Query 045369
Match_columns 117
No_of_seqs 170 out of 637
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 22:20:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j03_A Putative steroid bindin 99.2 1.1E-11 3.7E-16 86.6 3.5 34 82-115 3-36 (102)
2 2ibj_A Cytochrome B5, CYTB5; F 98.4 1.2E-07 4E-12 63.7 2.8 31 82-115 7-37 (88)
3 1x3x_A Cytochrome B5; hemoprot 98.4 1.2E-07 4.1E-12 63.0 2.5 31 82-115 4-34 (82)
4 3ner_A Cytochrome B5 type B; h 98.4 1.6E-07 5.6E-12 64.0 3.2 31 81-114 9-39 (92)
5 1cyo_A Cytochrome B5; electron 98.4 1.5E-07 5.2E-12 64.1 2.8 31 82-115 5-35 (93)
6 1cxy_A Cytochrome B5; helix, b 98.4 2.2E-07 7.5E-12 62.8 3.3 31 82-115 8-38 (90)
7 3lf5_A Cytochrome B5 reductase 98.4 1.5E-07 5.3E-12 63.6 2.5 31 81-114 5-35 (88)
8 1mj4_A Sulfite oxidase; cytoch 98.3 1.3E-07 4.4E-12 62.9 1.7 31 82-114 5-35 (82)
9 1hko_A Cytochrome B5; electron 98.2 5.1E-07 1.7E-11 62.9 3.0 31 81-114 8-38 (104)
10 2keo_A Probable E3 ubiquitin-p 98.1 6E-07 2.1E-11 63.5 0.8 31 81-114 23-53 (112)
11 1kbi_A Cytochrome B2, L-LCR; f 97.4 8.3E-05 2.8E-09 63.4 3.1 30 82-114 9-38 (511)
12 1jdm_A Sarcolipin; helix, memb 50.6 14 0.00047 20.5 2.5 20 20-39 9-28 (31)
13 1fjk_A Cardiac phospholamban; 35.4 37 0.0013 20.6 3.0 18 20-37 32-49 (52)
14 1oeg_A Apolipoprotein E; siali 27.5 42 0.0014 17.8 2.1 20 1-20 6-25 (26)
15 1tyg_B YJBS; alpha beta barrel 26.0 52 0.0018 21.4 2.8 27 84-111 37-63 (87)
16 1f0z_A THis protein; ubiquitin 25.7 68 0.0023 19.0 3.1 27 84-111 16-42 (66)
17 2l34_A TYRO protein tyrosine k 23.9 90 0.0031 17.1 3.1 10 17-26 3-12 (33)
18 2kl0_A Putative thiamin biosyn 22.9 60 0.0021 20.1 2.5 27 83-110 14-40 (73)
19 1ryj_A Unknown; beta/alpha pro 22.7 80 0.0027 19.1 3.1 27 84-111 24-50 (70)
20 3hhl_A RPA0582; alpha-beta-bar 20.2 44 0.0015 23.5 1.6 21 83-103 7-27 (143)
No 1
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.18 E-value=1.1e-11 Score=86.56 Aligned_cols=34 Identities=41% Similarity=0.809 Sum_probs=31.7
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecCC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~g 115 (117)
+.||.+||++|||.++++||||||+|+|||||.+
T Consensus 3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~ 36 (102)
T 1j03_A 3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTG 36 (102)
T ss_dssp CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGG
T ss_pred cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCC
Confidence 5799999999999987789999999999999976
No 2
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=98.41 E-value=1.2e-07 Score=63.72 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=27.9
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecCC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~g 115 (117)
+.||.+||+++|+.+ ++||+|+|+|||||.-
T Consensus 7 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f 37 (88)
T 2ibj_A 7 KYFTRAEVAKNNTKD---KNWFIIHNNVYDVTAF 37 (88)
T ss_dssp CEECHHHHHTSEETT---EEEEEETTEEEECGGG
T ss_pred CccCHHHHHHhCCCC---CEEEEECCEEEECCcc
Confidence 569999999999965 7999999999999963
No 3
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=98.39 E-value=1.2e-07 Score=62.98 Aligned_cols=31 Identities=16% Similarity=0.291 Sum_probs=27.8
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecCC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~g 115 (117)
+.||.+||+++|+.+ .+||+|+|+|||||.-
T Consensus 4 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f 34 (82)
T 1x3x_A 4 KKYTKEEVAKHNTQN---DLWIIYDGEVHDMTSF 34 (82)
T ss_dssp CEECHHHHHTCEETT---EEEEEETTEEEECGGG
T ss_pred CccCHHHHHhhCCCC---CEEEEECCEEEECCcc
Confidence 469999999999977 5999999999999963
No 4
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=98.39 E-value=1.6e-07 Score=63.98 Aligned_cols=31 Identities=26% Similarity=0.447 Sum_probs=28.1
Q ss_pred cCCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 81 LGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 81 ~~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
.+.||.+||+++|+.+ ++||+|+|+|||||.
T Consensus 9 ~~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~ 39 (92)
T 3ner_A 9 VTYYRLEEVAKRNSLK---ELWLVIHGRVYDVTR 39 (92)
T ss_dssp SCEECHHHHTTCEETT---EEEEEETTEEEECGG
T ss_pred CCeeCHHHHHhhCCCC---CEEEEECCEEEEccc
Confidence 3579999999999976 799999999999996
No 5
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=98.37 E-value=1.5e-07 Score=64.07 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=28.0
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecCC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~g 115 (117)
+.||.+||+++|+.+ ++||+|+|+|||||.-
T Consensus 5 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f 35 (93)
T 1cyo_A 5 KYYTLEEIQKHNNSK---STWLILHYKVYDLTKF 35 (93)
T ss_dssp CEECHHHHTTCEETT---EEEEEETTEEEECTTT
T ss_pred CccCHHHHHhhCCCC---CEEEEECCEEEECCCc
Confidence 469999999999976 6999999999999963
No 6
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=98.36 E-value=2.2e-07 Score=62.77 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=28.0
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecCC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRS 115 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~g 115 (117)
+.||.+||+++|+.+ ++||+|+|+|||||.-
T Consensus 8 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f 38 (90)
T 1cxy_A 8 PVFTLEQVAEHHSPD---DCWMAIHGKVYDLTPY 38 (90)
T ss_dssp CBCCHHHHTTCEETT---EEEEEETTEEEECTTT
T ss_pred CCcCHHHHHHhcCCC---CEEEEECCEEEECccc
Confidence 469999999999976 6999999999999963
No 7
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=98.36 E-value=1.5e-07 Score=63.64 Aligned_cols=31 Identities=42% Similarity=0.594 Sum_probs=28.1
Q ss_pred cCCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 81 LGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 81 ~~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
.+.||.+||+++|+.+ ++|++|+|+|||||.
T Consensus 5 l~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~ 35 (88)
T 3lf5_A 5 LIEVTEEELKKHNKKD---DCWICIRGFVYNVSP 35 (88)
T ss_dssp SEEECHHHHHHCEETT---EEEEEETTEEEECGG
T ss_pred CCEeCHHHHHhhCCCC---CEEEEECCEEEECcc
Confidence 3569999999999976 799999999999996
No 8
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=98.34 E-value=1.3e-07 Score=62.92 Aligned_cols=31 Identities=13% Similarity=0.342 Sum_probs=26.9
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
+.||.+|++++|+.+ + |+||+|+|+|||||.
T Consensus 5 ~~~t~~ev~~h~~~~-~-~~wv~i~g~VYDvt~ 35 (82)
T 1mj4_A 5 HIYTKEEVSSHTSPE-T-GIWVTLGSEVFDVTE 35 (82)
T ss_dssp CBCCCC-CTTCEETT-T-EEEEEETTEEEECTT
T ss_pred CccCHHHHHHhcCCC-C-CeEEEECCEEEEchH
Confidence 469999999999977 3 799999999999996
No 9
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=98.24 E-value=5.1e-07 Score=62.89 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=27.8
Q ss_pred cCCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 81 LGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 81 ~~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
.+.||.+||+++|+.+ ++||+|+|+|||||.
T Consensus 8 ~~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~ 38 (104)
T 1hko_A 8 VKYYTLEEIQKHNNSK---STWLILHYKVYDLTK 38 (104)
T ss_dssp CEEECHHHHHHCBSSS---SBEEEETTEEEEHHH
T ss_pred CCccCHHHHHHhcCCC---CEEEEECCEEEECCc
Confidence 3569999999999976 699999999999985
No 10
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=98.09 E-value=6e-07 Score=63.52 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=27.8
Q ss_pred cCCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 81 LGEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 81 ~~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
.+.||.+||+++|+.+ ++||+|+|+|||||.
T Consensus 23 ~~~~t~~Ev~~h~~~~---d~wvvi~G~VYDVT~ 53 (112)
T 2keo_A 23 VTLVRIADLENHNNDG---GFWTVIDGKVYDIKD 53 (112)
T ss_dssp CCEECHHHHHHHHHHT---CCEEEETTEEEEHHH
T ss_pred CCccCHHHHHHhcCCC---CEEEEECCEEEECCc
Confidence 4579999999999966 699999999999984
No 11
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.37 E-value=8.3e-05 Score=63.37 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=27.6
Q ss_pred CCCCHHHHhhccCCCCCCCeEEEECCeEEEecC
Q 045369 82 GEVTEHELRAYDGSDPNKPLLMAIKGQIYDVSR 114 (117)
Q Consensus 82 ~~fT~eeL~~ydG~d~~~pi~lAi~G~VYDVt~ 114 (117)
+.||.+|+++||+.+ ++||.|+|+|||||.
T Consensus 9 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvt~ 38 (511)
T 1kbi_A 9 QKISPAEVAKHNKPD---DCWVVINGYVYDLTR 38 (511)
T ss_dssp CCBCTTHHHHCEETT---EEEEEETTEEEECTT
T ss_pred CccCHHHHHHhCCCC---CEEEEECCEEEECCc
Confidence 579999999999977 699999999999996
No 12
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=50.60 E-value=14 Score=20.45 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 045369 20 PAAFFTILALMCVVYKTVCS 39 (117)
Q Consensus 20 p~~~~tila~~~~vY~~v~~ 39 (117)
..+|-.+++.++++|.++++
T Consensus 9 f~NFt~vLI~vlLi~llVrs 28 (31)
T 1jdm_A 9 FLNFTIVLITVILMWLLVRS 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 46777788888999988764
No 13
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A
Probab=35.42 E-value=37 Score=20.60 Aligned_cols=18 Identities=22% Similarity=0.290 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 045369 20 PAAFFTILALMCVVYKTV 37 (117)
Q Consensus 20 p~~~~tila~~~~vY~~v 37 (117)
..+|.+|+++++++|.++
T Consensus 32 fvnfclilicllli~iiv 49 (52)
T 1fjk_A 32 FINFCLILIFLLLICIIV 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467888888888888776
No 14
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=27.53 E-value=42 Score=17.79 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHhhCCCh
Q 045369 1 MVAFFAAVMDTVTTYTGLSP 20 (117)
Q Consensus 1 ~~~~~~~~~~~i~~~tglsp 20 (117)
|-+=|+.++|-|..-++-+|
T Consensus 6 mr~Q~~~lveKvq~a~~~~~ 25 (26)
T 1oeg_A 6 MQRQWAGLVEKVQAAVGTXX 25 (26)
T ss_dssp TTTHHHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHHHHcccC
Confidence 34569999999999888665
No 15
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=26.04 E-value=52 Score=21.38 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=22.4
Q ss_pred CCHHHHhhccCCCCCCCeEEEECCeEEE
Q 045369 84 VTEHELRAYDGSDPNKPLLMAIKGQIYD 111 (117)
Q Consensus 84 fT~eeL~~ydG~d~~~pi~lAi~G~VYD 111 (117)
.|..+|.+.-|.+ .+.+.+|+||++-+
T Consensus 37 ~Tv~dLL~~L~~~-~~~vaVavNg~iV~ 63 (87)
T 1tyg_B 37 GTIQDLLASYQLE-NKIVIVERNKEIIG 63 (87)
T ss_dssp CBHHHHHHHTTCT-TSCCEEEETTEEEC
T ss_pred CcHHHHHHHhCCC-CCCEEEEECCEECC
Confidence 6889998888877 55788999999954
No 16
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=25.69 E-value=68 Score=19.01 Aligned_cols=27 Identities=30% Similarity=0.187 Sum_probs=21.8
Q ss_pred CCHHHHhhccCCCCCCCeEEEECCeEEE
Q 045369 84 VTEHELRAYDGSDPNKPLLMAIKGQIYD 111 (117)
Q Consensus 84 fT~eeL~~ydG~d~~~pi~lAi~G~VYD 111 (117)
.|..+|.+.-|.+ .+.+-+|+||++-+
T Consensus 16 ~tv~~ll~~l~~~-~~~v~vavN~~~v~ 42 (66)
T 1f0z_A 16 QTVHELLEQLDQR-QAGAALAINQQIVP 42 (66)
T ss_dssp CCHHHHHHHHTCC-CSSEEEEETTEEEC
T ss_pred CcHHHHHHHcCCC-CCCEEEEECCEECC
Confidence 6888888888876 56789999999853
No 17
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=23.93 E-value=90 Score=17.07 Aligned_cols=10 Identities=30% Similarity=0.458 Sum_probs=5.9
Q ss_pred CCChHHHHHH
Q 045369 17 GLSPAAFFTI 26 (117)
Q Consensus 17 glsp~~~~ti 26 (117)
+||+.++..+
T Consensus 3 ~L~~gaIaGI 12 (33)
T 2l34_A 3 TVSPGVLAGI 12 (33)
T ss_dssp CCCTHHHHHH
T ss_pred ccCcceEEeE
Confidence 5666665554
No 18
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=22.85 E-value=60 Score=20.15 Aligned_cols=27 Identities=7% Similarity=0.015 Sum_probs=22.6
Q ss_pred CCCHHHHhhccCCCCCCCeEEEECCeEE
Q 045369 83 EVTEHELRAYDGSDPNKPLLMAIKGQIY 110 (117)
Q Consensus 83 ~fT~eeL~~ydG~d~~~pi~lAi~G~VY 110 (117)
..|..+|.+.-|-+ .+.+-+++||.|.
T Consensus 14 ~~Tl~~LL~~l~~~-~~~vAV~vNg~iV 40 (73)
T 2kl0_A 14 SASVAALMTELDCT-GGHFAVALNYDVV 40 (73)
T ss_dssp CSBHHHHHHHTTCC-SSSCEEEESSSEE
T ss_pred CCcHHHHHHHcCCC-CCcEEEEECCEEC
Confidence 47889999888887 5678899999984
No 19
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=22.70 E-value=80 Score=19.06 Aligned_cols=27 Identities=11% Similarity=-0.011 Sum_probs=21.8
Q ss_pred CCHHHHhhccCCCCCCCeEEEECCeEEE
Q 045369 84 VTEHELRAYDGSDPNKPLLMAIKGQIYD 111 (117)
Q Consensus 84 fT~eeL~~ydG~d~~~pi~lAi~G~VYD 111 (117)
.|..+|.+.-|.+ ...+.+|+||.+-+
T Consensus 24 ~tv~~Ll~~l~~~-~~~v~vavN~~~v~ 50 (70)
T 1ryj_A 24 RRIKDVLGELEIP-IETVVVKKNGQIVI 50 (70)
T ss_dssp CBHHHHHHHTTCC-TTTEEEEETTEECC
T ss_pred CcHHHHHHHhCCC-CCCEEEEECCEECC
Confidence 6888988888876 45788999999853
No 20
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=20.20 E-value=44 Score=23.55 Aligned_cols=21 Identities=19% Similarity=0.428 Sum_probs=17.7
Q ss_pred CCCHHHHhhccCCCCCCCeEE
Q 045369 83 EVTEHELRAYDGSDPNKPLLM 103 (117)
Q Consensus 83 ~fT~eeL~~ydG~d~~~pi~l 103 (117)
+.|.++++.|...+.++||+|
T Consensus 7 ~p~~~~~~~~~~~~~~~pv~M 27 (143)
T 3hhl_A 7 DPTKEVFAQFRANDREGPIHM 27 (143)
T ss_dssp SCCHHHHHHHHHCCCSSCEEE
T ss_pred CCCHHHHHHHHhCCCCCCEEE
Confidence 568899999998888899976
Done!