhhcCceEEEe
Q 045363 198 ARGGVPSARIAMYKVCWSGGCADMDILAAFDDAIG---DGVDLISISIGGPSRSY---FDDSISIGSFHAMKKGILTACS 271 (712)
Q Consensus 198 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIN~S~G~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 271 (712)
+.||||+|+|+.|++. ....+++++|+||++ ++++|||||||.....+ +...+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999974 245789999999998 79999999999874221 1245666777888999999999
Q ss_pred cCCCCCCC--------CccccCCCceEEEceeccC
Q 045363 272 AGNDGPYQ--------GTVENVAPWIMTVAASSID 298 (712)
Q Consensus 272 AGN~g~~~--------~~~~~~~p~vitVga~~~~ 298 (712)
|||+|... ...++.+|+|++||+++..
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999643 3456788999999998753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=1.2e-21 Score=210.62 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=80.8
Q ss_pred eeecCCCeEEEEEeecCCCCChHHHHHHHHHHHh-CCCcEEEeccCCCCC----CCccchHHHHHHHhhhcCceEEEecC
Q 045363 199 RGGVPSARIAMYKVCWSGGCADMDILAAFDDAIG-DGVDLISISIGGPSR----SYFDDSISIGSFHAMKKGILTACSAG 273 (712)
Q Consensus 199 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~S~G~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 273 (712)
..+||+++++.+++.+..+++.++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3578999999999987655778899999999998 899999999998631 12234667777788899999999999
Q ss_pred CCCCCC-------------CccccCCCceEEEceeccC
Q 045363 274 NDGPYQ-------------GTVENVAPWIMTVAASSID 298 (712)
Q Consensus 274 N~g~~~-------------~~~~~~~p~vitVga~~~~ 298 (712)
|+|... ...+..+|+|++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999653 2455778999999998754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.93 E-value=1.6e-09 Score=121.20 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=63.3
Q ss_pred eeecCCCeEEEEEeecCCCCChHHHHHHHHHHHh--CCCcEEEeccCCCCCCC---ccchHHHHHHHhhhcCceEEEecC
Q 045363 199 RGGVPSARIAMYKVCWSGGCADMDILAAFDDAIG--DGVDLISISIGGPSRSY---FDDSISIGSFHAMKKGILTACSAG 273 (712)
Q Consensus 199 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~--~g~dVIN~S~G~~~~~~---~~~~~~~a~~~a~~~Gi~vV~AAG 273 (712)
.+++++..++.+-.... ......++..+++... +-++|||+|||...... +.+.+...+..+..+||.|++|+|
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 34455666555533211 1122344554444432 46899999999874221 223455666678889999999999
Q ss_pred CCCCCC----------CccccCCCceEEEceecc
Q 045363 274 NDGPYQ----------GTVENVAPWIMTVAASSI 297 (712)
Q Consensus 274 N~g~~~----------~~~~~~~p~vitVga~~~ 297 (712)
|+|... ...++..|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999643 245678899999999864
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.60 E-value=3.8e-08 Score=86.97 Aligned_cols=64 Identities=9% Similarity=0.039 Sum_probs=56.4
Q ss_pred CcchHHHHHHHHHHhCCccccccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeec
Q 045363 10 ISAVKEHHSLLTTAIGDEKLARESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKL 74 (712)
Q Consensus 10 ~~~~~~h~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~ 74 (712)
++.+..|++||.+++++ .....+++|+|++.|+||+++|+++++++|+++|+|.+||+++.++.
T Consensus 50 ~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 50 LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 44677999999999874 23467999999999999999999999999999999999999998765
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.13 E-value=3.1e-06 Score=69.67 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=43.3
Q ss_pred ccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeecccCC
Q 045363 31 RESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKLHTTR 78 (712)
Q Consensus 31 ~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~~~~~ 78 (712)
..+++|+|++ |+||+++++++++++|+++|+|.+||+++.++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 5789999998 9999999999999999999999999999999987654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.01 E-value=6.6e-06 Score=73.45 Aligned_cols=62 Identities=8% Similarity=0.013 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHhCCccccccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeec
Q 045363 12 AVKEHHSLLTTAIGDEKLARESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKL 74 (712)
Q Consensus 12 ~~~~h~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~ 74 (712)
....|.+++.++... .....+++|+|++.||||++++++++++.|+++|+|.+|++++.++.
T Consensus 62 ~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 62 QSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 455666677665431 11356899999999999999999999999999999999999998765
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.88 E-value=6.9e-05 Score=71.85 Aligned_cols=86 Identities=16% Similarity=0.063 Sum_probs=67.9
Q ss_pred CcCCCCCCCCCCCc-------ccceEEEEecCC-c-----hhHHhhccCceEEEEEecCC-CC----c--ccceeeeEEE
Q 045363 346 NVGACDYGTLSMKK-------VKGKIVYCLGSG-S-----QDYTIDRLQGAGTIVAVDAP-TD----I--AIATLIAGTF 405 (712)
Q Consensus 346 ~~~~c~~~~~~~~~-------~~gkivl~~~~~-~-----~~~~~~~~Ga~g~i~~~~~~-~~----~--~~~~~~p~~~ 405 (712)
....|.+....... .++||+|++|+. | .. +++.+||.++|++|+.. +. + .....||+++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~-nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~ 160 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIH-LAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIM 160 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHH-HHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHH-HHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEE
Confidence 35689886653322 479999999999 8 66 99999999999999852 11 1 2335799999
Q ss_pred eChhhHHHHHHHHhcCCCceEEEEEee
Q 045363 406 VVPEVGIKIDQYINSTKNPQAVIYKTR 432 (712)
Q Consensus 406 i~~~~g~~l~~~~~~~~~~~~~~~~~~ 432 (712)
|+.++|+.|++++.++...+.+|....
T Consensus 161 Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 161 IGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 999999999999999888887777654
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.78 E-value=4.5e-05 Score=61.91 Aligned_cols=56 Identities=14% Similarity=0.285 Sum_probs=48.4
Q ss_pred chHHHHHHHHHHhCCccccccceEEEec-ceeeeEEEEcCHHHHHHhhcC--CCeEEEEeCeeeec
Q 045363 12 AVKEHHSLLTTAIGDEKLARESKIRSYG-KSFNGFVARLLPHEAKRLSEE--ESVVSVFENTRRKL 74 (712)
Q Consensus 12 ~~~~h~~~~~~~~~~~~~~~~~v~~~y~-~~~ng~s~~l~~~~i~~l~~~--p~V~~V~~~~~~~~ 74 (712)
....|.+|++.. ..++.+.|+ .+|+||++.++++.+++|+++ |.|.+||+++.+..
T Consensus 17 ~~~~~~~~~~~~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 17 KIRETKDEVIAE-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp HHHHHHHHHHHH-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred HHHHHHHHHHhh-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 567788888775 346889994 899999999999999999999 89999999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.79 E-value=0.0016 Score=50.89 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=41.5
Q ss_pred cccccceEEEecceeeeEEEEcCHHHHHHhhcCCCeEEEEeCeeeec
Q 045363 28 KLARESKIRSYGKSFNGFVARLLPHEAKRLSEEESVVSVFENTRRKL 74 (712)
Q Consensus 28 ~~~~~~v~~~y~~~~ng~s~~l~~~~i~~l~~~p~V~~V~~~~~~~~ 74 (712)
+..+.++.++| ..+++++++||++.++.|+++|+|++|+++...+.
T Consensus 19 ~~~gG~i~~~~-~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 19 LGIGGHIVYQF-KLIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp GGGTCEEEEEC-SSSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred HHCCCEEEEEe-cCCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 45678999999 88999999999999999999999999999987653
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.90 E-value=0.072 Score=46.98 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=55.2
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEEEE-cCCcEEEee
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLEWS-DTKHSVKSP 701 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~-~~~~~v~~P 701 (712)
+.+.++.|+|+|+.+..|+..... -++++|..-.+ ++|+++.++|+|.... .+.+++.|.+. ++...+.++
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEECCE
T ss_pred eEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEEEE
Confidence 677788999999999999877643 37788999888 6899999999999986 34456666554 444555555
Q ss_pred EE
Q 045363 702 IL 703 (712)
Q Consensus 702 ~~ 703 (712)
+.
T Consensus 114 L~ 115 (122)
T 2ys4_A 114 LY 115 (122)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.79 E-value=0.29 Score=52.97 Aligned_cols=64 Identities=13% Similarity=0.173 Sum_probs=52.0
Q ss_pred CCCCcccceEEEEecCCc-----hhHHhhccCceEEEEEecCCCCc------ccceeeeEEEeChhhHHHHHHHHh
Q 045363 355 LSMKKVKGKIVYCLGSGS-----QDYTIDRLQGAGTIVAVDAPTDI------AIATLIAGTFVVPEVGIKIDQYIN 419 (712)
Q Consensus 355 ~~~~~~~gkivl~~~~~~-----~~~~~~~~Ga~g~i~~~~~~~~~------~~~~~~p~~~i~~~~g~~l~~~~~ 419 (712)
+...+++|||||+.++.| .. +++..||.|+|++++..... .....+|.+.++.++++.|...+.
T Consensus 108 ~~~~dv~GkIvlv~~g~~~~~~k~~-~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRGNISFADKVR-NAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECCSSCHHHHHH-HHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCCCCCHHHHHH-HHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 344589999999999987 55 88899999999999864321 134579999999999999999884
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=92.64 E-value=0.33 Score=52.91 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=55.8
Q ss_pred CCcccceEEEEecCCch------------------hHHhhccCceEEEEEecCCCC--------c--c-cceeeeEEEeC
Q 045363 357 MKKVKGKIVYCLGSGSQ------------------DYTIDRLQGAGTIVAVDAPTD--------I--A-IATLIAGTFVV 407 (712)
Q Consensus 357 ~~~~~gkivl~~~~~~~------------------~~~~~~~Ga~g~i~~~~~~~~--------~--~-~~~~~p~~~i~ 407 (712)
..+++|||||+.++.|. . ++..+||+|+|+++..... + . ....||++.|+
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~-~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is 202 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAV-AAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAIS 202 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHH-HHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEEC
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHH-HHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEec
Confidence 56899999999987651 2 4778999999999864321 1 1 23569999999
Q ss_pred hhhHHHHHHHHhcCCCceEEEEEe
Q 045363 408 PEVGIKIDQYINSTKNPQAVIYKT 431 (712)
Q Consensus 408 ~~~g~~l~~~~~~~~~~~~~~~~~ 431 (712)
.++++.|...+..+....+++...
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEe
Confidence 999999999998776555555443
No 47
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=90.75 E-value=0.17 Score=55.28 Aligned_cols=31 Identities=29% Similarity=0.330 Sum_probs=26.6
Q ss_pred CCCCccccccCCCCCcCCCCcccCcEEeCCCcEEeeecC
Q 045363 437 STAPFIASFSSRGPQKITLNILKPDIAAPGLDILAAYSE 475 (712)
Q Consensus 437 ~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 475 (712)
...+.++.||++|+.. ||+|||.+|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3456899999999876 999999999999863
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.93 E-value=0.29 Score=59.56 Aligned_cols=26 Identities=8% Similarity=0.308 Sum_probs=23.8
Q ss_pred CCCCCCCcEEEEEcCCCCCCCCCCcC
Q 045363 93 SSKAQSNIIVGLLDTGIWVESPSFND 118 (712)
Q Consensus 93 ~~~~G~gv~VgVIDtGid~~Hp~f~~ 118 (712)
..+.|+||+|||+|||||+.+|.|.-
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCCccEEEEEeCCCCCCCCccee
Confidence 37899999999999999999999973
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.70 E-value=1.9 Score=36.72 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=58.6
Q ss_pred CCCCceeeeecCCCceeEEEEEEEEEcCCCCeeEEEEEeC-CCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeE
Q 045363 607 LNYPSMHFHFTNESSISAIFRRTVTNVGFAKSLYKATVHS-PKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASIL 685 (712)
Q Consensus 607 ln~ps~~~~~~~~~~~~~~~~rtv~n~~~~~~ty~~~~~~-~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 685 (712)
++...+-++...-+. ..+.+.+++|.|+.+..|+..... ..+...+++|..-.+ ++|++++++|++.+... +. +
T Consensus 12 ~~~~~ldFG~v~~g~-~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~--g~-f 86 (112)
T 2e6j_A 12 FNFELLDIGKVFTGS-AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL--GN-F 86 (112)
T ss_dssp ESCSEEEEEEEESSC-CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC--EE-E
T ss_pred ECcccEecEeEEECC-EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc--ce-E
Confidence 333444444443121 567788999999999999984311 112346778998888 68999999999998752 33 3
Q ss_pred EEEEEEE-cC-CcEEEeeEEEE
Q 045363 686 SALLEWS-DT-KHSVKSPILVY 705 (712)
Q Consensus 686 ~G~i~~~-~~-~~~v~~P~~~~ 705 (712)
.=.|++. .+ ...+++-+-+.
T Consensus 87 ~~~i~v~~~g~~~~~~L~i~G~ 108 (112)
T 2e6j_A 87 EEEFLVNVNGSPEPVKLTIRGC 108 (112)
T ss_dssp EEEECEEESSCSSCCCEEEEEE
T ss_pred EEEEEEEECCCCceEEEEEEEE
Confidence 4456554 23 33344444433
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=87.30 E-value=3.3 Score=35.89 Aligned_cols=58 Identities=9% Similarity=0.109 Sum_probs=47.2
Q ss_pred CceeEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEeccc
Q 045363 620 SSISAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQ 679 (712)
Q Consensus 620 ~~~~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~ 679 (712)
+...-..+..+.|....+.+|+++++..+++++. .+..+.+ ++++..++.|.|.....
T Consensus 29 G~I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 29 GEVENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADPD 86 (118)
T ss_dssp CSEEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECGG
T ss_pred CeEEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEChH
Confidence 4457788899999999999999999988777654 2456777 78999999999988763
No 51
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=86.77 E-value=7.2 Score=34.89 Aligned_cols=84 Identities=13% Similarity=-0.007 Sum_probs=60.4
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCC----CCcEEEEeeceEEeecCCcEEEEEEEEEeccc------CCCCeEEEEEEEE
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSP----KGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQ------SGASILSALLEWS 692 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~----~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~------~~~~~~~G~i~~~ 692 (712)
..+.+++++|.|.-+.+|++..... ..--++++|..-++ .+|++.+++|++..++. ....-++--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 5677889999999999999985421 11236778998888 79999999999986541 1112345556654
Q ss_pred -cCCcEEEeeEEEEec
Q 045363 693 -DTKHSVKSPILVYKQ 707 (712)
Q Consensus 693 -~~~~~v~~P~~~~~~ 707 (712)
++..+..+|+.+.+.
T Consensus 123 Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 123 LDRGKDYFLTISGNYL 138 (140)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred eecCCcEEEEEecccc
Confidence 577888999887654
No 52
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=82.68 E-value=1.2 Score=50.61 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=47.9
Q ss_pred CcccceEEEEecCCc-----hhHHhhccCceEEEEEecCCCC-c-----------------------c------------
Q 045363 358 KKVKGKIVYCLGSGS-----QDYTIDRLQGAGTIVAVDAPTD-I-----------------------A------------ 396 (712)
Q Consensus 358 ~~~~gkivl~~~~~~-----~~~~~~~~Ga~g~i~~~~~~~~-~-----------------------~------------ 396 (712)
.+++|||||+.++.| .. ++..+||.|+|++++.... . +
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~-~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVA-NAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHH-HHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred cccCCcEEEEecCCCCHHHHHH-HHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 579999999999987 55 8899999999999875310 0 0
Q ss_pred -cceeeeEEEeChhhHHHHHHHHh
Q 045363 397 -IATLIAGTFVVPEVGIKIDQYIN 419 (712)
Q Consensus 397 -~~~~~p~~~i~~~~g~~l~~~~~ 419 (712)
..-.||++.|+.++++.|+..+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999988664
No 53
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=81.27 E-value=8 Score=37.40 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=54.2
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEEEEc----C-C-c
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLEWSD----T-K-H 696 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~~----~-~-~ 696 (712)
..+.+++++|.|+.+.+++... .|+.+++...|. .+ .+|++.+++|+++......-+...+.|++.. + . .
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~--~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~ 95 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAF--RL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKA 95 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEE--EE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEE
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEeeeCcc--ee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccc
Confidence 5566889999999998888643 366655544444 44 7899999999998887543455677777653 2 2 2
Q ss_pred EEEeeEEEE
Q 045363 697 SVKSPILVY 705 (712)
Q Consensus 697 ~v~~P~~~~ 705 (712)
..++|+...
T Consensus 96 ~~~i~v~g~ 104 (220)
T 2qsv_A 96 VDSVMVSLP 104 (220)
T ss_dssp EEEEEEEEE
T ss_pred ccEEEEEEE
Confidence 447776653
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=77.78 E-value=2.1 Score=49.12 Aligned_cols=63 Identities=14% Similarity=0.037 Sum_probs=49.2
Q ss_pred CCcccceEEEEecCCc-----hhHHhhccCceEEEEEecCC-----C------------------Cc------cc-----
Q 045363 357 MKKVKGKIVYCLGSGS-----QDYTIDRLQGAGTIVAVDAP-----T------------------DI------AI----- 397 (712)
Q Consensus 357 ~~~~~gkivl~~~~~~-----~~~~~~~~Ga~g~i~~~~~~-----~------------------~~------~~----- 397 (712)
..+++|||||++++.+ .. +++.+||.|+|++++.. + .+ .+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~-~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG 228 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVK-NAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPG 228 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHH-HHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTT
T ss_pred CCCCCCeEEEEECCCCCHhHHHH-HHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCC
Confidence 4579999999999987 66 89999999999998521 0 00 00
Q ss_pred -----------------ceeeeEEEeChhhHHHHHHHHhc
Q 045363 398 -----------------ATLIAGTFVVPEVGIKIDQYINS 420 (712)
Q Consensus 398 -----------------~~~~p~~~i~~~~g~~l~~~~~~ 420 (712)
.-.||++.|+..+++.|+..+..
T Consensus 229 ~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 229 YPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp SCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 13689999999999999987754
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=71.59 E-value=18 Score=31.78 Aligned_cols=51 Identities=16% Similarity=0.096 Sum_probs=36.3
Q ss_pred eEEEEEEEEEcCCCC-eeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEec
Q 045363 623 SAIFRRTVTNVGFAK-SLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~-~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
..+++.||+|.|..+ ..|++.+.. .|..+.-. .+.+ ++|++++|+++....
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~~ 85 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTPT 85 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECCS
T ss_pred EEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEcC
Confidence 889999999999754 778877654 44444322 3355 788999988887643
No 56
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=68.58 E-value=8.5 Score=44.40 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=43.0
Q ss_pred CCCCceeeeecCC--CceeEEEEEEEEEcCCCCeeEEEEE--eCCCC-c----EEEEeeceE-EeecCCcEEEEEEEEEe
Q 045363 607 LNYPSMHFHFTNE--SSISAIFRRTVTNVGFAKSLYKATV--HSPKG-L----SVTVSPRVL-TFSRSQQTRSFTVLVKG 676 (712)
Q Consensus 607 ln~ps~~~~~~~~--~~~~~~~~rtv~n~~~~~~ty~~~~--~~~~g-~----~v~v~p~~~-~~~~~~~~~~~~vt~~~ 676 (712)
|.|-.|...++.- .....+++++|||+|+....-.+.+ ..|.+ + +.-+-=..+ .+ ++||+++++++++.
T Consensus 598 LSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~ 676 (721)
T 2x41_A 598 LSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPV 676 (721)
T ss_dssp BCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEG
T ss_pred CCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECH
Confidence 7787777665421 1126899999999998764444433 33322 1 000001123 33 79999999999997
Q ss_pred cc
Q 045363 677 SM 678 (712)
Q Consensus 677 ~~ 678 (712)
.+
T Consensus 677 ~~ 678 (721)
T 2x41_A 677 RD 678 (721)
T ss_dssp GG
T ss_pred HH
Confidence 65
No 57
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=68.18 E-value=54 Score=31.41 Aligned_cols=89 Identities=8% Similarity=0.051 Sum_probs=54.4
Q ss_pred CceeeeecCCCceeEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCC-e--EE
Q 045363 610 PSMHFHFTNESSISAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGAS-I--LS 686 (712)
Q Consensus 610 ps~~~~~~~~~~~~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~--~~ 686 (712)
..+-++... + ...+.+.+++|.|+.+...+-....-....+.... -.+ ++||+.++.|+++..... +. | ..
T Consensus 124 ~~~dfG~i~-g-~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~~--~~i-~PGe~~~i~v~~~~~~~~-g~~~~~~~ 197 (220)
T 2qsv_A 124 TYLDMGQLD-G-ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDR--TEI-KPGGSTLLRIAVDPQVMK-AEGWQSIA 197 (220)
T ss_dssp CEEEEEECT-T-SCEEEEEEEEECSSSCEEEEEEEECSTTEEEEESC--SEE-CTTCEEEEEEEECHHHHH-HTTCSEEE
T ss_pred eEEeeeccC-C-CeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecCC--ccC-CCCCEEEEEEEEecCCCC-Ccccceec
Confidence 455555555 3 27788899999999887765333333445554433 345 799999999999887532 22 1 45
Q ss_pred EEEEEE-c--CCcEEEeeEEE
Q 045363 687 ALLEWS-D--TKHSVKSPILV 704 (712)
Q Consensus 687 G~i~~~-~--~~~~v~~P~~~ 704 (712)
..|+.. + ....+++.+-+
T Consensus 198 ~~i~v~~N~~~~p~~~l~i~~ 218 (220)
T 2qsv_A 198 ADISIICNDPQAPLRRIKVKA 218 (220)
T ss_dssp EEEEEEESCTTCSEEEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEEEE
Confidence 666553 3 23445665543
No 58
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=67.60 E-value=17 Score=38.21 Aligned_cols=84 Identities=13% Similarity=0.020 Sum_probs=58.2
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcE----EEEeeceEEeecCCcEEEEEEEEEeccc------CCCCeEEEEEEEE
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLS----VTVSPRVLTFSRSQQTRSFTVLVKGSMQ------SGASILSALLEWS 692 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~----v~v~p~~~~~~~~~~~~~~~vt~~~~~~------~~~~~~~G~i~~~ 692 (712)
..+-++|++|+|..+.+|++.-...+... ++++|..-.+ .+|++++++|++..... ....-.+--|++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 67778899999999999999654332222 7788998888 78999999999987651 0122334455553
Q ss_pred -cCCcEEEeeEEEEec
Q 045363 693 -DTKHSVKSPILVYKQ 707 (712)
Q Consensus 693 -~~~~~v~~P~~~~~~ 707 (712)
++.....+|+-+.+.
T Consensus 126 ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 126 LDRGKDYFLTISGNYL 141 (366)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred EeCCCcEEEEeccccC
Confidence 456666777666554
No 59
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=67.29 E-value=17 Score=41.74 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=35.5
Q ss_pred eEEEEEEEEEcCCCCeeEEEEE--eCCCCc------EEEEeeceEEeecCCcEEEEEEEEEecc
Q 045363 623 SAIFRRTVTNVGFAKSLYKATV--HSPKGL------SVTVSPRVLTFSRSQQTRSFTVLVKGSM 678 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~--~~~~g~------~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 678 (712)
..+++++|||+|+....-.+++ ..|.+. ++.- =..+.+ ++||+++++++++...
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHHH
Confidence 5789999999998776555554 333221 1110 123344 7999999999999765
No 60
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=62.93 E-value=24 Score=41.27 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=85.5
Q ss_pred ceEeeecccchhHHHHHHHHHHHhhCCCCC-HHHHHHHHHccccCCCCCCCC-CCCCCCCCCcCccccC--CCC-eeeec
Q 045363 490 PFNILSGTSMACPHAAAAAAYVKSFHPDWS-PAAIKSALMTTATPMKTKSDD-AELASGSGQINPTKAV--HPG-LIYDL 564 (712)
Q Consensus 490 ~y~~~sGTSmAaP~VAG~aALl~~~~P~ls-p~~ik~~L~~TA~~~~~~~~~-~~~~~G~G~in~~~A~--~~~-lv~~~ 564 (712)
-...++|..++-|.+.-+.|+|..++|.-- ...|-++|.--..|-... |+ .+...+- +=...-. ..+ ..|..
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkL-P~T~p~~~~d--~P~~~~~~~~~g~~~y~e 694 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKL-SLSWPFKLQD--NPAFLNFKTEFGRVIYGE 694 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCC-SSCBCSSGGG--STTTTSCSCBTTEEECTT
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCC-ceeeeCchhh--CCccccCCCCCCceeccC
Confidence 356788888888888888889999998765 677888887766664433 11 1111110 0000000 011 11221
Q ss_pred Cc-chhhhhhccCCCCccceeeecccccccccCCCCCCCCCCCCCCCceeee--ecC--CCceeEEEEEEEEEcC-CCCe
Q 045363 565 NL-SSYTRFLCKEGYNSTAIGRLIGRKKKLNCSTIRPAQGLDGLNYPSMHFH--FTN--ESSISAIFRRTVTNVG-FAKS 638 (712)
Q Consensus 565 ~~-~dy~~~lc~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~--~~~--~~~~~~~~~rtv~n~~-~~~~ 638 (712)
.. -+|.-|. .. .. .+.-.... ||.|-.|... ++. .+ ..+++++|||+| +...
T Consensus 695 g~~vgYR~y~------~~------------~~-~plfPFG~-GLSYTtF~ys~~~l~v~~~--~~~v~v~V~NtG~~~~G 752 (845)
T 3abz_A 695 DIFVGYRYYE------KL------------QR-KVAFPFGY-GLSYTTFELDISDFKVTDD--KIAISVDVKNTGDKFAG 752 (845)
T ss_dssp TTCCTHHHHH------HH------------TC-CCSBCTTC-CBCSSCEEEEEEEEEECSS--EEEEEEEEEECCSSCCE
T ss_pred CccCCCcchh------cC------------CC-ceeecccC-CCcceeEEEecccccccCC--eEEEEEEEEECCcCCCc
Confidence 10 1122110 00 00 00000112 3888888877 543 23 789999999999 7665
Q ss_pred eEEEEE--eCCCC-c-----EEEEeeceEEeecCCcEEEEEEEEE-ecc
Q 045363 639 LYKATV--HSPKG-L-----SVTVSPRVLTFSRSQQTRSFTVLVK-GSM 678 (712)
Q Consensus 639 ty~~~~--~~~~g-~-----~v~v~p~~~~~~~~~~~~~~~vt~~-~~~ 678 (712)
.-.+.+ ..|.+ + ++.- =..+.+ ++||+++++++++ ...
T Consensus 753 ~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~~ 799 (845)
T 3abz_A 753 SEVVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNIDLELKDA 799 (845)
T ss_dssp EEEEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEEEEEHHHH
T ss_pred ceeeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEEEeCChHH
Confidence 554443 22221 1 1111 123344 7999999999999 544
No 61
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=61.36 E-value=22 Score=30.56 Aligned_cols=57 Identities=9% Similarity=0.020 Sum_probs=43.1
Q ss_pred EEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCe
Q 045363 625 IFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASI 684 (712)
Q Consensus 625 ~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~ 684 (712)
+-+.+++|.++....|+++...|.-.. |.|..=.+ .+|++.++.|+........+.+
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~~~~k~DKf 82 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFV-DAKGKSKLDINRLPGPPKEDKI 82 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEE-CTTCEEEEEEEECSCCSCEEEE
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEE-CCCCeEEEEEEeCCCCCCCCEE
Confidence 456788999999999999988777554 67776555 7899999999998754333333
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=58.06 E-value=25 Score=31.78 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=42.6
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEec
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
.++-.++|+|.++...-|++...+|.- ..|.|..=.+ .++++.++.|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 445578999999999999999888875 4567887666 789999999999864
No 63
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=57.67 E-value=58 Score=28.11 Aligned_cols=67 Identities=15% Similarity=0.108 Sum_probs=41.2
Q ss_pred eEEEEEEEEEcCCCCee--------EEEEEeCCCCcEEE---------EeeceEEeecCCcEEEEEEEEEecccCCCCeE
Q 045363 623 SAIFRRTVTNVGFAKSL--------YKATVHSPKGLSVT---------VSPRVLTFSRSQQTRSFTVLVKGSMQSGASIL 685 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~t--------y~~~~~~~~g~~v~---------v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 685 (712)
...|+.+|+|.++.+.+ |.+.+...+|-.|- --....++ ++||+++|+.+.+....+....+
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~~pG~Ytl 97 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVPEPGTYEV 97 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCCCSEEEEE
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCCCCccEEE
Confidence 88999999999976544 44445444443332 11224456 79999999999994222223345
Q ss_pred EEEEE
Q 045363 686 SALLE 690 (712)
Q Consensus 686 ~G~i~ 690 (712)
.+++.
T Consensus 98 ~a~l~ 102 (120)
T 3isy_A 98 KVTFK 102 (120)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66654
No 64
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=57.31 E-value=26 Score=29.75 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=40.9
Q ss_pred EEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecc
Q 045363 625 IFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSM 678 (712)
Q Consensus 625 ~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 678 (712)
+-+.+++|.++....|+++...|.-.. |.|..=.+ .+|++.++.|+.....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~~ 68 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAGA 68 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSCC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCCC
Confidence 356789999999999999988877554 67777666 7899999999988743
No 65
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=56.62 E-value=34 Score=29.72 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=42.9
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEec
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
.++-.++++|.++...-|+++..+|.- ..|.|..=.+ .++++.++.|++...
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 567778999999999999999888864 5567887666 789999999999864
No 66
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=55.14 E-value=33 Score=30.75 Aligned_cols=52 Identities=13% Similarity=0.152 Sum_probs=42.6
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEec
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
.++-.++|+|.++...-|+++..+|.-. .|.|..=.+ .++++..+.|++...
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSE--EEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccE--EEcCCCcEE-CCCCeEEEEEEECCC
Confidence 4556788999999999999999888754 467887556 789999999999874
No 67
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=54.49 E-value=71 Score=35.50 Aligned_cols=79 Identities=9% Similarity=-0.035 Sum_probs=49.3
Q ss_pred CCCceeeeecCCCceeEEEEEEEEEcCCCCeeE-EEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEE
Q 045363 608 NYPSMHFHFTNESSISAIFRRTVTNVGFAKSLY-KATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILS 686 (712)
Q Consensus 608 n~ps~~~~~~~~~~~~~~~~rtv~n~~~~~~ty-~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~ 686 (712)
..|.+++... + +.+++.+|+|.+..+..- ++++..+.+.+++. ....+ ++|++.++.++|+.+.....+.+.
T Consensus 363 ~~~~~~~~~g--~--~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y~ 435 (601)
T 1w8o_A 363 TIPDVALEPG--Q--QVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRYR 435 (601)
T ss_dssp ECCCEEECTT--C--EEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEEE
T ss_pred cCccceecCC--c--eeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcEE
Confidence 3456665533 3 889999999976533222 34456688888776 34455 678999998888887543333444
Q ss_pred EEEEEEc
Q 045363 687 ALLEWSD 693 (712)
Q Consensus 687 G~i~~~~ 693 (712)
=-+.+..
T Consensus 436 l~~~~~~ 442 (601)
T 1w8o_A 436 VGATLRT 442 (601)
T ss_dssp EEEEEEE
T ss_pred eeEEEEe
Confidence 3445544
No 68
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=51.22 E-value=36 Score=29.65 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=42.1
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEec
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
..+-..+|+|.++...-|+++..+|.-. .|.|..=.+ .++++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecCC
Confidence 3445678999999999999999888755 467887666 789999999998873
No 69
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=38.17 E-value=7.3 Score=33.76 Aligned_cols=54 Identities=28% Similarity=0.238 Sum_probs=34.1
Q ss_pred eEEEEEEEEEcCCCCeeEEE--EEe-CCCCcEEEEeeceEEee-cCCcEEEEEEEEEecc
Q 045363 623 SAIFRRTVTNVGFAKSLYKA--TVH-SPKGLSVTVSPRVLTFS-RSQQTRSFTVLVKGSM 678 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~--~~~-~~~g~~v~v~p~~~~~~-~~~~~~~~~vt~~~~~ 678 (712)
.......++|.+ ..+|++ .+. .|+|++++++|..+++. ..-.+++|.|++....
T Consensus 54 ~i~~~vDLs~l~--~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 54 SYEVFVDLTEAG--EGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CCEEEEECTTCC--BEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred CEEEEEECccCC--CCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 344455555654 345544 455 58899999999988776 3345667776665543
No 70
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=33.21 E-value=1.5e+02 Score=25.18 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=17.2
Q ss_pred eEEEEEEEEEcCCC-CeeEEEEEe
Q 045363 623 SAIFRRTVTNVGFA-KSLYKATVH 645 (712)
Q Consensus 623 ~~~~~rtv~n~~~~-~~ty~~~~~ 645 (712)
..+|+.+|+|.|.. ...+++.+.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEE
Confidence 88999999999974 344665543
No 71
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=32.03 E-value=3.4e+02 Score=26.54 Aligned_cols=83 Identities=8% Similarity=0.016 Sum_probs=50.0
Q ss_pred eEEEEEEEEEcCCCCeeEEEE--EeCCC--------CcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEEEE
Q 045363 623 SAIFRRTVTNVGFAKSLYKAT--VHSPK--------GLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLEWS 692 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~--~~~~~--------g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~~~ 692 (712)
+...+++|+|.++. .|-+. ++..+ ..-+.++|..+.+ ++|+++.+.|.......+.+...-=+|.+.
T Consensus 43 ~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~DrESlf~lnv~ 119 (257)
T 3q48_A 43 EREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDRESLFWLNIL 119 (257)
T ss_dssp CSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSSCEEEEEEEE
T ss_pred CcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCceeEEEEEee
Confidence 45678899998865 45443 33211 2348899999999 689999999976654333333221123322
Q ss_pred c------C-C------cEEEeeEEEEecC
Q 045363 693 D------T-K------HSVKSPILVYKQF 708 (712)
Q Consensus 693 ~------~-~------~~v~~P~~~~~~~ 708 (712)
+ . . -.-|+|+.+++..
T Consensus 120 eIPp~~~~~~n~Lqiair~rIKLFyRP~~ 148 (257)
T 3q48_A 120 EVPPRDEDENNALQFSFRSRFKLFFRPSQ 148 (257)
T ss_dssp EECCC---------CCEEEEEEEEEECTT
T ss_pred ecCCCCCCCCceEEEEEEEEEEEEEeccc
Confidence 2 1 1 2357888877653
No 72
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=30.44 E-value=22 Score=26.54 Aligned_cols=29 Identities=14% Similarity=0.240 Sum_probs=23.5
Q ss_pred HHHHHHHHhhCCCCCHHHHHHHHHccccC
Q 045363 505 AAAAAYVKSFHPDWSPAAIKSALMTTATP 533 (712)
Q Consensus 505 AG~aALl~~~~P~lsp~~ik~~L~~TA~~ 533 (712)
--....|++.+|+++...|+..|...-..
T Consensus 10 ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 10 EEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 34567899999999999999999875433
No 73
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=26.73 E-value=46 Score=30.14 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=27.0
Q ss_pred eeecccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 045363 493 ILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKS 525 (712)
Q Consensus 493 ~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~ 525 (712)
.+.|-| =|+.|-|++|||.+.+-..+|++|.+
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 344555 47999999999999999999999865
No 74
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=26.69 E-value=4.2e+02 Score=27.58 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=40.6
Q ss_pred eEEEEEEEEEcCCCCee---EE---EEEeC----------C------CCcEEEEeeceEEeecCCcEEEEEEEEEecc--
Q 045363 623 SAIFRRTVTNVGFAKSL---YK---ATVHS----------P------KGLSVTVSPRVLTFSRSQQTRSFTVLVKGSM-- 678 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~t---y~---~~~~~----------~------~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~-- 678 (712)
+.+++.+|||.|+++.. |+ +.... | .| ++ +|+ -+ .+||+++++|+++...
T Consensus 299 ~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~da~We 372 (419)
T 3rfr_A 299 ELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQDARWD 372 (419)
T ss_dssp EEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEECHHHH
T ss_pred EEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeehHHHH
Confidence 88999999999987643 22 11111 1 24 33 555 45 7999999999888643
Q ss_pred --------cCCCCeEEEEEEEEc
Q 045363 679 --------QSGASILSALLEWSD 693 (712)
Q Consensus 679 --------~~~~~~~~G~i~~~~ 693 (712)
...+...-|-|.|.|
T Consensus 373 veRL~~l~~D~dSrfgGLLfF~d 395 (419)
T 3rfr_A 373 IERLSDLAYDTDSQVGGLLFFFT 395 (419)
T ss_dssp HTTGGGGGGSSSCEEEEEEEEEC
T ss_pred HHHHhhhhcCchhheeEEEEEEc
Confidence 122445455556666
No 75
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=26.43 E-value=2.8e+02 Score=23.11 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=22.0
Q ss_pred eEEEEEEEEEcCCCC-eeEEEEEeCCCCcEE
Q 045363 623 SAIFRRTVTNVGFAK-SLYKATVHSPKGLSV 652 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~-~ty~~~~~~~~g~~v 652 (712)
-.+.+++|+|.+..+ ..|++++.-|.|.+|
T Consensus 16 Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~i 46 (107)
T 3ndz_E 16 GASVNVTIKNNGTTPINGWTLKWTMPINQTI 46 (107)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEE
T ss_pred CEEEEEEEEeCCCCcccCcEEEEEcCCCCEE
Confidence 466778999998655 458888887766544
No 76
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=24.21 E-value=3.1e+02 Score=22.76 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=42.7
Q ss_pred ceeeeecCCCceeEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEEeeceEEeecCCcEEEEEEEEEecccCCCCeEEEEEE
Q 045363 611 SMHFHFTNESSISAIFRRTVTNVGFAKSLYKATVHSPKGLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGASILSALLE 690 (712)
Q Consensus 611 s~~~~~~~~~~~~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~~G~i~ 690 (712)
.+++.+.. . ...+++||+|.......|.=....|. .+++ .+ ...++-+++|.+... ..++.|..+
T Consensus 35 vlsV~F~~-~--~~~vTItItNe~TG~~VYs~~~s~p~--~i~I-----dL-nge~sG~Y~IeI~~~----~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGR-A--KDYAIITVTNKATGEIVHSKTYHNTS--IVMI-----DM-SSCEKGEYTIHIILN----DCLLEGTFT 99 (101)
T ss_dssp EEEEEESS-C--CSCEEEEEEETTTCCEEEEEEESSCS--EEEE-----EC-TTSCSEEEEEEEEET----TEEEEEEEE
T ss_pred EEEEEecc-C--CCcEEEEEEECCCCcEEEEEeccCCc--EEEE-----Ec-CCCcCceEEEEEEeC----CcEEEEEEE
Confidence 56666654 3 56788999998777888987776544 2322 22 233567777777765 356777655
Q ss_pred E
Q 045363 691 W 691 (712)
Q Consensus 691 ~ 691 (712)
.
T Consensus 100 i 100 (101)
T 3sd2_A 100 V 100 (101)
T ss_dssp E
T ss_pred e
Confidence 3
No 77
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=23.94 E-value=1.1e+02 Score=25.75 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=18.5
Q ss_pred CCCcEEEEeeceEEeecCCc-EEEEEEEEEecc
Q 045363 647 PKGLSVTVSPRVLTFSRSQQ-TRSFTVLVKGSM 678 (712)
Q Consensus 647 ~~g~~v~v~p~~~~~~~~~~-~~~~~vt~~~~~ 678 (712)
..|........+|+| ++|| +++++|.+....
T Consensus 47 ~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD~ 78 (114)
T 3e9t_A 47 SAGTDFVGRKGLLSF-PPGVDEQRFRIEVIDDD 78 (114)
T ss_dssp CBTTTBCCCEEEEEE-CTTCCEEEEEEEBCCCS
T ss_pred CCCCCceEcceEEEE-eCCcEEEEEEEEEEcCC
Confidence 445555555678999 4565 466666655443
No 78
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=23.82 E-value=3.5e+02 Score=25.68 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=38.7
Q ss_pred eEEEEEEEEEcCCCCeeEEEEEeCC---C--CcEEEEeeceEEeecCCcEEEEEEEEEecccCCCC
Q 045363 623 SAIFRRTVTNVGFAKSLYKATVHSP---K--GLSVTVSPRVLTFSRSQQTRSFTVLVKGSMQSGAS 683 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ty~~~~~~~---~--g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 683 (712)
....+++|+|.++.+....+-++.. . ..-+.++|..+.+ .+|+++.++|.......+.+.
T Consensus 27 ~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DR 91 (218)
T 4ay0_A 27 AAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDK 91 (218)
T ss_dssp CSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSS
T ss_pred CcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCc
Confidence 4566788899876543333334321 1 2237789999999 689999999977655444333
No 79
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=22.54 E-value=45 Score=29.70 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=28.1
Q ss_pred EeeecccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 045363 492 NILSGTSMACPHAAAAAAYVKSFHPDWSPAAIKS 525 (712)
Q Consensus 492 ~~~sGTSmAaP~VAG~aALl~~~~P~lsp~~ik~ 525 (712)
..+.|-| =|+.|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4566666 47999999999999999999999865
No 80
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=22.03 E-value=1.6e+02 Score=24.38 Aligned_cols=16 Identities=31% Similarity=0.162 Sum_probs=13.0
Q ss_pred eEEEEEEEEEcCCCCe
Q 045363 623 SAIFRRTVTNVGFAKS 638 (712)
Q Consensus 623 ~~~~~rtv~n~~~~~~ 638 (712)
..+++++|+|.|+.+.
T Consensus 19 r~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 19 RATCRVVVENHGDRPI 34 (101)
T ss_dssp CCEEEEEEEECSSSCE
T ss_pred CCEEEEEEEeCCCcce
Confidence 5678899999998763
No 81
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=21.99 E-value=3.1e+02 Score=26.62 Aligned_cols=65 Identities=8% Similarity=0.065 Sum_probs=41.2
Q ss_pred CCCCceeeeecCCCceeEEEEEEEEEcCCCCeeEEEEEeCCCCcEEEE-----eeceEEeecCCcEEEEEEEEEec
Q 045363 607 LNYPSMHFHFTNESSISAIFRRTVTNVGFAKSLYKATVHSPKGLSVTV-----SPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 607 ln~ps~~~~~~~~~~~~~~~~rtv~n~~~~~~ty~~~~~~~~g~~v~v-----~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
+|+|...... . ...+..+|-|..+.....++.+...+++.... ....+.+ ++++++++.+.+.+.
T Consensus 86 ~~LP~sv~rG---E--~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 86 LQMPYSVVKN---E--QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVPL 155 (252)
T ss_dssp ECCCSCEETT---C--CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred cCCCcEEeeC---C--EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEec
Confidence 7778654432 3 67888899999888777777776655443221 1223555 566777777766653
No 82
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=20.64 E-value=2.1e+02 Score=33.75 Aligned_cols=65 Identities=9% Similarity=0.058 Sum_probs=47.1
Q ss_pred CCCCceeeeecCCCceeEEEEEEEEEcCC-CCeeEEEEEeCCCCcEEEE-----eeceEEeecCCcEEEEEEEEEec
Q 045363 607 LNYPSMHFHFTNESSISAIFRRTVTNVGF-AKSLYKATVHSPKGLSVTV-----SPRVLTFSRSQQTRSFTVLVKGS 677 (712)
Q Consensus 607 ln~ps~~~~~~~~~~~~~~~~rtv~n~~~-~~~ty~~~~~~~~g~~v~v-----~p~~~~~~~~~~~~~~~vt~~~~ 677 (712)
+|+|-+.... . ...+..+|.|..+ ...++++++...+++.+.- ....+.+ ++++++++.+.|.+.
T Consensus 85 ~~LP~~v~~G---D--~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 85 LRLPYSVVRN---E--QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTI-PPKSSLSVPYVIVPL 155 (915)
T ss_dssp EECCSEEETT---C--CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred ccCCCEEecC---c--EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEE-CCCCeEEEEEEEEEC
Confidence 7788654332 3 7888899999999 8899999988776654321 1346677 678888888888864
Done!