BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045369
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2
PE=1 SV=1
Length = 233
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 70/114 (61%), Gaps = 18/114 (15%)
Query: 5 FAAVMDTVTTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSSAAAS 62
+ + +T+T YTGLSPAAFFT+LAL VY+ V FV PE P L+ + S
Sbjct: 6 WETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP---- 61
Query: 63 AATAANFSNQTVIPETVQLGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSR 116
+P VQLGE+TE EL+ YDGSD KPLLMAIKGQIYDVS+SR
Sbjct: 62 ------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSR 103
>sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1
PE=1 SV=2
Length = 220
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query: 2 VAFFAAVMDTVTTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAA 61
+ + + + + YTGLSP FFT LAL +Y+ + F P +D+ + S A
Sbjct: 3 LELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPF--DDVNRHQRARSLAQ 60
Query: 62 SAATAANFSNQTVIPETVQLGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSR 116
+ IP+ VQ+GE+TE EL+ YDGSDP KPLLMAIK QIYDV++SR
Sbjct: 61 E--------EEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSR 107
>sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3
PE=1 SV=1
Length = 100
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 83 EVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSR 116
E T +L Y+G+D +KP+ +AIKG+++DV+ +
Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGK 35
>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus
norvegicus GN=Pgrmc1 PE=1 SV=3
Length = 195
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 63 AATAANFSNQTVIPETVQLGEVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
A+ N ++ ++ + T ELR YDG DP +LMAI G+++DV++ R
Sbjct: 52 GASGDNDDDEPPPLPRLKPRDFTPAELRRYDGVQDPR--ILMAINGKVFDVTKGR 104
>sp|Q1JQA5|NENF_BOVIN Neudesin OS=Bos taurus GN=NENF PE=2 SV=1
Length = 169
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRH 117
TE EL Y G + ++P+ MA+KG ++DV+ +
Sbjct: 45 TEEELARYGGEEEDQPIYMAVKGVVFDVTSGKE 77
>sp|A2CES0|NEUFC_DANRE Neuferricin OS=Danio rerio GN=cyb5d2 PE=3 SV=1
Length = 267
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 84 VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSR 116
+T+ +L Y+G +K L +AI GQ++DV + R
Sbjct: 54 LTKEQLSLYNGGKNSKGLYLAILGQVFDVEKGR 86
>sp|Q9UMX5|NENF_HUMAN Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1
Length = 172
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRH 117
TE EL Y G + ++P+ +A+KG ++DV+ +
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKE 80
>sp|Q9CQ45|NENF_MOUSE Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1
Length = 171
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRH 117
TE EL Y G + ++P+ +A+KG ++DV+ +
Sbjct: 47 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKE 79
>sp|Q6IUR5|NENF_RAT Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1
Length = 171
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRH 117
TE EL Y G + ++P+ +A+KG ++DV+ +
Sbjct: 47 TEEELARYSGEEEDQPIYLAVKGVVFDVTSGKE 79
>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus
GN=PGRMC1 PE=2 SV=3
Length = 194
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 83 EVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
+ T ELR +DG DP +LMAI G+++DV++ R
Sbjct: 71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGR 103
>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus
musculus GN=Pgrmc1 PE=1 SV=4
Length = 195
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 63 AATAANFSNQTVIPETVQLGEVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
A+ N ++ ++ + T ELR +DG DP +LMAI G+++DV++ R
Sbjct: 52 GASGDNDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGR 104
>sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo
abelii GN=PGRMC1 PE=2 SV=3
Length = 195
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 83 EVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
+ T ELR +DG DP +LMAI G+++DV++ R
Sbjct: 72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGR 104
>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa
GN=PGRMC1 PE=1 SV=3
Length = 194
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 83 EVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
+ T ELR +DG DP +LMAI G+++DV++ R
Sbjct: 71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGR 103
>sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo
sapiens GN=PGRMC1 PE=1 SV=3
Length = 195
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 83 EVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSR 116
+ T ELR +DG DP +LMAI G+++DV++ R
Sbjct: 72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGR 104
>sp|Q28FI8|NEUFC_XENTR Neuferricin OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1
Length = 273
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 74 VIPETVQLGE---VTEHELRAYDGSDPNKPLLMAIKGQIYDVSR-SRH 117
+ P+ +L E +++ EL YDG + + +AI GQ++DV + S+H
Sbjct: 34 IFPQQCELSEGRLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKH 81
>sp|Q9W376|NEUFC_DROME Neuferricin homolog OS=Drosophila melanogaster GN=CG12056 PE=2 SV=1
Length = 287
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 21/97 (21%)
Query: 24 FTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTVIPETVQLGE 83
F + A++ +Y T F+ + N L + AS IP Q G+
Sbjct: 15 FVVAAVLGGIYHTEIRQFLRRQT----DNYLDQAGQDAS------------IPLAFQAGD 58
Query: 84 -----VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115
T EL ++G + +PL +A+ G ++DVSR
Sbjct: 59 DIGTLFTPAELAKFNGEEEGRPLYLALLGSVFDVSRG 95
>sp|Q12091|DAP1_YEAST Damage response protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DAP1 PE=1 SV=1
Length = 152
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 61 ASAATAANFSNQTVIPETVQLGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRH 117
+ A+ N SN+ P V G L ++G D K + +AI+G++YD +R R
Sbjct: 23 GNGASNTNDSNKGSEP--VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQ 76
>sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus
gallus GN=PGRMC1 PE=2 SV=3
Length = 192
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 83 EVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRS 115
+ T +LR YDG DP +LMA+ G+++DV+R+
Sbjct: 70 DFTLEQLRPYDGVRDPR--ILMAVNGKVFDVTRA 101
>sp|Q60YT6|NEUFC_CAEBR Neuferricin homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1
Length = 326
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDV 112
T +L +DGS +KP +AI G++YDV
Sbjct: 102 TPEQLHFFDGSRDSKPCYLAILGRVYDV 129
>sp|P23669|THRC_CORGL Threonine synthase OS=Corynebacterium glutamicum (strain ATCC 13032
/ DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=thrC
PE=1 SV=2
Length = 481
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 37 VCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTVIP-----ETVQLGEVTEHELRA 91
V S+FVD P ED+K + A A T F+++ ++P + + LG ++E A
Sbjct: 63 VISLFVDDIPVEDIK------AITARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAA 116
Query: 92 YDGSDPNKPLLMAIKGQIYDVSRSRH 117
+ K + M + G++++ R
Sbjct: 117 F------KDMAMQLLGELFEYELRRR 136
>sp|Q08787|SRFAC_BACSU Surfactin synthase subunit 3 OS=Bacillus subtilis (strain 168)
GN=srfAC PE=1 SV=2
Length = 1275
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 26 ILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTV-IP---ETVQL 81
++ ++ V+ + VDP+ PED + +++ SAAA T Q +P T+ +
Sbjct: 528 VIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFI 587
Query: 82 GEVTEHELRAYDGS---DPNKP 100
+ T E +A D + DPN P
Sbjct: 588 DDQTRFEEQASDPATAIDPNDP 609
>sp|Q6LHK5|MAO12_PHOPR NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=maeA2
PE=3 SV=1
Length = 558
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 33 VYKTVCSMFVDPEPPEDLKNKLISSSAAASAATAANFSNQTVIPETVQLGEVTEHELRAY 92
+Y+ ++++ P L+N L++ +A S NFS ++P ++ +TE E RAY
Sbjct: 1 MYENNKTLYLPYAGPTLLENALLNKGSAFSPEERQNFSLMGLLPAAIE--SITEQEERAY 58
>sp|Q02909|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Glycine
max GN=PPC16 PE=2 SV=1
Length = 967
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 43 DPEPPEDLKNKLISSSAAASAATAANFS---NQTVIPETVQLGEVTEHELRAYDGSDPN 98
DP+ E+L N + S A S A +FS N + E VQ+ ++L+ D +D N
Sbjct: 72 DPKKLEELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHSRRNKLKKGDFADEN 130
>sp|Q14596|NBR1_HUMAN Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=3
Length = 966
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 38 CSMFVDPEP----PEDLKNKLISSSAAASAATAANFSNQTVIPETVQLGEVTEH 87
CS+ VDP P P++++ +ISSS T + E QLGEVTE
Sbjct: 474 CSIIVDPFPSEESPDNIEKGMISSS-KTDDLTCQQEETFLLAKEERQLGEVTEQ 526
>sp|Q5RC94|NBR1_PONAB Next to BRCA1 gene 1 protein OS=Pongo abelii GN=NBR1 PE=2 SV=1
Length = 894
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 38 CSMFVDPEP----PEDLKNKLISSSAAASAATAANFSNQTVIPETVQLGEVTEH 87
CS+ VDP P P++++ +ISSS T + E QLGEVTE
Sbjct: 404 CSIIVDPFPSEESPDNIEKGMISSS-KTDDLTCQQEETFLLAKEERQLGEVTEQ 456
>sp|Q9AU12|CAPP_PHAVU Phosphoenolpyruvate carboxylase OS=Phaseolus vulgaris PE=2 SV=1
Length = 968
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 43 DPEPPEDLKNKLISSSAAASAATAANFS---NQTVIPETVQLGEVTEHELRAYDGSDPN 98
DP+ E+L N + S A S A +FS N + E VQ+ ++L+ D +D N
Sbjct: 72 DPKKLEELGNVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNKLKKGDFADEN 130
>sp|Q9XXA7|NEUFC_CAEEL Neuferricin homolog OS=Caenorhabditis elegans GN=tag-131 PE=3 SV=1
Length = 326
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDV 112
T +L +DG+ +KP+ +AI G++Y+V
Sbjct: 102 TPEQLHFFDGTRDSKPIYLAILGRVYNV 129
>sp|P51061|CAPP2_SOYBN Phosphoenolpyruvate carboxylase OS=Glycine max GN=PPC1 PE=2 SV=1
Length = 967
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 43 DPEPPEDLKNKLISSSAAASAATAANFS---NQTVIPETVQLGEVTEHELRAYDGSDPNK 99
DP+ E+L N + S A S A +FS N + E VQ+ ++L+ D +D N
Sbjct: 72 DPKKLEELGNLITSLDAGDSILVAKSFSHMLNLANLAEEVQISRRRRNKLKKGDFADENN 131
Query: 100 PLLMA-----IKGQIYDVSRS 115
+ +K ++D+ +S
Sbjct: 132 ATTESDIEETLKKLVFDLKKS 152
>sp|Q9CPE8|P5CR_PASMU Pyrroline-5-carboxylate reductase OS=Pasteurella multocida (strain
Pm70) GN=proC PE=3 SV=1
Length = 275
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 9 MDTVTTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASA 63
M T+T +G SPA FF + M + +C M +D ED L+ SA +A
Sbjct: 169 MHTITAGSGSSPAYFFLFMEAM---QQALCQMNMD----EDTARLLVQQSALGAA 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,062,127
Number of Sequences: 539616
Number of extensions: 1332419
Number of successful extensions: 4265
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4249
Number of HSP's gapped (non-prelim): 37
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)