BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045370
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68EI0|WDR18_DANRE WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1
Length = 431
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F+DD +SG D + +W+++ ++ QLD E R + L +SL
Sbjct: 129 FTDDSSHFVSGGKDNLAFIWNLSSVV-----------QLDSSRTP-EPRHI--LSRHSLP 174
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLF 122
GL+ G ++SLD T KVW++ SG ++ + ++ + ++ F P E LF
Sbjct: 175 ITDIHCGLM---GPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLF 231
Query: 123 AGSIDGRIF-VSPLKFLLLEDH-FIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDK 178
G DG IF VS L D F + + V KGH +T L+ S + L+S S D+
Sbjct: 232 CGGSDGNIFQVSLCSTSLSRDKTFQSDSEGNQVFKGHRNLVTCLSVSMDGTVLLSGSNDE 291
Query: 179 TVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207
TV +WDV + I NH +G VTN +I
Sbjct: 292 TVRMWDVQSKQCIWTINH-RGPVTNAAII 319
>sp|Q9BV38|WDR18_HUMAN WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2
Length = 432
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 105/242 (43%), Gaps = 36/242 (14%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F+ D ISG D ++ VWS+ +L Q D I H
Sbjct: 129 FTGDSSHFISGGKDCLVLVWSLCSVL-----------QADPSRIPAPR-------HVWSH 170
Query: 63 HKSSVTGLLTISGGTTFFVS-SSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
H +T L GG V+ SSLD T K+W++ SG L+ + ++ ++ A+ E +
Sbjct: 171 HALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHM 230
Query: 122 FAGSIDGRIFVSPLKFLLL---EDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASE 176
F G +G IF L F E F +D V KGH +T L+ S S L+S S
Sbjct: 231 FCGGSEGSIFQVDL-FTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSH 289
Query: 177 DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRMPSLEKYPQ 236
D+TV LWDV + IR KG VTN + LL+ VS L D PSL P
Sbjct: 290 DETVRLWDVQSKQCIRTVA-LKGPVTNAAI-----LLAPVS----MLSSDFRPSL-PLPH 338
Query: 237 LN 238
N
Sbjct: 339 FN 340
>sp|Q4VBE8|WDR18_MOUSE WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1
Length = 431
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F+ DG +S D + WS+ +L+ S L R H +
Sbjct: 129 FTGDGSHFVSAGKDCLALAWSLCSVLQADP-----SRILAPR-------------HVWSQ 170
Query: 63 HKSSVTGLLTISGGTTFFVS-SSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
H +T L GG V+ +SLD T K+W + SG L+ + ++ +T++ E +
Sbjct: 171 HTLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHI 230
Query: 122 FAGSIDGRIF-VSPLKFLLLEDH-FIVGEDQHSVLKGHNGSITALAFS--ASHLISASED 177
F G DG IF V + L +H F ++ V KGH +T L+ S S L+S S D
Sbjct: 231 FCGGSDGSIFQVDLCSWPGLREHSFQPEQNTGKVFKGHRNQVTCLSVSTDGSVLLSGSHD 290
Query: 178 KTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207
++V LWDV + +R KG VTN +I
Sbjct: 291 ESVRLWDVKSKQCLRTVT-LKGPVTNAAII 319
>sp|Q499N3|WDR18_RAT WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2
SV=1
Length = 431
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F+ DG +S D ++ WS+ +L+ S L R H +
Sbjct: 129 FTGDGSHFVSAGKDCLVLAWSLCSVLQADP-----SRILAPR-------------HVWSQ 170
Query: 63 HKSSVTGLLTISGGTTFFVS-SSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
H +T L GG V+ +SLD T K+W + SG L+ + ++ +T++ E +
Sbjct: 171 HTLPITDLHCGFGGPMARVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYI 230
Query: 122 FAGSIDGRIFVSPL--KFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASED 177
F G DG IF L + E F ++ V KGH +T L+ S S L+S S D
Sbjct: 231 FCGGSDGSIFQVDLCSRPGPREQSFQPEQNTGKVFKGHRNQVTCLSVSTDGSILLSGSHD 290
Query: 178 KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLS 214
++V LWDV + +R K V + + S+L+
Sbjct: 291 ESVRLWDVKSKQCVRTVPLKGPVTNAAITLAPPSMLN 327
>sp|Q3SZD4|WDR18_BOVIN WD repeat-containing protein 18 OS=Bos taurus GN=WDR18 PE=2 SV=1
Length = 432
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F+ D ISG D ++ WS+ +L + + + H
Sbjct: 129 FTGDSSHFISGGKDCLVLAWSLCSVL------------------QADPSRTPAPRHVWSR 170
Query: 63 HKSSVTGLLTISGGTTFFVS-SSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
H +T L GG V+ +SLD T K+W++ SG L+ + ++ + A+ E +
Sbjct: 171 HTLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYM 230
Query: 122 FAGSIDGRIFVSPLKFLL--LEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASED 177
F G DG IF L E F ++ V +GH +T L+ S S L+S S D
Sbjct: 231 FCGGSDGSIFQVDLCTWPGQREKSFQPEQEHGKVFRGHRNQVTCLSVSTDGSVLLSGSHD 290
Query: 178 KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLS 214
+TV LWDV + +R K V +++ S+LS
Sbjct: 291 ETVRLWDVQSQQCLRTVTLKGPVTNACIMLAPVSMLS 327
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 33/203 (16%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL----------------DQR 44
+ FS DG L++ SDD I +WS+ R K L H++ + D R
Sbjct: 108 VCFSADGQSLLTASDDQSIKLWSVHR-QKIICTLREHNNWVRCARFSPDGQLMVSVSDDR 166
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ-TQ 103
+++ S R L+H E + + +T ++S D T +VWD+ + L+Q Q
Sbjct: 167 TVKLWDASSRQLIHTFCE-PGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSIT 162
V+ AV A++FHP L S D S LK L LLE + L GH GS +
Sbjct: 226 VHSAAVNALSFHPSGNHLLTASSD-----STLKILDLLEGRLLY------TLHGHQGSAS 274
Query: 163 ALAFSAS--HLISASEDKTVCLW 183
++FS S SA D+ V +W
Sbjct: 275 CVSFSRSGDQFASAGSDQQVMVW 297
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 44/176 (25%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-----PQAVTAIAFHPG 117
H+ ++T L G S S+DA+ VW++ Q++ Y AVT + F P
Sbjct: 17 HRDAITSLDFSPSGKQI-ASGSVDASVMVWNMKP----QSRAYRFTGHKDAVTCVQFSPS 71
Query: 118 EQLLFAGSIDG--RIFVSPLKF--LLLEDH---------------FIVGEDQHSV----- 153
LL + S D R++V +K +L H + D S+
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 154 --------LKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKG 199
L+ HN + FS ++S S+D+TV LWD + R I F G
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGG 187
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
KGH +IT+L FS S + S S D +V +W++ + RF K VT + +
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 212 LLSEVS 217
LL+ S
Sbjct: 74 LLASSS 79
>sp|Q10272|IPI3_SCHPO Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=crb3 PE=1 SV=1
Length = 446
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 45/223 (20%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
FS+DG +L + S+DG + W ++ L+ Q S E S++++ H+S
Sbjct: 126 FSNDGMVLFTASNDGDVFAWLISTLVDQNSTF------------ETSNSSVKAISHFSGH 173
Query: 63 HKSSVT---GLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQ 119
+S V+ G I G + ++S D T ++WD+ +G L+ T P + + P E+
Sbjct: 174 KRSIVSMEIGPGPIVSGRLY--TASEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPSER 231
Query: 120 LLFAGSIDGRIFV------SPLKFLLLEDHFIVGEDQHSVLKGHNG-------------- 159
+++ G+ G I++ S + E + D ++ G
Sbjct: 232 VVYVGNEKGIIWIPLYTGSSTFSNNVKEKKRVTSVDNTTIPNAIGGMGRVVDYNDSRESS 291
Query: 160 ------SITAL--AFSASHLISASEDKTVCLWDVTRRVSIRRF 194
IT L +F AS LIS +D V +WD R +RR
Sbjct: 292 IISCQSPITTLTVSFDASLLISGDKDGNVLVWDSVSRQVLRRL 334
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 28/115 (24%)
Query: 91 VWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGED 149
+W L SG LI + + Q +T + F +LF S DG +F + L+ D
Sbjct: 102 IWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDVFAWLISTLV---------D 152
Query: 150 QHSVLKGHNGSITALAFSASH------------------LISASEDKTVCLWDVT 186
Q+S + N S+ A++ + H L +ASED T+ +WDV+
Sbjct: 153 QNSTFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRIWDVS 207
>sp|Q6FLI3|CAF4_CANGA CCR4-associated factor 4 homolog OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAF4 PE=3 SV=1
Length = 579
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 49/202 (24%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
F DD LL S D + VW + ++ + + +D L L
Sbjct: 331 FIDDTRLLASAGKDASVKVWDVDNIVDKDG---NANDNL--------------CLATFDG 373
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-------QVYPQAVTAIAFH 115
HK SVT L T VS S D T + WDLGSG IQ+ ++ PQ+V+ +
Sbjct: 374 HKDSVTALATTGNA---IVSGSNDKTLRHWDLGSGKCIQSIDLTIALKMVPQSVSKLDIT 430
Query: 116 PG------------EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA 163
P + L G+ DG +++ L+ +VG L+GH G IT+
Sbjct: 431 PSFNTPLIGGADCIDNALVTGTKDGIVYLWDLRI-----GRVVGS-----LEGHRGPITS 480
Query: 164 LAFSASHLISASEDKTVCLWDV 185
L + S LI+ S DK+ +WD+
Sbjct: 481 LKYMGSELITGSMDKSTRIWDL 502
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 33/216 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG I+ SDD I W++ R L + T+ + D RLI +++
Sbjct: 110 FSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLI-ASCSDDKTV 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTF---------FVSSSLDATCKVWDLGSGILIQ-TQVYP 106
+ + ++ + + G + + S+ +D+T KVWD+ + L+Q QV+
Sbjct: 169 RIWDITNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQVHN 228
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF 166
V +++FHP L S DG + + LLE I L GH G + ++AF
Sbjct: 229 AGVNSLSFHPSGNYLLTASNDGTVKI----LDLLEGRLIY------TLHGHQGPVLSVAF 278
Query: 167 SAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGV 200
S S S + D V +W + + ++N K+ V
Sbjct: 279 SKSGDQFASGATDAQVLVW----KTNFDKYNIKEIV 310
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 44/176 (25%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYP-----QAVTAIAFHPG 117
HK +VT + S SSS DA +W+ Q++ Y +AVT + F P
Sbjct: 17 HKDAVT-YVDFSPDGKQLASSSADACVMIWNFKP----QSRAYKYPGHKEAVTCVQFSPS 71
Query: 118 EQLLFAGSIDG--RIFVSPLKF--LLLEDH---------------FIVGEDQHSV----- 153
L+ + S D R++ +K +L+ H FI D S+
Sbjct: 72 GHLVASSSKDRTVRLWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNL 131
Query: 154 --------LKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKG 199
L H + FS + S S+DKTV +WD+T R+ I F KG
Sbjct: 132 HRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKG 187
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 38/201 (18%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG L +G++D +I VW +++ R++R+ H
Sbjct: 350 VCFSPDGKYLATGAEDKLIRVW------------------------DIQSRTIRNTFH-- 383
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQL 120
H+ + L G T S S D T ++WD+ +G VT +A P +Q
Sbjct: 384 -GHEQDIYSLDFSRDGRTI-ASGSGDRTVRLWDIETGQNTSVLSIEDGVTTVAISPDKQF 441
Query: 121 LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDK 178
+ AGS+D + V ++ L E + G D GH S+ ++AFS +L+S S DK
Sbjct: 442 VAAGSLDKSVRVWDMRGYLAER--LEGPD------GHKDSVYSVAFSPDGRNLVSGSLDK 493
Query: 179 TVCLWDVTRRVSIRRFNHKKG 199
T+ +W+++ I KG
Sbjct: 494 TIKMWELSAPRGIPSSAPPKG 514
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 53/224 (23%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL-------DQRLI-------EM 48
FS DG + SGS D + +W + Q + ++ D + D++ + +
Sbjct: 394 FSRDGRTIASGSGDRTVRLWDIE--TGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSV 451
Query: 49 ELRSLRSLLHYSLE----HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV 104
+ +R L LE HK SV + G VS SLD T K+W+L + I +
Sbjct: 452 RVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGRNL-VSGSLDKTIKMWELSAPRGIPSSA 510
Query: 105 YPQA-------------VTAIAFHPGEQLLFAGSID-GRIFVSPLKFLLLEDHFIVGEDQ 150
P+ V ++A P Q + +GS D G F P G Q
Sbjct: 511 PPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPR----------TGHTQ 560
Query: 151 HSVLKGHNGSITALAFSA-------SHLISASEDKTVCLWDVTR 187
+L+GH S+ ++A S + + S D +W +R
Sbjct: 561 -LMLQGHKNSVISVAPSPVTGPNGVGYFATGSGDMRARIWSYSR 603
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 51 RSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG----------ILI 100
R L L ++L+H+S V + G +V++ + + +++D+ +G I +
Sbjct: 284 RVLDVELVHTLQHESVVCCVRFSMDGK--YVATGCNRSAQIYDVETGEKLCILQDENIDL 341
Query: 101 QTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160
+Y + ++ F P + L G+ D I V ++ + + F GH
Sbjct: 342 TGDLY---IRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTF----------HGHEQD 388
Query: 161 ITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVT 202
I +L FS + S S D+TV LWD+ + + + GV T
Sbjct: 389 IYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDGVTT 432
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLI---------E 47
F DG L++ SDD + VWS R L + + + D RLI +
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 48 MELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ-TQVYP 106
+ ++ R +H EH VT + GT ++ +D T KVWD + L+Q Q++
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDARTHRLLQHYQLHS 229
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITALA 165
AV A++FHP L S D S LK L L+E + L GH G T +A
Sbjct: 230 AAVNALSFHPSGNYLITASSD-----STLKILDLMEGRLLY------TLHGHQGPATTVA 278
Query: 166 FS--ASHLISASEDKTVCLW 183
FS + S D+ V +W
Sbjct: 279 FSRTGEYFASGGSDEQVMVW 298
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 27/229 (11%)
Query: 3 FSDDGFLLISGSDDGMICVW--------SMTRLLKQTSELMHHSDQLDQRLIEMELRSL- 53
FS G LL SGS D + +W ++ R T +H + + +++
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 54 -----RSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQ 107
R +SL + S VS+S D T K+WD S I + +
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 108 AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF- 166
VT + FHP + A +D + V + L H+ + H+ ++ AL+F
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQL----------HSAAVNALSFH 238
Query: 167 -SASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLS 214
S ++LI+AS D T+ + D+ + + +G T + R +
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 69/179 (38%), Gaps = 44/179 (24%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-----PQAVTAIAFHPG 117
H+ +VT + S T S S+D+T +W + Q++ Y AVT + F P
Sbjct: 18 HRDAVT-CVDFSLNTKHLASGSMDSTLMIWHMKP----QSRAYRFTGHKDAVTCVNFSPS 72
Query: 118 EQLLFAGSIDG--RIFVSPLK-----------------FLLLEDHFIVGEDQHSV----- 153
LL +GS D RI+V +K F + D +V
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 154 --------LKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVT 202
L H + FS ++SAS+DKTV LWD T R I + G VT
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVT 191
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 154 LKGHNGSITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVT 202
KGH ++T + FS HL S S D T+ +W + + RF K VT
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVT 65
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 43/195 (22%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG L++G++D I +W ++ T ++ + +Q + YS
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLS-----TQKVRYVFSGHEQDI-------------YS 407
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQL 120
L+ S F VS S D T ++WD+ +G I VTAIA P +Q
Sbjct: 408 LD----------FSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQF 457
Query: 121 LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDK 178
+ GS+D I V + L+E L+GH S+ ++AFS +S L+S S DK
Sbjct: 458 IAVGSLDQIIRVWSVSGTLVER-----------LEGHKESVYSIAFSPDSSILLSGSLDK 506
Query: 179 TVCLWD--VTRRVSI 191
T+ +W+ TR V +
Sbjct: 507 TIKVWELQATRSVGL 521
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 55 SLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT--QVYPQA---- 108
+L+H +LEH S V + + G ++++ + V+D+ +G + T + P
Sbjct: 305 NLVH-TLEHPSVVCCVKFSNNGK--YLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDL 361
Query: 109 -VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS 167
V IAF P + L G+ D +I K L + V GH I +L FS
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQI-----KLWDLSTQKV-----RYVFSGHEQDIYSLDFS 411
Query: 168 --ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVV 201
++S S D+T LWDV I + + GV
Sbjct: 412 HNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVT 447
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 86/201 (42%), Gaps = 33/201 (16%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL----------------DQRLI 46
FS DG L++ SDD I VW++ R K L H + + D + I
Sbjct: 110 FSGDGQSLVTASDDKTIKVWTVHR-QKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTI 168
Query: 47 EMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ-TQVY 105
++ ++ R +H EH V + T +++ D T KVWD+ LIQ QV+
Sbjct: 169 KLWDKTSRECIHSFCEHGGFVN-FVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVH 227
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITAL 164
V +++FHP L S D S LK L LLE + L GH G +T++
Sbjct: 228 SGVVNSLSFHPSGNYLITASND-----STLKVLDLLEGRLLY------TLHGHQGPVTSV 276
Query: 165 AFS--ASHLISASEDKTVCLW 183
FS S D+ V +W
Sbjct: 277 KFSREGEFFASGGSDEQVMVW 297
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 109 VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA 168
VT + F+P + L +GS+D + + +K + F+ GH +I ++ FS
Sbjct: 21 VTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFV----------GHKDAILSVDFSP 70
Query: 169 S-HLI-SASEDKTVCLW 183
S HLI SAS DKTV LW
Sbjct: 71 SGHLIASASRDKTVRLW 87
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 63/226 (27%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLL 121
H+ +VT + + T S S+D+ +W++ + V + A+ ++ F P L+
Sbjct: 17 HRDTVT-TVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLI 75
Query: 122 FAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--------- 170
+ S D R++V +K GE +V K H G++ +++FS
Sbjct: 76 ASASRDKTVRLWVPSVK----------GES--TVFKAHTGTVRSVSFSGDGQSLVTASDD 123
Query: 171 -----------------------------------LISASEDKTVCLWDVTRRVSIRRFN 195
++SAS+DKT+ LWD T R I F
Sbjct: 124 KTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFC 183
Query: 196 HKKGVVTNLVVIRQSS--LLSEVSNCQRKLKKDRMPSLEKYPQLNS 239
G V N V S + + ++ K+ RM L ++ Q++S
Sbjct: 184 EHGGFV-NFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHS 228
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 71 LTISGGTTFFVSSSLDATCKVWDLG-SGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGR 129
++ SG V++S D T KVW + L + V F P +L+ + S D
Sbjct: 108 VSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDD-- 165
Query: 130 IFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKTVCLWDVTR 187
K + L D E HS + H G + + F S + + +A+ D TV +WD+
Sbjct: 166 ------KTIKLWDK-TSRECIHSFCE-HGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRM 217
Query: 188 RVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218
I+ + GVV +L + L SN
Sbjct: 218 NKLIQHYQVHSGVVNSLSFHPSGNYLITASN 248
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 60 SLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGE 118
SL +S G + + V+ SL + ++WDL + +++T + + +++++ FHP
Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 119 QLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE 176
+ L +GS+D I K + V KGH ++ LAFS L SAS+
Sbjct: 118 EYLASGSVDSNI-----KLWDVRRKGCVFR-----YKGHTQAVRCLAFSPDGKWLASASD 167
Query: 177 DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRMPSLEKYPQ 236
D TV LWD+ I F V N+V + L + R +K + LEK+
Sbjct: 168 DSTVKLWDLIAGKMITEFTSHTSAV-NVVQFHPNEYLLASGSADRTVK---LWDLEKFNM 223
Query: 237 LNSLSMEMVILLQSCFFNKDDQC 259
+ S E + ++S FN D C
Sbjct: 224 IGSSEGETGV-VRSVLFNPDGSC 245
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 7 GFLLISGSDDGMICVWSMTRLLKQTSELMHHS-------DQLDQRLIEMELR-SLR---- 54
G LL +G +D + +W++++ S H S + ++R++ L SLR
Sbjct: 33 GRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 55 ---SLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLG-SGILIQTQVYPQAVT 110
+L + HK+S++ L G + S S+D+ K+WD+ G + + + + QAV
Sbjct: 93 EAAKILRTLMGHKASISSLDFHPMGE-YLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVR 151
Query: 111 AIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH 170
+AF P + L + S D S +K L ++ E H ++ + F +
Sbjct: 152 CLAFSPDGKWLASASDD-----STVKLWDLIAGKMITE-----FTSHTSAVNVVQFHPNE 201
Query: 171 --LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLL 213
L S S D+TV LWD+ + I + GVV +++ S L
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCL 246
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 71 LTISGGTTFFVSSSLDATCKVWDLGSGILI-QTQVYPQAVTAIAFHPGEQLLFAGSIDGR 129
L S + S+S D+T K+WDL +G +I + + AV + FHP E LL +GS D
Sbjct: 153 LAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRT 212
Query: 130 IFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDK-TVCLWDVT 186
+ K LE ++G + G G + ++ F+ S L S SE+ V W+
Sbjct: 213 V-----KLWDLEKFNMIGSSE-----GETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPD 262
Query: 187 R 187
R
Sbjct: 263 R 263
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 81/200 (40%), Gaps = 31/200 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG L + S+D I VWSM R L + T + D RLI + +++
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTI 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTF---------FVSSSLDATCKVWDLGSGILIQ-TQVYP 106
+ +K V G F S+ D T KVWD+ L+Q QV+
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITALA 165
V I+FHP + L S DG LK L LLE I L+GH G + ++
Sbjct: 229 GGVNCISFHPSDNYLVTASSDGT-----LKILDLLEGRLIY------TLQGHTGPVFTVS 277
Query: 166 FSASH--LISASEDKTVCLW 183
FS S D V LW
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 15/151 (9%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVW-DLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
HK VT + S S+S D T ++W G + + + V ++ F Q L
Sbjct: 59 HKDVVTSV-QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKT 179
S D I V + + F+ L H + FS ++S SEDKT
Sbjct: 118 ATASEDKSIKV----WSMYRQRFLYS------LYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 180 VCLWDVTRRVSIRRFNHKKGVVTNLVVIRQS 210
+ +WD T + + F+ G N V S
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFA-NFVDFNPS 197
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
KGH +IT+L S + L +AS D + LW+ R+ K VVT++ +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 212 LLSEVS 217
LL+ S
Sbjct: 74 LLASAS 79
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-Y 59
+ FS DG + SGSDD I +W T T L H + + + + + S +
Sbjct: 1015 VAFSPDGQRVASGSDDKTIKIWD-TASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH 1073
Query: 60 SLEHKSSVTGLLTIS----GGTTFFV----------SSSLDATCKVWDLGSGILIQT-QV 104
+++ +V+G T + G + + V S S+D T K+WD SG QT +
Sbjct: 1074 TIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEG 1133
Query: 105 YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITAL 164
+ V ++AF P Q + +GSIDG I + L+GH G + ++
Sbjct: 1134 HGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCT----------QTLEGHGGWVQSV 1183
Query: 165 AFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLV 205
AFS + S S DKT+ +WD + G V ++
Sbjct: 1184 AFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVA 1226
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 31/224 (13%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL----------------DQR 44
+ FS DG + SGSDD I +W T T L H + D +
Sbjct: 847 VAFSADGQRVASGSDDKTIKIWD-TASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDK 905
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
I++ + +LE + S S S D T K+WD SG QT +
Sbjct: 906 TIKI-WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLE 964
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA 163
+ +V ++AF P Q + +GS D K + + D L+GH GS+ +
Sbjct: 965 GHGSSVLSVAFSPDGQRVASGSGD--------KTIKIWD--TASGTCTQTLEGHGGSVWS 1014
Query: 164 LAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLV 205
+AFS + S S+DKT+ +WD + G V ++V
Sbjct: 1015 VAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVV 1058
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 39/224 (17%)
Query: 1 MVFSDDGFLLISGSDDGMICVW-SMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHY 59
+ FS DG + SGSDD I +W + + QT E H S L R
Sbjct: 931 VAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLE-GHGSSVLSVAFSPDGQRVASGSGDK 989
Query: 60 SLEHKSSVTGLLTIS----GGTTFFV----------SSSLDATCKVWDLGSGILIQT-QV 104
+++ + +G T + GG+ + V S S D T K+WD SG QT +
Sbjct: 990 TIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEG 1049
Query: 105 YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS-----VLKGHNG 159
+ V ++ F P Q + +GS +DH I D S L+GH
Sbjct: 1050 HGGWVQSVVFSPDGQRVASGS---------------DDHTIKIWDAVSGTCTQTLEGHGD 1094
Query: 160 SITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVV 201
S+ ++AFS + S S D T+ +WD + G V
Sbjct: 1095 SVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWV 1138
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
++E E + L H SSV + + G S S D T K+WD SG QT +
Sbjct: 825 VVEAEWNACTQTLE---GHGSSVLSVAFSADGQRV-ASGSDDKTIKIWDTASGTGTQTLE 880
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA 163
+ +V ++AF P + + +GS D K + + D Q L+GH G + +
Sbjct: 881 GHGGSVWSVAFSPDRERVASGSDD--------KTIKIWDAASGTCTQ--TLEGHGGRVQS 930
Query: 164 LAFS--ASHLISASEDKTVCLWDV 185
+AFS + S S+D T+ +WD
Sbjct: 931 VAFSPDGQRVASGSDDHTIKIWDA 954
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG I+ SDD I W++ R L + T+ + D RLI +++
Sbjct: 110 FSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLI-ASCSDDKTV 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTF---------FVSSSLDATCKVWDLGSGILIQ-TQVYP 106
+ L ++ + + G + + S+ D+T KVWD+ L+Q QV+
Sbjct: 169 RIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHN 228
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITALA 165
V++++FHP L S DG LK L LLE I L GH G + ++
Sbjct: 229 AGVSSLSFHPSGNYLLTASSDGT-----LKILDLLEGRLIY------TLHGHQGPVLSVT 277
Query: 166 FSAS--HLISASEDKTVCLW 183
FS S S + D V +W
Sbjct: 278 FSKSGDQFASGATDAQVLVW 297
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYP-----QAVTAIAFHPG 117
HK +VT + S + SSS DA +W+ Q++ Y +AVT + F P
Sbjct: 17 HKDAVT-CVDFSPDSKQLASSSADACVMIWNFKP----QSRAYKYPGHKEAVTCVQFSPS 71
Query: 118 EQLLFAGSIDG--RIFVSPLK--FLLLEDH---------------FIVGEDQHSV----- 153
L+ + S D R++ +K +L+ H FI D S+
Sbjct: 72 GHLVASSSKDRTVRLWAPNIKGESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNL 131
Query: 154 --------LKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKG 199
L H + FS + S S+DKTV +WD+T R+ I F KG
Sbjct: 132 HRQRFLFSLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKG 187
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG L + S+D I VWSM R L + T + D RLI + +++
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTI 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTF---------FVSSSLDATCKVWDLGSGILIQ-TQVYP 106
+ +K V G F S+ D T KVWD+ L+Q QV+
Sbjct: 169 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITALA 165
V I+FHP L S DG LK L LLE I L+GH G + ++
Sbjct: 229 GGVNCISFHPSGNYLITASSDGT-----LKILDLLEGRLIY------TLQGHTGPVFTVS 277
Query: 166 FSASH--LISASEDKTVCLW 183
FS S D V LW
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 11/149 (7%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVW-DLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
HK VT + S S+S D T ++W G + + + V ++ F Q L
Sbjct: 59 HKDVVTSV-QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 117
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVC 181
S D I V + + F+ +H+ H + ++S SEDKT+
Sbjct: 118 ATASEDKSIKV----WSMYRQRFLYSLYRHT----HWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 182 LWDVTRRVSIRRFNHKKGVVTNLVVIRQS 210
+WD T + + F+ G N V S
Sbjct: 170 IWDTTNKQCVNNFSDSVGFA-NFVDFNPS 197
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
KGH +IT+L S + L +AS D + LW+ R+ K VVT++ +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 212 LLSEVS 217
LL+ S
Sbjct: 74 LLASAS 79
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEM--ELRSLR 54
FS DG L++ SDD + VW + R L + T+ + D RLI + R++R
Sbjct: 110 FSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVR 169
Query: 55 SLLHYSLEHKSSVTGLLTISGGTTFFV----------SSSLDATCKVWDLGSGILIQ-TQ 103
L + H+ + T GG+ FV SS D T K+WD+ + LIQ +
Sbjct: 170 --LWDTSSHQ--CINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYK 225
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSIT 162
V+ V +FHP L +GS D S +K L LLE I L GH G +
Sbjct: 226 VHNAGVNCFSFHPSGNYLISGSSD-----STIKILDLLEGRLIY------TLHGHKGPVL 274
Query: 163 ALAFS--ASHLISASEDKTVCLW 183
+ FS S D V +W
Sbjct: 275 TVTFSRDGDLFASGGADSQVLMW 297
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 80 FVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138
+ S D + +W+L V + +T + F P L+ + S D + +
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRD--------QTV 84
Query: 139 LLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDKTVCLWDVTRR 188
L I GE +V K H S+ ++ FS L++AS+DK+V +W V R+
Sbjct: 85 RLWTPSIKGES--TVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK 134
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL----------------DQRLI 46
FS DG L++ SDD I VW++ R K L H + + D + I
Sbjct: 110 FSGDGQSLVTASDDKTIKVWTVHR-QKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTI 168
Query: 47 EMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ-TQVY 105
++ ++ R + EH V + T +++ D T KVWD+ LIQ QV+
Sbjct: 169 KLWDKTSRECIQSFCEHGGFVN-FVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVH 227
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITAL 164
V +++FHP L S D S LK L LLE + L GH G +T +
Sbjct: 228 SGVVNSLSFHPSGNYLITASND-----STLKVLDLLEGRLLY------TLHGHQGPVTCV 276
Query: 165 AFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQS 210
FS S D+ V +W + N G +L+ RQ+
Sbjct: 277 KFSREGDFFASGGSDEQVMVW---------KTNFDAGSYPDLLKYRQN 315
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 109 VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA 168
VTA+ F+ + L +GS+D + V +K + F+ GH +I ++ FS
Sbjct: 21 VTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFV----------GHKDAILSVDFSP 70
Query: 169 S-HLI-SASEDKTVCLWDVTRRVSIRRFNHKKGVV 201
S HLI SAS DKTV LW + + F G V
Sbjct: 71 SGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTV 105
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQ----------------- 43
+ FS DG ++ SGS DG +W++ + + L H+D +
Sbjct: 549 IAFSPDGSMVASGSRDGTARLWNVATGTEH-AVLKGHTDYVYAVAFSPDGSMVASGSRDG 607
Query: 44 --RLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ 101
RL ++ R +L E+ S L S + V S D+T +WD+ SG +
Sbjct: 608 TIRLWDVATGKERDVLQAPAENVVS----LAFSPDGSMLVHGS-DSTVHLWDVASGEALH 662
Query: 102 T-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160
T + + V A+AF P LL +GS D + + L D + +++H+ L+GH
Sbjct: 663 TFEGHTDWVRAVAFSPDGALLASGSDD--------RTIRLWD--VAAQEEHTTLEGHTEP 712
Query: 161 ITALAF--SASHLISASEDKTVCLWDV 185
+ ++AF + L SASED T+ +W +
Sbjct: 713 VHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQ------TSELMHHSDQLDQRLIEMELRSLR 54
+ FS DG LL SGSDD + +W + ++ T ++ + D ++ R
Sbjct: 507 VAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGT 566
Query: 55 SLL--------HYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVY 105
+ L H L+ + + S + S S D T ++WD+ +G Q
Sbjct: 567 ARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAP 626
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALA 165
+ V ++AF P +L GS D + L D GE H+ +GH + A+A
Sbjct: 627 AENVVSLAFSPDGSMLVHGS-DSTVH--------LWD-VASGEALHT-FEGHTDWVRAVA 675
Query: 166 FSASH--LISASEDKTVCLWDV 185
FS L S S+D+T+ LWDV
Sbjct: 676 FSPDGALLASGSDDRTIRLWDV 697
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 59 YSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG---ILIQTQVYPQAVTAIAFH 115
++LE + + S S S DAT ++WD+ + + + + V IAF
Sbjct: 495 HTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTH--YVLDIAFS 552
Query: 116 PGEQLLFAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHL 171
P ++ +GS DG R++ + +H+VLKGH + A+AFS S +
Sbjct: 553 PDGSMVASGSRDGTARLW------------NVATGTEHAVLKGHTDYVYAVAFSPDGSMV 600
Query: 172 ISASEDKTVCLWDV 185
S S D T+ LWDV
Sbjct: 601 ASGSRDGTIRLWDV 614
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 41/201 (20%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG +L SGSDD + +WS+ S L+
Sbjct: 1332 VTFSPDGTMLASGSDDQTVRLWSI---------------------------SSGECLYTF 1364
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQ 119
L H + V G + S S S D T ++W + SG + T Q + V +I F P
Sbjct: 1365 LGHTNWV-GSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGT 1423
Query: 120 LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLI--SASED 177
LL +GS D + + + GE ++ L GH S+ ++AFS+ LI S S+D
Sbjct: 1424 LLASGSDDQTVRLWNIS---------SGECLYT-LHGHINSVRSVAFSSDGLILASGSDD 1473
Query: 178 KTVCLWDVTRRVSIRRFNHKK 198
+T+ LWDV I+ +K
Sbjct: 1474 ETIKLWDVKTGECIKTLKSEK 1494
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 37/240 (15%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTR------LLKQTS----------ELMHHSDQLDQR 44
+VFS DG +L SGSDD + +W ++ L TS M S DQ
Sbjct: 1038 VVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQI 1097
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
+ ++ S L Y+L+ +S L S + S D ++WD+ S + T Q
Sbjct: 1098 VRLWDISSGNCL--YTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQ 1155
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIF---VSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160
+ V A+AF P L +GS D + +S K L +L+GH
Sbjct: 1156 GHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLY-------------ILQGHTSW 1202
Query: 161 ITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218
+ ++ F+ S L S S D+TV LW++ + F V ++V S+L+ S+
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 29/238 (12%)
Query: 1 MVFSDDGFLLISGSDDGMICVW---------------SMTRLLKQTSELMHHSDQLDQRL 45
+VFS DG +L SG DD ++ +W S R L + + ++ ++
Sbjct: 1080 VVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQI 1139
Query: 46 IEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG-ILIQTQV 104
+ + S + L Y+L+ ++ + S S S D T ++WD+ S L Q
Sbjct: 1140 VRLWDISSKKCL-YTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQG 1198
Query: 105 YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITAL 164
+ V ++ F+P L +GS D + L E I +GH + ++
Sbjct: 1199 HTSWVNSVVFNPDGSTLASGSSDQTV-------RLWE---INSSKCLCTFQGHTSWVNSV 1248
Query: 165 AFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
F+ S L S S DKTV LWD++ + F V ++ S+L+ S Q
Sbjct: 1249 VFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQ 1306
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 37/242 (15%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTR-----LLKQTSELMHH-----------SDQLDQR 44
+ FS DG L SGS D + +W ++ +L+ + ++ S DQ
Sbjct: 1164 VAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQT 1223
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
+ E+ S + L + H S V ++ G+ S S D T ++WD+ S + T Q
Sbjct: 1224 VRLWEINSSKCLCTFQ-GHTSWVNSVVFNPDGS-MLASGSSDKTVRLWDISSSKCLHTFQ 1281
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIF---VSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160
+ V ++AF+P +L +GS D + +S K L +GH
Sbjct: 1282 GHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCL-------------HTFQGHTSW 1328
Query: 161 ITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218
++++ FS + L S S+D+TV LW ++ + F V +++ ++L+ S
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSG 1388
Query: 219 CQ 220
Q
Sbjct: 1389 DQ 1390
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRS----- 55
+VFS +G L +GS D ++ +W ++ K L H++ ++ + +L S
Sbjct: 1122 LVFSPNGVTLANGSSDQIVRLWDISSK-KCLYTLQGHTNWVNAVAFSPDGATLASGSGDQ 1180
Query: 56 -----------LLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
L+ H S V ++ G+T S S D T ++W++ S + T Q
Sbjct: 1181 TVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTL-ASGSSDQTVRLWEINSSKCLCTFQ 1239
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA 163
+ V ++ F+P +L +GS D K + L D I +GH + +
Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSD--------KTVRLWD--ISSSKCLHTFQGHTNWVNS 1289
Query: 164 LAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
+AF+ S L S S D+TV LW+++ + F V+++ ++L+ S+ Q
Sbjct: 1290 VAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQ 1348
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMT----------------RLLKQTSELMHHSDQLDQR 44
+ F+ DG +L +GS D + +W ++ ++ + M S DQ
Sbjct: 996 VAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQT 1055
Query: 45 LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-Q 103
+ ++ S L Y+L+ +S + S S D ++WD+ SG + T Q
Sbjct: 1056 VRLWDISSGNCL--YTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQ 1113
Query: 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA 163
Y V + F P L GS D + + L D I + L+GH + A
Sbjct: 1114 GYTSWVRFLVFSPNGVTLANGSSD--------QIVRLWD--ISSKKCLYTLQGHTNWVNA 1163
Query: 164 LAFS--ASHLISASEDKTVCLWDVT 186
+AFS + L S S D+TV LWD++
Sbjct: 1164 VAFSPDGATLASGSGDQTVRLWDIS 1188
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 80 FVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138
S S D T ++WD+ SG ++T + + V ++ F P +L +GS D + + +
Sbjct: 921 LASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDIS-- 978
Query: 139 LLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDKTVCLWDVTRRVSIRRFNH 196
GE + + +GH G + ++AF+ S L + S D+TV LWD++ F
Sbjct: 979 -------SGECLY-IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQG 1030
Query: 197 KKGVVTNLVVIRQSSLLSEVSNCQ 220
V ++V ++L+ S+ Q
Sbjct: 1031 HTSCVRSVVFSSDGAMLASGSDDQ 1054
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 41/187 (21%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE 62
FS DG +L SGSDD + +W ++ S Q L++ +
Sbjct: 914 FSQDGKMLASGSDDQTVRLWDIS------------SGQC--------LKTFKG------- 946
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG-ILIQTQVYPQAVTAIAFHPGEQLL 121
H S V ++ S + S S D T ++WD+ SG L Q + V ++AF+ +L
Sbjct: 947 HTSRVRSVV-FSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSML 1005
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDKT 179
GS D + + L D I + +GH + ++ FS + L S S+D+T
Sbjct: 1006 ATGSGD--------QTVRLWD--ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQT 1055
Query: 180 VCLWDVT 186
V LWD++
Sbjct: 1056 VRLWDIS 1062
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 117 GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISA 174
G L A S DG++F + ++ + KGHN + ++ FS L S
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 175 SEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
S+D+TV LWD++ ++ F V ++V S +L+ S+ Q
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQ 970
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 79 FFVSSSLDATCKVWDLGSGI-LIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137
F + + W+ +G L+ + + V ++ F ++L +GS D +
Sbjct: 878 LFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDD--------QT 929
Query: 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLI--SASEDKTVCLWDVTRRVSIRRFN 195
+ L D I KGH + ++ FS + L+ S S D+TV LWD++ + F
Sbjct: 930 VRLWD--ISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQ 987
Query: 196 HKKGVVTNLVVIRQSSLLSEVSNCQ 220
G V ++ S+L+ S Q
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQ 1012
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 49/194 (25%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG L +G++D + VW + H+ ++ EL YS
Sbjct: 333 VCFSPDGNYLATGAEDKTVKVWDI------------HTKKIQHTFYGHELDI------YS 374
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG----ILIQTQVYPQ-AVTAIAFH 115
L++ S F VS S D K+WD+ G L +V P+ VT++A
Sbjct: 375 LDYSSD----------GRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMS 424
Query: 116 PGEQLLFAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHL 171
P +L+ AGS+D R++ + + L +GH S+ ++AFS L
Sbjct: 425 PDGRLVAAGSLDNIVRLWDAQTGYFL------------ERYEGHLDSVYSVAFSPDGKSL 472
Query: 172 ISASEDKTVCLWDV 185
S S DK++ LWD+
Sbjct: 473 ASGSLDKSLKLWDL 486
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 50/194 (25%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ S DG L+ +GS D ++ +W QT + E L S+ S+ +S
Sbjct: 421 VAMSPDGRLVAAGSLDNIVRLWDA-----QTGYFLER--------YEGHLDSVYSVA-FS 466
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-----YPQAVTAIAFH 115
+ KS S SLD + K+WDL + V ++AF
Sbjct: 467 PDGKS--------------LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 116 PGEQLLFAGSIDGRI-FVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA---SHL 171
P L +GS D + F P H +L+GH S+ ++A S SH
Sbjct: 513 PDGSWLISGSKDRSVQFWDPRNGTT-----------HMMLQGHKNSVISVALSPKNNSHG 561
Query: 172 I--SASEDKTVCLW 183
+ + S D LW
Sbjct: 562 VFATGSGDFRSRLW 575
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 38/191 (19%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG L +G++D +I +W L+ + I M L+ + YS
Sbjct: 412 VCFSPDGKFLATGAEDKLIRIW-----------------DLETKKIVMTLKGHEQDI-YS 453
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGE-Q 119
L++ S L++ SG D T ++WDL +G T VT +A PGE +
Sbjct: 454 LDYFPSGNKLVSGSG----------DRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGEGK 503
Query: 120 LLFAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISAS 175
+ AGS+D R++ S FL+ + ++ + GH S+ ++ F+ ++S S
Sbjct: 504 FIAAGSLDRTVRVWDSDTGFLVERL-----DSENELGTGHRDSVYSVVFTRDGKGVVSGS 558
Query: 176 EDKTVCLWDVT 186
D++V LW++
Sbjct: 559 LDRSVKLWNLN 569
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 109 VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF-- 166
+ ++ F P + L G+ D I + LE IV LKGH I +L +
Sbjct: 409 IRSVCFSPDGKFLATGAEDKLI-----RIWDLETKKIV-----MTLKGHEQDIYSLDYFP 458
Query: 167 SASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVT 202
S + L+S S D+TV +WD+T + + GV T
Sbjct: 459 SGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTT 494
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 25 TRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE-HKSSVTGLLTISGGTTFFVSS 83
TRL + E+ H R E + R Y+L H+S +T +L + V+S
Sbjct: 68 TRLSEAEKEVHHGGGPKKTRSPEDWIP--RPPERYTLTGHRSPITKVL-FHPVYSVMVTS 124
Query: 84 SLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142
S DAT KVWD +G +T + + AV +AF + L + S D I + +
Sbjct: 125 SEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQ------ 178
Query: 143 HFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKTVCLWDVTRRVSIRRFNHKKGV 200
G + L GH+ ++++++F S HL+SAS DKT+ +W++ ++ F
Sbjct: 179 ----GFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGEW 234
Query: 201 VTNLVVIRQSSLLSEVSNCQ 220
V + SL++ SN Q
Sbjct: 235 VRRVRPNADGSLIASCSNDQ 254
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 30/187 (16%)
Query: 6 DGFLLISGSDDGMICVWSM-TRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK 64
DG L+ S S+D I VW + +R K D D + +L +
Sbjct: 243 DGSLIASCSNDQTIRVWVVASRECK--------CDLRDHDHVIEDLNWAPESATPVINEA 294
Query: 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFA 123
+ V G F VS+S D + K+WD+ +G+ + T V + V A+ FHPG + + +
Sbjct: 295 AGVEGGKKAMSPGPFLVSASRDKSIKIWDVSAGVCLVTLVGHDNWVRAVMFHPGGKFIVS 354
Query: 124 GSIDGRIFVSPL------KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASED 177
S D + + K L+ +HF+ D H SA + + S D
Sbjct: 355 CSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHK--------------SAPFVATGSVD 400
Query: 178 KTVCLWD 184
T+ +W+
Sbjct: 401 LTLKVWE 407
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H +V+ + + G VS+S D T K+W++ +G ++T Q + + V + + L+
Sbjct: 189 HDHNVSSISFLPSGD-HLVSASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADGSLI 247
Query: 122 FAGSIDG--RIFVSPLKFLL--LEDHFIVGEDQH----------SVLKGHNGSITALAFS 167
+ S D R++V + L DH V ED + + G G A++
Sbjct: 248 ASCSNDQTIRVWVVASRECKCDLRDHDHVIEDLNWAPESATPVINEAAGVEGGKKAMS-P 306
Query: 168 ASHLISASEDKTVCLWDVTRRVSI 191
L+SAS DK++ +WDV+ V +
Sbjct: 307 GPFLVSASRDKSIKIWDVSAGVCL 330
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ +S DG +++G DDG + VW+ +L +
Sbjct: 379 LAYSPDGQYIVTGGDDGKVKVWN----------------------------TLSGFCFVT 410
Query: 61 L-EHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAV--TAIAFHPG 117
EH S VTG+ T + V+SS+D T + +DL +T P+ + +A
Sbjct: 411 FTEHSSGVTGV-TFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDAS 469
Query: 118 EQLLFAGSIDG-RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA--SHLISA 174
+++ AG+ D IFV ++ L D VL GH G I+ L F+ S L SA
Sbjct: 470 GEIVSAGAQDSFEIFVWSMQTGRLLD----------VLSGHEGPISGLCFNPMKSVLASA 519
Query: 175 SEDKTVCLWDV 185
S DKTV LWD+
Sbjct: 520 SWDKTVRLWDM 530
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 40/219 (18%)
Query: 4 SDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEH 63
S+DG L +G+ D + +W++ IE ++ +H H
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLN--------------------IE---DNVYKCIHVFTGH 409
Query: 64 KSSVT----GLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQ 119
+SVT G L ++G TF SSS D T K ++LGS L ++ +AV I H +
Sbjct: 410 TASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQ-LNKSDFSNRAVWTIKAHDRDV 468
Query: 120 LLFAGSIDGRIFVSP-----LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLI 172
S DGRI S +K +VG VL+GH + A +F+ + L
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGEVVG-----VLRGHRRGVWACSFNPFSRQLA 523
Query: 173 SASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
S S D+T+ +W+V + ++ G + L+ I Q +
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGT 562
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 71 LTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAF--HPGEQLLFAGSID 127
+TI T + + KVWD+ + + + + ++A+ F H +L +G+ D
Sbjct: 109 MTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADD 168
Query: 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKTVCLWDV 185
R+ + L +V +GH+ I L F + S L+S S DKTV +W++
Sbjct: 169 SRVRLWDLN----------SSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Query: 186 TRRVSIR 192
+R ++R
Sbjct: 219 KKRSAVR 225
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 23/135 (17%)
Query: 9 LLISGSDDGMICVWSMTRLL------------------KQTSELMHHSDQLDQRLIEMEL 50
LL +G +G++ VW + K + + S D R+ +L
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDL 176
Query: 51 RSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVT 110
S RS+ + E SSV LT +F +S S D T +VW++ ++T +V
Sbjct: 177 NSSRSMAVF--EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVE 234
Query: 111 AIAF---HPGEQLLF 122
AI + P E++L+
Sbjct: 235 AIGWVNGQPEEKILY 249
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 86/201 (42%), Gaps = 33/201 (16%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG LL++ S+D I VWSM R L + T + D RLI + +++
Sbjct: 110 FSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTI 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSLDATC----------KVWDLGSGILIQ-TQVY 105
+ +K V + S G FV + + TC K+WD+ L+Q QV+
Sbjct: 169 KIWDTTNKQCVNN-FSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVH 227
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL-LLEDHFIVGEDQHSVLKGHNGSITAL 164
V ++FHP L S DG + K L L+E I L+GH G + +
Sbjct: 228 SCGVNCLSFHPLGNSLVTASSDGTV-----KMLDLIEGRLIY------TLQGHTGPVFTV 276
Query: 165 AFSASH--LISASEDKTVCLW 183
+FS L S D V +W
Sbjct: 277 SFSKDGELLTSGGADAQVLIW 297
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLG-SGILIQTQVYPQAVTAIAFHPGEQLL 121
HK VT L S S+S D T ++W L G + + + V ++ F QLL
Sbjct: 59 HKDVVTSL-QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLL 117
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKT 179
S D I V + + F+ L H + FS ++S SEDKT
Sbjct: 118 VTASEDKSIKV----WSMFRQRFLYS------LYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 180 VCLWDVTRRVSIRRFNHKKG 199
+ +WD T + + F+ G
Sbjct: 168 IKIWDTTNKQCVNNFSDSVG 187
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
KGH +IT+ FS + + +AS D + LW + R+ K VVT+L Q +
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 212 LLSEVS 217
LL+ S
Sbjct: 74 LLASAS 79
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 4 SDDGFLLISGSDDGMICVWSMT----RLLKQTSELM---HHSDQLDQRLIEMELRSLRSL 56
+DD L+ G D + VWS+T R +KQ S+L SD + +R+++ + S +
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKI 538
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGS-GILIQTQVYPQAVTAIAFH 115
L+ H V G + S + +SSS D T ++W L + L+ + + V F
Sbjct: 539 LY---GHSGPVYGA-SFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 116 PGEQLLFAGSID--GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHL 171
P +G D R++ + DH+ + GH + F +++++
Sbjct: 595 PYGYYFVSGGHDRVARLWAT--------DHY----QPLRIFAGHLADVNCTRFHPNSNYV 642
Query: 172 ISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223
+ S D+TV LWDV +R F KG + +L L+ + R L
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEM----------ELRS 52
FS D L+S S+DG + +WS+ H+ D + +
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 610
Query: 53 LRSLLHYS-----LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYP 106
L + HY H + V + + + S D T ++WD+ +G ++ +
Sbjct: 611 LWATDHYQPLRIFAGHLADVN-CTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF 166
+ ++ F P + L G+ DGR+ + + L+ VGE LKGH ++ +L F
Sbjct: 670 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM-----VGE-----LKGHTDTVCSLRF 719
Query: 167 S--ASHLISASEDKTVCLWDVTR 187
S L S S D TV LWD +
Sbjct: 720 SRDGEILASGSMDNTVRLWDAIK 742
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 54 RSLLHYSLE-HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTA 111
R YSL H+S +T +L + VS+S DAT K+WD +G +T + + AV
Sbjct: 95 RPPARYSLSGHRSPITRVL-FHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQD 153
Query: 112 IAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SAS 169
++F +LL + S D + + F E+ + GH+ +++++ F +
Sbjct: 154 VSFDQQGKLLASCSAD--MTIKLWDFQTFENI--------KTMHGHDHNVSSVHFMPNGD 203
Query: 170 HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
LISAS DKT+ +W++ ++ F + V + V + SLL+ SN Q
Sbjct: 204 FLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQ 254
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS 65
DG LL S S+D + VW + + +EL H ++ I S H S
Sbjct: 243 DGSLLASCSNDQTVRVWVVANK-ECKAELREHEHVVE--CIAWAPESCNG-------HVS 292
Query: 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAG 124
V G F +S S D T K+WD+ +G+ I T V + V + +HPG + + +
Sbjct: 293 EVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISA 352
Query: 125 SIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKTVCL 182
S D I V K + L+ H T++ F SA ++I+ S D+TV +
Sbjct: 353 SDDKTIRVWDYKNKRCQ----------KTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKV 402
Query: 183 WD 184
W+
Sbjct: 403 WE 404
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H +V+ + + G F +S+S D T K+W+L +G ++T + + V + + LL
Sbjct: 189 HDHNVSSVHFMPNGD-FLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLL 247
Query: 122 FAGSIDG--RIFVSPLKFLLLE--DHFIVGEDQHSVLKGHNGSITAL------AFSASHL 171
+ S D R++V K E +H V E + NG ++ + S L
Sbjct: 248 ASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFL 307
Query: 172 ISASEDKTVCLWDVTRRVSI 191
+S S DKT+ +WD++ V I
Sbjct: 308 LSGSRDKTIKMWDISTGVCI 327
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 81 VSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLL 139
VSSS DA+ K+WD SG +T + + +V +AF +LL + S D + V F
Sbjct: 123 VSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGKLLASSSAD--MTVKIWDFQT 180
Query: 140 LEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKTVCLWDVTRRVSIRRFNHK 197
E L+GH+ +++++ F S L+S+S DKT+ +W+V + F
Sbjct: 181 FECRM--------TLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVATGYCVYNFEGH 232
Query: 198 KGVVTNLVVIRQSSLLSEVSNCQ 220
+ V + V SL++ SN Q
Sbjct: 233 REWVRRVAVASDGSLMASCSNDQ 255
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ + DG L+ S S+D + +WS++ + EL H + ++E + S Y
Sbjct: 239 VAVASDGSLMASCSNDQTVRIWSLSS-KECKEELRGH-----EHVVECIKWAPESCNRYI 292
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQ 119
E +S T + F S S D K+WD+ + + + + V + V +AFH G +
Sbjct: 293 NE--ASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVGHDNWVRGLAFHAGGK 350
Query: 120 LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASED 177
L + S D I + L+ L+ HN +T + F S+ +I+ S D
Sbjct: 351 YLTSASDDKTIKIWELRHKRCS----------KSLEAHNHFVTTIDFHRSSPFVITGSVD 400
Query: 178 KTVCLWD 184
T+ +W+
Sbjct: 401 LTIKVWE 407
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H SV L S G SSS D T K+WD + T + + V+++ F P L
Sbjct: 148 HTDSVQDLAFDSSGK-LLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFL 206
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSI--TALAFSASHLISASEDKT 179
+ S D I K + + V +GH + A+A S + S S D+T
Sbjct: 207 LSSSRDKTI-----KMWEVATGYCVYN-----FEGHREWVRRVAVASDGSLMASCSNDQT 256
Query: 180 VCLWDVTRR 188
V +W ++ +
Sbjct: 257 VRIWSLSSK 265
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
L GH+ + LAF A +L SAS+DKT+ +W++ + + VT + R S
Sbjct: 333 LVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFHRSSP 392
Query: 212 LL 213
+
Sbjct: 393 FV 394
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 2 VFSDDGFLLISGSDDGMICVWS------MTRLLKQTSELMHHSDQLDQRLIEMEL--RSL 53
FS DG L++ SDDG + VW + RL + D RLI S+
Sbjct: 33 AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSI 92
Query: 54 R-------SLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-Y 105
R LH H+ SV ++ S + S D VW++ SG + V +
Sbjct: 93 RLWDVARSKCLHVLKGHQRSVE-TVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGH 151
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALA 165
++ + F P L GS D + + L+ +V + L+GH G+I+ L
Sbjct: 152 CDSIQSSDFSPTSDSLATGSWDSTVHIWDLR----ASTPVV---SYHNLEGHTGNISCLC 204
Query: 166 FSASHLI-SASEDKTVCLWDVT 186
+SAS L+ S S DKT+C+W T
Sbjct: 205 YSASGLLASGSWDKTICVWKPT 226
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 39/208 (18%)
Query: 2 VFSDDGFLLISGSDDGMICVWSMTR-----LLK------QTSELMHHSDQL-----DQRL 45
FS DG L+ S S D I +W + R +LK +T S QL D+R
Sbjct: 75 CFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRA 134
Query: 46 IEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT--- 102
I E++S R + H + H S+ S + + S D+T +WDL + + +
Sbjct: 135 IVWEVQSGRRV-HLLVGHCDSIQSS-DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 103 -QVYPQAVTAIAFHPGEQLLFAGSIDGRIFV--SPLKFLLLEDHFIVGEDQHSVLKGHNG 159
+ + ++ + + LL +GS D I V L L+ LKGH
Sbjct: 193 LEGHTGNISCLCYS-ASGLLASGSWDKTICVWKPTTNNLPLQ------------LKGHTI 239
Query: 160 SITALAFSASH--LISASEDKTVCLWDV 185
+ +LAFS L SA +TV +WD
Sbjct: 240 WVNSLAFSPDELKLASAGYSRTVKVWDC 267
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 4 SDDGFLLISGSDDGMICVWSMT----RLLKQTSELM---HHSDQLDQRLIEMELRSLRSL 56
+DD L+ G D + VWS+T R +KQ S+L SD + +R+++ + S +
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKI 539
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGS-GILIQTQVYPQAVTAIAFH 115
L+ H V G + S + +SSS D T ++W L + L+ + + V F
Sbjct: 540 LY---GHSGPVYGA-SFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 116 PGEQLLFAGSID--GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHL 171
P +G D R++ + DH+ + GH + + +++++
Sbjct: 596 PYGYYFVSGGHDRVARLWAT--------DHY----QPLRIFAGHLADVNCTRYHPNSNYV 643
Query: 172 ISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223
+ S D+TV LWDV +R F KG + +L L+ + R L
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEM----------ELRS 52
FS D L+S S+DG + +WS+ H+ D + +
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 611
Query: 53 LRSLLHYS-----LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYP 106
L + HY H + V + + + S D T ++WD+ +G ++ +
Sbjct: 612 LWATDHYQPLRIFAGHLADVN-CTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670
Query: 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF 166
+ ++ F P + L G+ DGR+ + + L+ VGE LKGH ++ +L F
Sbjct: 671 GPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM-----VGE-----LKGHTDTVCSLRF 720
Query: 167 S--ASHLISASEDKTVCLWDVTR 187
S L S S D TV LWD +
Sbjct: 721 SRDGEILASGSMDNTVRLWDAVK 743
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 3 FSDDGFLLISGSDDGMICVWSMTR------LLKQTSELMHHSDQLDQRLIEMELRSLRSL 56
FS DG L++ S+D I VWSM R L + T + D RLI + +++
Sbjct: 110 FSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTI 168
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSLDATC----------KVWDLGSGILIQ-TQVY 105
+ K V + S G FV S + TC ++WD+ L+Q QV+
Sbjct: 169 KIWDTTSKQCVNN-FSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVH 227
Query: 106 PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALA 165
V ++FHP L S DG + + L+E I L+GH G + ++
Sbjct: 228 SCGVNCLSFHPSGNSLVTASSDGTVKI----LDLVEGRLIY------TLQGHTGPVFTVS 277
Query: 166 FSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNL 204
FS S D V +W R S + +++ NL
Sbjct: 278 FSKDGELFTSGGADAQVLVW----RTSFNQVHYRDPSKRNL 314
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 14/140 (10%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLG-SGILIQTQVYPQAVTAIAFHPGEQLL 121
HK VT L S S+S D T ++W L G + + + V ++ F Q L
Sbjct: 59 HKDVVTSL-QFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKT 179
S D I V + + F+ L H + FS ++S SEDKT
Sbjct: 118 VTASEDKSIKV----WSMYRQRFLYS------LYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 180 VCLWDVTRRVSIRRFNHKKG 199
+ +WD T + + F+ G
Sbjct: 168 IKIWDTTSKQCVNNFSDSVG 187
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 154 LKGHNGSITALAFSAS--HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211
KGH +IT+ FS + + +AS D + LW + R+ K VVT+L Q +
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 212 LLSEVS 217
LL+ S
Sbjct: 74 LLASAS 79
>sp|O14170|POP2_SCHPO WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop2 PE=1 SV=1
Length = 703
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSE--LMHHSDQLDQRLIEMELRSLRSLLHY 59
+ D ++SGS D + VW +L K T L +++ +D+ +H
Sbjct: 452 IVEPDQPYIVSGSRDHTLRVW---KLPKNTDPPYLPDNTNSIDR------WEKNPYFVHT 502
Query: 60 SLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG-ILIQTQVYPQAVTAIAFHPGE 118
+ H SV TISG VS S D++ ++W + +G L + + + ++ + P
Sbjct: 503 LIGHTDSVR---TISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPER 559
Query: 119 QLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDK 178
+ +GS+D I V L G ++ VL+GH+ +T L + LIS S D
Sbjct: 560 NICISGSMDKSIRVWDLS---------TGTCKY-VLEGHDAFVTLLNVFQNRLISGSADS 609
Query: 179 TVCLWDVTRRVSIRRFNHKKGVVTNLV 205
T+ +WD+ + G +++ V
Sbjct: 610 TIRIWDLNTGKPLMVLPSNSGYISSFV 636
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 7 GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSS 66
G +L+SGS D I +W ++ T E ++H LR SL YS+ ++
Sbjct: 517 GDILVSGSYDSSIRIWRVS-----TGECLYH------------LRG-HSLRIYSVLYEPE 558
Query: 67 VTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGS 125
+S S+D + +VWDL +G + + VT + + L +GS
Sbjct: 559 ----------RNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVF--QNRLISGS 606
Query: 126 IDGRIFV------SPLKFLLLEDHFIVG--EDQHSVLKGHNGSI 161
D I + PL L +I D+H ++ G++GS+
Sbjct: 607 ADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKIISGNDGSV 650
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 38/190 (20%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ FS DG L +G++D +I +W ++ R I M L+ + YS
Sbjct: 449 VCFSPDGKFLATGAEDRLIRIW-----------------DIENRKIVMILQGHEQDI-YS 490
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGE-Q 119
L++ S L++ SG D T ++WDL +G T VT +A PG+ +
Sbjct: 491 LDYFPSGDKLVSGSG----------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 540
Query: 120 LLFAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISAS 175
+ AGS+D R++ S FL+ + E++ GH S+ ++ F+ ++S S
Sbjct: 541 YIAAGSLDRAVRVWDSETGFLV---ERLDSENESGT--GHKDSVYSVVFTRDGQSVVSGS 595
Query: 176 EDKTVCLWDV 185
D++V LW++
Sbjct: 596 LDRSVKLWNL 605
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 109 VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF-- 166
+ ++ F P + L G+ D I + +E+ IV +L+GH I +L +
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLI-----RIWDIENRKIV-----MILQGHEQDIYSLDYFP 495
Query: 167 SASHLISASEDKTVCLWDV 185
S L+S S D+TV +WD+
Sbjct: 496 SGDKLVSGSGDRTVRIWDL 514
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQ 119
L H++ +T +L + VS+S DA+ KVWD +G +T + + +V IAF Q
Sbjct: 103 LGHRAPITRVL-FHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHTGQ 161
Query: 120 LLFAGSIDGRIFVSPLK-FLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASE 176
L + S D I + K + L + GH+ +++++ F S H++S S
Sbjct: 162 FLASCSADMTIKLWDFKSYECLR-----------TMHGHDHNVSSVCFLPSGDHVVSCSR 210
Query: 177 DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
DK++ +W+V +R F + V + V SLL+ SN Q
Sbjct: 211 DKSIKMWEVATGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQ 254
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 6 DGFLLISGSDDGMICVWSM-TRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK 64
DG LL S S+D + VW + T+ K EL H D + + + L +
Sbjct: 243 DGSLLASCSNDQTVRVWVVGTKECKL--ELREH----DHVVECVAWAPAHAQLCGAAGDS 296
Query: 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFA 123
+ G G F VS S D T KVWD+ +G+ + T V + V + FHPG + L +
Sbjct: 297 NRRPGAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVGHDNWVRGVKFHPGGKYLLS 356
Query: 124 GSIDGRIFVSPL------KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASED 177
S D + V L K L HF D H +A ++++ S D
Sbjct: 357 ASDDKTLRVWELAHQRCCKTLDAHSHFCTSLDFHR--------------TAPYVVTGSVD 402
Query: 178 KTVCLWD 184
+TV +W+
Sbjct: 403 QTVKVWE 409
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H +V+ + + G VS S D + K+W++ +G ++T + V + + LL
Sbjct: 189 HDHNVSSVCFLPSGD-HVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMVRVNSDGSLL 247
Query: 122 FAGSIDG--RIFVSPLKFLLLE----DHFI---VGEDQHSVLKGHNG------SITALAF 166
+ S D R++V K LE DH + H+ L G G
Sbjct: 248 ASCSNDQTVRVWVVGTKECKLELREHDHVVECVAWAPAHAQLCGAAGDSNRRPGAGGAQG 307
Query: 167 SASHLISASEDKTVCLWDVT 186
+ L+S S DKT+ +WDV+
Sbjct: 308 TGPFLVSGSRDKTIKVWDVS 327
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
Query: 78 TFFVSSSLDATCKVWDLGSG-ILIQTQVYPQAVTAIAFHPGEQLLFAGSIDG--RIFVSP 134
T VS S+D T ++WD+ SG L Q + V +AF + + S DG R++
Sbjct: 276 TLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLY--- 332
Query: 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDKTVCLWD 184
H + G QH+++ GH G I+ +AF+ + LI+AS DKT LWD
Sbjct: 333 --------HTLTGVCQHTLV-GHEGEISKVAFNPQGTRLITASSDKTCRLWD 375
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 80 FVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAF-HPGEQLLFAGSIDGRIFVSPLKF 137
F++ S D TCKVW+ +G + T + + V AIAF +P + GS D K
Sbjct: 109 FITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFD--------KT 160
Query: 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLI--SASEDKTVCLWDV 185
L D + G+ + LKGH I L+F+ I + S D T LWDV
Sbjct: 161 CKLWDAY-TGQ-LYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDV 208
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQA-VTAIAFH 115
L+Y+L+ + L+ + +T + S+D T K+WD+ +G T +A + ++ F+
Sbjct: 171 LYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFN 230
Query: 116 PGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSI--TALAFSASHLIS 173
G L+ GS D + ++ G+ H VL GH G + T ++ + ++S
Sbjct: 231 TGGDLIVTGSFDHDSRLWDVR---------TGQCVH-VLSGHRGEVSSTQFNYAGTLVVS 280
Query: 174 ASEDKTVCLWDV 185
S D T LWDV
Sbjct: 281 GSIDCTSRLWDV 292
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 81 VSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLL 139
V+ S D TCK+WD +G L T + + + ++F+P ++ GS+D + K
Sbjct: 153 VTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMD-----NTAKLWD 207
Query: 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHK 197
+E G+++ + L GH I +L F+ +++ S D LWDV + +
Sbjct: 208 VE----TGQER-ATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGH 262
Query: 198 KGVVTN 203
+G V++
Sbjct: 263 RGEVSS 268
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS 60
+ +S DG +++G DDG + VW+ +L +
Sbjct: 376 LAYSPDGQYIVTGGDDGKVKVWN----------------------------TLSGFCFVT 407
Query: 61 L-EHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAV--TAIAFHPG 117
EH S VTG+ T + V+SS+D T + +DL +T P+ + +A
Sbjct: 408 FTEHSSGVTGV-TFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDAS 466
Query: 118 EQLLFAGSIDG-RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA--SHLISA 174
+++ AG+ D IFV ++ L D VL GH G I+ L F+ S L SA
Sbjct: 467 GEIVSAGAQDSFEIFVWSMQTGRLLD----------VLSGHEGPISGLCFNPMKSILASA 516
Query: 175 SEDKTVCLWDV 185
S DKT LWD+
Sbjct: 517 SWDKTERLWDM 527
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 9 LLISGSDDGMICVWSMTRLLKQTSELMHHSD-----QLDQ-RLIEMELRSLRSLLHYSLE 62
+L SGS D I +W++ +Q + L HS Q DQ +LI + + +Y
Sbjct: 285 ILASGSYDATIRLWNLA-TFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTS 343
Query: 63 HKSSV-----TGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPG 117
S+ +L ++ +T VS S D T K+W G I + + V ++
Sbjct: 344 ECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRD 403
Query: 118 EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASED 177
L+ +GS D S +K LE + + H G + +LA + S L S S D
Sbjct: 404 RGLVLSGSDD-----STIKIWSLETNTCL-----HTFSAHIGPVQSLALADSRLFSCSLD 453
Query: 178 KTVCLWDVTRRVSIRR-FNHKKGV 200
T+ WD+ ++ + F H +GV
Sbjct: 454 GTIKQWDIEKKKCVHTLFGHIEGV 477
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 69 GLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSID 127
G++ + S S DAT ++W+L + + + + VT + F + L +GS+D
Sbjct: 275 GVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMD 332
Query: 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVT- 186
I + + + S+L GH S+ L F ++ L+S S D TV LW +
Sbjct: 333 KTIRIWNYRT----------SECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSG 382
Query: 187 -RRVSIRRFNHKKGVVTNLVVIRQSSLL 213
+R+++R G V ++ +IR L+
Sbjct: 383 GKRITLRGHT---GPVNSVRIIRDRGLV 407
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 40/197 (20%)
Query: 6 DGFLLISGSDDGMICVWSMT-----------------RLLKQTSELMHHSDQLDQRLIEM 48
D LL+SGS D + +W + R+++ ++ SD ++ +
Sbjct: 362 DSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL 421
Query: 49 ELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQ 107
E + LH H V L + S SLD T K WD+ + T + +
Sbjct: 422 ETNTC---LHTFSAHIGPVQSLAL---ADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIE 475
Query: 108 AVTAIAFHPGEQL-LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF 166
V IA + L L +G+ DG + V + E H+ LK H+ +T++A
Sbjct: 476 GVWEIA---ADHLRLISGAHDGVVKV-----------WEACECVHT-LKNHSEPVTSVAL 520
Query: 167 SASHLISASEDKTVCLW 183
++S SED + LW
Sbjct: 521 GDCEVVSGSEDGKIYLW 537
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 119 QLLFAGSIDGRIFVSPLKFLLLEDHF--------IVGEDQHSVLKGHNGSITALAFSASH 170
Q++ +G DG + + ++ +L + + Q ++L+GH+ +T L F
Sbjct: 266 QVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK 325
Query: 171 LISASEDKTVCLWD 184
LIS S DKT+ +W+
Sbjct: 326 LISGSMDKTIRIWN 339
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 80 FVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138
+S S+D T ++W+ + I + +V + F LL +GS D + +
Sbjct: 326 LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLW----- 378
Query: 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH 196
HF G + L+GH G + ++ ++S S+D T+ +W + + F+
Sbjct: 379 ----HFSGG--KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA 432
Query: 197 KKGVVTNLVV 206
G V +L +
Sbjct: 433 HIGPVQSLAL 442
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H+S +T +L FVS+S DA+ KVWD +G T + + +V +AF P + L
Sbjct: 121 HRSPITRVL-FHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFL 179
Query: 122 FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASHLISASEDKT 179
+ S D ++ + F + + L GH+ +++++AF S L+SAS DKT
Sbjct: 180 ASCSADMQVKL--WDFTIYQ--------CIKTLTGHDHNVSSVAFLPSGDFLVSASRDKT 229
Query: 180 VCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218
+ +W+V+ + F + ++ + +LL+ SN
Sbjct: 230 IKMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSN 268
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 4 SDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH--YSL 61
S +G LL S S+D I +WS ++ R ++ LR ++
Sbjct: 257 SPEGNLLASCSNDHTIRIWS-----------------VESRECQVVLRGHEHVVECIAWA 299
Query: 62 EHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQL 120
H ++ L + + VS S D T + WD+ GI + + + V + FHP +L
Sbjct: 300 SHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRL 359
Query: 121 LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLISASEDK 178
L + S D I V LK H L H+ +T+L + A + I+ S D+
Sbjct: 360 LLSASDDKTIRVWDLK----------NRRCHKTLNAHSHFVTSLDVNRLAPYAITGSVDQ 409
Query: 179 TVCLWD 184
T+ +WD
Sbjct: 410 TIHIWD 415
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 54/215 (25%)
Query: 9 LLISGSDDGMICVWSMTRLLKQTSELMH----HSDQLDQRLIEMELRSLRS--------L 56
+ +S S+D I VW +T E H H+D + + + L S L
Sbjct: 136 VFVSASEDASIKVWDY-----ETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKL 190
Query: 57 LHYSLE--------HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQ 107
+++ H +V+ + + G F VS+S D T K+W++ +G +T + + +
Sbjct: 191 WDFTIYQCIKTLTGHDHNVSSVAFLPSGD-FLVSASRDKTIKMWEVSTGYCTKTFIGHTE 249
Query: 108 AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS 167
+ ++ P LL + S D I + ++ + VL+GH + +A+
Sbjct: 250 WIRSVRPSPEGNLLASCSNDHTIRIWSVE----------SRECQVVLRGHEHVVECIAW- 298
Query: 168 ASH----------------LISASEDKTVCLWDVT 186
ASH L+S S D+T+ WDV
Sbjct: 299 ASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVN 333
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 153 VLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR 208
VL GH+ + L F L+SAS+DKT+ +WD+ R + N VT+L V R
Sbjct: 340 VLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHKTLNAHSHFVTSLDVNR 397
>sp|A7THX0|MDV1_VANPO Mitochondrial division protein 1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=MDV1 PE=3 SV=1
Length = 706
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 30/190 (15%)
Query: 9 LLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVT 68
+LI+G D M+ +W + L Q DQ IE + S +H H +T
Sbjct: 453 MLITGGKDAMLKIWDIN--------LATQLYQEDQSSIESDYNSC---IHTFDSHSGGIT 501
Query: 69 GLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT----QVYPQAVTAIA----FHPGEQL 120
L S + VS+S D T + WDL +G IQT V Q T I F+ +
Sbjct: 502 AL---SFDSVHLVSASQDKTIRQWDLVNGKCIQTIDLSSVVKQNQTDIVNIPDFYSSSEP 558
Query: 121 LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS-----VLKGHNGSITALAFSASHLISAS 175
GS+ + F + L D + D S GH ++T+L F + +LIS S
Sbjct: 559 FVTGSL--QCFDAALA-TGTRDGLVRLWDMRSGKVVRTFMGHTNAVTSLKFDSYNLISGS 615
Query: 176 EDKTVCLWDV 185
DK++ WD+
Sbjct: 616 LDKSIRTWDL 625
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 78 TFFVSSSLDATCKVWDLGSGILI-QTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLK 136
T + LD T VWDL + + + + + + +L G D + + +
Sbjct: 410 TLCTAGYLDHTVNVWDLTRKVKVAEMSGHLATIQCMQLGSHYNMLITGGKDAMLKIWDIN 469
Query: 137 F---LLLEDHFIVGEDQHS---VLKGHNGSITALAFSASHLISASEDKTVCLWDV 185
L ED + D +S H+G ITAL+F + HL+SAS+DKT+ WD+
Sbjct: 470 LATQLYQEDQSSIESDYNSCIHTFDSHSGGITALSFDSVHLVSASQDKTIRQWDL 524
>sp|Q6CB13|MDV1_YARLI Mitochondrial division protein 1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=MDV1 PE=3 SV=1
Length = 565
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 63 HKSSVTGL-LTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL 121
H SVT L I GT VS+ +D KVWDL G L+ T + + +L
Sbjct: 257 HSDSVTCLDFDIPFGT--MVSAGMDLGLKVWDLSRGDLV-TDLKGHNASVTCLQVDNNVL 313
Query: 122 FAGSIDGRIFVSPLKFLLLE-DHFIVGEDQHS--VLKGHNGSITALAFSASHLISASEDK 178
GS D I V L ++ D G+D ++ VL H G I+A+ FS L+S S DK
Sbjct: 314 ATGSADATIRVWNLDQVVSNPDAQDEGDDAYTIHVLDSHVGEISAIHFSDHTLVSGSADK 373
Query: 179 TVCLWDVT 186
T+ WD+
Sbjct: 374 TIRQWDLN 381
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 48/201 (23%)
Query: 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS 65
D +L +GS D I VW++ +++ D +++ + + S +H+S +H
Sbjct: 309 DNNVLATGSADATIRVWNLDQVVSNPDAQDEGDDAYTIHVLDSHVGEI-SAIHFS-DHT- 365
Query: 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-----------QVYPQAVTAIAF 114
VS S D T + WDL +G +QT +Y F
Sbjct: 366 --------------LVSGSADKTIRQWDLNTGRCVQTLDVIWANSAQNALYSNDRLRTGF 411
Query: 115 HPGEQLLFA----------GSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITAL 164
+ A G+ DG + + L+ G+ Q + L+GH ++T L
Sbjct: 412 DANAPFIGAVQCRDAALATGTADGIVRLWDLR---------SGQVQRT-LQGHTAAVTCL 461
Query: 165 AFSASHLISASEDKTVCLWDV 185
F HL + S D++V +WD+
Sbjct: 462 QFDDVHLATGSRDRSVRIWDL 482
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 154 LKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVS 190
LKGHN S+T L + L + S D T+ +W++ + VS
Sbjct: 296 LKGHNASVTCLQVDNNVLATGSADATIRVWNLDQVVS 332
>sp|Q6C953|IPI3_YARLI Pre-rRNA-processing protein IPI3 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=IPI3 PE=3 SV=1
Length = 426
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 84 SLDATCKVWDLGSGILIQTQVYPQA--VTAIAFHPGEQLLFAGSIDGRIF------VSPL 135
S D T ++WD+ S L+ T P A T +A E+ LF G G I VSP
Sbjct: 188 STDKTVRIWDVSSTALLTTITLPAAETPTTLAVDQLERTLFVGCASGNILSVSLYDVSPS 247
Query: 136 KFLL-LEDHFIVGEDQHSVLKGHNGSITALA--FSASHLISASEDKTVCLWDVTRRV--- 189
L+ + V E + L H ++T+LA F A+ L+SA + +C+WD+ R
Sbjct: 248 TGLVSVGGASGVVESGNVALSHHKSAVTSLALSFDATLLVSADDKGFICVWDLPSRQVSR 307
Query: 190 SIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRMPSLEK 233
SI++ + VT + I L +E N + +K +P L++
Sbjct: 308 SIKQPRAEMNPVTYVQTITTHGLPTEKYNPKTAVK---LPMLKR 348
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 48 MELRSLRSLLHYSLEHKS---SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV 104
++L S ++ H+ + + SV T SG F + + A V++ + Q V
Sbjct: 16 VDLHSGNNITHFKNDETAPNLSVFLTNTPSGNPLLFSAQTKGAMMHVYNWNRESVDQQIV 75
Query: 105 YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITAL 164
P+ ++ +A L GS GR+FV + L + + H ++T L
Sbjct: 76 LPEKLSCLAASTCGTWLAGGSASGRLFV----WELASGKLVFSREVHY------QAVTKL 125
Query: 165 AFSASHLISASEDKTVCLWDVTRRVS 190
AF+ L S S+D V W + S
Sbjct: 126 AFTDGLLFSTSKDARVLGWSLVTMAS 151
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 79 FFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137
+ S ++D ++D+ +G L+ T + + + ++ F P QLL S DG I + ++
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSA--SHLISASEDKTVCLWDVTRRVSIRRF 194
L L GH + ++AFS +H +S+S DK++ +WD + R + F
Sbjct: 222 ANLA----------GTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 57 LHYSLE-HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAF 114
L ++LE H+ V + IS SSSLDA ++WDL +G I++ P +AF
Sbjct: 56 LQWTLEGHQLGVVSV-NISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAF 114
Query: 115 HPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASHLI 172
P + + GS G++ + ++ G+ +HS L I ++A+S +L
Sbjct: 115 SPDSKYIATGSHLGKVNIFGVE---------SGKKEHS-LDTRGKFILSIAYSPDGKYLA 164
Query: 173 SASEDKTVCLWDVT 186
S + D + ++D+
Sbjct: 165 SGAIDGIINIFDIA 178
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 44/154 (28%)
Query: 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-- 58
+ +S DG L SG+ DG+I ++ + T +L+H +E +RSL
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIA-----TGKLLH--------TLEGHAMPIRSLTFSP 200
Query: 59 ----------------YSLEHKSSVTGLLTISGG----------TTFFVSSSLDATCKVW 92
Y ++H +++ G L+ G T FVSSS D + KVW
Sbjct: 201 DSQLLVTASDDGYIKIYDVQH-ANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW 259
Query: 93 DLGSGILIQTQV-YPQAVTAIAFHP-GEQLLFAG 124
D S + T + V ++ ++P G +++ AG
Sbjct: 260 DTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAG 293
>sp|Q8MY12|MHCKC_DICDI Myosin heavy chain kinase C OS=Dictyostelium discoideum GN=mhkC
PE=1 SV=1
Length = 780
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL---------DQRLIEMELRSLRSL 56
D L SGS+DG I VW L K + + H + DQ ++ SL +
Sbjct: 520 DSLRLYSGSNDGQIGVWDAVEL-KHVTNIKAHGKSIRAVIKRPGFDQNILTAGADSL--V 576
Query: 57 LHYSLEHKSSVTGLLTISGGTTFFVSSSL------DATCKVWDLGSGILIQT-QVYPQAV 109
+ + + ++ + + T F+ +L D T KVWD+ S ++T + +A+
Sbjct: 577 KEWDINTQQTIKEIKESNEVNTIFIQDNLLYTGCNDKTVKVWDMRSYECVKTLSGHTRAI 636
Query: 110 TAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSAS 169
++ LLF+GS D +I+V L + +F +GH G + L +
Sbjct: 637 KSVCAM--GNLLFSGSNDQQIYVWNLATGTILTNF----------QGHEGWVKTLYAHNN 684
Query: 170 HLISASEDKTVCLWDV 185
L S S D+T+ +WD+
Sbjct: 685 MLYSGSHDETIRIWDL 700
>sp|O94620|CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf17 PE=1 SV=1
Length = 340
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT--QVYPQAVTAIAFHPGEQL 120
H V L + G+ S S D T KVWD S I+T + YP AIA G Q
Sbjct: 134 HAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIA-QQGTQ- 191
Query: 121 LFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS--VLKGHNGSITALAFS--ASHLISASE 176
+F G IDG I + L+ + H VLKGH IT+LA S S L+S S
Sbjct: 192 VFIGGIDGAIKIWDLR------------NNHCSHVLKGHKDIITSLAISKDGSSLLSNSM 239
Query: 177 DKTVCLWDVTRRVSIRR 193
D TV ++DV S +R
Sbjct: 240 DNTVRIFDVKPFASAQR 256
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 150 QHSVLKGHNGSITALAFSASHLI--SASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207
+ VL G G+IT L +S + +S D + WD IR+ GVV L V+
Sbjct: 85 NYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVL 144
Query: 208 R-QSSLLSEVS-NCQRKL----KKDRMPSL-EKYP 235
+ S LL+ VS +C K+ KD + ++ EKYP
Sbjct: 145 KVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYP 179
>sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis
thaliana GN=At5g21040 PE=2 SV=1
Length = 539
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 13/188 (6%)
Query: 22 WSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE----HKSSVTGLLTISGGT 77
W + + S + +E E RS L YS++ H +V + ++
Sbjct: 116 WGLPVVFGAASSGLSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVFLLASAK 175
Query: 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137
F +S D+ ++WD+ G+ I P T A +LL AG DG F+ K
Sbjct: 176 LVF-TSGYDSIVRMWDMEEGLSIAAS-KPLGCTIRALAADTKLLVAGGTDG--FIHCWKS 231
Query: 138 L-----LLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIR 192
L L + E L GH G IT+LA + + S S D +V +WD + ++
Sbjct: 232 LDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVK 291
Query: 193 RFNHKKGV 200
H V
Sbjct: 292 TLRHSDWV 299
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 54 RSLLHYSLE-HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTA 111
R Y+L H+S VT ++ + V+SS DAT KVWD +G +T + + +V
Sbjct: 97 RPPERYALSGHRSPVTRVI-FHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQD 155
Query: 112 IAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SAS 169
I+F +LL + S D I + + G + + GH+ +++++A +
Sbjct: 156 ISFDQTGKLLASCSADMTIKLWDFQ----------GFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 170 HLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220
H++SAS DKT+ +W+V ++ F + V + + SL++ SN Q
Sbjct: 206 HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQ 256
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS 65
DG L+ S S+D + VW T + +EL H + ++E + + LE S
Sbjct: 245 DGSLIASCSNDQTVRVWVATS-KECKAELREH-----EHVVECIAWAPDTAHPTILEATS 298
Query: 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAG 124
S + SG F +S S D T K+WD+ +G+ + T V + V + HPG + + +
Sbjct: 299 SESKKNGKSG--PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSC 356
Query: 125 SIDGRIFV------SPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDK 178
+ D + + +K L +HF+ D H +A ++++ S D+
Sbjct: 357 ADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQ--------------TAPYVVTGSVDQ 402
Query: 179 TVCLWD 184
TV +W+
Sbjct: 403 TVKVWE 408
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 14/137 (10%)
Query: 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLL 121
H +V+ + + G VS+S D T K+W++ +G ++T + + V + + L+
Sbjct: 191 HDHNVSSVAIMPNGD-HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLI 249
Query: 122 FAGSIDG--RIFVSPLKFLLLE----DHFI-----VGEDQH-SVLKGHNGSITALAFSAS 169
+ S D R++V+ K E +H + + H ++L+ + S
Sbjct: 250 ASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGP 309
Query: 170 HLISASEDKTVCLWDVT 186
L+S S DKT+ +WD++
Sbjct: 310 FLLSGSRDKTIKMWDIS 326
>sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing protein 1A OS=Mus musculus GN=Btrc PE=1
SV=2
Length = 605
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 60 SLEHKSSVTG----LLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-PQAVTAIAF 114
+LE K +TG +L + ++ S D+T +VWD+ +G ++ T ++ +AV + F
Sbjct: 332 TLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRF 391
Query: 115 HPGEQLLFAGSIDGRIFV----SPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH 170
+ G ++ S D I V SP L VL GH ++ + F +
Sbjct: 392 NNG--MMVTCSKDRSIAVWDMASPTDITL-----------RRVLVGHRAAVNVVDFDDKY 438
Query: 171 LISASEDKTVCLWDVTRRVSIRRFN-HKKGVV 201
++SAS D+T+ +W+ + +R N HK+G+
Sbjct: 439 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 69 GLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSID 127
G+ + VS S D T ++WD+ G ++ + + + V I F + + +G+ D
Sbjct: 468 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 525
Query: 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWD 184
G+I V L L+ G L H+G + L F ++S+S D T+ +WD
Sbjct: 526 GKIKVWDL-MAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL---------------DQRLIEMEL 50
D ++I+GS D + VW + + + L+HH + + D+ + ++
Sbjct: 352 DERVIITGSSDSTVRVWDVN-AGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 410
Query: 51 RS-----LRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QV 104
S LR +L + H+++V + + VS+S D T KVW+ + ++T
Sbjct: 411 ASPTDITLRRVL---VGHRAAVN---VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 105 YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITAL 164
+ + + + + ++L+ +GS D I + +E + VL+GH + +
Sbjct: 465 HKRGIACLQYR--DRLVVSGSSDNTI-----RLWDIECGACL-----RVLEGHEELVRCI 512
Query: 165 AFSASHLISASEDKTVCLWDV 185
F ++S + D + +WD+
Sbjct: 513 RFDNKRIVSGAYDGKIKVWDL 533
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,335,989
Number of Sequences: 539616
Number of extensions: 4377500
Number of successful extensions: 18619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 760
Number of HSP's that attempted gapping in prelim test: 13602
Number of HSP's gapped (non-prelim): 4472
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)