Query 045370
Match_columns 350
No_of_seqs 482 out of 3336
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 22:21:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045370.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045370hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 2.2E-33 7.5E-38 242.3 25.3 190 1-229 133-330 (344)
2 3ow8_A WD repeat-containing pr 100.0 4.4E-32 1.5E-36 232.3 25.6 182 1-220 128-312 (321)
3 4gqb_B Methylosome protein 50; 100.0 3.3E-32 1.1E-36 234.9 22.9 194 1-228 88-287 (344)
4 1vyh_C Platelet-activating fac 100.0 3.9E-32 1.3E-36 240.6 24.0 189 1-228 156-367 (410)
5 2ynn_A Coatomer subunit beta'; 100.0 6.3E-32 2.1E-36 229.7 24.2 227 1-268 19-261 (304)
6 3ow8_A WD repeat-containing pr 100.0 6.3E-32 2.1E-36 231.3 23.8 189 1-228 86-277 (321)
7 1vyh_C Platelet-activating fac 100.0 4.4E-32 1.5E-36 240.2 23.4 182 1-220 114-318 (410)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-31 7.4E-36 230.4 26.1 188 1-220 22-216 (345)
9 2pm7_B Protein transport prote 100.0 1.1E-31 3.9E-36 227.3 23.8 187 1-220 15-229 (297)
10 4g56_B MGC81050 protein; prote 100.0 1.7E-31 5.8E-36 232.0 23.0 191 1-230 145-343 (357)
11 3frx_A Guanine nucleotide-bind 100.0 5.4E-31 1.8E-35 225.4 25.5 181 1-220 71-259 (319)
12 2ynn_A Coatomer subunit beta'; 100.0 1.2E-30 4.2E-35 221.7 26.4 190 1-228 61-257 (304)
13 1got_B GT-beta; complex (GTP-b 100.0 1.3E-30 4.3E-35 225.2 25.7 181 1-220 61-248 (340)
14 3iz6_a 40S ribosomal protein R 100.0 6E-31 2.1E-35 230.6 23.8 212 1-221 72-321 (380)
15 2pbi_B Guanine nucleotide-bind 100.0 1.5E-30 5.2E-35 225.8 25.8 184 1-221 160-349 (354)
16 1got_B GT-beta; complex (GTP-b 100.0 1.7E-30 5.8E-35 224.4 25.4 191 1-227 103-298 (340)
17 1erj_A Transcriptional repress 100.0 2E-30 6.9E-35 228.3 25.4 190 1-221 129-333 (393)
18 2pbi_B Guanine nucleotide-bind 100.0 4.7E-30 1.6E-34 222.7 25.7 182 1-220 70-262 (354)
19 4ery_A WD repeat-containing pr 100.0 1.5E-29 5.2E-34 215.7 28.3 182 1-220 29-214 (312)
20 3frx_A Guanine nucleotide-bind 100.0 7.9E-30 2.7E-34 218.2 26.0 186 1-220 23-218 (319)
21 3bg1_A Protein SEC13 homolog; 100.0 3.3E-31 1.1E-35 226.4 16.0 188 1-220 19-238 (316)
22 4e54_B DNA damage-binding prot 100.0 1.2E-30 4.2E-35 232.8 19.7 185 1-221 125-319 (435)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-29 3.8E-34 219.7 23.4 186 1-220 67-274 (345)
24 2xzm_R RACK1; ribosome, transl 100.0 1.6E-29 5.5E-34 218.5 22.9 179 1-219 82-276 (343)
25 4g56_B MGC81050 protein; prote 100.0 1.5E-29 5.1E-34 219.8 22.3 218 1-228 48-299 (357)
26 1nr0_A Actin interacting prote 100.0 7.2E-29 2.5E-33 230.6 27.1 214 1-220 65-346 (611)
27 4h5i_A Guanine nucleotide-exch 100.0 2.4E-29 8.2E-34 219.1 22.3 192 1-229 139-342 (365)
28 3iz6_a 40S ribosomal protein R 100.0 3.6E-29 1.2E-33 219.3 23.4 199 1-230 163-375 (380)
29 3mmy_A MRNA export factor; mRN 100.0 8.2E-29 2.8E-33 215.5 25.0 194 1-220 45-337 (368)
30 2xzm_R RACK1; ribosome, transl 100.0 1.6E-28 5.5E-33 212.3 26.4 188 4-221 35-236 (343)
31 3f3f_A Nucleoporin SEH1; struc 100.0 7.5E-29 2.6E-33 213.8 23.9 204 1-228 17-335 (351)
32 1erj_A Transcriptional repress 100.0 1E-28 3.6E-33 217.4 25.0 192 1-220 171-380 (393)
33 2hes_X YDR267CP; beta-propelle 100.0 8.2E-29 2.8E-33 212.9 23.5 190 1-220 64-271 (330)
34 3dwl_C Actin-related protein 2 100.0 7.4E-30 2.5E-34 223.4 17.1 184 1-220 17-227 (377)
35 2hes_X YDR267CP; beta-propelle 100.0 2.2E-28 7.6E-33 210.2 24.9 186 1-220 20-221 (330)
36 2ymu_A WD-40 repeat protein; u 100.0 1.2E-28 4E-33 227.7 24.8 180 1-221 391-572 (577)
37 3zwl_B Eukaryotic translation 100.0 4.2E-28 1.4E-32 211.1 25.8 193 1-221 38-241 (369)
38 3ei3_B DNA damage-binding prot 100.0 4.8E-28 1.6E-32 212.4 25.3 181 1-220 79-273 (383)
39 3dm0_A Maltose-binding peripla 100.0 1.2E-28 4.2E-33 232.5 22.8 181 1-220 436-624 (694)
40 2pm7_B Protein transport prote 100.0 4E-28 1.4E-32 205.5 23.6 195 1-227 59-282 (297)
41 3jrp_A Fusion protein of prote 100.0 2.6E-28 8.7E-33 213.3 22.5 188 1-221 17-232 (379)
42 3dw8_B Serine/threonine-protei 100.0 1.5E-28 5.2E-33 219.8 21.3 209 1-230 34-315 (447)
43 3dwl_C Actin-related protein 2 100.0 3.3E-29 1.1E-33 219.2 16.6 196 1-222 61-275 (377)
44 4ery_A WD repeat-containing pr 100.0 1.4E-27 4.9E-32 203.5 26.3 190 1-228 71-266 (312)
45 2ymu_A WD-40 repeat protein; u 100.0 3.3E-28 1.1E-32 224.7 24.1 212 1-270 350-564 (577)
46 1nr0_A Actin interacting prote 100.0 3.4E-28 1.2E-32 226.0 24.2 179 1-220 24-212 (611)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-28 4.3E-33 223.1 20.7 193 1-221 213-420 (524)
48 2pm9_A Protein WEB1, protein t 100.0 7.6E-28 2.6E-32 213.2 24.3 200 1-228 119-335 (416)
49 4aez_A CDC20, WD repeat-contai 100.0 1.3E-27 4.4E-32 211.1 25.2 224 1-268 140-382 (401)
50 3dm0_A Maltose-binding peripla 100.0 6.7E-28 2.3E-32 227.5 24.8 190 1-220 388-583 (694)
51 3vl1_A 26S proteasome regulato 100.0 1.3E-28 4.5E-33 218.5 18.6 182 1-221 62-270 (420)
52 3k26_A Polycomb protein EED; W 100.0 2.1E-28 7.2E-33 212.8 18.0 200 1-228 75-316 (366)
53 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-27 5.3E-32 208.0 23.1 186 1-220 14-224 (372)
54 3i2n_A WD repeat-containing pr 100.0 2.3E-27 7.7E-32 205.7 23.6 196 2-229 124-352 (357)
55 1gxr_A ESG1, transducin-like e 100.0 3.8E-27 1.3E-31 202.5 24.5 184 1-221 57-247 (337)
56 4aow_A Guanine nucleotide-bind 100.0 4.8E-27 1.6E-31 202.3 25.0 189 1-221 44-238 (340)
57 1gxr_A ESG1, transducin-like e 100.0 1E-26 3.4E-31 199.9 26.2 181 1-221 147-329 (337)
58 2xyi_A Probable histone-bindin 100.0 1.5E-27 5E-32 212.6 21.2 205 1-230 134-353 (430)
59 3jro_A Fusion protein of prote 100.0 3.2E-27 1.1E-31 224.4 24.4 228 1-265 15-284 (753)
60 1r5m_A SIR4-interacting protei 100.0 8.9E-27 3E-31 206.5 25.5 188 1-228 114-359 (425)
61 4gga_A P55CDC, cell division c 100.0 1.1E-26 3.8E-31 206.3 26.1 215 1-227 153-395 (420)
62 3ei3_B DNA damage-binding prot 100.0 3.3E-27 1.1E-31 207.1 22.4 197 1-228 169-380 (383)
63 2aq5_A Coronin-1A; WD40 repeat 100.0 3.3E-27 1.1E-31 208.5 22.3 199 1-229 87-298 (402)
64 2oaj_A Protein SNI1; WD40 repe 100.0 3.2E-27 1.1E-31 227.6 23.9 189 1-220 23-233 (902)
65 4a11_B DNA excision repair pro 100.0 1.4E-26 4.8E-31 204.3 26.0 197 1-221 49-268 (408)
66 3vl1_A 26S proteasome regulato 100.0 2.6E-27 8.9E-32 210.1 21.4 199 2-229 104-321 (420)
67 2pm9_A Protein WEB1, protein t 100.0 1.3E-27 4.4E-32 211.7 18.8 188 1-221 73-286 (416)
68 4aow_A Guanine nucleotide-bind 100.0 3.7E-26 1.3E-30 196.8 27.1 215 1-227 92-334 (340)
69 2xyi_A Probable histone-bindin 100.0 9.2E-27 3.1E-31 207.4 23.0 197 1-227 187-407 (430)
70 2aq5_A Coronin-1A; WD40 repeat 100.0 9.5E-27 3.2E-31 205.5 22.9 195 2-229 41-253 (402)
71 3mkq_A Coatomer beta'-subunit; 100.0 7.2E-27 2.5E-31 224.3 23.8 184 1-221 19-209 (814)
72 4ggc_A P55CDC, cell division c 100.0 3.1E-26 1.1E-30 195.3 25.1 208 1-220 73-306 (318)
73 3bg1_A Protein SEC13 homolog; 100.0 1.7E-27 5.9E-32 203.4 17.0 194 1-227 63-290 (316)
74 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-26 4.6E-31 200.2 22.0 217 2-228 43-290 (343)
75 4gq1_A NUP37; propeller, trans 100.0 1.8E-27 6.2E-32 209.4 16.7 198 1-226 142-388 (393)
76 1r5m_A SIR4-interacting protei 100.0 1.5E-26 5.3E-31 205.0 22.6 213 1-228 51-317 (425)
77 1sq9_A Antiviral protein SKI8; 100.0 4.1E-27 1.4E-31 207.3 18.5 181 1-220 68-313 (397)
78 3odt_A Protein DOA1; ubiquitin 100.0 6.2E-26 2.1E-30 193.0 25.2 211 1-229 65-295 (313)
79 1sq9_A Antiviral protein SKI8; 100.0 3E-26 1E-30 201.7 23.7 188 1-221 127-387 (397)
80 1k8k_C P40, ARP2/3 complex 41 99.9 1.4E-26 4.9E-31 201.8 21.3 188 1-216 58-262 (372)
81 2j04_B YDR362CP, TAU91; beta p 99.9 4.2E-27 1.4E-31 213.1 17.8 191 4-228 170-384 (524)
82 3jrp_A Fusion protein of prote 99.9 3.1E-26 1E-30 200.1 22.5 196 1-228 61-285 (379)
83 3i2n_A WD repeat-containing pr 99.9 2E-26 6.9E-31 199.7 21.1 231 1-270 71-336 (357)
84 2w18_A PALB2, fancn, partner a 99.9 4E-26 1.4E-30 191.0 21.8 214 1-226 117-353 (356)
85 3k26_A Polycomb protein EED; W 99.9 3.9E-26 1.3E-30 198.5 22.4 182 1-221 24-252 (366)
86 1yfq_A Cell cycle arrest prote 99.9 2.8E-26 9.7E-31 197.7 21.0 193 1-221 17-217 (342)
87 3gre_A Serine/threonine-protei 99.9 4.5E-26 1.5E-30 203.3 21.9 194 1-228 69-290 (437)
88 3sfz_A APAF-1, apoptotic pepti 99.9 7.4E-26 2.5E-30 226.6 25.6 156 1-194 621-781 (1249)
89 3lrv_A PRE-mRNA-splicing facto 99.9 1.5E-26 5.1E-31 199.9 17.3 152 64-231 76-245 (343)
90 3v7d_B Cell division control p 99.9 3.4E-25 1.2E-29 199.2 26.6 189 3-220 128-332 (464)
91 2j04_A TAU60, YPL007P, hypothe 99.9 5.9E-26 2E-30 201.9 20.9 211 1-229 21-253 (588)
92 4aez_A CDC20, WD repeat-contai 99.9 2E-25 6.9E-30 196.9 24.1 186 3-227 99-290 (401)
93 3zwl_B Eukaryotic translation 99.9 1.5E-25 5.2E-30 194.8 22.7 181 1-220 80-281 (369)
94 4e54_B DNA damage-binding prot 99.9 4.8E-26 1.6E-30 203.1 19.6 184 1-219 170-365 (435)
95 3v7d_B Cell division control p 99.9 3.2E-25 1.1E-29 199.3 24.9 179 1-221 168-373 (464)
96 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-25 3.9E-30 200.1 19.9 179 1-221 91-290 (588)
97 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.9E-25 6.5E-30 200.1 21.5 191 1-228 108-337 (450)
98 3vu4_A KMHSV2; beta-propeller 99.9 4.5E-25 1.5E-29 191.5 22.9 190 1-220 25-262 (355)
99 4h5i_A Guanine nucleotide-exch 99.9 3.8E-25 1.3E-29 192.6 22.4 148 63-220 132-291 (365)
100 3sfz_A APAF-1, apoptotic pepti 99.9 5.6E-26 1.9E-30 227.5 19.3 185 1-225 1009-1205(1249)
101 4gga_A P55CDC, cell division c 99.9 2.3E-24 7.9E-29 191.3 27.5 192 1-229 111-352 (420)
102 3mkq_A Coatomer beta'-subunit; 99.9 4.8E-25 1.6E-29 211.6 24.5 182 1-220 61-250 (814)
103 3odt_A Protein DOA1; ubiquitin 99.9 9.6E-25 3.3E-29 185.6 23.7 201 1-220 24-246 (313)
104 3gre_A Serine/threonine-protei 99.9 7.8E-26 2.7E-30 201.8 17.5 191 3-221 178-432 (437)
105 4gq1_A NUP37; propeller, trans 99.9 3.8E-26 1.3E-30 201.0 15.1 177 3-201 97-300 (393)
106 3jro_A Fusion protein of prote 99.9 2.4E-25 8.3E-30 211.4 21.4 197 1-229 59-284 (753)
107 4a11_B DNA excision repair pro 99.9 2.3E-24 8E-29 190.0 25.5 199 1-228 105-363 (408)
108 1yfq_A Cell cycle arrest prote 99.9 1.5E-25 5.2E-30 193.1 17.4 187 1-228 62-280 (342)
109 1pgu_A Actin interacting prote 99.9 8.4E-25 2.9E-29 203.2 23.6 180 1-220 24-229 (615)
110 4ggc_A P55CDC, cell division c 99.9 7E-24 2.4E-28 180.7 27.3 192 1-229 31-272 (318)
111 3dw8_B Serine/threonine-protei 99.9 3.5E-25 1.2E-29 197.9 19.7 212 1-221 99-365 (447)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.7E-25 3E-29 195.8 21.9 152 61-220 99-262 (450)
113 2oaj_A Protein SNI1; WD40 repe 99.9 2.6E-25 8.9E-30 214.4 19.0 203 1-226 441-731 (902)
114 1p22_A F-BOX/WD-repeat protein 99.9 4.7E-24 1.6E-28 190.3 25.8 178 2-220 138-316 (435)
115 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6.4E-24 2.2E-28 189.9 24.1 210 2-229 206-441 (445)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.3E-23 4.3E-28 188.0 25.2 175 2-220 124-299 (445)
117 1p22_A F-BOX/WD-repeat protein 99.9 1.8E-23 6.3E-28 186.4 24.8 174 3-220 179-356 (435)
118 1pgu_A Actin interacting prote 99.9 1.8E-23 6E-28 194.3 23.1 187 1-220 70-274 (615)
119 3f3f_A Nucleoporin SEH1; struc 99.9 6.8E-23 2.3E-27 176.4 18.9 176 1-194 63-344 (351)
120 1l0q_A Surface layer protein; 99.9 3.7E-22 1.3E-26 175.3 23.7 187 1-227 37-230 (391)
121 3vu4_A KMHSV2; beta-propeller 99.9 2.7E-22 9.2E-27 174.0 21.3 202 2-220 65-327 (355)
122 3bws_A Protein LP49; two-domai 99.9 5.5E-22 1.9E-26 176.6 21.5 180 1-219 175-365 (433)
123 2w18_A PALB2, fancn, partner a 99.9 2.3E-22 8E-27 168.3 17.3 144 2-185 185-355 (356)
124 3mmy_A MRNA export factor; mRN 99.9 1.4E-21 4.8E-26 169.7 21.3 126 53-189 28-162 (368)
125 1l0q_A Surface layer protein; 99.9 7.6E-21 2.6E-25 166.9 25.4 188 1-228 79-273 (391)
126 3bws_A Protein LP49; two-domai 99.9 2.7E-21 9.2E-26 172.1 21.2 188 1-228 128-332 (433)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-21 6.5E-26 172.8 15.8 192 1-217 42-259 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 4E-20 1.4E-24 163.6 23.5 179 1-221 184-376 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.8 5.4E-20 1.8E-24 163.4 19.0 198 1-218 98-321 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.7E-19 2.6E-23 155.4 23.4 172 7-219 143-331 (415)
131 2ojh_A Uncharacterized protein 99.8 1.4E-18 4.8E-23 145.9 19.3 180 1-219 47-237 (297)
132 1nir_A Nitrite reductase; hemo 99.8 1.5E-18 5.3E-23 158.2 20.6 195 2-226 144-351 (543)
133 3u4y_A Uncharacterized protein 99.8 7E-18 2.4E-22 144.5 21.5 192 1-227 45-249 (331)
134 2ojh_A Uncharacterized protein 99.8 2E-18 6.7E-23 145.0 17.5 184 1-220 90-293 (297)
135 1nir_A Nitrite reductase; hemo 99.8 5.6E-18 1.9E-22 154.5 20.1 183 1-217 227-439 (543)
136 2ecf_A Dipeptidyl peptidase IV 99.8 9.3E-18 3.2E-22 159.4 19.7 209 1-218 42-305 (741)
137 3vgz_A Uncharacterized protein 99.8 3.9E-17 1.3E-21 141.0 21.9 188 1-226 46-258 (353)
138 1ri6_A Putative isomerase YBHE 99.8 3.1E-17 1.1E-21 140.9 20.9 197 1-228 43-260 (343)
139 1ri6_A Putative isomerase YBHE 99.8 3.2E-17 1.1E-21 140.8 20.4 195 1-227 89-305 (343)
140 3vgz_A Uncharacterized protein 99.8 9.4E-17 3.2E-21 138.6 23.4 192 1-228 94-301 (353)
141 1xfd_A DIP, dipeptidyl aminope 99.8 5.8E-18 2E-22 160.4 14.3 187 1-218 22-274 (723)
142 3hfq_A Uncharacterized protein 99.8 2.1E-16 7.1E-21 136.3 21.9 204 1-228 91-315 (347)
143 1pby_B Quinohemoprotein amine 99.7 2.7E-16 9.4E-21 134.6 21.4 194 1-228 39-308 (337)
144 1k32_A Tricorn protease; prote 99.7 5.8E-17 2E-21 159.5 18.5 177 1-219 301-492 (1045)
145 3o4h_A Acylamino-acid-releasin 99.7 1.3E-16 4.5E-21 147.4 19.7 203 1-220 27-267 (582)
146 3u4y_A Uncharacterized protein 99.7 6.1E-16 2.1E-20 132.4 22.4 186 2-227 4-204 (331)
147 2ecf_A Dipeptidyl peptidase IV 99.7 6.6E-17 2.3E-21 153.6 17.7 181 1-220 114-358 (741)
148 1jmx_B Amine dehydrogenase; ox 99.7 6.5E-16 2.2E-20 133.0 21.1 158 1-195 5-183 (349)
149 3hfq_A Uncharacterized protein 99.7 7.7E-16 2.6E-20 132.8 20.9 192 1-227 45-268 (347)
150 3scy_A Hypothetical bacterial 99.7 2.9E-15 1E-19 129.9 24.4 153 67-226 157-333 (361)
151 1k32_A Tricorn protease; prote 99.7 1.6E-16 5.3E-21 156.4 18.1 187 2-219 251-441 (1045)
152 1pby_B Quinohemoprotein amine 99.7 1.4E-15 4.8E-20 130.2 21.3 148 8-195 2-171 (337)
153 2z3z_A Dipeptidyl aminopeptida 99.7 3.3E-16 1.1E-20 148.0 18.1 143 67-219 183-376 (706)
154 1z68_A Fibroblast activation p 99.7 3.6E-17 1.2E-21 154.9 11.0 186 1-217 21-271 (719)
155 1xfd_A DIP, dipeptidyl aminope 99.7 5.8E-16 2E-20 146.7 17.4 183 1-216 66-323 (723)
156 1jmx_B Amine dehydrogenase; ox 99.7 2.8E-15 9.4E-20 129.1 19.7 193 1-228 48-323 (349)
157 2z3z_A Dipeptidyl aminopeptida 99.7 4.4E-15 1.5E-19 140.3 19.6 146 62-219 255-421 (706)
158 3o4h_A Acylamino-acid-releasin 99.6 2.8E-15 9.7E-20 138.4 16.6 170 2-220 116-303 (582)
159 4a5s_A Dipeptidyl peptidase 4 99.6 1.3E-15 4.4E-20 144.6 14.0 184 1-217 22-278 (740)
160 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.5E-14 5.3E-19 125.6 19.5 197 1-228 88-339 (365)
161 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.4E-14 4.8E-19 125.9 19.2 181 1-219 45-275 (365)
162 1z68_A Fibroblast activation p 99.6 1.7E-15 5.8E-20 143.4 12.1 183 1-215 65-328 (719)
163 3fvz_A Peptidyl-glycine alpha- 99.6 6.8E-14 2.3E-18 119.7 19.9 188 1-223 96-316 (329)
164 1xip_A Nucleoporin NUP159; bet 99.6 5.5E-14 1.9E-18 121.2 18.5 177 1-216 43-231 (388)
165 1q7f_A NHL, brain tumor CG1071 99.6 1.3E-12 4.4E-17 109.3 23.4 179 1-220 35-228 (286)
166 3pe7_A Oligogalacturonate lyas 99.6 4.3E-13 1.5E-17 117.2 20.5 177 2-218 42-257 (388)
167 3scy_A Hypothetical bacterial 99.6 3.7E-13 1.3E-17 116.6 19.5 182 1-207 160-360 (361)
168 3pe7_A Oligogalacturonate lyas 99.5 2.8E-12 9.7E-17 112.0 21.9 178 1-216 86-307 (388)
169 1q7f_A NHL, brain tumor CG1071 99.5 7.8E-12 2.7E-16 104.5 22.4 181 2-226 83-276 (286)
170 4a5s_A Dipeptidyl peptidase 4 99.5 2.2E-13 7.6E-18 129.3 14.1 180 2-219 68-340 (740)
171 3azo_A Aminopeptidase; POP fam 99.5 8.8E-13 3E-17 123.6 17.9 175 1-211 135-347 (662)
172 2oiz_A Aromatic amine dehydrog 99.5 2.3E-12 7.9E-17 111.5 18.2 87 112-211 259-360 (361)
173 3azo_A Aminopeptidase; POP fam 99.5 1.1E-12 3.8E-17 122.9 17.0 187 2-220 30-263 (662)
174 3fvz_A Peptidyl-glycine alpha- 99.5 9.7E-12 3.3E-16 106.3 21.2 179 1-208 29-250 (329)
175 3e5z_A Putative gluconolactona 99.5 7.2E-12 2.5E-16 105.3 19.7 174 1-216 33-235 (296)
176 2dg1_A DRP35, lactonase; beta 99.4 4.3E-11 1.5E-15 102.3 22.8 183 1-223 50-257 (333)
177 3e5z_A Putative gluconolactona 99.4 1.6E-11 5.6E-16 103.2 19.8 184 1-225 74-282 (296)
178 2oiz_A Aromatic amine dehydrog 99.4 3.1E-11 1.1E-15 104.4 22.0 106 5-140 13-143 (361)
179 3no2_A Uncharacterized protein 99.4 1.2E-11 4.2E-16 102.7 18.0 181 5-223 3-189 (276)
180 1rwi_B Serine/threonine-protei 99.4 2.1E-11 7.2E-16 100.9 19.4 184 1-223 72-258 (270)
181 1rwi_B Serine/threonine-protei 99.4 2.8E-11 9.4E-16 100.2 18.1 185 1-224 29-217 (270)
182 3c5m_A Oligogalacturonate lyas 99.4 5E-12 1.7E-16 110.6 13.9 193 2-217 87-301 (396)
183 3c5m_A Oligogalacturonate lyas 99.4 4E-12 1.4E-16 111.2 12.7 179 1-219 41-258 (396)
184 2dg1_A DRP35, lactonase; beta 99.4 2E-10 6.7E-15 98.2 22.8 188 1-220 92-301 (333)
185 2xdw_A Prolyl endopeptidase; a 99.4 3.5E-11 1.2E-15 113.7 19.6 187 1-220 130-357 (710)
186 2gop_A Trilobed protease; beta 99.4 3.9E-11 1.3E-15 103.1 17.5 170 1-220 64-283 (347)
187 1qks_A Cytochrome CD1 nitrite 99.3 2E-10 6.9E-15 104.7 22.1 185 5-219 165-362 (567)
188 3dsm_A Uncharacterized protein 99.3 1.1E-10 3.9E-15 99.5 18.6 176 1-217 89-285 (328)
189 2gop_A Trilobed protease; beta 99.3 1.3E-10 4.4E-15 99.8 18.9 134 66-221 172-322 (347)
190 2xdw_A Prolyl endopeptidase; a 99.3 2.3E-10 7.9E-15 108.1 22.0 183 1-216 176-397 (710)
191 3g4e_A Regucalcin; six bladed 99.3 8.3E-10 2.9E-14 92.8 22.7 149 65-219 98-262 (297)
192 3dsm_A Uncharacterized protein 99.3 7.7E-10 2.6E-14 94.4 20.3 170 7-218 54-244 (328)
193 2bkl_A Prolyl endopeptidase; m 99.3 1.6E-10 5.3E-15 109.0 17.5 177 1-219 126-339 (695)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.7E-09 5.9E-14 91.3 21.7 152 65-223 117-293 (314)
195 3no2_A Uncharacterized protein 99.3 7.3E-10 2.5E-14 92.0 18.9 172 2-217 43-231 (276)
196 1xip_A Nucleoporin NUP159; bet 99.2 7.8E-11 2.7E-15 101.6 13.1 130 1-170 93-225 (388)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.5E-09 5.2E-14 91.7 19.9 182 1-223 23-250 (314)
198 2z2n_A Virginiamycin B lyase; 99.2 4.1E-09 1.4E-13 88.2 22.3 182 1-223 20-207 (299)
199 3hrp_A Uncharacterized protein 99.2 3.4E-09 1.1E-13 93.1 22.3 192 1-223 176-404 (409)
200 2bkl_A Prolyl endopeptidase; m 99.2 8.6E-10 3E-14 103.9 19.8 183 1-216 173-380 (695)
201 2z2n_A Virginiamycin B lyase; 99.2 6.4E-09 2.2E-13 87.0 22.8 185 1-225 62-251 (299)
202 2ghs_A AGR_C_1268P; regucalcin 99.2 9.8E-09 3.3E-13 87.4 22.8 146 65-219 134-292 (326)
203 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-08 4.4E-13 92.9 24.1 179 1-214 202-404 (567)
204 2qe8_A Uncharacterized protein 99.2 2.1E-09 7.2E-14 92.3 17.4 191 1-220 72-312 (343)
205 1yr2_A Prolyl oligopeptidase; 99.1 3.3E-09 1.1E-13 100.7 20.2 179 1-219 168-383 (741)
206 3hrp_A Uncharacterized protein 99.1 3.6E-09 1.2E-13 92.9 18.7 179 1-217 136-341 (409)
207 2iwa_A Glutamine cyclotransfer 99.1 1.1E-08 3.8E-13 83.3 19.0 182 1-219 26-226 (266)
208 2mad_H Methylamine dehydrogena 99.1 3.4E-08 1.2E-12 85.6 23.3 194 1-228 130-348 (373)
209 2qc5_A Streptogramin B lactona 99.1 4.5E-08 1.6E-12 81.8 23.2 184 1-224 67-255 (300)
210 2qc5_A Streptogramin B lactona 99.1 5.1E-08 1.7E-12 81.5 23.1 184 1-224 25-213 (300)
211 3dr2_A Exported gluconolactona 99.1 6.3E-09 2.2E-13 87.7 17.1 142 66-219 132-297 (305)
212 2ghs_A AGR_C_1268P; regucalcin 99.1 5.9E-08 2E-12 82.6 22.5 177 2-223 55-254 (326)
213 3nol_A Glutamine cyclotransfer 99.1 3.2E-08 1.1E-12 79.6 19.4 180 1-219 48-245 (262)
214 3g4e_A Regucalcin; six bladed 99.1 3.4E-08 1.2E-12 82.8 20.3 179 2-224 19-224 (297)
215 3nok_A Glutaminyl cyclase; bet 99.0 5.8E-08 2E-12 78.2 20.0 178 2-218 61-254 (268)
216 1yr2_A Prolyl oligopeptidase; 99.0 3.8E-08 1.3E-12 93.4 21.2 180 1-214 214-422 (741)
217 3iuj_A Prolyl endopeptidase; h 99.0 1.5E-08 5.1E-13 95.4 17.8 178 1-220 134-347 (693)
218 3mbr_X Glutamine cyclotransfer 99.0 5.3E-07 1.8E-11 71.9 22.2 180 2-218 27-223 (243)
219 3sjl_D Methylamine dehydrogena 98.9 8.4E-08 2.9E-12 82.4 18.5 196 1-209 142-384 (386)
220 2ece_A 462AA long hypothetical 98.9 1.1E-07 3.6E-12 82.6 18.7 188 2-218 144-400 (462)
221 3c75_H MADH, methylamine dehyd 98.9 4.1E-08 1.4E-12 85.8 15.7 64 164-228 324-400 (426)
222 3dr2_A Exported gluconolactona 98.9 1.3E-07 4.5E-12 79.6 18.3 172 2-216 51-256 (305)
223 2qe8_A Uncharacterized protein 98.8 1E-07 3.5E-12 81.7 16.0 201 1-223 22-272 (343)
224 3sjl_D Methylamine dehydrogena 98.8 3E-07 1E-11 79.0 18.5 145 3-191 40-213 (386)
225 2hz6_A Endoplasmic reticulum t 98.8 8.1E-10 2.8E-14 95.8 0.4 145 6-195 8-157 (369)
226 2hz6_A Endoplasmic reticulum t 98.8 1.9E-09 6.6E-14 93.4 2.3 118 78-211 93-216 (369)
227 2mad_H Methylamine dehydrogena 98.7 3.3E-06 1.1E-10 73.0 21.7 145 3-193 28-201 (373)
228 1npe_A Nidogen, entactin; glyc 98.7 9.8E-06 3.3E-10 66.6 23.5 179 1-219 41-227 (267)
229 1fwx_A Nitrous oxide reductase 98.7 2.8E-07 9.5E-12 82.8 14.4 138 87-225 254-416 (595)
230 1yiq_A Quinohemoprotein alcoho 98.7 2.8E-06 9.7E-11 79.6 20.3 129 79-218 321-538 (689)
231 1fwx_A Nitrous oxide reductase 98.6 2.1E-06 7.3E-11 77.1 18.3 224 5-258 99-413 (595)
232 3iuj_A Prolyl endopeptidase; h 98.6 4.1E-06 1.4E-10 78.8 20.5 180 1-217 180-389 (693)
233 1kb0_A Quinohemoprotein alcoho 98.6 2.2E-06 7.5E-11 80.2 17.7 126 78-214 328-535 (677)
234 1mda_H Methylamine dehydrogena 98.6 1.8E-06 6.2E-11 74.2 15.1 85 112-208 269-366 (368)
235 1mda_H Methylamine dehydrogena 98.6 2.7E-06 9.3E-11 73.1 16.0 82 53-137 55-158 (368)
236 3c75_H MADH, methylamine dehyd 98.5 5.3E-06 1.8E-10 72.5 17.3 170 5-218 82-284 (426)
237 1npe_A Nidogen, entactin; glyc 98.5 6E-05 2E-09 61.8 22.6 145 65-220 36-188 (267)
238 2ece_A 462AA long hypothetical 98.5 1.7E-05 5.9E-10 68.9 19.7 187 5-226 93-348 (462)
239 3hxj_A Pyrrolo-quinoline quino 98.5 5.8E-06 2E-10 70.0 16.5 140 64-222 176-317 (330)
240 2fp8_A Strictosidine synthase; 98.4 2E-05 6.7E-10 66.7 17.8 186 1-218 24-248 (322)
241 3hxj_A Pyrrolo-quinoline quino 98.4 1.5E-05 5.1E-10 67.4 16.2 142 64-224 136-279 (330)
242 2fp8_A Strictosidine synthase; 98.3 0.00015 5E-09 61.3 21.4 147 66-223 127-307 (322)
243 3v64_C Agrin; beta propeller, 98.3 0.00036 1.2E-08 59.6 22.6 150 65-225 116-271 (349)
244 3q7m_A Lipoprotein YFGL, BAMB; 98.3 5.8E-05 2E-09 65.3 17.7 133 78-223 240-372 (376)
245 3v65_B Low-density lipoprotein 98.3 0.00026 8.7E-09 61.5 21.1 150 65-225 159-314 (386)
246 3qqz_A Putative uncharacterize 98.2 0.00041 1.4E-08 56.0 20.4 192 1-224 32-248 (255)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00015 5.2E-09 62.6 18.9 198 6-222 102-330 (376)
248 1flg_A Protein (quinoprotein e 98.2 0.00012 4.2E-09 67.0 18.9 131 78-218 337-549 (582)
249 1kb0_A Quinohemoprotein alcoho 98.2 0.00012 4E-09 68.6 18.8 151 69-221 247-499 (677)
250 1ijq_A LDL receptor, low-densi 98.2 0.002 6.8E-08 54.2 24.8 150 65-225 77-234 (316)
251 2p4o_A Hypothetical protein; p 98.2 0.00066 2.3E-08 56.8 21.7 191 1-225 37-238 (306)
252 3nol_A Glutamine cyclotransfer 98.2 0.00012 4.1E-09 59.0 15.8 139 62-214 38-186 (262)
253 3v65_B Low-density lipoprotein 98.2 0.00099 3.4E-08 57.8 22.6 149 63-221 114-268 (386)
254 2ad6_A Methanol dehydrogenase 98.1 0.00038 1.3E-08 63.7 20.8 129 78-217 317-525 (571)
255 2xe4_A Oligopeptidase B; hydro 98.1 0.0002 6.8E-09 67.9 19.2 148 2-187 180-354 (751)
256 3v64_C Agrin; beta propeller, 98.1 0.0017 5.7E-08 55.5 22.9 149 63-221 71-225 (349)
257 1ijq_A LDL receptor, low-densi 98.1 0.0027 9.3E-08 53.3 24.0 147 63-220 28-185 (316)
258 2iwa_A Glutamine cyclotransfer 98.1 0.00017 5.8E-09 58.6 15.0 135 67-215 23-167 (266)
259 1yiq_A Quinohemoprotein alcoho 98.1 0.00023 7.8E-09 66.8 17.8 72 69-141 239-342 (689)
260 2p4o_A Hypothetical protein; p 98.0 0.002 6.7E-08 53.9 20.6 132 76-219 127-278 (306)
261 3mbr_X Glutamine cyclotransfer 98.0 0.0014 4.7E-08 52.3 18.2 139 62-214 16-164 (243)
262 3sov_A LRP-6, low-density lipo 98.0 0.0033 1.1E-07 52.9 21.7 133 65-207 79-217 (318)
263 3nok_A Glutaminyl cyclase; bet 98.0 0.00058 2E-08 55.0 16.1 138 62-214 50-195 (268)
264 3p5b_L Low density lipoprotein 98.0 0.0046 1.6E-07 53.8 23.3 149 62-220 109-267 (400)
265 3p5b_L Low density lipoprotein 98.0 0.006 2E-07 53.1 23.9 134 63-206 157-298 (400)
266 1kv9_A Type II quinohemoprotei 97.9 0.00096 3.3E-08 62.3 19.6 129 79-218 316-521 (668)
267 1w6s_A Methanol dehydrogenase 97.9 0.0019 6.5E-08 59.2 21.0 48 171-218 487-536 (599)
268 4a2l_A BT_4663, two-component 97.9 0.0041 1.4E-07 59.4 23.8 145 64-217 356-516 (795)
269 3tc9_A Hypothetical hydrolase; 97.9 0.00075 2.6E-08 59.4 16.8 143 66-219 138-290 (430)
270 3sov_A LRP-6, low-density lipo 97.9 0.0045 1.5E-07 52.0 20.8 134 63-206 120-257 (318)
271 2p9w_A MAL S 1 allergenic prot 97.8 0.0021 7.3E-08 53.5 17.5 166 61-226 9-212 (334)
272 1w6s_A Methanol dehydrogenase 97.8 0.0036 1.2E-07 57.5 20.5 110 85-195 180-350 (599)
273 3qqz_A Putative uncharacterize 97.8 0.0048 1.6E-07 49.8 18.7 161 59-222 21-196 (255)
274 3m0c_C LDL receptor, low-densi 97.8 0.0093 3.2E-07 56.5 23.4 145 63-219 469-621 (791)
275 4a2l_A BT_4663, two-component 97.8 0.0083 2.8E-07 57.3 23.2 146 64-218 262-425 (795)
276 4hw6_A Hypothetical protein, I 97.7 0.007 2.4E-07 53.2 20.4 151 65-218 228-421 (433)
277 2ad6_A Methanol dehydrogenase 97.7 0.0041 1.4E-07 56.9 19.5 109 86-195 175-343 (571)
278 3amr_A 3-phytase; beta-propell 97.7 0.017 5.7E-07 48.7 21.2 188 6-228 39-261 (355)
279 3m0c_C LDL receptor, low-densi 97.7 0.019 6.6E-07 54.4 23.7 148 62-219 421-578 (791)
280 2p9w_A MAL S 1 allergenic prot 97.7 0.0043 1.5E-07 51.7 17.0 154 2-188 19-216 (334)
281 3tc9_A Hypothetical hydrolase; 97.6 0.002 6.8E-08 56.7 15.2 147 1-186 142-300 (430)
282 1kv9_A Type II quinohemoprotei 97.6 0.0039 1.3E-07 58.2 17.9 108 86-194 177-340 (668)
283 1n7d_A LDL receptor, low-densi 97.6 0.00065 2.2E-08 63.7 12.4 112 66-187 454-571 (699)
284 4a0p_A LRP6, LRP-6, low-densit 97.6 0.028 9.6E-07 51.9 22.7 132 65-208 80-217 (628)
285 1k3i_A Galactose oxidase precu 97.6 0.0037 1.3E-07 58.3 17.1 102 110-218 402-530 (656)
286 1k3i_A Galactose oxidase precu 97.5 0.0058 2E-07 57.0 18.2 71 68-139 246-325 (656)
287 3sre_A PON1, serum paraoxonase 97.5 0.023 7.9E-07 48.3 20.1 146 64-223 111-292 (355)
288 4hw6_A Hypothetical protein, I 97.5 0.0032 1.1E-07 55.4 15.1 143 65-219 139-293 (433)
289 3pbp_A Nucleoporin NUP82; beta 97.5 0.026 8.8E-07 48.7 19.7 137 76-215 31-196 (452)
290 2xbg_A YCF48-like protein; pho 97.4 0.031 1.1E-06 47.1 19.6 152 62-225 160-318 (327)
291 3s94_A LRP-6, low-density lipo 97.4 0.022 7.5E-07 52.6 19.5 135 65-209 84-224 (619)
292 3v9f_A Two-component system se 97.3 0.047 1.6E-06 52.0 21.9 145 64-217 406-557 (781)
293 2xe4_A Oligopeptidase B; hydro 97.3 0.0046 1.6E-07 58.6 14.5 142 66-217 175-338 (751)
294 1n7d_A LDL receptor, low-densi 97.3 0.0016 5.6E-08 61.0 10.9 135 65-207 496-634 (699)
295 3v9f_A Two-component system se 97.3 0.036 1.2E-06 52.8 20.4 142 64-217 362-513 (781)
296 3kya_A Putative phosphatase; s 97.3 0.0088 3E-07 53.1 14.7 152 66-224 140-336 (496)
297 3amr_A 3-phytase; beta-propell 97.2 0.015 5.1E-07 48.9 15.0 143 77-226 40-207 (355)
298 4a0p_A LRP6, LRP-6, low-densit 97.2 0.11 3.7E-06 48.0 21.7 121 63-194 121-244 (628)
299 3pbp_A Nucleoporin NUP82; beta 97.2 0.064 2.2E-06 46.3 18.4 115 66-183 67-208 (452)
300 3s94_A LRP-6, low-density lipo 97.0 0.19 6.5E-06 46.3 22.9 149 65-225 392-547 (619)
301 3kya_A Putative phosphatase; s 97.0 0.093 3.2E-06 46.6 18.9 119 65-185 186-339 (496)
302 2xbg_A YCF48-like protein; pho 96.9 0.16 5.5E-06 42.6 22.2 138 65-217 122-268 (327)
303 1flg_A Protein (quinoprotein e 96.8 0.18 6.3E-06 46.1 19.6 116 79-195 170-363 (582)
304 2ism_A Putative oxidoreductase 96.7 0.2 6.8E-06 42.6 18.4 96 1-124 36-152 (352)
305 1tl2_A L10, protein (tachylect 96.3 0.078 2.7E-06 41.4 11.3 150 65-225 41-206 (236)
306 1tl2_A L10, protein (tachylect 96.2 0.081 2.8E-06 41.3 11.3 136 77-223 4-157 (236)
307 2xn4_A Kelch-like protein 2; s 96.0 0.52 1.8E-05 38.7 17.2 132 76-219 108-261 (302)
308 2ism_A Putative oxidoreductase 96.0 0.54 1.9E-05 39.8 16.7 60 159-218 268-334 (352)
309 2vpj_A Kelch-like protein 12; 95.8 0.61 2.1E-05 38.3 17.9 105 76-190 112-234 (301)
310 3a9g_A Putative uncharacterize 95.8 0.74 2.5E-05 39.1 17.2 96 1-124 34-152 (354)
311 2xzh_A Clathrin heavy chain 1; 95.7 0.77 2.6E-05 38.3 21.6 215 3-220 74-323 (365)
312 3sre_A PON1, serum paraoxonase 95.7 0.52 1.8E-05 40.0 15.1 133 85-226 81-248 (355)
313 2g8s_A Glucose/sorbosone dehyd 95.4 0.59 2E-05 39.6 14.8 25 1-25 23-47 (353)
314 1zgk_A Kelch-like ECH-associat 95.4 0.81 2.8E-05 37.8 15.3 105 76-190 121-243 (308)
315 3ii7_A Kelch-like protein 7; p 95.4 0.88 3E-05 37.4 15.5 132 76-219 101-257 (306)
316 1bpo_A Protein (clathrin); cla 95.2 1.4 4.8E-05 38.3 24.5 157 64-223 105-325 (494)
317 3a9g_A Putative uncharacterize 95.1 1.3 4.6E-05 37.5 16.0 145 64-216 28-215 (354)
318 2xn4_A Kelch-like protein 2; s 95.1 0.8 2.7E-05 37.6 14.3 104 76-189 155-278 (302)
319 2be1_A Serine/threonine-protei 95.0 0.11 3.8E-06 43.7 8.8 112 78-195 11-138 (339)
320 2vpj_A Kelch-like protein 12; 95.0 1.2 4.2E-05 36.4 17.4 105 76-190 62-187 (301)
321 2uvk_A YJHT; unknown function, 94.3 2.1 7.1E-05 36.1 15.3 48 87-135 168-224 (357)
322 2zwa_A Leucine carboxyl methyl 93.9 1.8 6E-05 40.6 15.1 114 76-191 500-639 (695)
323 2zwa_A Leucine carboxyl methyl 93.9 4.2 0.00014 38.0 18.3 109 76-189 451-579 (695)
324 3ei3_A DNA damage-binding prot 93.7 2.6 9E-05 41.9 16.4 114 61-187 882-999 (1158)
325 3sbq_A Nitrous-oxide reductase 93.6 1.3 4.4E-05 39.8 12.4 130 89-218 300-454 (638)
326 2woz_A Kelch repeat and BTB do 93.5 2.7 9.3E-05 34.7 16.1 104 76-189 109-233 (318)
327 3das_A Putative oxidoreductase 93.4 3.1 0.00011 35.0 17.0 154 60-216 27-219 (347)
328 1cru_A Protein (soluble quinop 93.3 4 0.00014 35.9 18.3 100 1-125 32-162 (454)
329 1xi4_A Clathrin heavy chain; a 93.3 2.5 8.5E-05 42.6 15.0 196 4-202 74-304 (1630)
330 1cru_A Protein (soluble quinop 93.1 4.2 0.00014 35.8 17.6 61 64-125 26-98 (454)
331 3ii7_A Kelch-like protein 7; p 93.0 3.2 0.00011 33.9 17.6 63 76-139 55-129 (306)
332 4asc_A Kelch repeat and BTB do 92.9 3.4 0.00012 34.0 18.5 104 76-189 98-223 (315)
333 1zgk_A Kelch-like ECH-associat 92.7 3.6 0.00012 33.8 15.9 104 76-189 70-195 (308)
334 2woz_A Kelch repeat and BTB do 92.4 4 0.00014 33.6 14.0 63 76-139 158-233 (318)
335 3s25_A Hypothetical 7-bladed b 92.4 4.1 0.00014 33.6 16.7 110 87-219 88-204 (302)
336 3ei3_A DNA damage-binding prot 92.0 11 0.00037 37.6 21.9 133 78-223 484-630 (1158)
337 3sbq_A Nitrous-oxide reductase 91.0 2.6 8.8E-05 37.9 11.1 109 1-125 328-453 (638)
338 3ott_A Two-component system se 90.7 11 0.00038 35.4 19.9 137 65-216 146-296 (758)
339 3uc1_A DNA gyrase subunit A; D 90.2 7.2 0.00025 32.5 16.9 158 6-186 108-278 (327)
340 2be1_A Serine/threonine-protei 90.1 0.71 2.4E-05 38.8 6.7 110 8-143 11-136 (339)
341 3ott_A Two-component system se 89.2 15 0.0005 34.6 19.4 139 66-216 104-249 (758)
342 2wg3_C Hedgehog-interacting pr 88.1 13 0.00043 32.8 13.5 110 107-218 14-158 (463)
343 4gq2_M Nucleoporin NUP120; bet 85.9 12 0.0004 36.5 13.1 38 66-104 237-274 (950)
344 2uvk_A YJHT; unknown function, 85.8 14 0.00049 30.8 14.6 51 76-127 65-128 (357)
345 4asc_A Kelch repeat and BTB do 85.4 14 0.00048 30.2 18.3 105 75-189 44-176 (315)
346 3das_A Putative oxidoreductase 84.5 17 0.00059 30.5 23.5 111 108-218 203-327 (347)
347 2xzh_A Clathrin heavy chain 1; 83.1 19 0.00066 30.1 16.6 33 107-139 260-292 (365)
348 2wg3_C Hedgehog-interacting pr 82.2 17 0.00059 31.9 11.5 25 1-25 19-44 (463)
349 2g8s_A Glucose/sorbosone dehyd 82.1 22 0.00074 29.9 16.4 64 105-175 269-340 (353)
350 3no0_A DNA gyrase subunit A; D 80.9 21 0.0007 28.9 16.1 158 63-224 66-239 (276)
351 1bpo_A Protein (clathrin); cla 79.8 31 0.001 30.2 18.5 108 4-139 159-291 (494)
352 1xi4_A Clathrin heavy chain; a 78.7 32 0.0011 35.2 12.8 34 108-141 260-293 (1630)
353 4gq2_M Nucleoporin NUP120; bet 77.1 56 0.0019 31.8 15.6 35 108-142 237-271 (950)
354 4fhn_B Nucleoporin NUP120; pro 76.4 8 0.00027 38.5 8.4 38 66-104 239-276 (1139)
355 3uc1_A DNA gyrase subunit A; D 75.7 33 0.0011 28.5 19.0 161 63-225 93-275 (327)
356 3no0_A DNA gyrase subunit A; D 73.7 34 0.0012 27.6 16.8 154 6-186 79-245 (276)
357 3f7f_A Nucleoporin NUP120; nuc 72.8 22 0.00075 33.1 9.6 36 160-195 223-258 (729)
358 4a9v_A PHOX; hydrolase, beta-p 68.6 22 0.00076 32.1 8.4 61 159-219 476-551 (592)
359 4fhn_B Nucleoporin NUP120; pro 66.7 52 0.0018 32.8 11.6 36 160-195 239-276 (1139)
360 1suu_A DNA gyrase subunit A; t 64.5 58 0.002 26.7 17.1 110 7-138 114-232 (312)
361 1zi0_A DNA gyrase subunit A; b 63.1 61 0.0021 26.5 16.3 110 6-137 108-226 (307)
362 1wp5_A Topoisomerase IV; broke 62.7 65 0.0022 26.6 17.3 110 7-137 106-225 (323)
363 3s25_A Hypothetical 7-bladed b 61.6 65 0.0022 26.3 16.5 62 72-136 152-215 (302)
364 3f7f_A Nucleoporin NUP120; nuc 59.3 17 0.00059 33.8 6.1 30 76-105 230-259 (729)
365 1sqj_A OXG-RCBH, oligoxylogluc 58.5 1.3E+02 0.0043 28.6 13.6 61 64-125 14-83 (789)
366 3l6v_A GYRA, DNA gyrase subuni 56.2 92 0.0032 26.3 17.0 112 6-139 112-267 (370)
367 3zwu_A Alkaline phosphatase PH 54.1 39 0.0013 30.7 7.5 59 160-218 477-550 (592)
368 1suu_A DNA gyrase subunit A; t 52.3 97 0.0033 25.4 20.8 121 64-186 99-230 (312)
369 3b7f_A Glycosyl hydrolase, BNR 49.2 1.2E+02 0.0041 25.5 15.1 67 66-133 116-204 (394)
370 3qhy_B Beta-lactamase inhibito 45.5 1.2E+02 0.004 24.4 14.8 104 65-187 102-207 (282)
371 3q6k_A 43.2 kDa salivary prote 43.3 1.5E+02 0.0052 25.1 21.5 147 65-216 152-341 (381)
372 3l6v_A GYRA, DNA gyrase subuni 41.2 1.6E+02 0.0055 24.8 20.3 75 63-137 97-180 (370)
373 3qhy_B Beta-lactamase inhibito 39.4 1.5E+02 0.005 23.8 15.2 104 65-187 63-168 (282)
374 1zvt_A Topoisomerase IV subuni 39.1 1.4E+02 0.0049 23.6 12.3 142 79-225 4-159 (256)
375 1zvt_A Topoisomerase IV subuni 35.7 1.6E+02 0.0055 23.2 12.7 117 65-186 33-162 (256)
376 4a9v_A PHOX; hydrolase, beta-p 35.0 1.9E+02 0.0064 26.3 8.6 60 65-125 476-549 (592)
377 1zi0_A DNA gyrase subunit A; b 34.2 1.9E+02 0.0065 23.5 19.1 160 63-224 93-272 (307)
378 4gz8_A Semaphorin-3A; multi-do 31.6 1.8E+02 0.0063 26.9 8.3 55 78-132 430-495 (667)
379 1q47_A Semaphorin 3A; beta pro 30.8 1.2E+02 0.0042 26.8 6.9 67 66-132 405-487 (495)
380 1ukf_A Avirulence protein AVRP 30.5 86 0.0029 23.4 4.8 35 158-192 118-155 (188)
381 1olz_A Semaphorin 4D; developm 28.4 1.9E+02 0.0063 26.8 7.8 55 78-132 416-477 (663)
382 3zwu_A Alkaline phosphatase PH 26.8 2.8E+02 0.0097 25.2 8.5 36 89-124 511-548 (592)
383 3kci_A Probable E3 ubiquitin-p 25.4 3E+02 0.01 23.1 19.0 118 66-186 160-292 (389)
384 3nvq_A Semaphorin-7A; beta-pro 23.4 3.2E+02 0.011 24.8 8.1 56 78-133 381-445 (590)
385 3al9_A Plexin-A2; beta-propell 23.3 2.7E+02 0.0093 24.9 7.7 67 66-132 401-476 (539)
386 1wp5_A Topoisomerase IV; broke 22.1 3.3E+02 0.011 22.3 20.1 121 64-186 91-224 (323)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=242.32 Aligned_cols=190 Identities=22% Similarity=0.246 Sum_probs=161.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|||++|++|+.||+|++||+. ....+..+.+|...|.+++|++.+..+|
T Consensus 133 v~~spdg~~l~sgs~d~~i~iwd~~---------------------------~~~~~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKDICIKVWDLA---------------------------QQVVLSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEECSSCTTEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECC---------------------------CCcEEEEEcCcCCceEEEEecCCCCCce
Confidence 5799999999999999999999998 5677888899999999999988776789
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCC-CcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPG-EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
++|+.|++|++||+++++....+. +...+.+++|+|+ +.+|++|+.||.|++||+++ .+.+..+.+
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~----------~~~~~~~~~ 255 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS----------TSCVLSSAV 255 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC------------CCEEEEC
T ss_pred eeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC----------CcEEEEEcC
Confidence 999999999999999998887753 4557999999995 56889999999999999984 344558889
Q ss_pred cCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCe-EEeeecCccccccccCC
Q 045370 157 HNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSL-LSEVSNCQRKLKKDRMP 229 (350)
Q Consensus 157 ~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~~~~~~~~~~~~ 229 (350)
|...|++++|+|++ |++|+.|++|+|||+++++++ .+.+|.+.|++++|+|+++. |++++.|+ .+.+|.++
T Consensus 256 h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~-~v~~w~v~ 330 (344)
T 4gqb_B 256 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDH-QVVHHVVP 330 (344)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTS-CEEEEECC
T ss_pred CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCC-eEEEEECC
Confidence 99999999999986 889999999999999998866 46789999999999999875 55556554 44455543
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-32 Score=232.29 Aligned_cols=182 Identities=22% Similarity=0.358 Sum_probs=165.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||++ .......+..|...|.+++|+| ++.+|
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~---------------------------~~~~~~~~~~~~~~v~~~~~sp-dg~~l 179 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVE---------------------------SGKKEYSLDTRGKFILSIAYSP-DGKYL 179 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETT---------------------------TCSEEEEEECSSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcC---------------------------CCceeEEecCCCceEEEEEECC-CCCEE
Confidence 4799999999999999999999998 3555566778889999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|+.|++||+.+++.+..+. |..+|.+++|+|++.+|++|+.||.|++||++.. .....+.+|..
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~----------~~~~~~~~h~~ 249 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA----------NLAGTLSGHAS 249 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC----------CEEEEECCCSS
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc----------ceeEEEcCCCC
Confidence 999999999999999999888765 8889999999999999999999999999999853 33447789999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.|.+++|+|++ |++++.|+.|++||+++++++..+..|...|.+++|+|++++|++++.|+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 99999999998 99999999999999999999999999999999999999999999888765
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=234.93 Aligned_cols=194 Identities=22% Similarity=0.263 Sum_probs=153.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+||+ .|++|+.||+|+|||+.++.. .........+|.+.|.+++|++ ++.+|
T Consensus 88 ~~~s~d~-~l~~~s~dg~v~lWd~~~~~~-----------------------~~~~~~~~~~H~~~V~~v~~sp-dg~~l 142 (344)
T 4gqb_B 88 LTWVGER-GILVASDSGAVELWELDENET-----------------------LIVSKFCKYEHDDIVSTVSVLS-SGTQA 142 (344)
T ss_dssp EEEETTT-EEEEEETTSEEEEEEECTTSS-----------------------CEEEEEEEECCSSCEEEEEECT-TSSEE
T ss_pred EEEeCCC-eEEEEECCCEEEEEeccCCCc-----------------------eeEeeccccCCCCCEEEEEECC-CCCEE
Confidence 4799985 788999999999999983110 0111223468999999999966 78899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++|+.|++|++||+.+++++..+. |...|.+++|+|++. +|++++.||.|++||++++...... ....|.
T Consensus 143 ~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--------~~~~~~ 214 (344)
T 4gqb_B 143 VSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI--------GCSAPG 214 (344)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC--------C----C
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee--------ecceee
Confidence 999999999999999999988865 899999999999874 7899999999999999865432211 223466
Q ss_pred CceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccC-CeEEeeecCccccccccC
Q 045370 159 GSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQS-SLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 159 ~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~~~~~~~~~~~ 228 (350)
..+++++|+|++ |++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++++.|+ .+++|+.
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~-~i~vwd~ 287 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC-SLAVLDS 287 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS-CEEEECT
T ss_pred ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC-eEEEEEC
Confidence 679999999965 7899999999999999999999999999999999999998 5778777664 3344443
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.9e-32 Score=240.55 Aligned_cols=189 Identities=20% Similarity=0.290 Sum_probs=167.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++|++|+.||+|++||+. ....+..+.+|...|.+++|+| ++.++
T Consensus 156 v~~~~~~~~l~sgs~D~~i~iwd~~---------------------------~~~~~~~~~~h~~~V~~v~~~p-~~~~l 207 (410)
T 1vyh_C 156 ISFDHSGKLLASCSADMTIKLWDFQ---------------------------GFECIRTMHGHDHNVSSVSIMP-NGDHI 207 (410)
T ss_dssp EEECTTSSEEEEEETTSCCCEEETT---------------------------SSCEEECCCCCSSCEEEEEECS-SSSEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC---------------------------CCceeEEEcCCCCCEEEEEEeC-CCCEE
Confidence 5799999999999999999999998 4566777889999999999976 67889
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|++|++||+.++.++..+ .|...|.++.|+|++.+|++|+.||.|++||+++. .....+.+|..
T Consensus 208 ~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~----------~~~~~~~~h~~ 277 (410)
T 1vyh_C 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK----------ECKAELREHRH 277 (410)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC----------CEEEEECCCSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC----------ceeeEecCCCc
Confidence 99999999999999999988875 48889999999999999999999999999999853 33446788999
Q ss_pred ceEEEEecCC--------------------e--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeee
Q 045370 160 SITALAFSAS--------------------H--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 160 ~i~~~~~~~~--------------------~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 217 (350)
.|.+++|+|+ + |++|+.|+.|++||++++.++..+.+|...|.+++|+|++++|++++
T Consensus 278 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe
Confidence 9999999985 4 99999999999999999999999999999999999999999999887
Q ss_pred cCccccccccC
Q 045370 218 NCQRKLKKDRM 228 (350)
Q Consensus 218 ~~~~~~~~~~~ 228 (350)
.|+ .+++|+.
T Consensus 358 ~D~-~i~vwd~ 367 (410)
T 1vyh_C 358 DDK-TLRVWDY 367 (410)
T ss_dssp TTT-EEEEECC
T ss_pred CCC-eEEEEEC
Confidence 664 3444444
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.3e-32 Score=229.67 Aligned_cols=227 Identities=15% Similarity=0.164 Sum_probs=175.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++|++|+.||+|++||+. ....+..+..|..+|.++.|++ ++.+|
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~---------------------------~~~~~~~~~~~~~~v~~~~~~~-~~~~l 70 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYE---------------------------TQVEVRSIQVTETPVRAGKFIA-RKNWI 70 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETT---------------------------TTEEEEEEECCSSCEEEEEEEG-GGTEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECC---------------------------CCceeEEeeccCCcEEEEEEeC-CCCEE
Confidence 5899999999999999999999998 4566777889999999999976 67899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|++|++||+.+++.+..+. |...|.+++|+|++.+|++|+.||.|++||++.. ......+.+|..
T Consensus 71 ~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~---------~~~~~~~~~h~~ 141 (304)
T 2ynn_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN---------WALEQTFEGHEH 141 (304)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT---------TEEEEEECCCCS
T ss_pred EEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC---------cchhhhhcccCC
Confidence 999999999999999999888764 8899999999999999999999999999999853 122346788999
Q ss_pred ceEEEEecCC-e--EEEEeCCCcEEEEECCCceEEEEec-cCCCceeEEEEEc--cCCeEEeeecCccccccccCCcc--
Q 045370 160 SITALAFSAS-H--LISASEDKTVCLWDVTRRVSIRRFN-HKKGVVTNLVVIR--QSSLLSEVSNCQRKLKKDRMPSL-- 231 (350)
Q Consensus 160 ~i~~~~~~~~-~--l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~-- 231 (350)
.|.+++|+|. + |++|+.|+.|++||++++.....+. .|...+..+.|+| ++.+|++++.|+ .+++|++...
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~-~i~iWd~~~~~~ 220 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-TIKIWDYQTKSC 220 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS-EEEEEETTTTEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC-eEEEEeCCCCcc
Confidence 9999999994 4 9999999999999998877665554 4567889999987 667888777764 3334433221
Q ss_pred -------ccCCCCccccccceEEeeccccCCCCcccccccccch
Q 045370 232 -------EKYPQLNSLSMEMVILLQSCFFNKDDQCSINIRRTKS 268 (350)
Q Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 268 (350)
...+....++++...++ .+..++.+.+|...++.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~---s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIII---SGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEE---EEETTSCEEEEETTTCC
T ss_pred ceeeCCCCCCEEEEEECCCCCEEE---EEcCCCeEEEEECCCCc
Confidence 11222233344444333 23346666666555444
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.3e-32 Score=231.32 Aligned_cols=189 Identities=19% Similarity=0.213 Sum_probs=166.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++.++++|+.|++|++||+. ....+..+..|...+.+++|+| ++.+|
T Consensus 86 ~~~~~~~~~l~s~s~D~~i~lWd~~---------------------------~~~~~~~~~~~~~~~~~~~~sp-dg~~l 137 (321)
T 3ow8_A 86 VDISHTLPIAASSSLDAHIRLWDLE---------------------------NGKQIKSIDAGPVDAWTLAFSP-DSQYL 137 (321)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETT---------------------------TTEEEEEEECCTTCCCCEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECC---------------------------CCCEEEEEeCCCccEEEEEECC-CCCEE
Confidence 4789999999999999999999998 4566677778889999999965 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|+.|++||+.+++....+. +...+.+++|+|++++|++|+.||.|++||++++ +.+..+.+|..
T Consensus 138 ~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~----------~~~~~~~~h~~ 207 (321)
T 3ow8_A 138 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG----------KLLHTLEGHAM 207 (321)
T ss_dssp EEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------EEEEEECCCSS
T ss_pred EEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC----------cEEEEEcccCC
Confidence 999999999999999998877754 6778999999999999999999999999999854 34447788999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+|++++|+|++ |++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+ .+++|++
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~-~v~iwd~ 277 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK-SVKVWDV 277 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEET
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCC-cEEEEeC
Confidence 99999999998 99999999999999999999999999999999999999999999888764 3344443
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-32 Score=240.22 Aligned_cols=182 Identities=20% Similarity=0.245 Sum_probs=164.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++.+|++|+.||+|+|||+. .......+.+|.+.|.+++|++ ++.+|
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~---------------------------~~~~~~~l~~h~~~V~~v~~~~-~~~~l 165 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYE---------------------------TGDFERTLKGHTDSVQDISFDH-SGKLL 165 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETT---------------------------TCCCCEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECC---------------------------CCcEEEEEeccCCcEEEEEEcC-CCCEE
Confidence 5799999999999999999999998 4666778889999999999965 67899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|++|++||+.+++++..+ .|...|.+++|+|++.+|++|+.|+.|++||++++ ..+..+.+|..
T Consensus 166 ~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~----------~~~~~~~~h~~ 235 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG----------YCVKTFTGHRE 235 (410)
T ss_dssp EEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------CEEEEEECCSS
T ss_pred EEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----------cEEEEEeCCCc
Confidence 99999999999999998888775 58889999999999999999999999999999853 34457889999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEcc--------------------CCeEEeee
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQ--------------------SSLLSEVS 217 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~~~~ 217 (350)
.|.++.++|++ +++|+.|+.|++||+++++....+..|...|.+++|+|+ +.+|++++
T Consensus 236 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 99999999998 999999999999999999999999999999999999996 56788777
Q ss_pred cCc
Q 045370 218 NCQ 220 (350)
Q Consensus 218 ~~~ 220 (350)
.|+
T Consensus 316 ~D~ 318 (410)
T 1vyh_C 316 RDK 318 (410)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=230.43 Aligned_cols=188 Identities=22% Similarity=0.234 Sum_probs=156.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++||+|+.|++|+|||+.... .........+|...|.+++|+| ++.+|
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~------------------------~~~~~~~~~~h~~~v~~~~~sp-~g~~l 76 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDS------------------------WICKSVLSEGHQRTVRKVAWSP-CGNYL 76 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTE------------------------EEEEEEECSSCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCc------------------------ceeeeeeccccCCcEEEEEECC-CCCEE
Confidence 5899999999999999999999987210 0011122368999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCc--eEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 81 VSSSLDATCKVWDLGSGI--LIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
++|+.|++|++||+..+. .+..+ .|...|.+++|+|++++|++|+.|+.|++||++.... ......+.+|
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-------~~~~~~~~~h 149 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-------YECVSVLNSH 149 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-------EEEEEEECCC
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-------eEEEEEecCc
Confidence 999999999999998774 34444 4889999999999999999999999999999975321 1233467789
Q ss_pred CCceEEEEecCCe--EEEEeCCCcEEEEECCCce--EEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 158 NGSITALAFSASH--LISASEDKTVCLWDVTRRV--SIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 158 ~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
...|.+++|+|++ |++|+.|+.|++||.+++. +...+.+|...|.+++|+|++++|++++.|+
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 9999999999998 9999999999999998875 4567889999999999999999999888774
No 9
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-31 Score=227.30 Aligned_cols=187 Identities=17% Similarity=0.236 Sum_probs=156.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-CCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-GTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~ 79 (350)
++|+|+|++||+|+.|++|+|||+... .......+.+|.++|.+++|.++ ++.+
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~-------------------------~~~~~~~l~gH~~~V~~v~~s~~~~g~~ 69 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGE-------------------------THKLIDTLTGHEGPVWRVDWAHPKFGTI 69 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSS-------------------------CBCCCEEECCCSSCEEEEEECCGGGCSE
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCC-------------------------CcEEEEEEccccCCeEEEEecCCCcCCE
Confidence 579999999999999999999998620 13456778899999999999764 4789
Q ss_pred EEEEeCCCcEEEEeCCCCc--eEEEE-ecCCceeEEEEcCC--CcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 80 FVSSSLDATCKVWDLGSGI--LIQTQ-VYPQAVTAIAFHPG--EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
|++|+.|++|++||+.++. .+..+ .|...|.+++|+|+ +.+|++++.||.|++||++.... .....+
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--------~~~~~~ 141 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--------TSPIII 141 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--------BCCEEE
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--------eeeeee
Confidence 9999999999999999874 33333 48889999999997 88999999999999999985321 112366
Q ss_pred eccCCceEEEEecCC-------------e--EEEEeCCCcEEEEECCCce----EEEEeccCCCceeEEEEEccC---Ce
Q 045370 155 KGHNGSITALAFSAS-------------H--LISASEDKTVCLWDVTRRV----SIRRFNHKKGVVTNLVVIRQS---SL 212 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~-------------~--l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~~---~~ 212 (350)
.+|...|.+++|+|+ + |++|+.|+.|++||++++. ....+.+|...|.+++|+|++ .+
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~ 221 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence 789999999999996 2 9999999999999998765 667888999999999999995 78
Q ss_pred EEeeecCc
Q 045370 213 LSEVSNCQ 220 (350)
Q Consensus 213 l~~~~~~~ 220 (350)
|++++.|+
T Consensus 222 las~s~D~ 229 (297)
T 2pm7_B 222 MASVSQDR 229 (297)
T ss_dssp EEEEETTS
T ss_pred EEEEECCC
Confidence 88777764
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-31 Score=232.04 Aligned_cols=191 Identities=24% Similarity=0.326 Sum_probs=163.5
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++|++|+.||+|++||+. ....+..+.+|...|.+++|++.+..++
T Consensus 145 v~~spdg~~l~sgs~dg~v~iwd~~---------------------------~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDFSVKVWDLS---------------------------QKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECC---------------------------CCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 5799999999999999999999998 4677778889999999999987666789
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCC-CcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPG-EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
++++.|++|++||+++++....+. +...+.+++|+|+ +.+|++|+.|+.|++||++++ .....+.+
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~----------~~~~~~~~ 267 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP----------DSAQTSAV 267 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG----------GGCEEECC
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC----------cEeEEEec
Confidence 999999999999999988766543 5667999999997 568899999999999999854 34457889
Q ss_pred cCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEc-cCCeEEeeecCccccccccCCc
Q 045370 157 HNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR-QSSLLSEVSNCQRKLKKDRMPS 230 (350)
Q Consensus 157 ~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~~~~~~~~~~~~~ 230 (350)
|...|++++|+|++ |++|+.|++|+|||+++++++..+ +|.+.|++|+|+| ++.+|++++.|+. +.+|+++.
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~-v~iW~~~~ 343 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHK-VLHHHLPS 343 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSC-EEEEECC-
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCe-EEEEECCC
Confidence 99999999999986 889999999999999999988766 5999999999999 7889998887653 34555443
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.4e-31 Score=225.43 Aligned_cols=181 Identities=20% Similarity=0.276 Sum_probs=158.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.|++|++||+. .......+.+|...|.+++|++ ++.++
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~---------------------------~~~~~~~~~~h~~~v~~~~~~~-~~~~l 122 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVA---------------------------TGETYQRFVGHKSDVMSVDIDK-KASMI 122 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT---------------------------TTEEEEEEECCSSCEEEEEECT-TSCEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECC---------------------------CCCeeEEEccCCCcEEEEEEcC-CCCEE
Confidence 4799999999999999999999998 4666778889999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCC------CcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPG------EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
++|+.|++|++||++.........|...+.++.|.|. +..+++++.|+.|++||++... ....+
T Consensus 123 ~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~----------~~~~~ 192 (319)
T 3frx_A 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ----------IEADF 192 (319)
T ss_dssp EEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE----------EEEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch----------hheee
Confidence 9999999999999986554444678899999999985 4489999999999999998533 33467
Q ss_pred eccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 155 KGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.+|...|++++|+|++ |++|+.||.|++||+++++.+..+.. ...|.+++|+|++.+|++++.++
T Consensus 193 ~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEETTE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCCC
Confidence 7899999999999998 99999999999999999999999885 47899999999999999877664
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-30 Score=221.71 Aligned_cols=190 Identities=20% Similarity=0.243 Sum_probs=161.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.|++|++||+. ....+..+.+|.+.|.+++|+| ++.++
T Consensus 61 ~~~~~~~~~l~s~s~d~~i~vwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~~-~~~~l 112 (304)
T 2ynn_A 61 GKFIARKNWIIVGSDDFRIRVFNYN---------------------------TGEKVVDFEAHPDYIRSIAVHP-TKPYV 112 (304)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCSSCEEEEEECS-SSSEE
T ss_pred EEEeCCCCEEEEECCCCEEEEEECC---------------------------CCcEEEEEeCCCCcEEEEEEcC-CCCEE
Confidence 4689999999999999999999998 4667778889999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCCceE-EEE-ecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 81 VSSSLDATCKVWDLGSGILI-QTQ-VYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~-~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
++|+.|++|++||+.++... ..+ .|...|.+++|+| ++.+|++|+.|+.|++||++.... ......+|
T Consensus 113 ~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~---------~~~~~~~~ 183 (304)
T 2ynn_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---------NFTLTTGQ 183 (304)
T ss_dssp EEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC---------SEEEECCC
T ss_pred EEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc---------cceeccCC
Confidence 99999999999999987443 333 5888999999999 678999999999999999975321 11233456
Q ss_pred CCceEEEEecC--Ce--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 158 NGSITALAFSA--SH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 158 ~~~i~~~~~~~--~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
...+..+.|+| ++ |++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.|+. +++|+.
T Consensus 184 ~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-i~iWd~ 257 (304)
T 2ynn_A 184 ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNS 257 (304)
T ss_dssp TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEET
T ss_pred cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-EEEEEC
Confidence 68899999987 44 999999999999999999999999999999999999999999998887743 334433
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=1.3e-30 Score=225.16 Aligned_cols=181 Identities=18% Similarity=0.307 Sum_probs=159.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|||++|++|+.||+|++||+. .......+..|...|.+++|+| ++.++
T Consensus 61 ~~~s~d~~~l~s~s~Dg~v~iWd~~---------------------------~~~~~~~~~~~~~~v~~~~~s~-~~~~l 112 (340)
T 1got_B 61 MHWGTDSRLLLSASQDGKLIIWDSY---------------------------TTNKVHAIPLRSSWVMTCAYAP-SGNYV 112 (340)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETT---------------------------TCCEEEEEECSSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECC---------------------------CCCcceEeecCCccEEEEEECC-CCCEE
Confidence 5799999999999999999999998 4566677788999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCc----eEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 81 VSSSLDATCKVWDLGSGI----LIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~----~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++|+.|+.|++|++.++. .... ..|...|.++.|++++. +++++.|+.|++||+.++ .....+.
T Consensus 113 ~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~----------~~~~~~~ 181 (340)
T 1got_B 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG----------QQTTTFT 181 (340)
T ss_dssp EEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT----------EEEEEEC
T ss_pred EEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC----------cEEEEEc
Confidence 999999999999998753 2233 35888999999998775 888999999999999853 3444778
Q ss_pred ccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 156 GHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+|...|.+++|+|++ +++|+.|+.|++||++++..+..+.+|...|.+++|+|++++|++++.|+
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC
Confidence 999999999999998 99999999999999999999999999999999999999999999888764
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=6e-31 Score=230.64 Aligned_cols=212 Identities=19% Similarity=0.308 Sum_probs=166.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCcccccccccccccc----------------cccc--ccEEEeecc----cccccee
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHS----------------DQLD--QRLIEMELR----SLRSLLH 58 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~----------------~~~~--~~~~~~~~~----~~~~~~~ 58 (350)
++|+|+|++|+||+.||+|+|||+.+.........+.. ...+ ..+|.+... .......
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 57999999999999999999999876443221111110 0111 233333211 1122345
Q ss_pred eeccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE------ecCCceeEEEEcC-CCcEEEEEccCCeEE
Q 045370 59 YSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ------VYPQAVTAIAFHP-GEQLLFAGSIDGRIF 131 (350)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~ 131 (350)
.+.+|.+.|.++.|.+.++..|++|+.|++|++||+.+++.+..+ .|...|.+++|++ ++++|++|+.||.|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 678999999999998877778999999999999999999988765 3677899999987 889999999999999
Q ss_pred EEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCC-------Ccee
Q 045370 132 VSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKK-------GVVT 202 (350)
Q Consensus 132 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~-------~~v~ 202 (350)
+||++. .......+.+|...|++++|+|++ |++|+.||+|++||+++++.+..+..+. ..|+
T Consensus 232 ~wd~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 232 LWDLRI---------TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp EEETTT---------TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCS
T ss_pred EEECCC---------CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceE
Confidence 999973 234455788999999999999998 9999999999999999999988876432 2489
Q ss_pred EEEEEccCCeEEeeecCcc
Q 045370 203 NLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 203 ~l~~~~~~~~l~~~~~~~~ 221 (350)
+++|+|+|++|++++.++.
T Consensus 303 ~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EEEECSSSSEEEEECTTSC
T ss_pred EEEECCCCCEEEEEECCCC
Confidence 9999999999998877653
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.98 E-value=1.5e-30 Score=225.84 Aligned_cols=184 Identities=21% Similarity=0.280 Sum_probs=162.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-CCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-GTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~ 79 (350)
++|+|++.+|++|+.||+|++||++ ....+..+.+|...|.++.+.+. ++.+
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVE---------------------------SGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCC---------------------------CCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 4689999999999999999999998 46677788899999999999764 4589
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee--c
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK--G 156 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--~ 156 (350)
|++|+.||+|++||+++++++..+. |...|.+++|+|++.+|++|+.|+.|++||++..... ..+. .
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~----------~~~~~~~ 282 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV----------AIYSKES 282 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE----------EEECCTT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE----------EEEcCCC
Confidence 9999999999999999999888764 8889999999999999999999999999999854321 1222 2
Q ss_pred cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 157 HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 157 ~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
+...+.+++|+|++ |++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.|+.
T Consensus 283 ~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 283 IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 34578999999998 999999999999999999999999999999999999999999999888754
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=1.7e-30 Score=224.36 Aligned_cols=191 Identities=17% Similarity=0.250 Sum_probs=160.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.|+.|++||+.+.. ........+.+|...|.++.|.+. + .+
T Consensus 103 ~~~s~~~~~l~s~~~d~~v~iw~~~~~~-----------------------~~~~~~~~~~~h~~~v~~~~~~~~-~-~l 157 (340)
T 1got_B 103 CAYAPSGNYVACGGLDNICSIYNLKTRE-----------------------GNVRVSRELAGHTGYLSCCRFLDD-N-QI 157 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTCS-----------------------BSCEEEEEEECCSSCEEEEEEEET-T-EE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECccCC-----------------------CcceeEEEecCCCccEEEEEECCC-C-cE
Confidence 4799999999999999999999987310 012344567789999999999763 3 48
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++++.|++|++||+.+++.+..+. |...|.+++|+|++.++++|+.||.|++||++.+ .....+.+|..
T Consensus 158 ~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~----------~~~~~~~~h~~ 227 (340)
T 1got_B 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG----------MCRQTFTGHES 227 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC----------SEEEEECCCSS
T ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC----------eeEEEEcCCcC
Confidence 999999999999999999888764 8889999999999999999999999999999853 34447789999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEecc--CCCceeEEEEEccCCeEEeeecCcccccccc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH--KKGVVTNLVVIRQSSLLSEVSNCQRKLKKDR 227 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~ 227 (350)
.|++++|+|++ |++|+.||.|++||+++++.+..+.. +...|.+++|+|++++|++++.++. +.+|+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd 298 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWD 298 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEE
Confidence 99999999998 99999999999999999988877753 3347999999999999998887753 33443
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=2e-30 Score=228.33 Aligned_cols=190 Identities=24% Similarity=0.377 Sum_probs=160.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|||++|++|+.||+|++||+. .......+.+|...|.+++|++ ++.+|
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~p-~~~~l 180 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIE---------------------------NRKIVMILQGHEQDIYSLDYFP-SGDKL 180 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECC---------------------------CCcEEEEEccCCCCEEEEEEcC-CCCEE
Confidence 4799999999999999999999998 4566777889999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|++|++||+.+++....+.+...+.+++|+| ++.+|++|+.||.|++||++++....... .......+|..
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~---~~~~~~~~h~~ 257 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD---SENESGTGHKD 257 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSS
T ss_pred EEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeec---ccccCCCCCCC
Confidence 999999999999999999988888889999999999 89999999999999999998654332110 01112357999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCc------------eEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRR------------VSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~------------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
.|++++|+|++ |++|+.|+.|++||+++. .+...+.+|...|.+++|+|++.+|++++.|+.
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 99999999998 999999999999999763 345667789999999999999999998887754
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=4.7e-30 Score=222.74 Aligned_cols=182 Identities=18% Similarity=0.243 Sum_probs=159.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+||+++|+||+.||+|+|||.. .......+..|...|.+++|+| ++.++
T Consensus 70 ~~~s~d~~~l~s~s~Dg~v~vWd~~---------------------------~~~~~~~~~~~~~~v~~~~~sp-~g~~l 121 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDGKVIVWDSF---------------------------TTNKEHAVTMPCTWVMACAYAP-SGCAI 121 (354)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT---------------------------TCCEEEEEECSSSCCCEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECC---------------------------CCCcceEEecCCCCEEEEEECC-CCCEE
Confidence 5799999999999999999999987 3455566677889999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCc-------eEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccccccee
Q 045370 81 VSSSLDATCKVWDLGSGI-------LIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
++|+.|+.+++|++.... ......|...|.+++|+|++..|++++.|+.|++||++++ ..+..
T Consensus 122 asg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----------~~~~~ 191 (354)
T 2pbi_B 122 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG----------QLLQS 191 (354)
T ss_dssp EEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------CEEEE
T ss_pred EEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC----------eEEEE
Confidence 999999999999986531 2223468899999999999999999999999999999853 34457
Q ss_pred eeccCCceEEEEecCC--e--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 154 LKGHNGSITALAFSAS--H--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 154 ~~~~~~~i~~~~~~~~--~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+.+|...|.+++++|+ + |++|+.||.|++||+++++++..+..|...|.+++|+|++.+|++++.|+
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence 8899999999999874 3 99999999999999999999999999999999999999999999888764
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.5e-29 Score=215.72 Aligned_cols=182 Identities=23% Similarity=0.323 Sum_probs=162.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++|++. .......+.+|...|.+++|++ ++.+|
T Consensus 29 ~~~s~~~~~l~s~~~dg~i~iw~~~---------------------------~~~~~~~~~~h~~~v~~~~~~~-~~~~l 80 (312)
T 4ery_A 29 VKFSPNGEWLASSSADKLIKIWGAY---------------------------DGKFEKTISGHKLGISDVAWSS-DSNLL 80 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TCCEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEeeCCCeEEEEeCC---------------------------CcccchhhccCCCceEEEEEcC-CCCEE
Confidence 5799999999999999999999997 3556667789999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|+.|++||+.+++.+..+. |...|.+++|+|++++|++|+.||.|++||++++ .....+..|..
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------~~~~~~~~~~~ 150 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG----------KCLKTLPAHSD 150 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----------CEEEEECCCSS
T ss_pred EEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----------EEEEEecCCCC
Confidence 999999999999999999888764 8889999999999999999999999999999853 33447778999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec-cCCCceeEEEEEccCCeEEeeecCc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN-HKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+|.+++|+|++ +++++.||.|++||+++++.+..+. .+..++..++|+|++++|++++.++
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 99999999998 9999999999999999998887764 4567899999999999999888765
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.9e-30 Score=218.20 Aligned_cols=186 Identities=21% Similarity=0.276 Sum_probs=161.7
Q ss_pred CeecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|++ ++|+||+.|++|++|++.... ......+..+.+|...|.+++|++ ++.+
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~----------------------~~~~~~~~~~~~h~~~v~~~~~s~-dg~~ 79 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDD----------------------QKFGVPVRSFKGHSHIVQDCTLTA-DGAY 79 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEET----------------------TEEEEEEEEEECCSSCEEEEEECT-TSSE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCC----------------------ccccccceEEeCCcccEEEEEECC-CCCE
Confidence 4789865 899999999999999987210 001334567789999999999965 7889
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++|+.|++|++||+.+++.+..+ .|...|.+++|+|++.+|++|+.|+.|++||++. .....+.+|.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-----------~~~~~~~~h~ 148 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-----------QCLATLLGHN 148 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-----------CEEEEECCCS
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------CeEEEEeccC
Confidence 999999999999999999988775 5899999999999999999999999999999873 2334677899
Q ss_pred CceEEEEecCC------e--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 159 GSITALAFSAS------H--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 159 ~~i~~~~~~~~------~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..|.++.++|. + +++++.|+.|++||+++++....+.+|..+|.+++|+|++++|++++.|+
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99999999984 2 99999999999999999999999999999999999999999999888774
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=3.3e-31 Score=226.44 Aligned_cols=188 Identities=15% Similarity=0.154 Sum_probs=155.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-CCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-GTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~ 79 (350)
++|+|+|++||+|+.|++|+|||+.+. ....+..+.+|.+.|.+++|.++ ++.+
T Consensus 19 v~~s~~g~~lasgs~D~~v~lwd~~~~-------------------------~~~~~~~l~gH~~~V~~v~~~~~~~~~~ 73 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDRSVKIFDVRNG-------------------------GQILIADLRGHEGPVWQVAWAHPMYGNI 73 (316)
T ss_dssp EEECGGGCEEEEEETTTEEEEEEEETT-------------------------EEEEEEEEECCSSCEEEEEECCGGGSSC
T ss_pred eeEcCCCCEEEEEeCCCeEEEEEecCC-------------------------CcEEEEEEcCCCccEEEEEeCCCCCCCE
Confidence 579999999999999999999998721 11245567899999999999764 4788
Q ss_pred EEEEeCCCcEEEEeCCCCc--eEEEE-ecCCceeEEEEcCC--CcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 80 FVSSSLDATCKVWDLGSGI--LIQTQ-VYPQAVTAIAFHPG--EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
|++|+.|++|++||+.++. ....+ .|...|.+++|+|+ +.+|++|+.||.|++||++..... .....+
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~-------~~~~~~ 146 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW-------EVKKIN 146 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE-------EECCBT
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc-------ceeeee
Confidence 9999999999999999874 33333 48889999999997 789999999999999998853210 112245
Q ss_pred eccCCceEEEEecCC-----------------e--EEEEeCCCcEEEEECCCc---eEEEEeccCCCceeEEEEEccC--
Q 045370 155 KGHNGSITALAFSAS-----------------H--LISASEDKTVCLWDVTRR---VSIRRFNHKKGVVTNLVVIRQS-- 210 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~-----------------~--l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~~-- 210 (350)
.+|...|.+++|+|+ + |++|+.|+.|++||++.. +.+..+.+|...|.+++|+|++
T Consensus 147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 226 (316)
T 3bg1_A 147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL 226 (316)
T ss_dssp TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSC
T ss_pred ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCC
Confidence 678899999999986 2 999999999999999764 5777888999999999999987
Q ss_pred --CeEEeeecCc
Q 045370 211 --SLLSEVSNCQ 220 (350)
Q Consensus 211 --~~l~~~~~~~ 220 (350)
.+|++++.|+
T Consensus 227 ~~~~las~s~D~ 238 (316)
T 3bg1_A 227 PTSTIASCSQDG 238 (316)
T ss_dssp SCCEEEEEETTC
T ss_pred CCceEEEEcCCC
Confidence 7888887775
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.2e-30 Score=232.80 Aligned_cols=185 Identities=18% Similarity=0.234 Sum_probs=153.5
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+| ++++||+|+.||+|+|||+.+. .......+.+|.+.|.+++|+|.++.+
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~-------------------------~~~~~~~~~gH~~~V~~l~f~p~~~~~ 179 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIK-------------------------DKPTFIKGIGAGGSITGLKFNPLNTNQ 179 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCC-------------------------SCCEEECCCSSSCCCCEEEECSSCTTE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCC-------------------------CceeEEEccCCCCCEEEEEEeCCCCCE
Confidence 58999 5679999999999999999731 122344567899999999998878889
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
|++|+.||+|++||++++....... +...+.+++|+|++.+|++|+.||.|++||++. ..+..+.+
T Consensus 180 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-----------~~~~~~~~ 248 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-----------KELWNLRM 248 (435)
T ss_dssp EEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-----------CBCCCSBC
T ss_pred EEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-----------ceeEEEec
Confidence 9999999999999998765544433 334578999999999999999999999999873 23346778
Q ss_pred cCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEe---ccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 157 HNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRF---NHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 157 ~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
|...|++++|+|++ +++|+.|+.|++||+++.+....+ .+|..+|++++|+|++.+|++++.|+.
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 99999999999987 889999999999999986654433 468899999999999999998887753
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=219.68 Aligned_cols=186 Identities=20% Similarity=0.276 Sum_probs=154.5
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.|++|++||+... .......+.+|...|.+++|+| ++.+|
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~-------------------------~~~~~~~~~~h~~~v~~v~~sp-~~~~l 120 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQD-------------------------DFECVTTLEGHENEVKSVAWAP-SGNLL 120 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC--------------------------EEEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCC-------------------------CeEEEEEccCCCCCceEEEEeC-CCCEE
Confidence 579999999999999999999998721 1234567789999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCce---EEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 81 VSSSLDATCKVWDLGSGIL---IQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
++|+.|++|++||+.++.. +..+ .|...|.+++|+|++.+|++++.|+.|++||.+.... .....+.+
T Consensus 121 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~--------~~~~~~~~ 192 (345)
T 3fm0_A 121 ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW--------VCCATLEG 192 (345)
T ss_dssp EEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE--------EEEEEECC
T ss_pred EEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE--------EEEEEecC
Confidence 9999999999999987643 2333 4788999999999999999999999999999875321 12346788
Q ss_pred cCCceEEEEecCCe--EEEEeCCCcEEEEECCC---------------ceEEEEecc-CCCceeEEEEEccCCeEEeeec
Q 045370 157 HNGSITALAFSASH--LISASEDKTVCLWDVTR---------------RVSIRRFNH-KKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 157 ~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~---------------~~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
|...|++++|+|++ |++|+.|++|++||... ..++..+.+ |...|.+++|+|++..|++++.
T Consensus 193 h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 193 HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC
Confidence 99999999999998 99999999999999632 234555554 8889999999999999998887
Q ss_pred Cc
Q 045370 219 CQ 220 (350)
Q Consensus 219 ~~ 220 (350)
|+
T Consensus 273 d~ 274 (345)
T 3fm0_A 273 DD 274 (345)
T ss_dssp TS
T ss_pred CC
Confidence 75
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.6e-29 Score=218.53 Aligned_cols=179 Identities=16% Similarity=0.280 Sum_probs=148.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++.+|++|+.|++|++||+. .......+.+|...|.+++|+| ++.+|
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~---------------------------~~~~~~~~~~h~~~v~~v~~sp-~~~~l 133 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLR---------------------------TGTTYKRFVGHQSEVYSVAFSP-DNRQI 133 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETT---------------------------SSCEEEEEECCCSCEEEEEECS-STTEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECC---------------------------CCcEEEEEcCCCCcEEEEEECC-CCCEE
Confidence 4799999999999999999999998 4566777889999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE---ecCCceeEEEEcCCC----------cEEEEEccCCeEEEEeCCccccccccccc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ---VYPQAVTAIAFHPGE----------QLLFAGSIDGRIFVSPLKFLLLEDHFIVG 147 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 147 (350)
++|+.|++|++||+......... .|...|.+++|+|++ .+|++++.||.|++||..
T Consensus 134 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----------- 202 (343)
T 2xzm_R 134 LSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----------- 202 (343)
T ss_dssp EEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-----------
T ss_pred EEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-----------
Confidence 99999999999999844333322 477889999999987 799999999999999954
Q ss_pred cccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCC-ceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTR-RVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
......+.+|...|++++|+|++ |++|+.||.|++||+.+ ......+. +...|.+++|+|+++++++++.+
T Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 203 FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESS
T ss_pred CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCC
Confidence 22334677899999999999998 99999999999999954 44444443 45679999999999988865443
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=1.5e-29 Score=219.80 Aligned_cols=218 Identities=19% Similarity=0.199 Sum_probs=161.2
Q ss_pred CeecCCCCEEEEEeC------CCcEEEEeCccccccccccc---ccc----------------ccccccEEEeeccccc-
Q 045370 1 MVFSDDGFLLISGSD------DGMICVWSMTRLLKQTSELM---HHS----------------DQLDQRLIEMELRSLR- 54 (350)
Q Consensus 1 i~~s~dg~~l~sg~~------dg~i~vwd~~~~~~~~~~~~---~~~----------------~~~~~~~~~~~~~~~~- 54 (350)
|+|||||++||+|+. |+.|++|+..+......... .+. ...++.+..++.....
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~ 127 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES 127 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-------
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce
Confidence 589999999999997 78899998765432211110 010 0112222222211111
Q ss_pred --cceeeeccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCc-EEEEEccCCeE
Q 045370 55 --SLLHYSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQ-LLFAGSIDGRI 130 (350)
Q Consensus 55 --~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i 130 (350)
.......+|...|.+++|+| ++.+|++|+.|++|++||+.+++.+..+. |...|.+++|+|++. ++++++.||.|
T Consensus 128 ~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v 206 (357)
T 4g56_B 128 LLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI 206 (357)
T ss_dssp -CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred eEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence 11223458999999999966 77899999999999999999999888865 889999999999875 78899999999
Q ss_pred EEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEE
Q 045370 131 FVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207 (350)
Q Consensus 131 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~ 207 (350)
++||++++..... .....|...+++++|+|++ |++|+.|+.|++||+++++.+..+.+|...|++++|+
T Consensus 207 ~~wd~~~~~~~~~--------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~s 278 (357)
T 4g56_B 207 LLWDTRKPKPATR--------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYS 278 (357)
T ss_dssp EECCTTSSSCBCB--------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEEC
T ss_pred EEEECCCCceeee--------eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEc
Confidence 9999986543221 1334577889999999975 8899999999999999999999999999999999999
Q ss_pred ccC-CeEEeeecCccccccccC
Q 045370 208 RQS-SLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 208 ~~~-~~l~~~~~~~~~~~~~~~ 228 (350)
|++ ++|++++.|+ .+++|+.
T Consensus 279 p~~~~~lasgs~D~-~i~iwd~ 299 (357)
T 4g56_B 279 YHSSPFLASISEDC-TVAVLDA 299 (357)
T ss_dssp SSSSCCEEEEETTS-CEEEECT
T ss_pred CCCCCEEEEEeCCC-EEEEEEC
Confidence 997 5777777654 3344443
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=7.2e-29 Score=230.57 Aligned_cols=214 Identities=17% Similarity=0.160 Sum_probs=163.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccc-ccccccccc-------ccc--------------cEEEeecccccccee
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQT-SELMHHSDQ-------LDQ--------------RLIEMELRSLRSLLH 58 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~-~~~~~~~~~-------~~~--------------~~~~~~~~~~~~~~~ 58 (350)
++|||||++||+|+.||+|+|||+.+..... .....+..+ .++ .++.++ ......
T Consensus 65 ~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd---~~~~~~ 141 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD---TGTSNG 141 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT---TCCBCB
T ss_pred EEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee---CCCCcc
Confidence 5899999999999999999999986432211 111111111 111 122222 233445
Q ss_pred eeccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCc
Q 045370 59 YSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137 (350)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 137 (350)
.+.+|...|.+++|+|.+...|++|+.|++|++||..++++...+ .|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 678999999999998755557999999999999999988887776 4889999999999999999999999999999886
Q ss_pred cccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEE----------------------
Q 045370 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRR---------------------- 193 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~---------------------- 193 (350)
+....... .......+|...|.+++|+|++ |++++.|++|++||+++++.+..
T Consensus 222 g~~~~~~~---~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 222 GTKTGVFE---DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp CCEEEECB---CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred CcEeeeec---cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 54322110 0000122799999999999998 99999999999999998766543
Q ss_pred ---------------------eccCCCceeEEEEEccCCeEEeeecCc
Q 045370 194 ---------------------FNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 194 ---------------------~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+.+|...|++++|+|++++|++++.|+
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 346888999999999999999888775
No 27
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.4e-29 Score=219.10 Aligned_cols=192 Identities=14% Similarity=0.121 Sum_probs=153.3
Q ss_pred CeecCCCCEEEEEe--CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGS--DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|||||++|++++ .|++|+|||+. .......+ .|...|.+++|+| ++.
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~---------------------------~~~~~~~~-~~~~~V~~v~fsp-dg~ 189 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPS---------------------------DLTEKFEI-ETRGEVKDLHFST-DGK 189 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETT---------------------------TTEEEEEE-ECSSCCCEEEECT-TSS
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECC---------------------------CCcEEEEe-CCCCceEEEEEcc-CCc
Confidence 47999999987544 78999999998 34444444 5788999999965 788
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEE---EecCCceeEEEEcCCCcEEEEEccCC----eEEEEeCCccccccccccccccc
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQT---QVYPQAVTAIAFHPGEQLLFAGSIDG----RIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
++++++. +.+.+|+..++..... ..|...+.+++|+|++.++++++.|+ .++.|++...... ....
T Consensus 190 ~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~------~~~~ 262 (365)
T 4h5i_A 190 VVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS------VLRS 262 (365)
T ss_dssp EEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE------EEEE
T ss_pred eEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec------ceee
Confidence 8998885 4577777777766544 24677899999999999999999887 6888887643221 1223
Q ss_pred eeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe-ccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 152 SVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF-NHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
..+.+|...|++++|+|++ |++|+.|+.|+|||+++++++..+ .+|..+|++|+|+|||++|++++.|. .+++|++
T Consensus 263 ~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-tvrvw~i 341 (365)
T 4h5i_A 263 KQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN-TIHIIKL 341 (365)
T ss_dssp EEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS-EEEEEEC
T ss_pred eeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC-eEEEEEc
Confidence 4677899999999999999 999999999999999999999886 68999999999999999999888764 4445554
Q ss_pred C
Q 045370 229 P 229 (350)
Q Consensus 229 ~ 229 (350)
+
T Consensus 342 p 342 (365)
T 4h5i_A 342 P 342 (365)
T ss_dssp C
T ss_pred C
Confidence 3
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=3.6e-29 Score=219.32 Aligned_cols=199 Identities=22% Similarity=0.257 Sum_probs=157.6
Q ss_pred CeecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee-----ccccCCceEEEEee
Q 045370 1 MVFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS-----LEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~ 74 (350)
+.|+|++ .+|++|+.|++|++||+.+ ...+..+ .+|...|.++.|++
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~---------------------------~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTT---------------------------GQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTT---------------------------CCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCC---------------------------CcEEEEeecccCCCCccCeEEEEeec
Confidence 3577764 5799999999999999983 3333222 57999999999988
Q ss_pred CCCcEEEEEeCCCcEEEEeCCC-CceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccce
Q 045370 75 GGTTFFVSSSLDATCKVWDLGS-GILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS 152 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 152 (350)
.++.++++|+.|++|++||++. +..+..+ .|...|.+++|+|++.+|++|+.||.|++||++++.......... .
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~---~ 292 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP---D 292 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC---S
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc---c
Confidence 7889999999999999999984 4555554 589999999999999999999999999999999754332111100 0
Q ss_pred eeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe----ccCCCceeEEEEEccCCeEEeeecCccccccc
Q 045370 153 VLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF----NHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 153 ~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
....+...|++++|+|++ |++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|++|++++.|+ .+++|
T Consensus 293 ~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-~i~iW 371 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-NLKIW 371 (380)
T ss_dssp SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-CEEEE
T ss_pred ccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-CEEEE
Confidence 111233458999999999 999999999999999999888777 57999999999999999999887764 34445
Q ss_pred cCCc
Q 045370 227 RMPS 230 (350)
Q Consensus 227 ~~~~ 230 (350)
.+..
T Consensus 372 ~~~~ 375 (380)
T 3iz6_a 372 AFSG 375 (380)
T ss_dssp ECCS
T ss_pred ecCC
Confidence 4443
No 29
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.2e-29 Score=215.45 Aligned_cols=194 Identities=19% Similarity=0.273 Sum_probs=163.1
Q ss_pred CeecCC---CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 1 MVFSDD---GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~d---g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
|+|+|+ |++|++|+.||.|++||+.+. .......+.+|...|.+++|++ ++
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~-~~ 98 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDS-------------------------GQTIPKAQQMHTGPVLDVCWSD-DG 98 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTT-------------------------SCEEEEEEEECSSCEEEEEECT-TS
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCC-------------------------CceeEEEeccccCCEEEEEECc-CC
Confidence 579999 699999999999999999820 1222356778999999999976 77
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEE--cCCCcEEEEEccCCeEEEEeCCccccccccccc--------
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAF--HPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVG-------- 147 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------- 147 (350)
.+|++++.||.|++||+.+++......|...|.+++| +|++.+|++++.||.|++||++.+.........
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred CEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 8999999999999999999999888899999999999 899999999999999999999865422110000
Q ss_pred ---------------------------------------------------------------------c---ccceeee
Q 045370 148 ---------------------------------------------------------------------E---DQHSVLK 155 (350)
Q Consensus 148 ---------------------------------------------------------------------~---~~~~~~~ 155 (350)
. .....+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 0 1222344
Q ss_pred ccCC------------ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 156 GHNG------------SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 156 ~~~~------------~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+|.. .|++++|+|++ |++|+.||.|++||+.+++.+..+..|..+|.+++|+|++++|++++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 5544 69999999998 99999999999999999999999999999999999999999999998875
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.6e-28 Score=212.26 Aligned_cols=188 Identities=19% Similarity=0.255 Sum_probs=154.9
Q ss_pred cC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEE
Q 045370 4 SD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVS 82 (350)
Q Consensus 4 s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 82 (350)
++ |+++|+||+.|++|++||+....... ........+.+|...|.+++|++ ++.++++
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~--------------------~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s 93 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNG--------------------YFGIPHKALTGHNHFVSDLALSQ-ENCFAIS 93 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSS--------------------BSEEEEEEECCCSSCEEEEEECS-STTEEEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCccc--------------------ccccccchhccCCCceEEEEECC-CCCEEEE
Confidence 55 89999999999999999987311000 01234556789999999999966 6789999
Q ss_pred EeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCce
Q 045370 83 SSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSI 161 (350)
Q Consensus 83 ~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i 161 (350)
|+.|++|++||+.+++.+..+ .|...|.+++|+|++++|++++.|+.|++||+...... ......+|...|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~--------~~~~~~~~~~~v 165 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF--------SSAEKENHSDWV 165 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE--------ECCTTTSCSSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee--------eeecccCCCcee
Confidence 999999999999999888775 48999999999999999999999999999998732111 011223688999
Q ss_pred EEEEecCCe------------EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 162 TALAFSASH------------LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 162 ~~~~~~~~~------------l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
.+++|+|++ +++++.||.|++|| .+.+....+.+|...|.+++|+|++++|++++.|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe
Confidence 999999862 89999999999999 456777888899999999999999999998887753
No 31
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7.5e-29 Score=213.81 Aligned_cols=204 Identities=18% Similarity=0.184 Sum_probs=163.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-CCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-GTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~ 79 (350)
|+|+|+|++|++|+.||.|++||+.+.. ........+.+|...|.+++|++. ++.+
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------------------~~~~~~~~~~~~~~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDT-----------------------SNWELSDSWRAHDSSIVAIDWASPEYGRI 73 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSS-----------------------CCEEEEEEEECCSSCEEEEEECCGGGCSE
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCC-----------------------CcceecceeccCCCcEEEEEEcCCCCCCE
Confidence 5799999999999999999999998310 011345667789999999999875 4789
Q ss_pred EEEEeCCCcEEEEeCCCC---------ceEEEE-ecCCceeEEEEcCC--CcEEEEEccCCeEEEEeCCcccccccccc-
Q 045370 80 FVSSSLDATCKVWDLGSG---------ILIQTQ-VYPQAVTAIAFHPG--EQLLFAGSIDGRIFVSPLKFLLLEDHFIV- 146 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~---------~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~- 146 (350)
|++|+.||.|++||+.++ +....+ .|...|.+++|+|+ +.+|++++.||.|++||++..........
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc
Confidence 999999999999999986 334443 58899999999999 99999999999999999987653221100
Q ss_pred -----------------------------------------------cc--ccceeeeccCCceEEEEecCC-----e-E
Q 045370 147 -----------------------------------------------GE--DQHSVLKGHNGSITALAFSAS-----H-L 171 (350)
Q Consensus 147 -----------------------------------------------~~--~~~~~~~~~~~~i~~~~~~~~-----~-l 171 (350)
.. .....+.+|...|++++|+|+ . |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 00 114456789999999999999 4 9
Q ss_pred EEEeCCCcEEEEECCCc----------------------------------------------eEEEEeccCCCceeEEE
Q 045370 172 ISASEDKTVCLWDVTRR----------------------------------------------VSIRRFNHKKGVVTNLV 205 (350)
Q Consensus 172 ~s~~~dg~v~iwd~~~~----------------------------------------------~~~~~~~~~~~~v~~l~ 205 (350)
++|+.||.|++||++++ +.+..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 99999999999999875 67777888999999999
Q ss_pred EEccCCeEEeeecCccccccccC
Q 045370 206 VIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 206 ~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
|+|++++|++++.|+ .+.+|++
T Consensus 314 ~s~~~~~l~s~~~dg-~v~iw~~ 335 (351)
T 3f3f_A 314 WNLTGTILSSAGDDG-KVRLWKA 335 (351)
T ss_dssp ECSSSCCEEEEETTS-CEEEEEE
T ss_pred EcCCCCEEEEecCCC-cEEEEec
Confidence 999999999888764 3444444
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1e-28 Score=217.40 Aligned_cols=192 Identities=20% Similarity=0.313 Sum_probs=157.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.|++|++||+.+ ...... ..+...+.+++|++.++.++
T Consensus 171 ~~~~p~~~~l~s~s~d~~v~iwd~~~---------------------------~~~~~~-~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 171 LDYFPSGDKLVSGSGDRTVRIWDLRT---------------------------GQCSLT-LSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTT---------------------------TEEEEE-EECSSCEEEEEECSTTCCEE
T ss_pred EEEcCCCCEEEEecCCCcEEEEECCC---------------------------CeeEEE-EEcCCCcEEEEEECCCCCEE
Confidence 57999999999999999999999982 333222 24667899999988788999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE--------ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccc--ccccc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ--------VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFI--VGEDQ 150 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~ 150 (350)
++|+.|+.|++||+.++..+..+ .|...|.+++|+|++.+|++|+.||.|++||++......... .....
T Consensus 223 ~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 223 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CE
T ss_pred EEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcc
Confidence 99999999999999999877664 477899999999999999999999999999998643221110 11223
Q ss_pred ceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEc------cCCeEEeeecCc
Q 045370 151 HSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR------QSSLLSEVSNCQ 220 (350)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~------~~~~l~~~~~~~ 220 (350)
...+.+|...|.+++|+|++ |++|+.|+.|++||+.+++.+..+.+|.+.|.+++|++ ++.+|++++.|+
T Consensus 303 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg 380 (393)
T 1erj_A 303 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC 380 (393)
T ss_dssp EEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTS
T ss_pred eEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCC
Confidence 44677899999999999998 99999999999999999999999999999999999986 678899888774
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.2e-29 Score=212.88 Aligned_cols=190 Identities=23% Similarity=0.280 Sum_probs=147.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|++++|++|+.|++|+|||+...... .........+.+|...|.+++|+| ++.+|
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~--------------------~~~~~~~~~~~~h~~~V~~v~~sp-~g~~l 122 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADR--------------------TFEMDLLAIIEGHENEVKGVAWSN-DGYYL 122 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC---------------------------CCCEEEEEEC----CEEEEEECT-TSCEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCc--------------------cccceeEEEEcCCCCcEEEEEECC-CCCEE
Confidence 579999999999999999999998621000 001234566789999999999966 67899
Q ss_pred EEEeCCCcEEEEeCCCC----ceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 81 VSSSLDATCKVWDLGSG----ILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++|+.|++|++||+... +++..+ .|...|.+++|+|++.+|++++.|+.|++||..... ...+..+.
T Consensus 123 as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~--------~~~~~~~~ 194 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD--------WECVAVLN 194 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--------EEEEEEEC
T ss_pred EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC--------eeEEEEcc
Confidence 99999999999999532 344444 488899999999999999999999999999986431 13445778
Q ss_pred ccCCceEEEEecCC--e--EEEEeCCCcEEEEECCCc--------eEEEEecc-CCCceeEEEEEccCCeEEeeecCc
Q 045370 156 GHNGSITALAFSAS--H--LISASEDKTVCLWDVTRR--------VSIRRFNH-KKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 156 ~~~~~i~~~~~~~~--~--l~s~~~dg~v~iwd~~~~--------~~~~~~~~-~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+|...|.+++|+|+ + |++|+.|++|++||++++ .....+.. |...|.+++|++++ +|++++.|+
T Consensus 195 ~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg 271 (330)
T 2hes_X 195 GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADG 271 (330)
T ss_dssp CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTS
T ss_pred CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCC
Confidence 99999999999998 4 899999999999999765 45555554 88999999999766 677777664
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=7.4e-30 Score=223.37 Aligned_cols=184 Identities=14% Similarity=0.084 Sum_probs=150.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccc--cceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLR--SLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|+|++|++|+.||.|++||+.+ . .....+.+|...|.+++|++ ++.
T Consensus 17 ~~~s~~g~~l~~~~~d~~i~iw~~~~---------------------------~~~~~~~~~~~h~~~v~~~~~s~-~~~ 68 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATNQVELYEQDG---------------------------NGWKHARTFSDHDKIVTCVDWAP-KSN 68 (377)
T ss_dssp CEECSSSSEEECCCSSSCBCEEEEET---------------------------TEEEECCCBCCCSSCEEEEEECT-TTC
T ss_pred EEECCCCCEEEEecCCCEEEEEEccC---------------------------CceEEEEEEecCCceEEEEEEeC-CCC
Confidence 68999999999999999999999982 3 45666788999999999976 678
Q ss_pred EEEEEeCCCcEEEEeCCCCc---eEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 79 FFVSSSLDATCKVWDLGSGI---LIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
+|++++.|++|++||+.++. .... ..|...|.+++|+|++++|++++.|+.|++||++.... ......+
T Consensus 69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~ 141 (377)
T 3dwl_C 69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-------WWVSKHL 141 (377)
T ss_dssp CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------------CCCCEEE
T ss_pred EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc-------ceeeeEe
Confidence 89999999999999999877 3333 46889999999999999999999999999999985431 1123356
Q ss_pred ec-cCCceEEEEecCCe--EEEEeCCCcEEEEECC------------------CceEEEEeccCCCceeEEEEEccCCeE
Q 045370 155 KG-HNGSITALAFSASH--LISASEDKTVCLWDVT------------------RRVSIRRFNHKKGVVTNLVVIRQSSLL 213 (350)
Q Consensus 155 ~~-~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~------------------~~~~~~~~~~~~~~v~~l~~~~~~~~l 213 (350)
.. |...|++++|+|++ |++++.|+.|++||++ .++++..+ .|...|.+++|+|++++|
T Consensus 142 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l 220 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNAL 220 (377)
T ss_dssp CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCE
T ss_pred ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEE
Confidence 66 99999999999998 9999999999999985 46677777 899999999999999999
Q ss_pred EeeecCc
Q 045370 214 SEVSNCQ 220 (350)
Q Consensus 214 ~~~~~~~ 220 (350)
++++.++
T Consensus 221 ~~~~~d~ 227 (377)
T 3dwl_C 221 AYAGHDS 227 (377)
T ss_dssp EEEETTT
T ss_pred EEEeCCC
Confidence 9888774
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-28 Score=210.18 Aligned_cols=186 Identities=21% Similarity=0.204 Sum_probs=146.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee-cc-ccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS-LE-HKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~ 78 (350)
++|+|+ +|++|+.|++|++||+... .......+ .+ |...|.+++|+| ++.
T Consensus 20 ~~~s~~--~las~~~D~~i~lw~~~~~-------------------------~~~~~~~~~~~~h~~~v~~v~~sp-~~~ 71 (330)
T 2hes_X 20 FDFSQG--ILATGSTDRKIKLVSVKYD-------------------------DFTLIDVLDETAHKKAIRSVAWRP-HTS 71 (330)
T ss_dssp EEEETT--EEEEEESSSCEEEEECSSS-------------------------CCEEEEEECTTCCCSCEEEEEECT-TSS
T ss_pred eccCCC--EEEEEcCCCEEEEEEecCC-------------------------CeEEEEEEecCCccCCEEEEEECC-CCC
Confidence 367776 9999999999999999721 01222333 34 999999999966 678
Q ss_pred EEEEEeCCCcEEEEeCCC-------CceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccccc
Q 045370 79 FFVSSSLDATCKVWDLGS-------GILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQ 150 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 150 (350)
+|++|+.|++|++||+.. ...+..+ .|...|.+++|+|++++|++|+.|+.|++||++.... ....
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~------~~~~ 145 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE------EYEC 145 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC------CCEE
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC------CeEE
Confidence 999999999999999853 2344443 5889999999999999999999999999999953210 1123
Q ss_pred ceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCc--eEEEEeccCCCceeEEEEEcc--CCeEEeeecCc
Q 045370 151 HSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRR--VSIRRFNHKKGVVTNLVVIRQ--SSLLSEVSNCQ 220 (350)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~~~ 220 (350)
+..+.+|...|++++|+|++ |++|+.|++|++||..++ +++..+.+|.+.|.+++|+|+ +.+|++++.|+
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 44678899999999999998 999999999999999876 678889999999999999999 66788777664
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.2e-28 Score=227.72 Aligned_cols=180 Identities=27% Similarity=0.363 Sum_probs=158.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|||++|++++.|+.|++||.. ...+..+.+|...|.+++|+| ++.++
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~~----------------------------~~~~~~~~~~~~~v~~~~~s~-d~~~l 441 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNRN----------------------------GQLLQTLTGHSSSVWGVAFSP-DDQTI 441 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTT----------------------------CCEEEEEECCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCC----------------------------CCEEEEecCCCCCeEEEEECC-CCCEE
Confidence 5799999999999999999999975 455677789999999999965 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
++++.|++|++||...........|...|.+++|+|++++|++++.|+.|++||.. .+....+.+|...
T Consensus 442 ~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-----------~~~~~~~~~h~~~ 510 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-----------GQLLQTLTGHSSS 510 (577)
T ss_dssp EEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-----------SCEEEEEECCSSC
T ss_pred EEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-----------CCEEEEEeCCCCC
Confidence 99999999999997644333335689999999999999999999999999999954 2344578899999
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
|++++|+|++ |++++.||.|++||. +++.+..+.+|.++|++++|+|++++|++++.|+.
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 9999999999 999999999999996 67889999999999999999999999998887753
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.2e-28 Score=211.06 Aligned_cols=193 Identities=19% Similarity=0.267 Sum_probs=169.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++|++|+.||.|++||+. .......+.+|...|.+++|++ ++.+|
T Consensus 38 ~~~s~~~~~l~~~~~dg~i~vwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~~-~~~~l 89 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKDSSASVWYSL---------------------------NGERLGTLDGHTGTIWSIDVDC-FTKYC 89 (369)
T ss_dssp EEECTTSCEEEEEESSSCEEEEETT---------------------------TCCEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEEcCCCCEEEEEeCCCEEEEEeCC---------------------------CchhhhhhhhcCCcEEEEEEcC-CCCEE
Confidence 5799999999999999999999998 4667777889999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccccccccc-cccccceee
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLLLEDHFI-VGEDQHSVL 154 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~-~~~~~~~~~ 154 (350)
++++.||.|++||+.+++.+..+.+...+.+++|+|++.++++++.+ |.|.+||+.......... ........+
T Consensus 90 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 90 VTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 99999999999999999999999999999999999999999999998 999999998765332211 122344566
Q ss_pred eccCC--ceEEEEecCCe--EEEEeCCCcEEEEECCC-ceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 155 KGHNG--SITALAFSASH--LISASEDKTVCLWDVTR-RVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 155 ~~~~~--~i~~~~~~~~~--l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
..|.. .+.+++|+|++ +++++.||.|++||+++ ++.+..+..|...|.+++|+|++++|++++.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN 241 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce
Confidence 67776 99999999998 99999999999999999 7889999999999999999999999998887653
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=4.8e-28 Score=212.40 Aligned_cols=181 Identities=18% Similarity=0.240 Sum_probs=153.8
Q ss_pred CeecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee--ccccCCceEEEEeeCCC
Q 045370 1 MVFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS--LEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~ 77 (350)
++|+|+| ++|++|+.||.|+|||+.+ ......+ .+|...|.+++|++.++
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~---------------------------~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDV---------------------------QNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTS---------------------------TTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCC---------------------------cccceeeecCCcCCceeEEEeCCCCC
Confidence 5799999 9999999999999999982 3333333 47999999999987677
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
.+|++++.|+.|++||+.+........ +...|.+++|+|++.+|++++.||.|++||++ ......+
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-----------~~~~~~~ 200 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-----------GHEIFKE 200 (383)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-----------SCEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-----------CCEEEEe
Confidence 899999999999999999644433333 34779999999999999999999999999985 2234477
Q ss_pred eccCCceEEEEecCCe---EEEEeCCCcEEEEECCC----ceEEEEeccCCCceeEEEEEc-cCCeEEeeecCc
Q 045370 155 KGHNGSITALAFSASH---LISASEDKTVCLWDVTR----RVSIRRFNHKKGVVTNLVVIR-QSSLLSEVSNCQ 220 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~~~ 220 (350)
.+|...|.+++|+|++ +++|+.|+.|++||+++ +.++..+ .|...|.+++|+| ++.+|++++.++
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~ 273 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRN 273 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSS
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCC
Confidence 7899999999999987 89999999999999998 6677777 5899999999999 999999888764
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.2e-28 Score=232.50 Aligned_cols=181 Identities=23% Similarity=0.317 Sum_probs=156.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||+|+|||+. .......+.+|...|.+++|++ ++.+|
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~---------------------------~~~~~~~~~~h~~~v~~~~~s~-~~~~l 487 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLA---------------------------AGVSTRRFVGHTKDVLSVAFSL-DNRQI 487 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT---------------------------TTEEEEEEECCSSCEEEEEECT-TSSCE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECC---------------------------CCcceeEEeCCCCCEEEEEEeC-CCCEE
Confidence 4799999999999999999999998 4566677889999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE----ecCCceeEEEEcCCC--cEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ----VYPQAVTAIAFHPGE--QLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
++|+.|++|++||.......... .|...|.+++|+|++ ..+++++.|+.|++||++.. .....+
T Consensus 488 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~----------~~~~~~ 557 (694)
T 3dm0_A 488 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC----------KLRSTL 557 (694)
T ss_dssp EEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC----------CEEEEE
T ss_pred EEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC----------cEEEEE
Confidence 99999999999998765443332 377789999999986 68999999999999999853 334477
Q ss_pred eccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 155 KGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.+|...|++++|+|++ |++|+.||.|++||+++++.+..+. +...|.+++|+|++.+|++++.+.
T Consensus 558 ~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 558 AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEEEEETTE
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEEEEcCCC
Confidence 8999999999999998 9999999999999999999998887 457899999999999998766543
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=4e-28 Score=205.49 Aligned_cols=195 Identities=16% Similarity=0.187 Sum_probs=153.0
Q ss_pred CeecC--CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-C
Q 045370 1 MVFSD--DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-T 77 (350)
Q Consensus 1 i~~s~--dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 77 (350)
|+|+| +|++|+||+.||+|++||+.++ .......+.+|...|.+++|+|.. +
T Consensus 59 v~~s~~~~g~~l~s~s~D~~v~iWd~~~~-------------------------~~~~~~~~~~h~~~v~~v~~~p~~~g 113 (297)
T 2pm7_B 59 VDWAHPKFGTILASCSYDGKVMIWKEENG-------------------------RWSQIAVHAVHSASVNSVQWAPHEYG 113 (297)
T ss_dssp EEECCGGGCSEEEEEETTTEEEEEEBSSS-------------------------CBCCCEEECCCSSCEEEEEECCGGGC
T ss_pred EEecCCCcCCEEEEEcCCCEEEEEEcCCC-------------------------ceEEEEEeecCCCceeEEEeCcCCCC
Confidence 46876 4899999999999999999721 012345567899999999998742 6
Q ss_pred cEEEEEeCCCcEEEEeCCCCc---eEEEEecCCceeEEEEcCC-------------CcEEEEEccCCeEEEEeCCccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGI---LIQTQVYPQAVTAIAFHPG-------------EQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
.+|++|+.|++|++||++++. ......|...|.+++|+|+ +++|++|+.|+.|++||++.....
T Consensus 114 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~ 193 (297)
T 2pm7_B 114 PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 193 (297)
T ss_dssp SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE
T ss_pred cEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce
Confidence 789999999999999998763 2233468889999999997 579999999999999998753210
Q ss_pred cccccccccceeeeccCCceEEEEecCC----e-EEEEeCCCcEEEEECCCce---EEEEe--ccCCCceeEEEEEccCC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSAS----H-LISASEDKTVCLWDVTRRV---SIRRF--NHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~-l~s~~~dg~v~iwd~~~~~---~~~~~--~~~~~~v~~l~~~~~~~ 211 (350)
......+.+|...|.+++|+|+ . |++++.|++|+|||+++.. ....+ ..|...|.+++|+|+++
T Consensus 194 ------~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 194 ------YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp ------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred ------EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC
Confidence 1123467899999999999997 3 9999999999999998742 12233 45788999999999999
Q ss_pred eEEeeecCcccccccc
Q 045370 212 LLSEVSNCQRKLKKDR 227 (350)
Q Consensus 212 ~l~~~~~~~~~~~~~~ 227 (350)
+|++++.|+. +++|.
T Consensus 268 ~las~~~D~~-v~lw~ 282 (297)
T 2pm7_B 268 VLALSGGDNK-VTLWK 282 (297)
T ss_dssp CEEEEETTSC-EEEEE
T ss_pred EEEEEcCCCc-EEEEE
Confidence 9998887653 34443
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=213.29 Aligned_cols=188 Identities=19% Similarity=0.240 Sum_probs=158.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-CCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-GTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~ 79 (350)
++|+|+|++|++|+.||.|+|||+... .......+.+|...|.+++|+++ ++.+
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 71 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGE-------------------------THKLIDTLTGHEGPVWRVDWAHPKFGTI 71 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCGGGCSE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCC-------------------------cceeeeEecCCCCcEEEEEeCCCCCCCE
Confidence 579999999999999999999998720 23455677889999999999764 2789
Q ss_pred EEEEeCCCcEEEEeCCCCc--eEEEE-ecCCceeEEEEcCC--CcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 80 FVSSSLDATCKVWDLGSGI--LIQTQ-VYPQAVTAIAFHPG--EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
|++|+.||.|++||+.+++ ....+ .|...|.+++|+|+ +.+|++++.||.|++||++.... .....+
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--------~~~~~~ 143 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------TSPIII 143 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--------CCEEEE
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--------eeeEEe
Confidence 9999999999999999986 44443 48889999999999 99999999999999999986422 223356
Q ss_pred eccCCceEEEEecC-------------Ce--EEEEeCCCcEEEEECCCce----EEEEeccCCCceeEEEEEcc---CCe
Q 045370 155 KGHNGSITALAFSA-------------SH--LISASEDKTVCLWDVTRRV----SIRRFNHKKGVVTNLVVIRQ---SSL 212 (350)
Q Consensus 155 ~~~~~~i~~~~~~~-------------~~--l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~---~~~ 212 (350)
..|...|++++|+| ++ +++++.||.|++||++++. .+..+..|..+|.+++|+|+ +.+
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 78999999999999 45 9999999999999998653 56677889999999999999 889
Q ss_pred EEeeecCcc
Q 045370 213 LSEVSNCQR 221 (350)
Q Consensus 213 l~~~~~~~~ 221 (350)
|++++.++.
T Consensus 224 l~s~~~dg~ 232 (379)
T 3jrp_A 224 LASVSQDRT 232 (379)
T ss_dssp EEEEETTSC
T ss_pred EEEEeCCCE
Confidence 998887753
No 42
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=219.83 Aligned_cols=209 Identities=15% Similarity=0.188 Sum_probs=156.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc------------CCce
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK------------SSVT 68 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~ 68 (350)
|+|+|+|++||+|+.||.|+|||+.+....... ..........+.+|. ..|.
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~----------------~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSH----------------SRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CC----------------CCCCEEEEEEEECCCCEEEGGGTEEECCCCC
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcc----------------cccceeEecccccccccccccccccccCceE
Confidence 589999999999999999999999842210000 000112455667887 8899
Q ss_pred EEEEeeCCC-cEEEEEeCCCcEEEEeCCCCceE---------------------------------------EE--EecC
Q 045370 69 GLLTISGGT-TFFVSSSLDATCKVWDLGSGILI---------------------------------------QT--QVYP 106 (350)
Q Consensus 69 ~~~~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~---------------------------------------~~--~~~~ 106 (350)
+++|++.+. .++++++.|++|++||+.++... .. ..|.
T Consensus 98 ~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp EEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 999987533 68999999999999998764432 11 2488
Q ss_pred CceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEE
Q 045370 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLW 183 (350)
Q Consensus 107 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iw 183 (350)
..|.+++|+|++++|++| .||.|++||++......... ......+.+|...|++++|+|++ |++|+.||.|++|
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIV--DIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEE--ECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeee--ecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 899999999999999999 79999999998432111000 00011466899999999999986 9999999999999
Q ss_pred ECCCceE----EEEeccCCC------------ceeEEEEEccCCeEEeeecCccccccccCCc
Q 045370 184 DVTRRVS----IRRFNHKKG------------VVTNLVVIRQSSLLSEVSNCQRKLKKDRMPS 230 (350)
Q Consensus 184 d~~~~~~----~~~~~~~~~------------~v~~l~~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (350)
|+++++. +..+..|.. .|.+++|+|++++|++++. ..+.+|++..
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 9999886 677877765 8999999999999997776 5566665543
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.3e-29 Score=219.24 Aligned_cols=196 Identities=14% Similarity=0.067 Sum_probs=152.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.||+|++||+.+.. .......+..|...|.+++|++ ++.+|
T Consensus 61 ~~~s~~~~~l~s~s~d~~v~vwd~~~~~------------------------~~~~~~~~~~~~~~v~~~~~~~-~~~~l 115 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDG------------------------TWKQTLVLLRLNRAATFVRWSP-NEDKF 115 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------------------------------CCCCEEECCCCSSCEEEEECCT-TSSCC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCC------------------------ceeeeeEecccCCceEEEEECC-CCCEE
Confidence 5799999999999999999999998310 0124556678999999999976 67889
Q ss_pred EEEeCCCcEEEEeCCCCce---EEEEe--cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccc--------cc
Q 045370 81 VSSSLDATCKVWDLGSGIL---IQTQV--YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFI--------VG 147 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~ 147 (350)
++|+.|+.|++||+.+++. ...+. |...|.+++|+|++.+|++++.||.|++||+.......... ..
T Consensus 116 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 195 (377)
T 3dwl_C 116 AVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPF 195 (377)
T ss_dssp EEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCE
T ss_pred EEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccch
Confidence 9999999999999998863 44443 88999999999999999999999999999986433221100 01
Q ss_pred cccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceE----EEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVS----IRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
......+ +|...|++++|+|++ |++++.||.|++||+++++. +..+..|..+|.+++|+|++++|++++.+..
T Consensus 196 ~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 196 NTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp EEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred hhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 2233345 899999999999998 99999999999999999876 7788889999999999999999997765544
Q ss_pred c
Q 045370 222 K 222 (350)
Q Consensus 222 ~ 222 (350)
+
T Consensus 275 ~ 275 (377)
T 3dwl_C 275 I 275 (377)
T ss_dssp E
T ss_pred E
Confidence 3
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=1.4e-27 Score=203.50 Aligned_cols=190 Identities=20% Similarity=0.291 Sum_probs=157.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.||.|++||+. .......+.+|...|.++.|++ ++.++
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~---------------------------~~~~~~~~~~~~~~v~~~~~~~-~~~~l 122 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVS---------------------------SGKCLKTLKGHSNYVFCCNFNP-QSNLI 122 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCSSCEEEEEECS-SSSEE
T ss_pred EEEcCCCCEEEEECCCCEEEEEECC---------------------------CCcEEEEEcCCCCCEEEEEEcC-CCCEE
Confidence 5799999999999999999999998 4566777889999999999966 67899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.|+.|++||+.+++.+..+. |..+|.+++|+|++.+|++++.||.|++||++++.... .....+..
T Consensus 123 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~---------~~~~~~~~ 193 (312)
T 4ery_A 123 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK---------TLIDDDNP 193 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---------EECCSSCC
T ss_pred EEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee---------EEeccCCC
Confidence 999999999999999998887764 78899999999999999999999999999998543221 12235667
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeE--EEEE-ccCCeEEeeecCccccccccC
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTN--LVVI-RQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~--l~~~-~~~~~l~~~~~~~~~~~~~~~ 228 (350)
.+.+++|+|++ |++++.||.|++||+++++.+..+.+|...... ..++ +++.+|++++.|+ .+.+|+.
T Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-~i~vwd~ 266 (312)
T 4ery_A 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN-LVYIWNL 266 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS-CEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC-EEEEEEC
Confidence 89999999998 999999999999999999999999887665433 3444 5678888777664 3344444
No 45
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=3.3e-28 Score=224.68 Aligned_cols=212 Identities=26% Similarity=0.345 Sum_probs=175.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||.. ...+..+.+|...|.+++|++ ++.+|
T Consensus 350 ~~~s~~g~~l~~~~~dg~v~~~~~~----------------------------~~~~~~~~~~~~~v~~~~~s~-dg~~l 400 (577)
T 2ymu_A 350 VAFSPDGQTIASASDDKTVKLWNRN----------------------------GQLLQTLTGHSSSVRGVAFSP-DGQTI 400 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT----------------------------CCEEEEEECCSSCEEEEEECT-TSSCE
T ss_pred EEECCCCCEEEEEeCCCEEEEEcCC----------------------------CCEEEEecCCCCCeEEEEECC-CCCEE
Confidence 4799999999999999999999976 456667788999999999965 77889
Q ss_pred EEEeCCCcEEEEeCCCCceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++++.|+.|++||.. ++.+.. ..|...|.+++|+|++++|++++.|+.|++||.. ......+.+|..
T Consensus 401 ~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-----------~~~~~~~~~~~~ 468 (577)
T 2ymu_A 401 ASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-----------GQLLQTLTGHSS 468 (577)
T ss_dssp EEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------SCEEEEEECCSS
T ss_pred EEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-----------CCEEEEEcCCCC
Confidence 999999999999965 555554 4588999999999999999999999999999965 233447789999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccCCccccCCCC
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRMPSLEKYPQL 237 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
.|++++|+|++ |++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+ .+++|+... .
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg-~v~lwd~~~--~---- 540 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK-TVKLWNRNG--Q---- 540 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS-EEEEECTTS--C----
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC-EEEEEeCCC--C----
Confidence 99999999998 999999999999995 6788999999999999999999999999887765 344554311 0
Q ss_pred ccccccceEEeeccccCCCCcccccccccchhh
Q 045370 238 NSLSMEMVILLQSCFFNKDDQCSINIRRTKSLF 270 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (350)
.+..+.+|...+..+.|++++.++
T Consensus 541 ---------~~~~~~~h~~~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 541 ---------LLQTLTGHSSSVWGVAFSPDGQTI 564 (577)
T ss_dssp ---------EEEEEECCSSCEEEEEECTTSSCE
T ss_pred ---------EEEEEcCCCCCEEEEEEcCCCCEE
Confidence 122334666677777777777654
No 46
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=3.4e-28 Score=226.05 Aligned_cols=179 Identities=16% Similarity=0.199 Sum_probs=155.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|||||++|++++ ++.|++|++. .......+.+|...|.+++|+| ++.+|
T Consensus 24 ~~~spdg~~l~~~~-~~~v~l~~~~---------------------------~~~~~~~~~~h~~~v~~~~~sp-dg~~l 74 (611)
T 1nr0_A 24 LGNTPAGDKIQYCN-GTSVYTVPVG---------------------------SLTDTEIYTEHSHQTTVAKTSP-SGYYC 74 (611)
T ss_dssp CEECTTSSEEEEEE-TTEEEEEETT---------------------------CSSCCEEECCCSSCEEEEEECT-TSSEE
T ss_pred EeeCCCCCEEEeCC-CCEEEEecCC---------------------------CcccCeEecCCCCceEEEEECC-CCcEE
Confidence 68999999999998 5799999997 3566777889999999999965 78999
Q ss_pred EEEeCCCcEEEEeCCCCce--EEE-EecCCceeEEEEcCCCcEEEEEccC----CeEEEEeCCcccccccccccccccee
Q 045370 81 VSSSLDATCKVWDLGSGIL--IQT-QVYPQAVTAIAFHPGEQLLFAGSID----GRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
++|+.|++|++||+.+++. ... ..|.++|.+++|+|++++|++++.+ +.|++||... ....
T Consensus 75 asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~------------~~~~ 142 (611)
T 1nr0_A 75 ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT------------SNGN 142 (611)
T ss_dssp EEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC------------BCBC
T ss_pred EEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC------------Ccce
Confidence 9999999999999976543 333 3488999999999999999988765 4788888532 2236
Q ss_pred eeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 154 LKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 154 ~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+.+|...|++++|+|++ |++|+.|++|++||..+++.+..+.+|...|.+++|+|++++|++++.|+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCC
Confidence 77999999999999986 99999999999999999999999999999999999999999999888775
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-28 Score=223.13 Aligned_cols=193 Identities=12% Similarity=0.045 Sum_probs=152.5
Q ss_pred CeecCC------CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee
Q 045370 1 MVFSDD------GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~d------g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 74 (350)
|+|+|+ +.+||+|+.||+|+|||+......... .. ....+...+.+|...|.+++|++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~-----------~~-----~~~~p~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV-----------FK-----MCEKPSLTLSLADSLITTFDFLS 276 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE-----------EE-----CCCSCSEEECCTTTCEEEEEESS
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc-----------ce-----eecCceEEEEcCCCCEEEEEecC
Confidence 468886 679999999999999999742111000 00 01123345678999999999976
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCc-eEEE-EecCCceeEE--EEcCCC-cEEEEEccCCeEEEEeCCccccccccccccc
Q 045370 75 GGTTFFVSSSLDATCKVWDLGSGI-LIQT-QVYPQAVTAI--AFHPGE-QLLFAGSIDGRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~~~-~~~~-~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 149 (350)
+ ..|++|+.||+|++||++++. +... ..|...|.++ .|+|++ .+|++|+.|++|++||++++...
T Consensus 277 ~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~-------- 346 (524)
T 2j04_B 277 P--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT-------- 346 (524)
T ss_dssp S--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH--------
T ss_pred C--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc--------
Confidence 3 479999999999999999764 3333 4588999999 567887 89999999999999999864432
Q ss_pred cceeeeccCC--ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 150 QHSVLKGHNG--SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 150 ~~~~~~~~~~--~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
..+.+|.. .|.+++|+|++ +++++.|++|++||++++.++..+.+|.+.|++|+|+|++++|++|+.|+.
T Consensus 347 --~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 347 --KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp --CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE
T ss_pred --cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE
Confidence 24445543 58899999987 999999999999999999888888899999999999999999998887753
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.6e-28 Score=213.20 Aligned_cols=200 Identities=20% Similarity=0.319 Sum_probs=162.4
Q ss_pred CeecCC-CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDD-GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~d-g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+ +++|++|+.||.|++||+.+........ ..........|...|.+++|++.++.+
T Consensus 119 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 180 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY------------------TPLTPGQSMSSVDEVISLAWNQSLAHV 180 (416)
T ss_dssp EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC------------------CCBCCCCSCCSSCCCCEEEECSSCTTE
T ss_pred EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc------------------cccccccccCCCCCeeEEEeCCCCCcE
Confidence 579998 8999999999999999998421000000 001122346799999999998865789
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEec-------CCceeEEEEcCCC-cEEEEEccCC---eEEEEeCCcccccccccccc
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVY-------PQAVTAIAFHPGE-QLLFAGSIDG---RIFVSPLKFLLLEDHFIVGE 148 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~ 148 (350)
+++++.|+.|++||+.+++.+..+.. ...+.+++|+|++ .++++++.|+ .|++||++.. .
T Consensus 181 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~---------~ 251 (416)
T 2pm9_A 181 FASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA---------N 251 (416)
T ss_dssp EEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST---------T
T ss_pred EEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC---------C
Confidence 99999999999999999998887653 6789999999997 6899999998 9999999853 2
Q ss_pred ccceeee-ccCCceEEEEecC-Ce--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccC-CeEEeeecCcccc
Q 045370 149 DQHSVLK-GHNGSITALAFSA-SH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQS-SLLSEVSNCQRKL 223 (350)
Q Consensus 149 ~~~~~~~-~~~~~i~~~~~~~-~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~~~~~~ 223 (350)
.....+. +|...|++++|+| ++ |++++.||.|++||+++++.+..+..|...|.+++|+|++ .+|++++.++ .+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~-~i 330 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN-KI 330 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS-EE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC-cE
Confidence 3344666 8999999999999 66 9999999999999999999999999999999999999999 7888777664 33
Q ss_pred ccccC
Q 045370 224 KKDRM 228 (350)
Q Consensus 224 ~~~~~ 228 (350)
.+|++
T Consensus 331 ~iw~~ 335 (416)
T 2pm9_A 331 EVQTL 335 (416)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 34433
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.3e-27 Score=211.05 Aligned_cols=224 Identities=18% Similarity=0.191 Sum_probs=173.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||+. .......+.+|...|.++.| ++.++
T Consensus 140 v~~s~~~~~l~~~~~dg~i~iwd~~---------------------------~~~~~~~~~~~~~~v~~~~~---~~~~l 189 (401)
T 4aez_A 140 VKWSHDGSFLSVGLGNGLVDIYDVE---------------------------SQTKLRTMAGHQARVGCLSW---NRHVL 189 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TCCEEEEECCCSSCEEEEEE---ETTEE
T ss_pred EEECCCCCEEEEECCCCeEEEEECc---------------------------CCeEEEEecCCCCceEEEEE---CCCEE
Confidence 5799999999999999999999998 46667778899999999999 34689
Q ss_pred EEEeCCCcEEEEeCCC-CceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 81 VSSSLDATCKVWDLGS-GILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~-~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++|+.||.|++||++. +..... ..|...|.+++|+|++.+|++|+.||.|++||++. ......+..|.
T Consensus 190 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~~~ 259 (401)
T 4aez_A 190 SSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS----------SIPKFTKTNHN 259 (401)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC----------SSEEEEECCCS
T ss_pred EEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC----------CCccEEecCCc
Confidence 9999999999999984 444444 45889999999999999999999999999999984 33444677899
Q ss_pred CceEEEEecCCe---EEEEe--CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec-CccccccccCCc--
Q 045370 159 GSITALAFSASH---LISAS--EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN-CQRKLKKDRMPS-- 230 (350)
Q Consensus 159 ~~i~~~~~~~~~---l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-~~~~~~~~~~~~-- 230 (350)
..|.+++|+|++ +++|+ .|+.|++||+++++.+..+. +...|.+++|+|++++++++++ .+..+.+|++..
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc
Confidence 999999999977 66654 79999999999999999887 6688999999999999998542 334444443322
Q ss_pred ---------cccCCCCccccccceEEeeccccCCCCcccccccccch
Q 045370 231 ---------LEKYPQLNSLSMEMVILLQSCFFNKDDQCSINIRRTKS 268 (350)
Q Consensus 231 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 268 (350)
....+....+++++..++ .+..++.+.+|...++.
T Consensus 339 ~~~~~~~~~h~~~v~~~~~s~dg~~l~---s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 339 LTKQVDIPAHDTRVLYSALSPDGRILS---TAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEEECCSSCCCEEEECTTSSEEE---EECTTSEEEEEECCC--
T ss_pred ceeEEEecCCCCCEEEEEECCCCCEEE---EEeCCCcEEEEECCCCc
Confidence 112233334455554444 23346666666555544
No 50
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=6.7e-28 Score=227.45 Aligned_cols=190 Identities=22% Similarity=0.260 Sum_probs=159.5
Q ss_pred CeecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|++ ++|+||+.||+|++||+..... ........+.+|...|.+++|++ ++.+
T Consensus 388 v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~----------------------~~~~~~~~~~~h~~~v~~v~~s~-~g~~ 444 (694)
T 3dm0_A 388 IATPIDNADIIVSASRDKSIILWKLTKDDK----------------------AYGVAQRRLTGHSHFVEDVVLSS-DGQF 444 (694)
T ss_dssp EECCTTCCSEEEEEETTSEEEEEECCCSTT----------------------CSCEEEEEEECCSSCEEEEEECT-TSSE
T ss_pred EEecCCCCCEEEEEeCCCcEEEEEccCCCc----------------------ccccccceecCCCCcEEEEEECC-CCCE
Confidence 4688865 7999999999999999873110 01233456789999999999966 7789
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
|++|+.|++|++||+.++.....+ .|...|.+++|+|++++|++++.|+.|++||........ ......+|.
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-------~~~~~~~h~ 517 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-------ISEGGEGHR 517 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-------ECSSTTSCS
T ss_pred EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-------eccCCCCCC
Confidence 999999999999999999888775 589999999999999999999999999999976321110 011234788
Q ss_pred CceEEEEecCCe----EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 159 GSITALAFSASH----LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 159 ~~i~~~~~~~~~----l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..|.+++|+|++ +++|+.|+.|++||+++++....+.+|.+.|++++|+|++++|++++.|+
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 999999999975 99999999999999999999999999999999999999999999888764
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.3e-28 Score=218.51 Aligned_cols=182 Identities=20% Similarity=0.196 Sum_probs=151.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||+.+ ......+..| .+..+.++++++.+|
T Consensus 62 ~~~s~~g~~l~~~~~d~~v~i~d~~~---------------------------~~~~~~~~~~--~~~~~~~~~~~~~~l 112 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLDGHDFLFNTII---------------------------RDGSKMLKRA--DYTAVDTAKLQMRRF 112 (420)
T ss_dssp CEEEEEETTEEEEEETTEEEEEECCS---------------------------EETTTTSCSC--CEEEEEEECSSSCEE
T ss_pred eeeeecCCeEEEEEcCCcEEEEEecc---------------------------cceeeEEecC--CceEEEEEecCCCEE
Confidence 57999999999999999999999983 3333333334 566666667788999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.||.|++||+.++.....+ .|...|.+++|+|++++|++++.||.|++||+..+ .....+.+|..
T Consensus 113 ~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~----------~~~~~~~~h~~ 182 (420)
T 3vl1_A 113 ILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG----------SNPRTLIGHRA 182 (420)
T ss_dssp EEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----------CCCEEEECCSS
T ss_pred EEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC----------cCceEEcCCCC
Confidence 99999999999999999888775 69999999999999999999999999999999843 34457789999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEecc---CC---------------------CceeEEEEEccCCeE
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH---KK---------------------GVVTNLVVIRQSSLL 213 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~---~~---------------------~~v~~l~~~~~~~~l 213 (350)
.|++++|+|++ |++++.||.|++||+++++.+..+.. +. ..+.+++|+|++++|
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 99999999998 99999999999999999999988864 33 344445557888899
Q ss_pred EeeecCcc
Q 045370 214 SEVSNCQR 221 (350)
Q Consensus 214 ~~~~~~~~ 221 (350)
++++.++.
T Consensus 263 ~~~~~dg~ 270 (420)
T 3vl1_A 263 IAGHVSGV 270 (420)
T ss_dssp EEEETTSC
T ss_pred EEEcCCCe
Confidence 98877653
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=2.1e-28 Score=212.80 Aligned_cols=200 Identities=12% Similarity=0.152 Sum_probs=165.0
Q ss_pred CeecCC----CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC
Q 045370 1 MVFSDD----GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG 76 (350)
Q Consensus 1 i~~s~d----g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 76 (350)
++|+|+ |.+|++|+.||.|++||+. .......+.+|...|.+++|++.+
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~---------------------------~~~~~~~~~~~~~~i~~~~~~~~~ 127 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPI---------------------------TMQCIKHYVGHGNAINELKFHPRD 127 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTT---------------------------TCCEEEEEESCCSCEEEEEECSSC
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEch---------------------------hceEeeeecCCCCcEEEEEECCCC
Confidence 468888 6799999999999999998 456677778899999999997757
Q ss_pred CcEEEEEeCCCcEEEEeCCCCceEEEE----ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc------
Q 045370 77 TTFFVSSSLDATCKVWDLGSGILIQTQ----VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV------ 146 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------ 146 (350)
+.+|++|+.||.|++||+.+++.+..+ .|...|.+++|+|++.+|++++.||.|++||++.+........
T Consensus 128 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 207 (366)
T 3k26_A 128 PNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNP 207 (366)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCG
T ss_pred CCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecC
Confidence 889999999999999999999988886 5889999999999999999999999999999987653321110
Q ss_pred ------------ccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCc--------------eEEEEeccCCCc
Q 045370 147 ------------GEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRR--------------VSIRRFNHKKGV 200 (350)
Q Consensus 147 ------------~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~--------------~~~~~~~~~~~~ 200 (350)
..........|...|.+++|+++.+++++.||.|++||++++ ..+..+..|...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (366)
T 3k26_A 208 NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD 287 (366)
T ss_dssp GGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC
T ss_pred CCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc
Confidence 011122334599999999999666999999999999999876 347788889999
Q ss_pred eeEEEEEcc--CCeEEeeecCccccccccC
Q 045370 201 VTNLVVIRQ--SSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 201 v~~l~~~~~--~~~l~~~~~~~~~~~~~~~ 228 (350)
|.+++|+|+ +++|++++.++ .+.+|++
T Consensus 288 v~~~~~s~~~~~~~l~~~~~dg-~i~vwd~ 316 (366)
T 3k26_A 288 IWYMRFSMDFWQKMLALGNQVG-KLYVWDL 316 (366)
T ss_dssp SSCCCCEECTTSSEEEEECTTS-CEEEEEC
T ss_pred EEEEEEcCCCCCcEEEEEecCC-cEEEEEC
Confidence 999999999 99999887665 3334443
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=1.5e-27 Score=207.99 Aligned_cols=186 Identities=16% Similarity=0.122 Sum_probs=159.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccc--ceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRS--LLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|+|++|++|+.||.|++||+. ... ....+.+|...|.+++|++ ++.
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~---------------------------~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 65 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKS---------------------------GNKWVQVHELKEHNGQVTGVDWAP-DSN 65 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEE---------------------------TTEEEEEEEEECCSSCEEEEEEET-TTT
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCC---------------------------CCcEEeeeeecCCCCcccEEEEeC-CCC
Confidence 5799999999999999999999998 233 5667789999999999976 778
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEE---EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQT---QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++++++.||.|++||+.+++.... ..|...|.+++|+|++++|++++.||.|++||++...... .......
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~------~~~~~~~ 139 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW------VCKHIKK 139 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE------EEEEECT
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce------eeeeeec
Confidence 999999999999999998875544 3478899999999999999999999999999998543110 0111335
Q ss_pred ccCCceEEEEecCCe--EEEEeCCCcEEEEEC------------------CCceEEEEeccCCCceeEEEEEccCCeEEe
Q 045370 156 GHNGSITALAFSASH--LISASEDKTVCLWDV------------------TRRVSIRRFNHKKGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~ 215 (350)
.|...|.+++|+|++ |++++.||.|++||+ ..++.+..+..|...|.+++|+|++++|++
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence 688999999999998 999999999999995 467889999889999999999999999998
Q ss_pred eecCc
Q 045370 216 VSNCQ 220 (350)
Q Consensus 216 ~~~~~ 220 (350)
++.++
T Consensus 220 ~~~d~ 224 (372)
T 1k8k_C 220 VSHDS 224 (372)
T ss_dssp EETTT
T ss_pred EeCCC
Confidence 88775
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=205.67 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=157.0
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc----CCceEEEE---ee
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK----SSVTGLLT---IS 74 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~---~~ 74 (350)
+|+|++++|++|+.||.|++||+... ......+..|. ..+.+++| ++
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~--------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQK--------------------------DDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSC--------------------------SSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCC--------------------------CCcceeccccCCCCCCceEEEEEEeccC
Confidence 68999999999999999999999831 11344444443 37888885 34
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcC---CCcEEEEEccCCeEEEEeCCccccccccccccccc
Q 045370 75 GGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHP---GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
+++.++++++.||.|++||+++++......+...|.+++|+| ++.++++++.||.|++||++......... .
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~ 252 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA-----S 252 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE-----E
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee-----e
Confidence 678899999999999999999999888888999999999999 99999999999999999998654332111 1
Q ss_pred eeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCc-------------------eEEEEeccCCCceeEEEEEcc
Q 045370 152 SVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRR-------------------VSIRRFNHKKGVVTNLVVIRQ 209 (350)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~-------------------~~~~~~~~~~~~v~~l~~~~~ 209 (350)
..+.+|...|++++|+|++ +++++.||.|++||++++ +.+..+..|..+|++++|+|+
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD 332 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC
Confidence 1344899999999999987 899999999999999753 567778889999999999999
Q ss_pred CCeEE-eeecCccccccccCC
Q 045370 210 SSLLS-EVSNCQRKLKKDRMP 229 (350)
Q Consensus 210 ~~~l~-~~~~~~~~~~~~~~~ 229 (350)
+++|+ +++.| ..+.+|++.
T Consensus 333 ~~~l~~s~~~d-~~i~iw~~~ 352 (357)
T 3i2n_A 333 KRGLCVCSSFD-QTVRVLIVT 352 (357)
T ss_dssp STTEEEEEETT-SEEEEEEEC
T ss_pred CCeEEEEecCC-CcEEEEECC
Confidence 99998 45554 444455443
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=3.8e-27 Score=202.48 Aligned_cols=184 Identities=17% Similarity=0.260 Sum_probs=154.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee--ccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS--LEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|++++|++++ ||.|++||+.+.. .......+ ..|...|.+++|++ ++.
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~------------------------~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 110 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPG------------------------NKSPVSQLDCLNRDNYIRSCKLLP-DGC 110 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTT------------------------CCSCSEEEECSCTTSBEEEEEECT-TSS
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCC------------------------ceeeeecccccCCCCcEEEEEEcC-CCC
Confidence 57999999999999 9999999998311 01112222 37899999999976 778
Q ss_pred EEEEEeCCCcEEEEeCCCCc--eEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 79 FFVSSSLDATCKVWDLGSGI--LIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~--~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++++++.|+.|++||+.+++ .... ..|...+.+++|+|+++++++++.||.|++||++++ .....+.
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~----------~~~~~~~ 180 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----------TLVRQFQ 180 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------EEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------ceeeeee
Confidence 89999999999999999887 3333 347788999999999999999999999999999853 3344677
Q ss_pred ccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 156 GHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
.|...|.+++|+|++ +++++.||.|++||+++++.+..+. +...+.+++|+|+++++++++.++.
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCc
Confidence 899999999999998 9999999999999999999988876 6788999999999999998877653
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=4.8e-27 Score=202.33 Aligned_cols=189 Identities=20% Similarity=0.254 Sum_probs=160.4
Q ss_pred CeecCC-CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDD-GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~d-g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|+ +++|+|||.||+|+|||+.+... ....+...+.+|...|.+++|++ ++.+
T Consensus 44 v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~----------------------~~~~~~~~l~~h~~~V~~~~~s~-dg~~ 100 (340)
T 4aow_A 44 IATTPQFPDMILSASRDKTIIMWKLTRDET----------------------NYGIPQRALRGHSHFVSDVVISS-DGQF 100 (340)
T ss_dssp EEECTTCTTEEEEEETTSCEEEEEECCSSS----------------------CSEEEEEEECCCSSCEEEEEECT-TSSE
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECCCCCc----------------------ccceeeEEEeCCCCCEEEEEECC-CCCE
Confidence 589998 68999999999999999873110 01234566789999999999965 7889
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++|+.|+.|++|+.......... .+...+..+.+++++.+|++++.|+.+++||+.... .......+|.
T Consensus 101 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~---------~~~~~~~~~~ 171 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC---------KYTVQDESHS 171 (340)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE---------EEEECSSSCS
T ss_pred EEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc---------eEEEEecccc
Confidence 999999999999999988777664 466788899999999999999999999999987432 2223456789
Q ss_pred CceEEEEecCCe----EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 159 GSITALAFSASH----LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 159 ~~i~~~~~~~~~----l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
..+.+++|+++. +++++.|+.|++||+++++.+..+.+|.++|++++|+|++++|++++.|+.
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 999999999875 789999999999999999999999999999999999999999998887753
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1e-26 Score=199.87 Aligned_cols=181 Identities=19% Similarity=0.280 Sum_probs=162.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++++.||.|++||+. .......+..|...|.+++|++ ++.++
T Consensus 147 ~~~~~~~~~l~~~~~dg~v~~~d~~---------------------------~~~~~~~~~~~~~~i~~~~~~~-~~~~l 198 (337)
T 1gxr_A 147 LAISPDSKVCFSCCSDGNIAVWDLH---------------------------NQTLVRQFQGHTDGASCIDISN-DGTKL 198 (337)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCC---------------------------CCceeeeeecccCceEEEEECC-CCCEE
Confidence 4799999999999999999999998 4566667788999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
++++.|+.|++||+.+++.+..+.+...+.+++|+|++.++++++.||.|++||++... ...+..|...
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~~ 267 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-----------KYQLHLHESC 267 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-----------EEEECCCSSC
T ss_pred EEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-----------eEEEcCCccc
Confidence 99999999999999999999989999999999999999999999999999999998543 2256789999
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
|.+++|+|++ |++++.||.|++||+.+++.+.... |...+.+++|+|++++|++++.++.
T Consensus 268 v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSC
T ss_pred eeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecCCCe
Confidence 9999999998 9999999999999999998886654 7889999999999999998887753
No 58
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.5e-27 Score=212.58 Aligned_cols=205 Identities=17% Similarity=0.215 Sum_probs=160.1
Q ss_pred CeecCC-CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDD-GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~d-g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|+ +.+|++|+.||.|++||+........ ..........+.+|...|.+++|++.+..+
T Consensus 134 l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----------------~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----------------PSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----------------TTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred EEECCCCCcEEEEECCCCcEEEEECCCcccccC-----------------ccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 578997 68999999999999999983111000 000134566778999999999998755559
Q ss_pred EEEEeCCCcEEEEeCCCCce-------EEE-EecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCcccccccccccccc
Q 045370 80 FVSSSLDATCKVWDLGSGIL-------IQT-QVYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQ 150 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~-------~~~-~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 150 (350)
|++|+.||.|++||+..+.. ... ..|...|.+++|+| ++.+|++++.||.|++||++... ....
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-------~~~~ 269 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-------TSKP 269 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-------SSSC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-------CCcc
Confidence 99999999999999987321 222 35888999999999 77899999999999999999542 1234
Q ss_pred ceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCC-ceEEEEeccCCCceeEEEEEccCCe-EEeeecCcccccc
Q 045370 151 HSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTR-RVSIRRFNHKKGVVTNLVVIRQSSL-LSEVSNCQRKLKK 225 (350)
Q Consensus 151 ~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~~~~~~~~ 225 (350)
...+..|...|++++|+|++ +++|+.||.|++||+++ ..++..+..|...|.+++|+|+++. |++++.+ ..+.+
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-~~i~i 348 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHV 348 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-SCCEE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC-CcEEE
Confidence 44677899999999999987 88999999999999998 5678888889999999999999964 6656555 34445
Q ss_pred ccCCc
Q 045370 226 DRMPS 230 (350)
Q Consensus 226 ~~~~~ 230 (350)
|++..
T Consensus 349 wd~~~ 353 (430)
T 2xyi_A 349 WDLSK 353 (430)
T ss_dssp EEGGG
T ss_pred EeCCC
Confidence 54433
No 59
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-27 Score=224.37 Aligned_cols=228 Identities=18% Similarity=0.199 Sum_probs=177.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-CcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-TTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~ 79 (350)
++|+|+|++|++|+.||.|+|||+... .......+.+|.++|.+++|+++. +.+
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~-------------------------~~~~~~~l~~h~~~V~~l~~s~~~~~~~ 69 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGE-------------------------THKLIDTLTGHEGPVWRVDWAHPKFGTI 69 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCTTSCSE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCC-------------------------CCccceeccCCcCceEEEEecCCCCCCE
Confidence 579999999999999999999998721 234566778999999999997642 789
Q ss_pred EEEEeCCCcEEEEeCCCCc--eEEE-EecCCceeEEEEcCC--CcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 80 FVSSSLDATCKVWDLGSGI--LIQT-QVYPQAVTAIAFHPG--EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~--~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
+++|+.||.|++||+.++. .... ..|...|.+++|+|+ +..+++|+.||.|++||++.... .....+
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--------~~~~~~ 141 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--------TSPIII 141 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--------CCCEEE
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--------cceeEe
Confidence 9999999999999999986 3333 348899999999999 99999999999999999986422 223356
Q ss_pred eccCCceEEEEecCC-------------e--EEEEeCCCcEEEEECCCc----eEEEEeccCCCceeEEEEEcc---CCe
Q 045370 155 KGHNGSITALAFSAS-------------H--LISASEDKTVCLWDVTRR----VSIRRFNHKKGVVTNLVVIRQ---SSL 212 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~-------------~--l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~l~~~~~---~~~ 212 (350)
.+|...|.+++|+|. + +++|+.||.|++||++++ ..+..+.+|.++|++++|+|+ +.+
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE
Confidence 789999999999993 5 999999999999999876 667788899999999999999 899
Q ss_pred EEeeecCccccccccCCc--------------cccCCCCccccccceEEeeccccCCCCcccccccc
Q 045370 213 LSEVSNCQRKLKKDRMPS--------------LEKYPQLNSLSMEMVILLQSCFFNKDDQCSINIRR 265 (350)
Q Consensus 213 l~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 265 (350)
|++++.++.+ .+|+... ....+....+++++..++ .+..+|.+.++...
T Consensus 222 l~s~s~Dg~I-~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~---s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 222 LASVSQDRTC-IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA---LSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEESSSCE-EEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEE---EECSSSCEECCBCC
T ss_pred EEEEecCCEE-EEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEE---EEcCCCEEEEEecC
Confidence 9988877532 2332221 122233445555555544 23346777666544
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.9e-27 Score=206.54 Aligned_cols=188 Identities=18% Similarity=0.273 Sum_probs=158.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||.. ......+..|...|.+++|++ ++.+|
T Consensus 114 ~~~s~~~~~l~~~~~dg~i~i~~~~----------------------------~~~~~~~~~~~~~v~~~~~~~-~~~~l 164 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVENGELRLWNKT----------------------------GALLNVLNFHRAPIVSVKWNK-DGTHI 164 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT----------------------------SCEEEEECCCCSCEEEEEECT-TSSEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC----------------------------CCeeeeccCCCccEEEEEECC-CCCEE
Confidence 5799999999999999999999954 555666778888888888865 66788
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE---------------------------------------------------------
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ--------------------------------------------------------- 103 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~--------------------------------------------------------- 103 (350)
++++.|+.|++||+.+++.+..+
T Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 244 (425)
T 1r5m_A 165 ISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI 244 (425)
T ss_dssp EEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC
T ss_pred EEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec
Confidence 88888888999988776544321
Q ss_pred ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEE
Q 045370 104 VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCL 182 (350)
Q Consensus 104 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~i 182 (350)
.|...|.+++|+|++++|++++.||.|++||++.. .....+..|...|.+++|+|++ +++++.|+.|++
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----------~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i 314 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG----------NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRL 314 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB----------SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC----------ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEE
Confidence 25567899999999999999999999999999843 3444677899999999999998 999999999999
Q ss_pred EECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 183 WDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 183 wd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
||+++++.+..+..|..+|.+++|+|++++|++++.++ .+.+|++
T Consensus 315 ~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~~~ 359 (425)
T 1r5m_A 315 WSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG-QVNVYDL 359 (425)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS-CEEEEEC
T ss_pred EECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC-eEEEEEC
Confidence 99999999999999999999999999999999888764 3334433
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.1e-26 Score=206.29 Aligned_cols=215 Identities=16% Similarity=0.219 Sum_probs=163.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccc--------------cccccccEEEeeccccccceeeeccccCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHH--------------SDQLDQRLIEMELRSLRSLLHYSLEHKSS 66 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 66 (350)
|+|+|||++||+|+.||+|+|||+.+.........+. +...++.+...+.......+..+.+|...
T Consensus 153 v~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~ 232 (420)
T 4gga_A 153 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 232 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccc
Confidence 5899999999999999999999998654332221111 11223344444444445566778899999
Q ss_pred ceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCce-----EEEEecCCceeEEEEcCCCc-EEEE--EccCCeEEEEeCCcc
Q 045370 67 VTGLLTISGGTTFFVSSSLDATCKVWDLGSGIL-----IQTQVYPQAVTAIAFHPGEQ-LLFA--GSIDGRIFVSPLKFL 138 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~-~l~~--~~~dg~i~i~d~~~~ 138 (350)
+..+.+.+ ++.++++++.|+.|++|+..+++. .....|...|.+++|+|.+. .+++ |+.|+.|++||+.++
T Consensus 233 ~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 233 VCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 99998865 778999999999999999987653 22345888999999999654 5544 457999999999865
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe--EEEEe--CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISAS--EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 214 (350)
... ..+. +...+.++.|+|++ +++++ .|+.|+|||+.+++++.++.+|.+.|++++|+|+|++|+
T Consensus 312 ~~~----------~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 312 ACL----------SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp EEE----------EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred ccc----------eeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 432 2333 34578899999988 55543 799999999999999999999999999999999999999
Q ss_pred eeecCc--ccccccc
Q 045370 215 EVSNCQ--RKLKKDR 227 (350)
Q Consensus 215 ~~~~~~--~~~~~~~ 227 (350)
+++.|+ ++|++..
T Consensus 381 S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 381 SAAADETLRLWRCFE 395 (420)
T ss_dssp EEETTTEEEEECCSC
T ss_pred EEecCCeEEEEECCC
Confidence 888774 4444443
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=3.3e-27 Score=207.05 Aligned_cols=197 Identities=16% Similarity=0.141 Sum_probs=157.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.||.|++||+. ...+..+.+|...|.+++|++.+..++
T Consensus 169 ~~~~~~~~~l~~~~~d~~i~i~d~~----------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 169 VDVSVSRQMLATGDSTGRLLLLGLD----------------------------GHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETT----------------------------SCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEECCCCCEEEEECCCCCEEEEECC----------------------------CCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 4799999999999999999999986 455667788999999999987544499
Q ss_pred EEEeCCCcEEEEeCCC----CceEEEEecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCcccccccccccc-------
Q 045370 81 VSSSLDATCKVWDLGS----GILIQTQVYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGE------- 148 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------- 148 (350)
++|+.|+.|++||+.+ +.++..+.|...|.+++|+| ++.+|++++.|+.|++||++++..........
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL 300 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence 9999999999999998 67777788999999999999 99999999999999999999765433211110
Q ss_pred ccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc--CCCceeEEEEEccCCeEEeeecCcccccc
Q 045370 149 DQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH--KKGVVTNLVVIRQSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~~~~~~~~~~~~ 225 (350)
..+...-.....+..++++|++ + +|+.||.|++||+.+++.+..+.. |.+.+..++|+|++++|++++ | ..+.+
T Consensus 301 ~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d-~~i~i 377 (383)
T 3ei3_B 301 TPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-G-FNILI 377 (383)
T ss_dssp CCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-T-TEEEE
T ss_pred cceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-C-CcEEE
Confidence 0000001112455667778877 7 888999999999999999999976 457788889999999999886 4 44555
Q ss_pred ccC
Q 045370 226 DRM 228 (350)
Q Consensus 226 ~~~ 228 (350)
|++
T Consensus 378 w~~ 380 (383)
T 3ei3_B 378 WNR 380 (383)
T ss_dssp EEC
T ss_pred Eec
Confidence 544
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=3.3e-27 Score=208.49 Aligned_cols=199 Identities=17% Similarity=0.233 Sum_probs=159.2
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+| ++++|++|+.||+|+|||+.+..... ........+.+|...|.+++|++.+..+
T Consensus 87 ~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~--------------------~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL--------------------PLREPVITLEGHTKRVGIVAWHPTAQNV 146 (402)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEECCTTCCSS--------------------CBCSCSEEEECCSSCEEEEEECSSBTTE
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc--------------------ccCCceEEecCCCCeEEEEEECcCCCCE
Confidence 57999 99999999999999999998321100 0114566778999999999998755579
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEE---ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceee-e
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQ---VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL-K 155 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~ 155 (350)
|++|+.|+.|++||+.+++.+..+ .|...|.+++|+|++.+|++++.||.|++||++.+. ....+ .
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------~~~~~~~ 216 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT----------VVAEKDR 216 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE----------EEEEEEC
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc----------eeeeecc
Confidence 999999999999999999988887 388899999999999999999999999999998543 33345 5
Q ss_pred ccCCc-eEEEEecCCe--EEEE---eCCCcEEEEECCCceE-EEEec-cCCCceeEEEEEccCCeEEeeecCcccccccc
Q 045370 156 GHNGS-ITALAFSASH--LISA---SEDKTVCLWDVTRRVS-IRRFN-HKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDR 227 (350)
Q Consensus 156 ~~~~~-i~~~~~~~~~--l~s~---~~dg~v~iwd~~~~~~-~~~~~-~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~ 227 (350)
.|.+. +.++.|+|++ +++| +.|+.|++||++++.. +.... .|...+.+++|+|++++|++++..+..+.+|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d 296 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFE 296 (402)
T ss_dssp SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEE
T ss_pred CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEE
Confidence 67665 8999999999 7777 6899999999998654 32222 46778999999999999986665444555554
Q ss_pred CC
Q 045370 228 MP 229 (350)
Q Consensus 228 ~~ 229 (350)
+.
T Consensus 297 ~~ 298 (402)
T 2aq5_A 297 IT 298 (402)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 64
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-27 Score=227.62 Aligned_cols=189 Identities=14% Similarity=0.155 Sum_probs=157.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+|+|++||+|+.||+|+||+... ... .....|...|.+++|++ +.+|
T Consensus 23 lafspdg~~lAsgs~Dg~I~lw~~~~---------------------------~~~-~~~~~~~~~V~~l~fsp--g~~L 72 (902)
T 2oaj_A 23 AAFDFTQNLLAIATVTGEVHIYGQQQ---------------------------VEV-VIKLEDRSAIKEMRFVK--GIYL 72 (902)
T ss_dssp EEEETTTTEEEEEETTSEEEEECSTT---------------------------CEE-EEECSSCCCEEEEEEET--TTEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCC---------------------------cEE-EEEcCCCCCEEEEEEcC--CCEE
Confidence 58999999999999999999999872 222 22345788999999987 5589
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccc-eeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH-SVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (350)
++++.|++|++||+.+++.+..+.+...|++++|+|+++++++|+.||.|++||++............... ..+.+|.+
T Consensus 73 ~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp EEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred EEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 99999999999999999999888888999999999999999999999999999998765321000000000 24467999
Q ss_pred ceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccC------------------CCceeEEEEEccCCeEEeeec
Q 045370 160 SITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHK------------------KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 160 ~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~------------------~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.|++++|+|++ +++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++++.
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 99999999963 9999999999 9999999998888755 467999999999999998887
Q ss_pred Cc
Q 045370 219 CQ 220 (350)
Q Consensus 219 ~~ 220 (350)
|+
T Consensus 232 Dg 233 (902)
T 2oaj_A 232 DN 233 (902)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.4e-26 Score=204.26 Aligned_cols=197 Identities=25% Similarity=0.323 Sum_probs=157.8
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+| ++++|++|+.||.|++||+.+........... . .........+|...|.+++|++.++.+
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA------------V--CSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE------------E--EEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc------------c--ccccccccccCCCcEEEEEEccCCCcE
Confidence 57999 99999999999999999998422111000000 0 000001123699999999998867789
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCC---CcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPG---EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+++++.||.|++||+.+++....+.+...+.++.|+|. +.++++++.||.|++||++.+ .....+.+
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~----------~~~~~~~~ 184 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG----------SCSHILQG 184 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS----------CCCEEECC
T ss_pred EEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc----------ceeeeecC
Confidence 99999999999999999999999999999999999984 449999999999999999853 34457778
Q ss_pred cCCceEEEEecCCe---EEEEeCCCcEEEEECCCce-EEEEe---------------ccCCCceeEEEEEccCCeEEeee
Q 045370 157 HNGSITALAFSASH---LISASEDKTVCLWDVTRRV-SIRRF---------------NHKKGVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 157 ~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~-~~~~~---------------~~~~~~v~~l~~~~~~~~l~~~~ 217 (350)
|...|++++|+|++ +++|+.||.|++||++++. .+..+ ..|...|.+++|+|++++|++++
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 99999999999987 7899999999999998765 34443 46888999999999999999888
Q ss_pred cCcc
Q 045370 218 NCQR 221 (350)
Q Consensus 218 ~~~~ 221 (350)
.++.
T Consensus 265 ~dg~ 268 (408)
T 4a11_B 265 TDNR 268 (408)
T ss_dssp TTSC
T ss_pred CCCe
Confidence 7753
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.6e-27 Score=210.15 Aligned_cols=199 Identities=18% Similarity=0.136 Sum_probs=158.4
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
.|+|++++|++|+.||.|++||+. .......+.+|...|.+++|++ ++.+|+
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 155 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSN---------------------------FNLQREIDQAHVSEITKLKFFP-SGEALI 155 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTT---------------------------SCEEEEETTSSSSCEEEEEECT-TSSEEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCC---------------------------CcceeeecccccCccEEEEECC-CCCEEE
Confidence 589999999999999999999998 4555666679999999999976 678999
Q ss_pred EEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccc---ccce-----
Q 045370 82 SSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGE---DQHS----- 152 (350)
Q Consensus 82 s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~----- 152 (350)
+|+.|+.|++||+.+++.+..+. |...|.+++|+|++.+|++++.||.|++||++++.......... ..+.
T Consensus 156 s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 99999999999999998887765 88999999999999999999999999999998665432211100 0000
Q ss_pred ------eeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec-cCCCceeEEEEEccCC-eEEeeecCccc
Q 045370 153 ------VLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN-HKKGVVTNLVVIRQSS-LLSEVSNCQRK 222 (350)
Q Consensus 153 ------~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~~-~l~~~~~~~~~ 222 (350)
....+...+.+++|+|++ +++|+.||.|++||+++++.+..+. .|...|.+++|+|+++ +|++++.++ .
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-~ 314 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-M 314 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-E
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-e
Confidence 011133555666678888 9999999999999999998877775 5788999999999999 888777664 3
Q ss_pred cccccCC
Q 045370 223 LKKDRMP 229 (350)
Q Consensus 223 ~~~~~~~ 229 (350)
+.+|++.
T Consensus 315 i~vwd~~ 321 (420)
T 3vl1_A 315 LAQWDLR 321 (420)
T ss_dssp EEEEETT
T ss_pred EEEEEcC
Confidence 3444443
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-27 Score=211.74 Aligned_cols=188 Identities=13% Similarity=0.174 Sum_probs=156.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++|+.||.|++||+.... ........+.+|...|.+++|++.++.+|
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~-----------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEAN-----------------------NAINSMARFSNHSSSVKTVKFNAKQDNVL 129 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTT-----------------------SCCCEEEECCCSSSCCCEEEECSSSTTBE
T ss_pred EEECCCCCeEEEEccCCeEEEeeccccc-----------------------ccccchhhccCCccceEEEEEcCCCCCEE
Confidence 5799999999999999999999998210 01235667788999999999987657899
Q ss_pred EEEeCCCcEEEEeCCCCc------eEEE----EecCCceeEEEEcCC-CcEEEEEccCCeEEEEeCCccccccccccccc
Q 045370 81 VSSSLDATCKVWDLGSGI------LIQT----QVYPQAVTAIAFHPG-EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~------~~~~----~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 149 (350)
++++.|+.|++||+.++. .... ..|...|.+++|+|+ +.+|++++.||.|++||++.....
T Consensus 130 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-------- 201 (416)
T 2pm9_A 130 ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV-------- 201 (416)
T ss_dssp EEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE--------
T ss_pred EEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc--------
Confidence 999999999999999876 3322 357889999999998 789999999999999999864432
Q ss_pred cceeeecc------CCceEEEEecCCe---EEEEeCCC---cEEEEECCCc-eEEEEec-cCCCceeEEEEEc-cCCeEE
Q 045370 150 QHSVLKGH------NGSITALAFSASH---LISASEDK---TVCLWDVTRR-VSIRRFN-HKKGVVTNLVVIR-QSSLLS 214 (350)
Q Consensus 150 ~~~~~~~~------~~~i~~~~~~~~~---l~s~~~dg---~v~iwd~~~~-~~~~~~~-~~~~~v~~l~~~~-~~~~l~ 214 (350)
..+..| ...|.+++|+|++ +++++.|+ .|++||++++ .++..+. +|...|.+++|+| ++++|+
T Consensus 202 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 202 --IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp --EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE
T ss_pred --eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE
Confidence 233333 7899999999986 88999998 9999999986 6777777 8999999999999 899999
Q ss_pred eeecCcc
Q 045370 215 EVSNCQR 221 (350)
Q Consensus 215 ~~~~~~~ 221 (350)
+++.++.
T Consensus 280 s~~~dg~ 286 (416)
T 2pm9_A 280 SSGRDNT 286 (416)
T ss_dssp EEESSSE
T ss_pred EEeCCCC
Confidence 8887653
No 68
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=3.7e-26 Score=196.75 Aligned_cols=215 Identities=20% Similarity=0.245 Sum_probs=166.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccc----------------cccccccEEEeeccccccceeeecccc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHH----------------SDQLDQRLIEMELRSLRSLLHYSLEHK 64 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~h~ 64 (350)
++|+|+|++|++|+.|+.|++|+.............. +...++.+..++............+|.
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~ 171 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHS 171 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCS
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecccc
Confidence 4799999999999999999999988643322211111 111233333344333344455567899
Q ss_pred CCceEEEEeeCC-CcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccc
Q 045370 65 SSVTGLLTISGG-TTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 65 ~~v~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
..+..++|.+.. ..++++++.|+.|++||+.+++....+ .|...|++++|+|++++|++|+.||.|++||++...
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--- 248 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--- 248 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE---
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc---
Confidence 999999997643 357889999999999999999888775 488999999999999999999999999999998543
Q ss_pred ccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEec---------cCCCceeEEEEEccCCe
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFN---------HKKGVVTNLVVIRQSSL 212 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~---------~~~~~v~~l~~~~~~~~ 212 (350)
.+..+. +...|.++.|+|++ +++++.|+.|++||++++..+..+. .|...|++++|+|++++
T Consensus 249 -------~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 249 -------HLYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp -------EEEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred -------eeeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence 223443 44689999999999 8889999999999999988776653 57889999999999999
Q ss_pred EEeeecCcccccccc
Q 045370 213 LSEVSNCQRKLKKDR 227 (350)
Q Consensus 213 l~~~~~~~~~~~~~~ 227 (350)
|++++.|+. +++|+
T Consensus 321 l~sgs~Dg~-v~iW~ 334 (340)
T 4aow_A 321 LFAGYTDNL-VRVWQ 334 (340)
T ss_dssp EEEEETTSC-EEEEE
T ss_pred EEEEeCCCE-EEEEe
Confidence 998887753 34443
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=9.2e-27 Score=207.42 Aligned_cols=197 Identities=18% Similarity=0.285 Sum_probs=160.1
Q ss_pred CeecCCCC-EEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGF-LLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|++. +|++|+.||.|++||+........ .......+.+|...|.+++|++.++.+
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~ 246 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHR--------------------VIDAKNIFTGHTAVVEDVAWHLLHESL 246 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGG--------------------EEECSEEECCCSSCEEEEEECSSCTTE
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc--------------------eeccceeecCCCCCEeeeEEeCCCCCE
Confidence 57999998 999999999999999983111000 011234566899999999998877889
Q ss_pred EEEEeCCCcEEEEeCCCC---ceEEEE-ecCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 80 FVSSSLDATCKVWDLGSG---ILIQTQ-VYPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~---~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
|++++.||.|++||++++ .....+ .|...|++++|+|++. ++++|+.||.|++||++.. ..++..+
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~---------~~~~~~~ 317 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---------KLKLHSF 317 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT---------TSCSEEE
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC---------CCCeEEe
Confidence 999999999999999987 445444 6889999999999887 6889999999999999852 3345578
Q ss_pred eccCCceEEEEecCCe---EEEEeCCCcEEEEECCC--------------ceEEEEeccCCCceeEEEEEccCC-eEEee
Q 045370 155 KGHNGSITALAFSASH---LISASEDKTVCLWDVTR--------------RVSIRRFNHKKGVVTNLVVIRQSS-LLSEV 216 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~--------------~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~ 216 (350)
..|...|++++|+|++ |++++.||.|++||+.. .+.+..+.+|...|.+++|+|+++ +|+++
T Consensus 318 ~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 318 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 8899999999999987 89999999999999987 367778888999999999999999 66666
Q ss_pred ecCcccccccc
Q 045370 217 SNCQRKLKKDR 227 (350)
Q Consensus 217 ~~~~~~~~~~~ 227 (350)
+.+ ..+.+|.
T Consensus 398 s~d-g~i~iw~ 407 (430)
T 2xyi_A 398 SED-NIMQVWQ 407 (430)
T ss_dssp ETT-SEEEEEE
T ss_pred ECC-CCEEEeE
Confidence 655 4444443
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=9.5e-27 Score=205.53 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=157.0
Q ss_pred eecCCCCE-EEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 2 VFSDDGFL-LISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg~~-l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
+++|+... +++|+.||.|+||++.... ........+.+|...|.+++|++.++.+|
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~-----------------------~~~~~~~~~~~h~~~V~~~~~~p~~~~~l 97 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTG-----------------------RVDKNVPLVCGHTAPVLDIAWCPHNDNVI 97 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCE-----------------------ECCTTCCCBCCCSSCEEEEEECTTCTTEE
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCC-----------------------CCCCCCceEecCCCCEEEEEeCCCCCCEE
Confidence 56666643 4457899999999987310 01133455678999999999977577899
Q ss_pred EEEeCCCcEEEEeCCCC-------ceEEEE-ecCCceeEEEEcCCC-cEEEEEccCCeEEEEeCCccccccccccccccc
Q 045370 81 VSSSLDATCKVWDLGSG-------ILIQTQ-VYPQAVTAIAFHPGE-QLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
++|+.||.|++||+.++ ..+..+ .|...|.+++|+|++ ++|++++.||.|++||++++. ..
T Consensus 98 ~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------~~ 167 (402)
T 2aq5_A 98 ASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----------AV 167 (402)
T ss_dssp EEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----------EE
T ss_pred EEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----------cc
Confidence 99999999999999987 444444 589999999999998 699999999999999998543 33
Q ss_pred eee--eccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe-ccCCCc-eeEEEEEccCCeEEeee--cCcccc
Q 045370 152 SVL--KGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF-NHKKGV-VTNLVVIRQSSLLSEVS--NCQRKL 223 (350)
Q Consensus 152 ~~~--~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~-v~~l~~~~~~~~l~~~~--~~~~~~ 223 (350)
..+ .+|...|++++|+|++ |++++.||.|++||+++++.+..+ ..|.+. +.+++|+|++++|+++. ..+..+
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQV 247 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEE
T ss_pred EEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceE
Confidence 355 6799999999999998 999999999999999999999998 677775 89999999999999873 334444
Q ss_pred ccccCC
Q 045370 224 KKDRMP 229 (350)
Q Consensus 224 ~~~~~~ 229 (350)
.+|+..
T Consensus 248 ~iwd~~ 253 (402)
T 2aq5_A 248 ALWDTK 253 (402)
T ss_dssp EEEETT
T ss_pred EEEcCc
Confidence 555443
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=7.2e-27 Score=224.26 Aligned_cols=184 Identities=15% Similarity=0.205 Sum_probs=162.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|||+|++|++|+.||.|+|||+. .+.....+.+|..+|.+++|+| ++.+|
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~---------------------------~~~~~~~~~~~~~~v~~~~~s~-~~~~l 70 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYE---------------------------TQVEVRSIQVTETPVRAGKFIA-RKNWI 70 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETT---------------------------TTEEEEEEECCSSCEEEEEEEG-GGTEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECC---------------------------CCceEEEEecCCCcEEEEEEeC-CCCEE
Confidence 5899999999999999999999998 4666777889999999999977 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++|+.||.|++||+.+++.+..+. |...|.+++|+|++.+|++++.||.|++||+... ......+.+|..
T Consensus 71 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~---------~~~~~~~~~~~~ 141 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN---------WALEQTFEGHEH 141 (814)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT---------SEEEEEEECCSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC---------ceEEEEEcCCCC
Confidence 999999999999999999888765 8899999999999999999999999999999853 233447778999
Q ss_pred ceEEEEecC-Ce--EEEEeCCCcEEEEECCCceEEEEeccCC-CceeEEEEEc--cCCeEEeeecCcc
Q 045370 160 SITALAFSA-SH--LISASEDKTVCLWDVTRRVSIRRFNHKK-GVVTNLVVIR--QSSLLSEVSNCQR 221 (350)
Q Consensus 160 ~i~~~~~~~-~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~l~~~~--~~~~l~~~~~~~~ 221 (350)
.|.+++|+| ++ +++++.||.|++||+.++.....+..+. ..+.+++|+| ++.+|++++.++.
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 209 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE
Confidence 999999999 66 9999999999999999888777776544 8899999999 8999998877653
No 72
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=3.1e-26 Score=195.34 Aligned_cols=208 Identities=14% Similarity=0.186 Sum_probs=158.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCcccccccccccccc--------------ccccccEEEeeccccccceeeeccccCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHS--------------DQLDQRLIEMELRSLRSLLHYSLEHKSS 66 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 66 (350)
|+|+|+|++|++|+.||+|++||+++.........+.. ...++.+..............+.+|...
T Consensus 73 v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence 57999999999999999999999987543322211111 1112233333333344556677899999
Q ss_pred ceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceE-----EEEecCCceeEEEEcCCCcE---EEEEccCCeEEEEeCCcc
Q 045370 67 VTGLLTISGGTTFFVSSSLDATCKVWDLGSGILI-----QTQVYPQAVTAIAFHPGEQL---LFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~ 138 (350)
+..+.+.+ .+.++++++.|++|++||+.+++.. ....+...|.++.++|++.. +++++.++.|++||....
T Consensus 153 ~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~ 231 (318)
T 4ggc_A 153 VCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 231 (318)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC
T ss_pred eEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc
Confidence 99998865 6788999999999999999886532 22347788999999997653 346678899999998853
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe--EEE--EeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LIS--ASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 214 (350)
... ....+...+..+.|+|.+ +++ |+.|+.|++||+++++++.++.+|.++|++++|+|++++|+
T Consensus 232 ~~~-----------~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 232 ACL-----------SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA 300 (318)
T ss_dssp CEE-----------EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred ccc-----------ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 321 334567789999999987 444 44899999999999999999999999999999999999999
Q ss_pred eeecCc
Q 045370 215 EVSNCQ 220 (350)
Q Consensus 215 ~~~~~~ 220 (350)
+++.|+
T Consensus 301 S~s~D~ 306 (318)
T 4ggc_A 301 SAAADE 306 (318)
T ss_dssp EEETTT
T ss_pred EEecCC
Confidence 888774
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=1.7e-27 Score=203.37 Aligned_cols=194 Identities=16% Similarity=0.158 Sum_probs=151.5
Q ss_pred CeecC--CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-C
Q 045370 1 MVFSD--DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-T 77 (350)
Q Consensus 1 i~~s~--dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 77 (350)
|+|+| ++++|++|+.|++|++||+++. .......+.+|...|.+++|+|.. +
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~-------------------------~~~~~~~~~~h~~~V~~v~~~p~~~g 117 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENG-------------------------TWEKSHEHAGHDSSVNSVCWAPHDYG 117 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSS-------------------------CCCEEEEECCCSSCCCEEEECCTTTC
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCC-------------------------cceEEEEccCCCCceEEEEECCCCCC
Confidence 46876 4899999999999999999721 012345567899999999998753 6
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEE---E-EecCCceeEEEEcCC-----------------CcEEEEEccCCeEEEEeCC
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQ---T-QVYPQAVTAIAFHPG-----------------EQLLFAGSIDGRIFVSPLK 136 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~---~-~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~ 136 (350)
.+|++|+.|++|++||+..+.... . ..|...+.+++|+|+ +.+|++|+.|+.|++||++
T Consensus 118 ~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 118 LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE 197 (316)
T ss_dssp SCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC
T ss_pred cEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC
Confidence 789999999999999998764321 1 247788999999997 4689999999999999986
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCe------EEEEeCCCcEEEEECCCc---e-EEEEeccCCCceeEEEE
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH------LISASEDKTVCLWDVTRR---V-SIRRFNHKKGVVTNLVV 206 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------l~s~~~dg~v~iwd~~~~---~-~~~~~~~~~~~v~~l~~ 206 (350)
... .......+.+|...|.+++|+|++ |++|+.|++|++||+.+. . ....+..|...|.+++|
T Consensus 198 ~~~-------~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~ 270 (316)
T 3bg1_A 198 EDG-------QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSW 270 (316)
T ss_dssp TTS-------CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEE
T ss_pred CCC-------ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEE
Confidence 321 012334678999999999999973 999999999999999762 1 12334568889999999
Q ss_pred EccCCeEEeeecCcccccccc
Q 045370 207 IRQSSLLSEVSNCQRKLKKDR 227 (350)
Q Consensus 207 ~~~~~~l~~~~~~~~~~~~~~ 227 (350)
+|++++|++++.|+. +++|+
T Consensus 271 sp~g~~las~~~D~~-v~lw~ 290 (316)
T 3bg1_A 271 SITANILAVSGGDNK-VTLWK 290 (316)
T ss_dssp CTTTCCEEEEESSSC-EEEEE
T ss_pred cCCCCEEEEEcCCCe-EEEEE
Confidence 999999998887653 33443
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=200.17 Aligned_cols=217 Identities=14% Similarity=0.092 Sum_probs=153.1
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccc-----------cccccccccEEEeecc--------cccc-ceeeec
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELM-----------HHSDQLDQRLIEMELR--------SLRS-LLHYSL 61 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--------~~~~-~~~~~~ 61 (350)
.+.+++.+|++|+.||+|++||+.++........ -.+...++.+..++.. .... ......
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 3567889999999999999999986432211100 0111223333322211 1122 222334
Q ss_pred cccCCceEEEEeeC-CCcEEEEEeCCCcEEEEeCCCCceEEEE--ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 62 EHKSSVTGLLTISG-GTTFFVSSSLDATCKVWDLGSGILIQTQ--VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 62 ~h~~~v~~~~~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
+|.+.|.+++|+|. ++.++++|+.||+|++||+.+++..... .+...+.+++|+|++.+|++|+.||.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 67789999999651 5688999999999999999999887654 35567999999999999999999999999999964
Q ss_pred ccccccccccccceeeec-cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEecc---CCCcee--EEEEEccC
Q 045370 139 LLEDHFIVGEDQHSVLKG-HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH---KKGVVT--NLVVIRQS 210 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~--~l~~~~~~ 210 (350)
... ...+.. |..+|++++|+|++ |++++ |+.|++||+++++.+..+.. |...+. +++|+|++
T Consensus 203 ~~~---------~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 203 DQA---------SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp TSC---------CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred CCC---------ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 321 135566 99999999999998 88888 55999999999877655543 444444 59999999
Q ss_pred CeEEeeecCccccccccC
Q 045370 211 SLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~ 228 (350)
++|++++.++..+.+|.+
T Consensus 273 ~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp SEEEEEETTTTEEEEEEE
T ss_pred CEEEEecCCCCcEEEEEE
Confidence 999987763434445433
No 75
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.8e-27 Score=209.39 Aligned_cols=198 Identities=8% Similarity=0.008 Sum_probs=143.2
Q ss_pred CeecC--------CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEE
Q 045370 1 MVFSD--------DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLT 72 (350)
Q Consensus 1 i~~s~--------dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 72 (350)
|+|+| ||++||||+.|++|+|||+. ..........|..+|.+++|
T Consensus 142 v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~---------------------------~~~~~~~~~~~~~~v~~v~~ 194 (393)
T 4gq1_A 142 IDIADVYSADNRLAEQVIASVGDDCTLIIWRLT---------------------------DEGPILAGYPLSSPGISVQF 194 (393)
T ss_dssp EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE---------------------------TTEEEEEEEECSSCEEEEEE
T ss_pred EEEccccccccCCCCCEEEEEECCCeEEEEECC---------------------------CCceeeeecCCCCCcEEEEE
Confidence 46776 89999999999999999997 35566677889999999999
Q ss_pred eeCCCcEEEEEeCCCcEEEEeCCCCceEEE--------------------------EecCCceeEEEEc-CCCcEEEEEc
Q 045370 73 ISGGTTFFVSSSLDATCKVWDLGSGILIQT--------------------------QVYPQAVTAIAFH-PGEQLLFAGS 125 (350)
Q Consensus 73 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~--------------------------~~~~~~v~~~~~~-~~~~~l~~~~ 125 (350)
+|.+..+|++|+.|++|++||+.+++.... ..|...+.++.|. |++..|++++
T Consensus 195 ~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s 274 (393)
T 4gq1_A 195 RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC 274 (393)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC
T ss_pred CCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe
Confidence 886667899999999999999988754332 1245678889987 7999999999
Q ss_pred cCCeEEEEeCCcccccccccccc---------ccceeeeccCCceEEEEecCC--e--EEEEeCCCcEEEEECCCceEEE
Q 045370 126 IDGRIFVSPLKFLLLEDHFIVGE---------DQHSVLKGHNGSITALAFSAS--H--LISASEDKTVCLWDVTRRVSIR 192 (350)
Q Consensus 126 ~dg~i~i~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~--~--l~s~~~dg~v~iwd~~~~~~~~ 192 (350)
.|+.+++||+............. ........+.. .....++|. + +++|+.||.|++||+.+++.+.
T Consensus 275 ~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 275 KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp TTSEEEEEEC-------------------CCSCSEEEECSSCC-SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 99999999998654332111000 00111111222 222334442 2 6778899999999999998888
Q ss_pred EeccCCCceeEEEEEccCCeEEeeecCcc-ccccc
Q 045370 193 RFNHKKGVVTNLVVIRQSSLLSEVSNCQR-KLKKD 226 (350)
Q Consensus 193 ~~~~~~~~v~~l~~~~~~~~l~~~~~~~~-~~~~~ 226 (350)
.+..|..+|.+++|+|+|++|++++.++. +|+++
T Consensus 354 ~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 354 IPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 88888999999999999999999987753 34443
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-26 Score=205.00 Aligned_cols=213 Identities=15% Similarity=0.190 Sum_probs=156.3
Q ss_pred CeecCCCC-EEEEEeCCCcEEEEeC----ccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC
Q 045370 1 MVFSDDGF-LLISGSDDGMICVWSM----TRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~-~l~sg~~dg~i~vwd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 75 (350)
++|+|+|+ +|++|+.||.|++||+ .++....... ....+ ...........+|...|.+++|++
T Consensus 51 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~- 118 (425)
T 1r5m_A 51 STWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLT---------IIAEL--RHPFALSASSGKTTNQVTCLAWSH- 118 (425)
T ss_dssp EEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEE---------EEEEE--ECCCCCC------CBCEEEEEECT-
T ss_pred EEECCCCCcEEEEecCCceEEEEEEecccCCcccccccc---------ccccc--cccccccccccCCCCceEEEEEcC-
Confidence 57999999 9999999999999999 5321000000 00000 000000011234788999999966
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc--------
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV-------- 146 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------- 146 (350)
++.+|++|+.||.|++|| .++..+..+ .|...|.+++|+|++++|++++.||.|++||+.++........
T Consensus 119 ~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 778999999999999999 556666655 4889999999999999999999999999999987653321110
Q ss_pred --------------------------------------ccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECC
Q 045370 147 --------------------------------------GEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVT 186 (350)
Q Consensus 147 --------------------------------------~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~ 186 (350)
.......+..|...|.+++|+|++ |++++.||.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 112334566889999999999998 9999999999999999
Q ss_pred CceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 187 RRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 187 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+++.+..+..|...|.+++|+|++ ++++++.++ .+.+|++
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~-~i~i~d~ 317 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDG-SVRLWSL 317 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTS-EEEEEET
T ss_pred CCccceEecCCCccEEEEEECCCC-EEEEEeCCC-cEEEEEC
Confidence 999999998899999999999999 777777664 3344433
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=4.1e-27 Score=207.26 Aligned_cols=181 Identities=17% Similarity=0.164 Sum_probs=153.8
Q ss_pred CeecCC----C---CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccc-----eeeeccc-----
Q 045370 1 MVFSDD----G---FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSL-----LHYSLEH----- 63 (350)
Q Consensus 1 i~~s~d----g---~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~h----- 63 (350)
++|+|+ | ++|++|+.||.|++||+.+ ... ...+..|
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~---------------------------~~~~~~~~~~~~~~~~~~~~ 120 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITR---------------------------EDETKKVIFEKLDLLDSDMK 120 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE---------------------------CTTTCCEEEEEECCSCTTGG
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccC---------------------------CcccccccceeecccccccC
Confidence 468888 9 9999999999999999983 333 5666777
Q ss_pred cCCceEEEEe----eCCCcE-EEEEeCCCcEEEEeCCC------CceEE-----EEe--------cCCceeEEEEcCCCc
Q 045370 64 KSSVTGLLTI----SGGTTF-FVSSSLDATCKVWDLGS------GILIQ-----TQV--------YPQAVTAIAFHPGEQ 119 (350)
Q Consensus 64 ~~~v~~~~~~----~~~~~~-l~s~~~d~~v~vwd~~~------~~~~~-----~~~--------~~~~v~~~~~~~~~~ 119 (350)
...|.+++|+ + ++.+ |++++.||.|++||+.+ +..+. .+. |...+.+++|+|++
T Consensus 121 ~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 198 (397)
T 1sq9_A 121 KHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 198 (397)
T ss_dssp GSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred CCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-
Confidence 5999999997 5 6677 99999999999999998 55544 442 67889999999999
Q ss_pred EEEEEccCCeEEEEeCCccccccccccccccceeeec---c---CCceEEEEecCCe--EEEEeCC---CcEEEEECCCc
Q 045370 120 LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG---H---NGSITALAFSASH--LISASED---KTVCLWDVTRR 188 (350)
Q Consensus 120 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~~~~~~~~--l~s~~~d---g~v~iwd~~~~ 188 (350)
++++++.||.|++||++.. .....+.. | ...|.+++|+|++ |++++.| |.|++||++++
T Consensus 199 ~l~~~~~dg~i~i~d~~~~----------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL----------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EEEEECTTSEEEEEETTTT----------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred eEEEEeCCCcEEEEECCCC----------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9999999999999999853 33446666 8 8999999999998 9999999 99999999999
Q ss_pred eEEEEecc-------------CCCceeEEEEEccCCeEEeeecCc
Q 045370 189 VSIRRFNH-------------KKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 189 ~~~~~~~~-------------~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+.+..+.. |...|.+++|+|++++|++++.++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 99999988 999999999999999999888765
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.2e-26 Score=192.95 Aligned_cols=211 Identities=18% Similarity=0.207 Sum_probs=166.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCcccccc--ccccccccc---------------cccccEEEeeccccccceeeeccc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQ--TSELMHHSD---------------QLDQRLIEMELRSLRSLLHYSLEH 63 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~--~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~h 63 (350)
++|+|++++|++|+.||.|++|++...... ......+.. ..++.+..++ .......+..|
T Consensus 65 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~ 141 (313)
T 3odt_A 65 VCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK---EGSLVYNLQAH 141 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE---TTEEEEEEECC
T ss_pred EEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc---CCcEEEecccC
Confidence 579999999999999999999998754311 111111111 1123333333 34556667889
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
...+.++.|.+.++.++++++.|+.|++||. +.....+. +...+.+++|+|++. +++++.||.|++||+++
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~---- 214 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT---- 214 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT----
T ss_pred CCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc----
Confidence 9999999999988899999999999999993 44444443 888999999999998 89999999999999984
Q ss_pred cccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.+....+.+|...|++++|+|++ +++++.||.|++||+++++.+..+..|..+|.+++|+|++++++ ++.++
T Consensus 215 ------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~dg 287 (313)
T 3odt_A 215 ------GDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIV-GSSDN 287 (313)
T ss_dssp ------CCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEE-EETTS
T ss_pred ------hhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEE-EeCCC
Confidence 34455778899999999999998 99999999999999999999999999999999999999999554 55543
Q ss_pred cccccccCC
Q 045370 221 RKLKKDRMP 229 (350)
Q Consensus 221 ~~~~~~~~~ 229 (350)
.+.+|++.
T Consensus 288 -~i~iw~~~ 295 (313)
T 3odt_A 288 -LVRIFSQE 295 (313)
T ss_dssp -CEEEEESC
T ss_pred -cEEEEeCC
Confidence 44455443
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=3e-26 Score=201.69 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=154.3
Q ss_pred Ceec----CCCCE-EEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccccee-----ee-------ccc
Q 045370 1 MVFS----DDGFL-LISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-----YS-------LEH 63 (350)
Q Consensus 1 i~~s----~dg~~-l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------~~h 63 (350)
++|+ |++++ |++|+.||.|++||+....... ....+. .+ ..|
T Consensus 127 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 127 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES---------------------NSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp EEEECCC----CEEEEEEETTSCEEEEEEESSSSHH---------------------HHTTTCCCCEEEEEEEECCSSSS
T ss_pred EEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc---------------------ccceeeccCcceeeeeeccccCC
Confidence 4688 99999 9999999999999998310000 011111 33 458
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe----c---CCceeEEEEcCCCcEEEEEccC---CeEEEE
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV----Y---PQAVTAIAFHPGEQLLFAGSID---GRIFVS 133 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~----~---~~~v~~~~~~~~~~~l~~~~~d---g~i~i~ 133 (350)
...|.+++|++ ++ ++++++.|+.|++||+.+++.+..+. | ...|.+++|+|++.+|++++.| |.|++|
T Consensus 186 ~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 186 SQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp CCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 99999999977 55 99999999999999999999888866 5 8899999999999999999999 999999
Q ss_pred eCCccccccccccccccceeeec-------------cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec---
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLKG-------------HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN--- 195 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~--- 195 (350)
|++++. .+..+.+ |...|.+++|+|++ |++++.||.|++||+++++.+..+.
T Consensus 264 d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 333 (397)
T 1sq9_A 264 ETEFGE----------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHC 333 (397)
T ss_dssp ETTTCC----------EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCG
T ss_pred ECCCCc----------ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEeccc
Confidence 998543 3345556 89999999999998 9999999999999999999999998
Q ss_pred ---cC---------------CCceeEEEEEccC----------CeEEeeecCcc
Q 045370 196 ---HK---------------KGVVTNLVVIRQS----------SLLSEVSNCQR 221 (350)
Q Consensus 196 ---~~---------------~~~v~~l~~~~~~----------~~l~~~~~~~~ 221 (350)
.| ..+|.+++|+|++ ++|++++.++.
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred CcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc
Confidence 77 8999999999998 78887777653
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=1.4e-26 Score=201.81 Aligned_cols=188 Identities=18% Similarity=0.188 Sum_probs=156.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccc--ceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRS--LLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|++++|++|+.||.|++||+.+ .. .......|...|.+++|++ ++.
T Consensus 58 ~~~~~~~~~l~~~~~dg~i~vwd~~~---------------------------~~~~~~~~~~~~~~~v~~~~~~~-~~~ 109 (372)
T 1k8k_C 58 VDWAPDSNRIVTCGTDRNAYVWTLKG---------------------------RTWKPTLVILRINRAARCVRWAP-NEK 109 (372)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEET---------------------------TEEEEEEECCCCSSCEEEEEECT-TSS
T ss_pred EEEeCCCCEEEEEcCCCeEEEEECCC---------------------------CeeeeeEEeecCCCceeEEEECC-CCC
Confidence 57999999999999999999999972 22 2233467899999999976 678
Q ss_pred EEEEEeCCCcEEEEeCCCCce---EEEE--ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccc--------cc
Q 045370 79 FFVSSSLDATCKVWDLGSGIL---IQTQ--VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDH--------FI 145 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--------~~ 145 (350)
++++++.|+.|++||+..+.. ...+ .|...|.+++|+|++.+|++++.||.|++||++....... ..
T Consensus 110 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (372)
T 1k8k_C 110 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 189 (372)
T ss_dssp EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCC
T ss_pred EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccccccc
Confidence 999999999999999998763 2222 3678999999999999999999999999999763321110 01
Q ss_pred cccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 146 VGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
........+..|...|.+++|+|++ |++++.||.|++||+++++.+..+..|..+|.+++|+|++.+++++
T Consensus 190 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 190 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp CTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred chhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 1234455677899999999999998 9999999999999999999999999999999999999999999876
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-27 Score=213.14 Aligned_cols=191 Identities=12% Similarity=0.020 Sum_probs=136.7
Q ss_pred cCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-----CCc
Q 045370 4 SDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG-----GTT 78 (350)
Q Consensus 4 s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~ 78 (350)
+|+++.|++++.|++|+|||+.+... .......+.+|.+.|.+++|+|. ++.
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~-----------------------~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~ 226 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTL-----------------------HCVKVQTIVHSFGEVWDLKWHEGCHAPHLVG 226 (524)
T ss_dssp ------------CEEEEEEEEETTTC-----------------------CEEEEEEEEECCCSEEEEEECSSCCCSSSSC
T ss_pred chhhhhhccCCCCceEEEEEccCCCC-----------------------CceEEEEEEecCCcEEEEEECCCCCCCCCCc
Confidence 34555566677899999999873100 00012335667899999999874 357
Q ss_pred EEEEEeCCCcEEEEeCCCCceE-----------EE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 79 FFVSSSLDATCKVWDLGSGILI-----------QT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~-----------~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
+|++++.||+|++||+..+... .. ..|...|.+++|+++ ..|++|+.||.|++||++.+
T Consensus 227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~-------- 297 (524)
T 2j04_B 227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDP-------- 297 (524)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBC--------
T ss_pred eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCC--------
Confidence 9999999999999999876421 12 247789999999986 48999999999999999853
Q ss_pred ccccceeeeccCCceEEE--EecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCC--ceeEEEEEccCCeEEeeecC
Q 045370 147 GEDQHSVLKGHNGSITAL--AFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKG--VVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~--~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~~~~~~ 219 (350)
..+...+.+|...|+++ .|+|++ |++|+.|++|+|||+++++.+..+.+|.. .|.+++|+|+++.+++++.+
T Consensus 298 -~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d 376 (524)
T 2j04_B 298 -EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA 376 (524)
T ss_dssp -SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSS
T ss_pred -CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCC
Confidence 12334678999999999 577763 89999999999999999887766665543 58899999999998877766
Q ss_pred ccccccccC
Q 045370 220 QRKLKKDRM 228 (350)
Q Consensus 220 ~~~~~~~~~ 228 (350)
. .+++|+.
T Consensus 377 ~-tv~lwd~ 384 (524)
T 2j04_B 377 S-SLRAVPS 384 (524)
T ss_dssp S-EEEEEET
T ss_pred C-cEEEEEC
Confidence 4 3444443
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.1e-26 Score=200.08 Aligned_cols=196 Identities=16% Similarity=0.189 Sum_probs=157.3
Q ss_pred CeecCC--CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-C
Q 045370 1 MVFSDD--GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-T 77 (350)
Q Consensus 1 i~~s~d--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 77 (350)
|+|+|+ +++|++|+.||.|++||+.+. .......+..|...|.+++|++.+ +
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENG-------------------------RWSQIAVHAVHSASVNSVQWAPHEYG 115 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCC-------------------------ceeEeeeecCCCcceEEEEeCCCCCC
Confidence 478877 999999999999999999821 012556677899999999997742 7
Q ss_pred cEEEEEeCCCcEEEEeCCCCceE---EEEecCCceeEEEEcC-------------CCcEEEEEccCCeEEEEeCCccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILI---QTQVYPQAVTAIAFHP-------------GEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
.++++++.|+.|++||+.++... ....|...|.+++|+| ++.+|++++.||.|++||++.....
T Consensus 116 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 116 PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 89999999999999999987432 2346888999999999 6999999999999999999854321
Q ss_pred cccccccccceeeeccCCceEEEEecCC---e--EEEEeCCCcEEEEECCCce-----EEEEeccCCCceeEEEEEccCC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSAS---H--LISASEDKTVCLWDVTRRV-----SIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~--l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
......+.+|...|++++|+|+ + |++++.||.|++||++++. .+.....|...|.+++|+|+++
T Consensus 196 ------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 196 ------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 269 (379)
T ss_dssp ------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred ------eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC
Confidence 1233467789999999999998 6 9999999999999999863 2223334888999999999999
Q ss_pred eEEeeecCccccccccC
Q 045370 212 LLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 212 ~l~~~~~~~~~~~~~~~ 228 (350)
+|++++.++. +.+|++
T Consensus 270 ~l~~~~~dg~-i~iw~~ 285 (379)
T 3jrp_A 270 VLALSGGDNK-VTLWKE 285 (379)
T ss_dssp CEEEEESSSS-EEEEEE
T ss_pred EEEEecCCCc-EEEEeC
Confidence 9998887643 444444
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=2e-26 Score=199.68 Aligned_cols=231 Identities=19% Similarity=0.222 Sum_probs=169.8
Q ss_pred CeecCC---CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccc-ceeeeccccCCceEEEEee--
Q 045370 1 MVFSDD---GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRS-LLHYSLEHKSSVTGLLTIS-- 74 (350)
Q Consensus 1 i~~s~d---g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~-- 74 (350)
++|+|+ |.+|++|+.||.|++||+.+ .. ....+.+|...|.++.|.+
T Consensus 71 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------------------------~~~~~~~~~~~~~~v~~~~~~~~~ 123 (357)
T 3i2n_A 71 GTFGATSLQQRYLATGDFGGNLHIWNLEA---------------------------PEMPVYSVKGHKEIINAIDGIGGL 123 (357)
T ss_dssp EECTTCCTTTCCEEEEETTSCEEEECTTS---------------------------CSSCSEEECCCSSCEEEEEEESGG
T ss_pred EEEcCCCCCCceEEEecCCCeEEEEeCCC---------------------------CCccEEEEEecccceEEEeecccc
Confidence 478898 79999999999999999983 33 5677789999999997753
Q ss_pred ---CCCcEEEEEeCCCcEEEEeCCCCc-eEEEEe-c----CCceeEEE----EcCCCcEEEEEccCCeEEEEeCCccccc
Q 045370 75 ---GGTTFFVSSSLDATCKVWDLGSGI-LIQTQV-Y----PQAVTAIA----FHPGEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 75 ---~~~~~l~s~~~d~~v~vwd~~~~~-~~~~~~-~----~~~v~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
+++.+|++++.||.|++||+.++. ....+. + ...+.+++ |+|++.++++++.||.|++||++.+..
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~- 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL- 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-
Confidence 577899999999999999999886 555543 2 33788888 678999999999999999999986432
Q ss_pred cccccccccceeeeccCCceEEEEecC---Ce--EEEEeCCCcEEEEECCCceEEEEec-----cCCCceeEEEEEccCC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSA---SH--LISASEDKTVCLWDVTRRVSIRRFN-----HKKGVVTNLVVIRQSS 211 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~--l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~l~~~~~~~ 211 (350)
.....|...|.+++|+| ++ +++++.||.|++||+++++.+..+. .|...|.+++|+|+++
T Consensus 203 ----------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 203 ----------RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp ----------EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred ----------eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 24467889999999999 66 9999999999999999877655544 8999999999999998
Q ss_pred -eEEeeecCccccccccCCccccCCCC---c--cccccceEEeeccccCCCCcccccccccchhh
Q 045370 212 -LLSEVSNCQRKLKKDRMPSLEKYPQL---N--SLSMEMVILLQSCFFNKDDQCSINIRRTKSLF 270 (350)
Q Consensus 212 -~l~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (350)
+|++++.++ .+.+|++......... . .........+....+|...+..+.|++++.++
T Consensus 273 ~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 273 ELFLTAGGAG-GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp EEEEEEETTS-EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred cEEEEEeCCC-cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 777777664 3334433221111000 0 00000112333345566666677777776654
No 84
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=4e-26 Score=191.03 Aligned_cols=214 Identities=14% Similarity=0.060 Sum_probs=145.7
Q ss_pred CeecCC----CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee--
Q 045370 1 MVFSDD----GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS-- 74 (350)
Q Consensus 1 i~~s~d----g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-- 74 (350)
|+|||| ++++++++.+ +.+|++.++.... ......++.+..+.....+..+.....|...+..++|++
T Consensus 117 la~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~----ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 117 LFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVS----SSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp ECC------CCEEEEEEEEE--EEEEEETTTEEEE----EESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred EEECCCccccccEEEeCCCe--EEEEecCCCcEEE----ecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 478999 8899988743 7777764211111 101112333333333334566677788999998888876
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEEEe-c---CCceeEEEEcCCCcEE------------EEEccCCeEEEEeCCcc
Q 045370 75 GGTTFFVSSSLDATCKVWDLGSGILIQTQV-Y---PQAVTAIAFHPGEQLL------------FAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~---~~~v~~~~~~~~~~~l------------~~~~~dg~i~i~d~~~~ 138 (350)
.++.+|++|+.|++|++||+.+++++..+. | ...+.+++|+|+|.++ ++|+.|++|++||..++
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 356899999999999999999999999875 3 3467788999999886 56778999999999876
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCcee-EEEEEccCCeEEeee
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVT-NLVVIRQSSLLSEVS 217 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~~~~ 217 (350)
......... .-.+|...+.+..++...+++|+.|++|+|||+.+++++.++.+|...+. +++|+|+|++|++|+
T Consensus 271 k~l~v~~~~-----~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 271 LSVGVMLYC-----LPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEEEEEEC-----CCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred EEEEEEEee-----ccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 543211000 01356655555555533389999999999999999999999998877655 589999999999887
Q ss_pred cCccccccc
Q 045370 218 NCQRKLKKD 226 (350)
Q Consensus 218 ~~~~~~~~~ 226 (350)
.|+ .+++|
T Consensus 346 ~D~-TIklW 353 (356)
T 2w18_A 346 KDG-NIFVY 353 (356)
T ss_dssp TTS-CEEEE
T ss_pred CCC-cEEEe
Confidence 663 34444
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.9e-26 Score=198.47 Aligned_cols=182 Identities=12% Similarity=0.187 Sum_probs=148.1
Q ss_pred CeecCC----CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-----cccCCceEEE
Q 045370 1 MVFSDD----GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-----EHKSSVTGLL 71 (350)
Q Consensus 1 i~~s~d----g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~ 71 (350)
|+|+|+ ...+++++.++.|++||+.+ ...+..+. .|...|.+++
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~---------------------------~~~~~~~~~~~~~~~~~~v~~~~ 76 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSNRVTLYECHS---------------------------QGEIRLLQSYVDADADENFYTCA 76 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETTEEEEEEECG---------------------------GGCEEEEEEEECSCTTCCEEEEE
T ss_pred EEEecccCCCCceEEEECCCCEEEEEEcCC---------------------------CcEEEeeeeccccCCCCcEEEEE
Confidence 478884 45677777778999999983 22222222 3678899999
Q ss_pred EeeCC---CcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 72 TISGG---TTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 72 ~~~~~---~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
|++.. +.+|++|+.||.|++||+.+++.+..+. |...|.+++|+| ++.+|++++.||.|++||++.+..
T Consensus 77 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------ 150 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL------ 150 (366)
T ss_dssp EEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE------
T ss_pred eccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE------
Confidence 98853 5689999999999999999999888876 899999999999 999999999999999999985432
Q ss_pred ccccceee---eccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec--------------------------
Q 045370 147 GEDQHSVL---KGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN-------------------------- 195 (350)
Q Consensus 147 ~~~~~~~~---~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~-------------------------- 195 (350)
...+ .+|...|.+++|+|++ |++++.||.|++||+++++.+..+.
T Consensus 151 ----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 151 ----VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp ----EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred ----EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 2244 6799999999999998 9999999999999999876554443
Q ss_pred --cCCCceeEEEEEccCCeEEeeecCcc
Q 045370 196 --HKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 196 --~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
.|...|.+++|+ +.++++++.++.
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~ 252 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENA 252 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSE
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCE
Confidence 388999999999 778887777643
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.8e-26 Score=197.72 Aligned_cols=193 Identities=18% Similarity=0.056 Sum_probs=153.5
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc-E
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT-F 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~ 79 (350)
++|+|++++|++|+.||.|++||+.... ..........|...|.+++|++ ++. +
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~------------------------~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 71 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQA------------------------KNVDLLQSLRYKHPLLCCNFID-NTDLQ 71 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTT------------------------TEEEEEEEEECSSCEEEEEEEE-SSSEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCC------------------------ccccceeeeecCCceEEEEECC-CCCcE
Confidence 5799999999999999999999998310 0112445568999999999987 577 8
Q ss_pred EEEEeCCCcEEEEeC-CCCceEEEEe--cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 80 FVSSSLDATCKVWDL-GSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 80 l~s~~~d~~v~vwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+++|+.||.|++||+ .++....... |...|.+++|+| +.+|++++.||.|++||++....... .........+.
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~- 148 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI-AVKNLNSNNTK- 148 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE-EEEESCSSSSS-
T ss_pred EEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc-cccCCeeeEEe-
Confidence 999999999999999 8887755566 899999999999 99999999999999999985110000 00022222344
Q ss_pred cCCceEEEEecCCeEEEEeCCCcEEEEECCC-ce--EEEEeccCCCceeEEEEEc-cCCeEEeeecCcc
Q 045370 157 HNGSITALAFSASHLISASEDKTVCLWDVTR-RV--SIRRFNHKKGVVTNLVVIR-QSSLLSEVSNCQR 221 (350)
Q Consensus 157 ~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~-~~--~~~~~~~~~~~v~~l~~~~-~~~~l~~~~~~~~ 221 (350)
|...|.+++|+|+++++++.|+.|++||+++ +. .......|...+.+++|+| +++++++++.++.
T Consensus 149 ~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 149 VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 8889999999999999999999999999998 44 2333446788999999999 9999998887653
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.5e-26 Score=203.34 Aligned_cols=194 Identities=19% Similarity=0.294 Sum_probs=150.6
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+| ++++|++|+.||+|+|||+.+..... .... .....|...|.+++|++ ++.+
T Consensus 69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~---------------------~~~~-~~~~~h~~~v~~~~~~~-~~~~ 125 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQGVIKIWNLKEIIVGE---------------------VYSS-SLTYDCSSTVTQITMIP-NFDA 125 (437)
T ss_dssp EEEECSSSCEEEEEETTSEEEEEEHHHHHTTC---------------------CCSC-SEEEECSSCEEEEEECT-TSSE
T ss_pred EEECCCCCCEEEEecCCceEEEeECcccccCc---------------------ccce-eeeccCCCCEEEEEEeC-CCCE
Confidence 57999 99999999999999999987311000 0111 12225999999999976 7789
Q ss_pred EEEEeCCCcEEEEeCC---CCceEEEEe-------------cCCceeEEE--EcCCCcEEEEEccCCeEEEEeCCccccc
Q 045370 80 FVSSSLDATCKVWDLG---SGILIQTQV-------------YPQAVTAIA--FHPGEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
|++|+.||+|++||+. +++...... +...+.++. +++++.+|++++.||.|++||++++
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--- 202 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--- 202 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC---
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---
Confidence 9999999999999995 555444322 345566666 5578999999999999999999853
Q ss_pred cccccccccceeeec--cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec-cCCCceeEEEEEc----cCCe
Q 045370 142 DHFIVGEDQHSVLKG--HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN-HKKGVVTNLVVIR----QSSL 212 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~----~~~~ 212 (350)
.....+.+ |...|++++|+|++ |++|+.||.|++||+++++++..+. .|..+|.+++|+| ++.+
T Consensus 203 -------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 203 -------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp -------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred -------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 33446666 88999999999998 9999999999999999999999886 6788999996665 5778
Q ss_pred EEeeecCccccccccC
Q 045370 213 LSEVSNCQRKLKKDRM 228 (350)
Q Consensus 213 l~~~~~~~~~~~~~~~ 228 (350)
|++++.++ .+.+|++
T Consensus 276 l~s~~~dg-~i~iwd~ 290 (437)
T 3gre_A 276 VVGGSSKT-FLTIWNF 290 (437)
T ss_dssp EEEESTTE-EEEEEET
T ss_pred EEEEcCCC-cEEEEEc
Confidence 88777664 3344443
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=7.4e-26 Score=226.64 Aligned_cols=156 Identities=26% Similarity=0.330 Sum_probs=138.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|||||++|++|+.||+|++||+. ....+..+.+|...|.+++|++ ++.++
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~---------------------------~~~~~~~~~~h~~~v~~~~~s~-~~~~l 672 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAE---------------------------TGEKLLDIKAHEDEVLCCAFSS-DDSYI 672 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT---------------------------TCCEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECC---------------------------CCCEEEEeccCCCCEEEEEEec-CCCEE
Confidence 5799999999999999999999998 4667777889999999999966 77899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcC--CCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHP--GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
++|+.|+.|++||+.+++.+..+ .|...|.+++|+| ++.++++|+.||.|++||+.++ .....+.+|
T Consensus 673 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~----------~~~~~~~~h 742 (1249)
T 3sfz_A 673 ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK----------ECRNTMFGH 742 (1249)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS----------SEEEEECCC
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc----------chhheecCC
Confidence 99999999999999999988886 4888999999999 5568999999999999999854 344477899
Q ss_pred CCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe
Q 045370 158 NGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF 194 (350)
Q Consensus 158 ~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~ 194 (350)
...|++++|+|++ +++++.||.|++||+++++....+
T Consensus 743 ~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccccee
Confidence 9999999999998 999999999999999887665443
No 89
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-26 Score=199.88 Aligned_cols=152 Identities=7% Similarity=-0.029 Sum_probs=121.9
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCC---------CCceEEEE--ecCCceeEEEEcC--CCcEEEEEccCCeE
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLG---------SGILIQTQ--VYPQAVTAIAFHP--GEQLLFAGSIDGRI 130 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~---------~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~~dg~i 130 (350)
...|.++.++|. +++++.|++|++|+.. +++.+..+ .|..+|.+++|+| +++++++++.||.|
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i 151 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTI 151 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCE
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcE
Confidence 456777777553 8999999999999765 55545443 3567899999999 99999999999999
Q ss_pred EEEeCCccccccccccccccceee-eccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEE-EEecc-CCCceeEEE
Q 045370 131 FVSPLKFLLLEDHFIVGEDQHSVL-KGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSI-RRFNH-KKGVVTNLV 205 (350)
Q Consensus 131 ~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~l~ 205 (350)
++||++.+.. .... ..|...+++++|+|++ |++|+.||.|++||+++++.+ ..+.. |.++|++++
T Consensus 152 ~~wd~~~~~~----------~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 152 GFQSYEDDSQ----------YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVK 221 (343)
T ss_dssp EEEESSSSCE----------EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEE
T ss_pred EEEECCCCcE----------EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEE
Confidence 9999986433 1222 2455689999999999 889999999999999999877 77887 999999999
Q ss_pred EEccCCeEEeeecCccccccccCCcc
Q 045370 206 VIRQSSLLSEVSNCQRKLKKDRMPSL 231 (350)
Q Consensus 206 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 231 (350)
|+|++.+|++++.+ .+.+|++...
T Consensus 222 fs~~g~~l~s~~~~--~v~iwd~~~~ 245 (343)
T 3lrv_A 222 FADNGYWMVVECDQ--TVVCFDLRKD 245 (343)
T ss_dssp ECTTSSEEEEEESS--BEEEEETTSS
T ss_pred EeCCCCEEEEEeCC--eEEEEEcCCC
Confidence 99999999988844 6666655443
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=3.4e-25 Score=199.20 Aligned_cols=189 Identities=21% Similarity=0.240 Sum_probs=160.2
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEE
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVS 82 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 82 (350)
+++++++|++|+.||+|++||+. .......+.+|...|.+++|.+ ++ ++++
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~---------------------------~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s 178 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSI---------------------------NKKFLLQLSGHDGGVWALKYAH-GG-ILVS 178 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEECS-TT-EEEE
T ss_pred EEECCCEEEEEcCCCcEEEEECC---------------------------CCcEEEEEeCCCcCEEEEEEcC-CC-EEEE
Confidence 45678899999999999999998 4667777889999999999965 44 8999
Q ss_pred EeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEc--CCCcEEEEEccCCeEEEEeCCcccccccccc-------------
Q 045370 83 SSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFH--PGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV------------- 146 (350)
Q Consensus 83 ~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------- 146 (350)
|+.||+|++||+.+++.+..+. |...|.+++|+ +++.++++|+.||.|++||++..........
T Consensus 179 ~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 9999999999999999888875 88999999998 5789999999999999999987543211100
Q ss_pred ccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 147 GEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.......+.+|...+.++..++..+++|+.||.|++||+++++.+..+.+|...|.+++|+|+++++++++.++
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp CTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 01124467789999999977666699999999999999999999999999999999999999999999888775
No 91
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.9e-26 Score=201.86 Aligned_cols=211 Identities=13% Similarity=0.103 Sum_probs=149.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccc-------cc--cEEEeeccccccceeeeccccCCceEEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQL-------DQ--RLIEMELRSLRSLLHYSLEHKSSVTGLL 71 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 71 (350)
|+|||||+++||++.|++|+ |...+... .++.... ++ ..+.+... .........|...|.+++
T Consensus 21 v~~SpDG~~iASas~D~TV~--d~~~~~~l----~gh~~~v~~V~FsPdg~~~~~~~~~~--~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 21 LTWARDGTLYLTTFPDISIG--QPKYAKDI----NCNSKNLFHVKEFPLEFENKLDFELA--QQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp EEECTTSCEEEECSSSEEEE--EECCCSCC----SSBGGGTEEEEEECCCCCCTTTTSCC--CSSCSSTTSCSCCEEEEE
T ss_pred EEECCCCCEEEEEcCCceee--ccccccee----cCCCccEEEEEECCCCCcceEEEEeC--CCceEeecCCCCcEEEEE
Confidence 58999999999999999999 64432111 1221111 11 11111111 111111225688999999
Q ss_pred EeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCC-----ceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 72 TISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQ-----AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 72 ~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
|+| ++.+|++++.||.|++||... ++..+.|.. .+.+++|+|+|++|++|+.||.|++||+..+......
T Consensus 93 wSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~-- 167 (588)
T 2j04_A 93 PSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE-- 167 (588)
T ss_dssp ECS-SSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC--
T ss_pred ECC-CCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc--
Confidence 966 788899999999999999654 555555444 4999999999999999999999999999864321100
Q ss_pred ccccceee----eccCCceEEEEecCCeEEEEeCCCcEEEEECCCceE---EEEe-ccCCCceeEEEEEccCCeEEeeec
Q 045370 147 GEDQHSVL----KGHNGSITALAFSASHLISASEDKTVCLWDVTRRVS---IRRF-NHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 147 ~~~~~~~~----~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~-~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
-..+..+ .+|...|.+++|+|+++++++.|+.|++||+.++.. ..++ .+|...|.+++|+ ++.|++++.
T Consensus 168 -~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~ 244 (588)
T 2j04_A 168 -FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCP 244 (588)
T ss_dssp -CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECS
T ss_pred -ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeC
Confidence 0012243 568889999999999988999999999999988773 3456 4788899999999 688887763
Q ss_pred CccccccccCC
Q 045370 219 CQRKLKKDRMP 229 (350)
Q Consensus 219 ~~~~~~~~~~~ 229 (350)
+.+.+|+..
T Consensus 245 --~tIkLWd~~ 253 (588)
T 2j04_A 245 --GYVHKIDLK 253 (588)
T ss_dssp --SEEEEEETT
T ss_pred --CeEEEEECC
Confidence 455555443
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=2e-25 Score=196.95 Aligned_cols=186 Identities=16% Similarity=0.239 Sum_probs=152.8
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-cccCCceEEEEeeCCCcEEE
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-EHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~ 81 (350)
+++++..+++++.||.|++||+.+ +....... .|...|.+++|++ ++.+|+
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~---------------------------~~~~~~~~~~~~~~v~~v~~s~-~~~~l~ 150 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADS---------------------------GSVSALAETDESTYVASVKWSH-DGSFLS 150 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTT---------------------------CCEEEEEECCTTCCEEEEEECT-TSSEEE
T ss_pred EeecCCCEEEEECCCeEEEeeCCC---------------------------CcEeEeeecCCCCCEEEEEECC-CCCEEE
Confidence 334456688899999999999983 33333333 3889999999976 778999
Q ss_pred EEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 82 SSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 82 s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
+|+.||.|++||+.+++.+..+ .|...|.+++| ++.++++++.||.|++||++.. ......+.+|...
T Consensus 151 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~ 219 (401)
T 4aez_A 151 VGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA---------NHQIGTLQGHSSE 219 (401)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS---------SCEEEEEECCSSC
T ss_pred EECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC---------cceeeEEcCCCCC
Confidence 9999999999999999888876 58889999999 4679999999999999999842 3344577889999
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec--Ccccccccc
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN--CQRKLKKDR 227 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--~~~~~~~~~ 227 (350)
|.+++|+|++ |++|+.||.|++||+++++.+..+..|...|.+++|+|++..++++++ .+..+.+|+
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 9999999998 999999999999999999999999999999999999998764444332 344444553
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-25 Score=194.84 Aligned_cols=181 Identities=14% Similarity=0.175 Sum_probs=154.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|++++|++++.||.|++||+. .......+. |...|.+++|++ ++.++
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~---------------------------~~~~~~~~~-~~~~v~~~~~~~-~~~~l 130 (369)
T 3zwl_B 80 IDVDCFTKYCVTGSADYSIKLWDVS---------------------------NGQCVATWK-SPVPVKRVEFSP-CGNYF 130 (369)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETT---------------------------TCCEEEEEE-CSSCEEEEEECT-TSSEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECC---------------------------CCcEEEEee-cCCCeEEEEEcc-CCCEE
Confidence 5799999999999999999999998 344444444 889999999966 67889
Q ss_pred EEEeCC-----CcEEEEeCCCCceE-----------E-EEecCC--ceeEEEEcCCCcEEEEEccCCeEEEEeCCccccc
Q 045370 81 VSSSLD-----ATCKVWDLGSGILI-----------Q-TQVYPQ--AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 81 ~s~~~d-----~~v~vwd~~~~~~~-----------~-~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
++++.+ +.|.+||+..+... . ...+.. .+.+++|+|++++|++++.||.|++||++..
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--- 207 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN--- 207 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT---
T ss_pred EEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC---
Confidence 999998 99999998865321 1 123444 8999999999999999999999999999852
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
......+..|...|.+++|+|++ |++++.||.|++||+++++.+..+. +..++.+++|+|+++++++++.+
T Consensus 208 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 208 ------YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp ------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECC
T ss_pred ------cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecC
Confidence 33445777899999999999998 9999999999999999999998888 77899999999999999988876
Q ss_pred c
Q 045370 220 Q 220 (350)
Q Consensus 220 ~ 220 (350)
+
T Consensus 281 ~ 281 (369)
T 3zwl_B 281 E 281 (369)
T ss_dssp C
T ss_pred C
Confidence 5
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=4.8e-26 Score=203.11 Aligned_cols=184 Identities=12% Similarity=0.094 Sum_probs=142.5
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccc--eeeeccccCCceEEEEeeCCC
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSL--LHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~ 77 (350)
|+|+| ++++|+||+.||+|++||+++ ... ......+...+.+++|++ ++
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~ 221 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKG---------------------------NILRVFASSDTINIWFCSLDVSA-SS 221 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTS---------------------------CEEEEEECCSSCSCCCCCEEEET-TT
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccC---------------------------CceeEEeccCCCCccEEEEEECC-CC
Confidence 57998 689999999999999999972 211 112233445678888865 77
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.+|++|+.||.|++||++.........|...|.+++|+|++. +|++|+.|+.|++||++...... ......+
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-------~~~~~~~ 294 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-------SFLYSLP 294 (435)
T ss_dssp TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS-------CCSBCCB
T ss_pred CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc-------eEEEeee
Confidence 899999999999999998654433356889999999999876 78899999999999998654221 2224457
Q ss_pred cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCC------ceeEEEEEccCCeEEeeecC
Q 045370 157 HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKG------VVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 157 ~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~v~~l~~~~~~~~l~~~~~~ 219 (350)
|...|++++|+|++ |++++.||.|+|||++++.....+..|.. .+..+.|+|++.++++++..
T Consensus 295 h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYP 365 (435)
T ss_dssp CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCC
T ss_pred ccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcC
Confidence 99999999999998 99999999999999999887777655432 23456788887777766543
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=3.2e-25 Score=199.33 Aligned_cols=179 Identities=22% Similarity=0.351 Sum_probs=152.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee-CCCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS-GGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~ 79 (350)
++|+|++ +|++|+.||+|++||+. .......+.+|...|.+++|.+ +++.+
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~---------------------------~~~~~~~~~~h~~~v~~l~~~~~~~~~~ 219 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIK---------------------------KGCCTHVFEGHNSTVRCLDIVEYKNIKY 219 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETT---------------------------TTEEEEEECCCSSCEEEEEEEESSSCEE
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECC---------------------------CCcEEEEECCCCCccEEEEEecCCCCCE
Confidence 4688888 99999999999999998 4666777889999999999986 46689
Q ss_pred EEEEeCCCcEEEEeCCCCceEE-----------------------E-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQ-----------------------T-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~-----------------------~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 135 (350)
+++|+.|++|++||+.++.... . ..|...+.++ +++++++++++.||.|++||+
T Consensus 220 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 220 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDV 297 (464)
T ss_dssp EEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEET
T ss_pred EEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEEC
Confidence 9999999999999999875321 2 2356666665 578899999999999999999
Q ss_pred CccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeE
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLL 213 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 213 (350)
+++ ..+..+.+|...|.+++|+|++ +++|+.||.|++||+++++.+..+.+|...|.+++|+ +.+|
T Consensus 298 ~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l 365 (464)
T 3v7d_B 298 AQM----------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFL 365 (464)
T ss_dssp TTT----------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEE
T ss_pred CCC----------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEE
Confidence 853 3445778899999999999998 9999999999999999999999999999999999997 5788
Q ss_pred EeeecCcc
Q 045370 214 SEVSNCQR 221 (350)
Q Consensus 214 ~~~~~~~~ 221 (350)
++++.|+.
T Consensus 366 ~s~s~dg~ 373 (464)
T 3v7d_B 366 VSAAADGS 373 (464)
T ss_dssp EEEETTSE
T ss_pred EEEeCCCc
Confidence 87877753
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.1e-25 Score=200.08 Aligned_cols=179 Identities=12% Similarity=0.022 Sum_probs=144.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC-----CceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS-----SVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~ 75 (350)
++|||||.+||+++.||.|++||.+ . ++..+. |.. .|.+++|+|
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~----------------------------~-~l~~l~-~~~~~~~~sv~svafSP- 139 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDN----------------------------K-MLTNLD-SKGNLSSRTYHCFEWNP- 139 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETT----------------------------E-EEEECC-CSSCSTTTCEEEEEECS-
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCC----------------------------c-eeeecc-CCCccccccEEEEEEcC-
Confidence 5899999999999999999999976 1 344444 554 599999966
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCce-------EEEE-----ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccc
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGIL-------IQTQ-----VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~-------~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
++.+|++|+.||+|++||+.++.. +..+ +|...|.+++|+|+| +++++.|+.|++||+......
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~-- 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ-- 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC--
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc--
Confidence 789999999999999999998853 4443 256799999999999 888888999999999853210
Q ss_pred cccccccceee-eccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEE--EccCCeEEeeecC
Q 045370 144 FIVGEDQHSVL-KGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVV--IRQSSLLSEVSNC 219 (350)
Q Consensus 144 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~~~~~~ 219 (350)
.....+ .+|...|.+++|+ +. +++++ +++|++||+.+++......+|.+.|.+++| +|++..+++++.+
T Consensus 216 -----~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 216 -----PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp -----CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC
T ss_pred -----cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC
Confidence 012245 4788999999999 44 88887 699999999998884444379999999999 9999999988866
Q ss_pred cc
Q 045370 220 QR 221 (350)
Q Consensus 220 ~~ 221 (350)
+.
T Consensus 289 G~ 290 (588)
T 2j04_A 289 SY 290 (588)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-25 Score=200.11 Aligned_cols=191 Identities=13% Similarity=0.152 Sum_probs=155.9
Q ss_pred CeecCCCCEE-EEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec--cccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLL-ISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL--EHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~ 77 (350)
++|+|+|++| ++|+.||.|+|||+... .......+. .|...|.+++|++ ++
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~-------------------------~~~~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKT-------------------------SKNVLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSS-------------------------SSSCEEEEEEEECSSCEEEEEECT-TS
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCC-------------------------CCceeeeeecccCCCCceEEEEcC-CC
Confidence 4799999996 89999999999998710 122333333 5778999999966 77
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEE----E-EecCCceeEEEEcCC---CcEEEEEccCCeEEEEeCCccccccccccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQ----T-QVYPQAVTAIAFHPG---EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~----~-~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 149 (350)
.+|++|+.||.|.+|++.++.... . ..|...|.+++|+|+ +.+|++++.|+.|++||++.+.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---------- 231 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---------- 231 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT----------
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc----------
Confidence 899999999999999998876543 3 468899999999999 9999999999999999998543
Q ss_pred ccee-eeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEecc-------------------------CCCce
Q 045370 150 QHSV-LKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH-------------------------KKGVV 201 (350)
Q Consensus 150 ~~~~-~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~-------------------------~~~~v 201 (350)
.... +.+|...|++++|+ ++ |++++.|+.|++||+++++.+..+.. ....|
T Consensus 232 ~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 232 IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 2223 55899999999999 77 99999999999999999998887752 23568
Q ss_pred eEEEEEccCCeEEeeecCccccccccC
Q 045370 202 TNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 202 ~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
.+++|+|++++|++++..+..+.+|++
T Consensus 311 ~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 311 SKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999988855555666655
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=4.5e-25 Score=191.48 Aligned_cols=190 Identities=13% Similarity=0.125 Sum_probs=138.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|||++|++|+.|+ ++|||+.+ ....... +...+..+.+.+....++
T Consensus 25 v~fs~dg~~la~g~~~~-~~iw~~~~---------------------------~~~~~~~--~~~~~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 25 YEFNQDQSCLILSTLKS-FEIYNVHP---------------------------VAHIMSQ--EMRHLSKVRMLHRTNYVA 74 (355)
T ss_dssp EEECTTSSEEEEECSSE-EEEEEETT---------------------------EEEEEEE--ECSCCCEEEECTTSSEEE
T ss_pred EEECCCCCEEEEEcCCE-EEEEecCC---------------------------cceeeee--ecCCeEEEEEcCCCCEEE
Confidence 58999999999998775 78999872 2222221 222466777766544455
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcE-----------------------------------EEE--
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQL-----------------------------------LFA-- 123 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------------------------------l~~-- 123 (350)
++++.|++|++||+.+++.+..+.+...|.+++|+++... ++.
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~s 154 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSN 154 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeC
Confidence 7788899999999999999999888899999999875311 111
Q ss_pred EccCCeEEEEeCCccccccccc-----ccccc-ceeeeccCCceEEEEecCCe--EEEEeCCCc-EEEEECCCceEEEEe
Q 045370 124 GSIDGRIFVSPLKFLLLEDHFI-----VGEDQ-HSVLKGHNGSITALAFSASH--LISASEDKT-VCLWDVTRRVSIRRF 194 (350)
Q Consensus 124 ~~~dg~i~i~d~~~~~~~~~~~-----~~~~~-~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~-v~iwd~~~~~~~~~~ 194 (350)
|+.||.|++||+..+....... ....+ ...+.+|...|++++|+|++ |++|+.|++ |++||+++++.+..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 2344444444444321000000 00011 56788999999999999999 999999998 999999999999999
Q ss_pred c-c-CCCceeEEEEEccCCeEEeeecCc
Q 045370 195 N-H-KKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 195 ~-~-~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
. + |...|.+++|+|++++|++++.|+
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCC
Confidence 8 5 999999999999999999888764
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=3.8e-25 Score=192.55 Aligned_cols=148 Identities=15% Similarity=0.022 Sum_probs=117.6
Q ss_pred ccCCceEEEEeeCCCcEEE--EEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccc
Q 045370 63 HKSSVTGLLTISGGTTFFV--SSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~--s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 140 (350)
+...+.+++|+| ++++++ +++.|++|++||+.+++.+..+.|...|.+++|+|+|+++++++.++ +.+|+..++..
T Consensus 132 ~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~ 209 (365)
T 4h5i_A 132 ADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSC 209 (365)
T ss_dssp TTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCE
T ss_pred cccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcc
Confidence 445688899866 667665 45579999999999999999999999999999999999999998655 55555553321
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe--EEEEeCCC----cEEEEECCCceE----EEEeccCCCceeEEEEEccC
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDK----TVCLWDVTRRVS----IRRFNHKKGVVTNLVVIRQS 210 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg----~v~iwd~~~~~~----~~~~~~~~~~v~~l~~~~~~ 210 (350)
. .......|...|.+++|+|++ +++++.|+ .+++||+..... ...+..|..+|++++|+|+|
T Consensus 210 ~--------~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 210 I--------ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp E--------EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred e--------eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 1 112345688899999999998 88888877 688999876543 34567889999999999999
Q ss_pred CeEEeeecCc
Q 045370 211 SLLSEVSNCQ 220 (350)
Q Consensus 211 ~~l~~~~~~~ 220 (350)
++|++|+.|+
T Consensus 282 ~~lasgs~D~ 291 (365)
T 4h5i_A 282 ELAVLASNDN 291 (365)
T ss_dssp CEEEEEETTS
T ss_pred CceEEEcCCC
Confidence 9999888874
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=5.6e-26 Score=227.49 Aligned_cols=185 Identities=23% Similarity=0.359 Sum_probs=158.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||+.+ .. ......|...|.++.|++ + ..+
T Consensus 1009 l~~s~dg~~l~s~~~dg~i~vwd~~~---------------------------~~-~~~~~~~~~~v~~~~~~~-~-~~l 1058 (1249)
T 3sfz_A 1009 IQFTADGKTLISSSEDSVIQVWNWQT---------------------------GD-YVFLQAHQETVKDFRLLQ-D-SRL 1058 (1249)
T ss_dssp EEECSSSSCEEEECSSSBEEEEETTT---------------------------TE-EECCBCCSSCEEEEEECS-S-SEE
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCC---------------------------Cc-eEEEecCCCcEEEEEEcC-C-CcE
Confidence 47999999999999999999999982 22 234568999999999976 4 458
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++++.||.|++||+.+++....+. |...|.+++|+|++.++++++.||.|++||+.++ .....+.+|..
T Consensus 1059 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~----------~~~~~l~~h~~ 1128 (1249)
T 3sfz_A 1059 LSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLL----------SPLHELKGHNG 1128 (1249)
T ss_dssp EEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSS----------SCSBCCCCCSS
T ss_pred EEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCc----------ceeeeeccCCC
Confidence 899999999999999999887765 8889999999999999999999999999999853 34457788999
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe---------ccCCCceeEEEEEccCCeEEeeecCcccccc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF---------NHKKGVVTNLVVIRQSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~---------~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~ 225 (350)
.|++++|+|++ |++|+.||.|++||+.+++.+..+ ..|.+.|++++|+|++++|+++++..++|.+
T Consensus 1129 ~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~ 1205 (1249)
T 3sfz_A 1129 CVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNV 1205 (1249)
T ss_dssp CEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCS
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEEC
Confidence 99999999999 999999999999999998887765 5688999999999999999988754455544
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=2.3e-24 Score=191.33 Aligned_cols=192 Identities=16% Similarity=0.258 Sum_probs=139.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccccee--eeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH--YSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~ 78 (350)
|+||++ ++||+|. |++|+|||.. .+.... ...+|...|++++|++ ++.
T Consensus 111 l~wS~~-n~lAvgl-d~tV~lWd~~---------------------------tg~~~~~~~~~~~~~~V~sv~fsp-dg~ 160 (420)
T 4gga_A 111 VDWSSG-NVLAVAL-DNSVYLWSAS---------------------------SGDILQLLQMEQPGEYISSVAWIK-EGN 160 (420)
T ss_dssp EEECTT-SEEEEEE-TTEEEEEETT---------------------------TCCEEEEEECCSTTCCEEEEEECT-TSS
T ss_pred EEECCC-CEEEEEe-CCEEEEEECC---------------------------CCCEEEEEEecCCCCcEEEEEECC-CCC
Confidence 578875 4777775 8999999998 344433 3457888999999966 788
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEe-cCC-----------------------------------------ceeEEEEcC
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQV-YPQ-----------------------------------------AVTAIAFHP 116 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~-----------------------------------------~v~~~~~~~ 116 (350)
+|++|+.||+|++||+.+++.+..+. |.. .+..+.|+|
T Consensus 161 ~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 161 YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 99999999999999999887665532 433 344455555
Q ss_pred CCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEE--EeCCCcEEEEECCCceEE
Q 045370 117 GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LIS--ASEDKTVCLWDVTRRVSI 191 (350)
Q Consensus 117 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s--~~~dg~v~iwd~~~~~~~ 191 (350)
++.++++++.|+.+++|+...+.. ..........|...|.+++|+|.+ +++ |+.|+.|++||+.+++++
T Consensus 241 ~g~~l~s~~~D~~v~i~~~~~~~~------~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 241 DGRHLASGGNDNLVNVWPSAPGEG------GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp TSSEEEEEETTSCEEEEESSCCSS------CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred CCCeeeeeeccccceEEeeccccc------cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 555555555555555555553321 112334566788999999999977 444 558999999999999999
Q ss_pred EEeccCCCceeEEEEEccCCeEEeeec-CccccccccCC
Q 045370 192 RRFNHKKGVVTNLVVIRQSSLLSEVSN-CQRKLKKDRMP 229 (350)
Q Consensus 192 ~~~~~~~~~v~~l~~~~~~~~l~~~~~-~~~~~~~~~~~ 229 (350)
..+.. ...+.++.|+|+++.++++++ .+..+.+|+..
T Consensus 315 ~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 315 SAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp EEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred eeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 98885 467899999999998887764 34555555543
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=4.8e-25 Score=211.61 Aligned_cols=182 Identities=20% Similarity=0.246 Sum_probs=158.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++|++|+.||.|++||+. .+.....+.+|...|.+++|++ ++.++
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~---------------------------~~~~~~~~~~~~~~v~~~~~s~-~~~~l 112 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYN---------------------------TGEKVVDFEAHPDYIRSIAVHP-TKPYV 112 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCSSCEEEEEECS-SSSEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECC---------------------------CCcEEEEEecCCCCEEEEEEeC-CCCEE
Confidence 4799999999999999999999998 4666777788999999999966 67889
Q ss_pred EEEeCCCcEEEEeCCCC-ceEEEE-ecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCccccccccccccccceeeec-
Q 045370 81 VSSSLDATCKVWDLGSG-ILIQTQ-VYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG- 156 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~-~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~- 156 (350)
++++.||.|++||+.++ .....+ .|...|.+++|+| ++..|++++.||.|++||+.... ....+..
T Consensus 113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~----------~~~~~~~~ 182 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST----------PNFTLTTG 182 (814)
T ss_dssp EEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS----------CSEEEECC
T ss_pred EEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----------ceeEEecC
Confidence 99999999999999987 444444 4888999999999 88999999999999999997432 2224444
Q ss_pred cCCceEEEEecC--Ce--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 157 HNGSITALAFSA--SH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 157 ~~~~i~~~~~~~--~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+...+.+++|+| ++ +++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.++
T Consensus 183 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 183 QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 448899999998 76 99999999999999999999999999999999999999999999888765
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.6e-25 Score=185.59 Aligned_cols=201 Identities=21% Similarity=0.229 Sum_probs=155.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCcccccccccccccc----------------ccccccE--EEeeccccccceeeecc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHS----------------DQLDQRL--IEMELRSLRSLLHYSLE 62 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~----------------~~~~~~~--~~~~~~~~~~~~~~~~~ 62 (350)
|+| |++++|++|+.||.|++||+.+.........+.. ...++.+ +.+...........+.+
T Consensus 24 ~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 24 VVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp EEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred EEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 467 8999999999999999999975432221111110 0112222 22322333355667788
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCcccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 140 (350)
|...|.++.| ++.++++++.|+.|++|| .+.....+ .|...+.+++|.| ++.++++++.||.|++||...
T Consensus 103 ~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--- 174 (313)
T 3odt_A 103 HQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--- 174 (313)
T ss_dssp CSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---
T ss_pred cccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---
Confidence 9999999998 356899999999999999 55555554 5888999999998 899999999999999999442
Q ss_pred ccccccccccceeeec-cCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 141 EDHFIVGEDQHSVLKG-HNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
....+.. |...+.+++|+|++ +++++.||.|++||+++++.+..+..|..+|.+++|+|++. |++++.
T Consensus 175 ---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~ 244 (313)
T 3odt_A 175 ---------VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGE 244 (313)
T ss_dssp ---------EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEET
T ss_pred ---------eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEec
Confidence 1224444 88999999999999 99999999999999999999999999999999999999994 666666
Q ss_pred Cc
Q 045370 219 CQ 220 (350)
Q Consensus 219 ~~ 220 (350)
++
T Consensus 245 dg 246 (313)
T 3odt_A 245 DR 246 (313)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.8e-26 Score=201.79 Aligned_cols=191 Identities=11% Similarity=0.200 Sum_probs=152.2
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecc--ccCCceEEEEeeCCCcEE
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE--HKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l 80 (350)
+++++.+|++|+.||.|++||+. ....+..+.. |...|.+++|++ ++.+|
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~---------------------------~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 229 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIR---------------------------TLERLQIIENSPRHGAVSSICIDE-ECCVL 229 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCGGGCCEEEEEECT-TSCEE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCC---------------------------CCeeeEEEccCCCCCceEEEEECC-CCCEE
Confidence 56889999999999999999998 4556666666 899999999966 68899
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE--ecCCceeEEEEcC----CCcEEEEEccCCeEEEEeCCccccccccccccccc---
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ--VYPQAVTAIAFHP----GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH--- 151 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--- 151 (350)
++|+.||.|++||+++++.+..+ .|..+|.+++|+| ++.+|++|+.||.|++||++++.............
T Consensus 230 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3gre_A 230 ILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME 309 (437)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG
T ss_pred EEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc
Confidence 99999999999999999988876 5677899997665 67799999999999999998766433221111000
Q ss_pred -----------eeeec--cCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc---------------------
Q 045370 152 -----------SVLKG--HNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH--------------------- 196 (350)
Q Consensus 152 -----------~~~~~--~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------- 196 (350)
..+.+ |...|++++|++.. |++|+.||.|++||+.+++.+..+.+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (437)
T 3gre_A 310 HFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLL 389 (437)
T ss_dssp GGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEE
T ss_pred eecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEE
Confidence 01233 88889999999555 99999999999999998876666654
Q ss_pred ----------------CCCceeEEEEEcc--CCeEEeeecCcc
Q 045370 197 ----------------KKGVVTNLVVIRQ--SSLLSEVSNCQR 221 (350)
Q Consensus 197 ----------------~~~~v~~l~~~~~--~~~l~~~~~~~~ 221 (350)
|...|.+++|+++ +.+|++++.++.
T Consensus 390 ~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 390 RKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 7788999999988 668887776653
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.8e-26 Score=201.01 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=121.4
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee-------C
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS-------G 75 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------~ 75 (350)
+++++.+|++|+.|++|+|||....... ....+..+.+|.+.|.+++|+| .
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~----------------------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~ 154 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETII----------------------TQHVLGGKSGHHNFVNDIDIADVYSADNRL 154 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEE----------------------EEEEECTTTSCSSCEEEEEEEEEECTTCSE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccc----------------------eeeeecccCCCCCceEEEEEccccccccCC
Confidence 4567789999999999999998731100 1123445689999999999976 2
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEE-EEecCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCcccccccccc-------
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQ-TQVYPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIV------- 146 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~------- 146 (350)
++++|++|+.|++|+|||+.++.... .+.|..++.+++|+|++. +|++++.||.|++||++++........
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 56899999999999999998776554 467999999999999874 899999999999999987653321100
Q ss_pred --------ccccceeeeccCCceEEEEec-CCe--EEEEeCCCcEEEEECCCceEEEEeccCCCce
Q 045370 147 --------GEDQHSVLKGHNGSITALAFS-ASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVV 201 (350)
Q Consensus 147 --------~~~~~~~~~~~~~~i~~~~~~-~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v 201 (350)
.........+|...+.++.|+ |++ +++++.|+.+++||+.+++....+..|...+
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~ 300 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKL 300 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCcc
Confidence 001111335688899999987 676 9999999999999999877666665444333
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.4e-25 Score=211.45 Aligned_cols=197 Identities=17% Similarity=0.193 Sum_probs=159.2
Q ss_pred CeecCC--CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-C
Q 045370 1 MVFSDD--GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-T 77 (350)
Q Consensus 1 i~~s~d--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 77 (350)
|+|+|+ +++|++|+.||.|++||+.++ .........+|...|.+++|+|.. +
T Consensus 59 l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~-------------------------~~~~~~~~~~h~~~V~~v~~sp~~~~ 113 (753)
T 3jro_A 59 VDWAHPKFGTILASCSYDGKVLIWKEENG-------------------------RWSQIAVHAVHSASVNSVQWAPHEYG 113 (753)
T ss_dssp EEECCTTSCSEEEEEETTSCEEEEEEETT-------------------------EEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred EEecCCCCCCEEEEEeCCCeEEEEECCCC-------------------------cccccccccCCCCCeEEEEECCCCCC
Confidence 478888 999999999999999999821 112556678899999999997742 7
Q ss_pred cEEEEEeCCCcEEEEeCCCCc---eEEEEecCCceeEEEEcC-------------CCcEEEEEccCCeEEEEeCCccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGI---LIQTQVYPQAVTAIAFHP-------------GEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
.++++|+.||.|++||+.++. ......|...|.+++|+| ++.++++|+.||.|++||++.....
T Consensus 114 ~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 114 PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 193 (753)
T ss_dssp SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE
T ss_pred CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc
Confidence 899999999999999998873 233346889999999999 5899999999999999999864221
Q ss_pred cccccccccceeeeccCCceEEEEecCC---e--EEEEeCCCcEEEEECCCce-----EEEEeccCCCceeEEEEEccCC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSAS---H--LISASEDKTVCLWDVTRRV-----SIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~--l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
......+.+|...|++++|+|+ + +++|+.||.|++||++++. .+.....|...|++++|+|+++
T Consensus 194 ------~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 267 (753)
T 3jro_A 194 ------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (753)
T ss_dssp ------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC
T ss_pred ------ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC
Confidence 1233467789999999999999 6 9999999999999999864 3333445888999999999999
Q ss_pred eEEeeecCccccccccCC
Q 045370 212 LLSEVSNCQRKLKKDRMP 229 (350)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~ 229 (350)
++++++.++. +.+|++.
T Consensus 268 ~l~s~s~Dg~-I~vwd~~ 284 (753)
T 3jro_A 268 VLALSGGDNK-VTLWKEN 284 (753)
T ss_dssp CEEEECSSSC-EECCBCC
T ss_pred EEEEEcCCCE-EEEEecC
Confidence 9998887653 4455443
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2.3e-24 Score=190.00 Aligned_cols=199 Identities=17% Similarity=0.161 Sum_probs=156.1
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC--C
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG--T 77 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~ 77 (350)
++|+| ++.+|++|+.||.|++||+.+ ...... ..+...+.++.+.+.. +
T Consensus 105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~ 156 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFDKTLKVWDTNT---------------------------LQTADV-FNFEETVYSHHMSPVSTKH 156 (408)
T ss_dssp EEECTTCTTCEEEEETTSEEEEEETTT---------------------------TEEEEE-EECSSCEEEEEECSSCSSC
T ss_pred EEEccCCCcEEEEEeCCCeEEEeeCCC---------------------------Ccccee-ccCCCceeeeEeecCCCCC
Confidence 47899 778999999999999999982 333333 3477889999887643 3
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccc------cccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFI------VGED 149 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~------~~~~ 149 (350)
.++++++.|+.|++||+.+++.+..+. |...|.+++|+|++. .+++++.||.|++||++......... ....
T Consensus 157 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 157 CLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp CEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred cEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence 489999999999999999998887765 888999999999998 58899999999999998654211100 1111
Q ss_pred cceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCc---------------------------------------
Q 045370 150 QHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRR--------------------------------------- 188 (350)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~--------------------------------------- 188 (350)
.......|...|.+++|+|++ |++++.||.|++||++++
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred eccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence 222346789999999999998 999999999999998754
Q ss_pred --------eEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 189 --------VSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 189 --------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+.+..+.+|...|++++|+|++++|++++.|+. +.+|++
T Consensus 317 ~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iw~~ 363 (408)
T 4a11_B 317 AVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCN-ILAWVP 363 (408)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEEE
T ss_pred EEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCe-EEEEeC
Confidence 445666778899999999999999998877653 334433
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=1.5e-25 Score=193.13 Aligned_cols=187 Identities=11% Similarity=0.056 Sum_probs=155.3
Q ss_pred CeecCCCC-EEEEEeCCCcEEEEeC-ccccccccccccccccccccEEEeeccccccceeeecc--ccCCceEEEEeeCC
Q 045370 1 MVFSDDGF-LLISGSDDGMICVWSM-TRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE--HKSSVTGLLTISGG 76 (350)
Q Consensus 1 i~~s~dg~-~l~sg~~dg~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~ 76 (350)
++|+|+++ +|++|+.||.|++||+ . ......+.+ |...|.+++|++
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~----------------------------~~~~~~~~~~~~~~~v~~l~~~~-- 111 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIG----------------------------SPSFQALTNNEANLGICRICKYG-- 111 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSS----------------------------SSSEEECBSCCCCSCEEEEEEET--
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEecc----------------------------CCceEeccccCCCCceEEEEeCC--
Confidence 57999999 9999999999999999 7 223355667 999999999977
Q ss_pred CcEEEEEeCCCcEEEEeCCC---------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCc-ccccccccc
Q 045370 77 TTFFVSSSLDATCKVWDLGS---------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF-LLLEDHFIV 146 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~ 146 (350)
+.++++++.|+.|++||+.+ ++++..+.+...+.+++|+|++ +++++.|+.|++||++. +..
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~------ 183 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD------ 183 (342)
T ss_dssp TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC------
T ss_pred CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc------
Confidence 67899999999999999987 7666667788999999999887 99999999999999985 321
Q ss_pred ccccceeeeccCCceEEEEecC-Ce--EEEEeCCCcEEEEECCCc------eEEEEeccCCC---------ceeEEEEEc
Q 045370 147 GEDQHSVLKGHNGSITALAFSA-SH--LISASEDKTVCLWDVTRR------VSIRRFNHKKG---------VVTNLVVIR 208 (350)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~~~~~-~~--l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~---------~v~~l~~~~ 208 (350)
........|...+.+++|+| ++ +++++.||.|++||++.. +....+..|.. +|.+++|+|
T Consensus 184 --~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 184 --NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp --CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred --cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC
Confidence 11224446788999999999 77 999999999999999886 67777777755 999999999
Q ss_pred cCCeEEeeecCccccccccC
Q 045370 209 QSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~ 228 (350)
++++|++++.++. +.+|+.
T Consensus 262 ~~~~l~~~~~dg~-i~vwd~ 280 (342)
T 1yfq_A 262 RHKFLYTAGSDGI-ISCWNL 280 (342)
T ss_dssp TTCCEEEEETTSC-EEEEET
T ss_pred CCCEEEEecCCce-EEEEcC
Confidence 9999998887653 334433
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=8.4e-25 Score=203.23 Aligned_cols=180 Identities=12% Similarity=0.094 Sum_probs=156.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccc----cceeeeccccCC-ceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLR----SLLHYSLEHKSS-VTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~-v~~~~~~~~ 75 (350)
++|+|||++|++++ ++.|++||+. .. .....+.+|... |.+++|+|.
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~---------------------------~~~~~~~~~~~~~~h~~~~v~~~~~sp~ 75 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLD---------------------------DGDSKVPPVVQFTGHGSSVVTTVKFSPI 75 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECC---------------------------SSCCSSCSEEEECTTTTSCEEEEEECSS
T ss_pred EEECCCCCEEEEec-CCeEEEEECC---------------------------CCCCccccceEEecCCCceEEEEEECcC
Confidence 68999999999998 8899999998 34 567778899999 999999652
Q ss_pred -CCcEEEEEeCCCcEEEEeCCCC--------ceEEEEe-cCCceeEEEEcCCCcEEEEEccC----CeEEEEeCCccccc
Q 045370 76 -GTTFFVSSSLDATCKVWDLGSG--------ILIQTQV-YPQAVTAIAFHPGEQLLFAGSID----GRIFVSPLKFLLLE 141 (350)
Q Consensus 76 -~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~ 141 (350)
++.+|++|+.||.|++||+.++ .....+. |...|.+++|+|++++|++++.+ +.|++||..
T Consensus 76 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~----- 150 (615)
T 1pgu_A 76 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG----- 150 (615)
T ss_dssp TTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-----
T ss_pred CCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-----
Confidence 6789999999999999999755 4444444 88899999999999999999987 799999843
Q ss_pred cccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCC---ceeEEEEEcc-CCeEE
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKG---VVTNLVVIRQ-SSLLS 214 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~ 214 (350)
.....+.+|...|.+++|+|++ +++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ +++|+
T Consensus 151 -------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (615)
T 1pgu_A 151 -------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI 223 (615)
T ss_dssp -------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEE
T ss_pred -------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEE
Confidence 2334677899999999999997 99999999999999999999999999998 9999999999 99999
Q ss_pred eeecCc
Q 045370 215 EVSNCQ 220 (350)
Q Consensus 215 ~~~~~~ 220 (350)
+++.++
T Consensus 224 ~~~~dg 229 (615)
T 1pgu_A 224 TVGSDR 229 (615)
T ss_dssp EEETTC
T ss_pred EEeCCC
Confidence 888764
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=7e-24 Score=180.74 Aligned_cols=192 Identities=16% Similarity=0.239 Sum_probs=149.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceee--eccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHY--SLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~ 78 (350)
|+||+++ +||+| .|++|+|||+. .+..... ..+|...|.+++|++ +++
T Consensus 31 l~WS~~~-~lAvg-~D~tV~iWd~~---------------------------tg~~~~~~~~~~~~~~V~~v~~~~-~~~ 80 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDNSVYLWSAS---------------------------SGDILQLLQMEQPGEYISSVAWIK-EGN 80 (318)
T ss_dssp EEECTTS-EEEEE-ETTEEEEEETT---------------------------TCCEEEEEECCSTTCCEEEEEECT-TSS
T ss_pred EEECCCC-EEEEE-eCCEEEEEECC---------------------------CCCEEEEEEecCCCCeEEEEEECC-CCC
Confidence 5799886 77766 59999999998 3444443 357888999999966 778
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEe------------------------------------------cCCceeEEEEcC
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQV------------------------------------------YPQAVTAIAFHP 116 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~------------------------------------------~~~~v~~~~~~~ 116 (350)
++++|+.||+|++||+.+++.+..+. |...+..+.+++
T Consensus 81 ~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (318)
T 4ggc_A 81 YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 160 (318)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC
Confidence 99999999999999999876654421 335678888999
Q ss_pred CCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-----EEEEeCCCcEEEEECCCceEE
Q 045370 117 GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-----LISASEDKTVCLWDVTRRVSI 191 (350)
Q Consensus 117 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----l~s~~~dg~v~iwd~~~~~~~ 191 (350)
++.++++++.||.|++||++++... .........|...|.++.++|.+ +++++.++.|++||.......
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAPGEGG------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSCBTTB------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred CCCEEEEEecCcceeEEECCCCccc------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 9999999999999999999865432 12233556788899999999876 456778999999999998877
Q ss_pred EEeccCCCceeEEEEEccCCeEEeeec-CccccccccCC
Q 045370 192 RRFNHKKGVVTNLVVIRQSSLLSEVSN-CQRKLKKDRMP 229 (350)
Q Consensus 192 ~~~~~~~~~v~~l~~~~~~~~l~~~~~-~~~~~~~~~~~ 229 (350)
.... +...+..+.|+|++..++++++ .+..+.+|+..
T Consensus 235 ~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 235 SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 7665 6778999999999998887654 34555566543
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3.5e-25 Score=197.93 Aligned_cols=212 Identities=16% Similarity=0.213 Sum_probs=149.5
Q ss_pred CeecCCC--CEEEEEeCCCcEEEEeCcccccccccccccc--c---------cccccEEEe-eccccccce-eeeccccC
Q 045370 1 MVFSDDG--FLLISGSDDGMICVWSMTRLLKQTSELMHHS--D---------QLDQRLIEM-ELRSLRSLL-HYSLEHKS 65 (350)
Q Consensus 1 i~~s~dg--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--~---------~~~~~~~~~-~~~~~~~~~-~~~~~h~~ 65 (350)
|+|+|++ .+|++|+.||+|++||+.............. + ...-..... ......... ....+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 4799998 7999999999999999985332111000000 0 000000000 000001111 22468999
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCC-CceEEEE--------ecCCceeEEEEcCCC-cEEEEEccCCeEEEEeC
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGS-GILIQTQ--------VYPQAVTAIAFHPGE-QLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~--------~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~ 135 (350)
.|.+++|++ ++.+|++| .|+.|++||+.+ +.....+ .|...|.+++|+|++ .+|++|+.||.|++||+
T Consensus 179 ~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 999999976 67889998 799999999994 4444433 478889999999998 99999999999999999
Q ss_pred CccccccccccccccceeeeccCC------------ceEEEEecCCe--EEEEeCCCcEEEEECCC-ceEEEEeccCCCc
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNG------------SITALAFSASH--LISASEDKTVCLWDVTR-RVSIRRFNHKKGV 200 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~~~~~--l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~ 200 (350)
+.+.... .....+..|.. .|.+++|+|++ |++++. +.|++||+++ ++++..+..|...
T Consensus 257 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 257 RASALCD------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp TTCSSSC------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred cCCcccc------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccc
Confidence 9654311 11234555554 99999999998 888887 9999999997 8888888877542
Q ss_pred ---------------eeEEEEEccCCeEEeeecCcc
Q 045370 201 ---------------VTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 201 ---------------v~~l~~~~~~~~l~~~~~~~~ 221 (350)
+..++|+|++++|++++.++.
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~ 365 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF 365 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE
T ss_pred cccccccccccccccceEEEECCCCCEEEEeccCCE
Confidence 234999999999998877653
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.7e-25 Score=195.84 Aligned_cols=152 Identities=14% Similarity=0.191 Sum_probs=129.4
Q ss_pred ccccCCceEEEEeeCCCcE-EEEEeCCCcEEEEeCC--CCceEEEE---ecCCceeEEEEcCCCcEEEEEccCCeEEEEe
Q 045370 61 LEHKSSVTGLLTISGGTTF-FVSSSLDATCKVWDLG--SGILIQTQ---VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSP 134 (350)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~-l~s~~~d~~v~vwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 134 (350)
..|...|.+++|++ ++.+ +++|+.||.|++||+. ++..+..+ .+...|.+++|+|++.+|++|+.+|.|++|+
T Consensus 99 ~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp -CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 46778899999977 5566 5899999999999999 88777775 5678999999999999999999999999999
Q ss_pred CCccccccccccccccceeeeccCCceEEEEecCC---e--EEEEeCCCcEEEEECCCceEEEE-eccCCCceeEEEEEc
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSAS---H--LISASEDKTVCLWDVTRRVSIRR-FNHKKGVVTNLVVIR 208 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~--l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~l~~~~ 208 (350)
+....... .....+.+|...|++++|+|+ + |++|+.|+.|++||+++++.+.. +.+|...|.+++|+
T Consensus 178 ~~~~~~~~------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 178 INSIPEEK------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp TTSCCCSS------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-
T ss_pred cCCccccc------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-
Confidence 98543211 023366789999999999999 6 99999999999999999988877 55899999999999
Q ss_pred cCCeEEeeecCc
Q 045370 209 QSSLLSEVSNCQ 220 (350)
Q Consensus 209 ~~~~l~~~~~~~ 220 (350)
++++|++++.++
T Consensus 251 d~~~l~s~~~d~ 262 (450)
T 2vdu_B 251 KDYLLLSAGGDD 262 (450)
T ss_dssp STTEEEEEESSS
T ss_pred CCCEEEEEeCCC
Confidence 999999888764
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-25 Score=214.39 Aligned_cols=203 Identities=10% Similarity=0.071 Sum_probs=150.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|||++|+||+.||+|++||+..+..... ..+..... . ....+|...|.+++|+| ++.+|
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~-----------~~~~~~l~---~--~~~~~h~~~V~svafsp-dg~~L 503 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDN-----------ASFEVNLS---R--TLNKAKELAVDKISFAA-ETLEL 503 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTT-----------BCEEEEHH---H--HTTCSSSCCEEEEEEET-TTTEE
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCC-----------ceEEeech---h--hcCCCCCCceeEEEecC-CCCeE
Confidence 47899999999999999999999984311000 00000000 0 00127999999999976 77899
Q ss_pred EEEeCCCcEEEEeCCCCc---------------------------------------------eEEEE-ecCCceeEEEE
Q 045370 81 VSSSLDATCKVWDLGSGI---------------------------------------------LIQTQ-VYPQAVTAIAF 114 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~---------------------------------------------~~~~~-~~~~~v~~~~~ 114 (350)
|+|+.||+|++||+.+++ ++..+ .|.+.|++++|
T Consensus 504 Asgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svaf 583 (902)
T 2oaj_A 504 AVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINN 583 (902)
T ss_dssp EEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEE
T ss_pred EEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEe
Confidence 999999999999998662 23444 38899999999
Q ss_pred cCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee-ccCCceEEEEec-----CC---e--EEEEeCCCcEEEE
Q 045370 115 HPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK-GHNGSITALAFS-----AS---H--LISASEDKTVCLW 183 (350)
Q Consensus 115 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~-----~~---~--l~s~~~dg~v~iw 183 (350)
+|+| +|++|+.|+.|++||++....... .....+. +|...|++++|+ |+ + |++|+.|++|++|
T Consensus 584 SpdG-~lAsgs~D~tv~lwd~~~~~~~~~-----~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 584 SNIG-FVGIAYAAGSLMLIDRRGPAIIYM-----ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITY 657 (902)
T ss_dssp CBTS-EEEEEETTSEEEEEETTTTEEEEE-----EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEE
T ss_pred cCCc-EEEEEeCCCcEEEEECCCCeEEEE-----eehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEE
Confidence 9999 999999999999999875433211 0112454 899999999999 87 3 9999999999999
Q ss_pred EC---CCceEEEEeccC-----CCceeEEE-EE----------------------ccCCeEEeeecCccccccc
Q 045370 184 DV---TRRVSIRRFNHK-----KGVVTNLV-VI----------------------RQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 184 d~---~~~~~~~~~~~~-----~~~v~~l~-~~----------------------~~~~~l~~~~~~~~~~~~~ 226 (350)
|+ .+|+.+..+.+| .++|.+++ |+ +++.+|+++....++|...
T Consensus 658 d~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~ 731 (902)
T 2oaj_A 658 KILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLG 731 (902)
T ss_dssp EEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTT
T ss_pred EEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCc
Confidence 99 788888777655 47788877 76 5666777664445566554
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=4.7e-24 Score=190.26 Aligned_cols=178 Identities=24% Similarity=0.341 Sum_probs=151.3
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
++++++++|++|+.||.|++||+. .......+.+|...|.++.| ++.+++
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~---------------------------~~~~~~~~~~h~~~v~~l~~---~~~~l~ 187 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKN---------------------------TLECKRILTGHTGSVLCLQY---DERVII 187 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESS---------------------------SCCEEEEECCCSSCEEEEEC---CSSEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCC---------------------------CCeEEEEEcCCCCcEEEEEE---CCCEEE
Confidence 467799999999999999999998 46667778899999999988 567899
Q ss_pred EEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 82 SSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 82 s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
+|+.||+|++||+.+++.+..+. |...|.+++|+ +..+++|+.||.|++||+...... .....+.+|...
T Consensus 188 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~-------~~~~~~~~~~~~ 258 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDI-------TLRRVLVGHRAA 258 (435)
T ss_dssp EEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCC-------EEEEEECCCSSC
T ss_pred EEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCc-------eeeeEecCCCCc
Confidence 99999999999999999888764 88899999996 469999999999999999854321 112366788999
Q ss_pred eEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 161 ITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 161 i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
|.++.+.+..+++|+.||.|++||+++++.+..+..|...|.++.| ++.++++++.++
T Consensus 259 v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg 316 (435)
T 1p22_A 259 VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN 316 (435)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS
T ss_pred EEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 9999996666999999999999999999999999989999999888 467888777664
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=6.4e-24 Score=189.90 Aligned_cols=210 Identities=24% Similarity=0.310 Sum_probs=160.3
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccc--------------cccccccEEEeeccccccceeeeccccCCc
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHH--------------SDQLDQRLIEMELRSLRSLLHYSLEHKSSV 67 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 67 (350)
+|+ +++|++|+.||.|++||+.+.........+. +...++.+..++.. ....+..+.+|...|
T Consensus 206 ~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 206 HLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE-TETCLHTLQGHTNRV 282 (445)
T ss_dssp EEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGG-GTEEEEEECCCSSCE
T ss_pred Eec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECC-CCcEeEEecCCCCce
Confidence 453 5679999999999999998643322111110 11123333333332 345666778899999
Q ss_pred eEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 68 TGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 68 ~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
.++.| ++.++++|+.|+.|++||+.+++.+..+. |...+.++.+ +++++++|+.||.|++||++++.
T Consensus 283 ~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~------- 350 (445)
T 2ovr_B 283 YSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ------- 350 (445)
T ss_dssp EEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC-------
T ss_pred EEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc-------
Confidence 99998 56789999999999999999999888764 7777888777 46799999999999999998543
Q ss_pred ccccceeeec---cCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEe-----ccCCCceeEEEEEccCCeEEeeec
Q 045370 147 GEDQHSVLKG---HNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRF-----NHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 147 ~~~~~~~~~~---~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
....+.. |...|++++|+++.+++|+.||.|++||+.+++.+..+ ..|.+.|.+++|+|++.++++++.
T Consensus 351 ---~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 351 ---CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp ---EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred ---EEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc
Confidence 2334444 88999999998877999999999999999999998888 467889999999999999998888
Q ss_pred Ccc---ccccccCC
Q 045370 219 CQR---KLKKDRMP 229 (350)
Q Consensus 219 ~~~---~~~~~~~~ 229 (350)
++. .+.++++.
T Consensus 428 dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 428 NGTEETKLLVLDFD 441 (445)
T ss_dssp SSSSCCEEEEEECC
T ss_pred CCCCccEEEEEECC
Confidence 764 34444443
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=1.3e-23 Score=187.99 Aligned_cols=175 Identities=23% Similarity=0.309 Sum_probs=149.2
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
+++++|++|++|+.||+|++||+. .......+.+|...|.++.|. +.+++
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~---------------------------~~~~~~~~~~h~~~v~~~~~~---~~~l~ 173 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAV---------------------------TGKCLRTLVGHTGGVWSSQMR---DNIII 173 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETT---------------------------TCCEEEECCCCSSCEEEEEEE---TTEEE
T ss_pred EEEEcCCEEEEEECCCcEEEEECC---------------------------CCcEEEEEcCCCCCEEEEEec---CCEEE
Confidence 467789999999999999999998 466677788999999999985 46899
Q ss_pred EEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 82 SSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 82 s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
+|+.||+|++||+.+++.+..+. |...|.++.|+ +..+++|+.||.|++||+.++ .....+.+|...
T Consensus 174 s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~----------~~~~~~~~~~~~ 241 (445)
T 2ovr_B 174 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG----------QCLHVLMGHVAA 241 (445)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC----------CEEEEEECCSSC
T ss_pred EEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC----------cEEEEEcCCccc
Confidence 99999999999999998887764 88889999995 578999999999999999853 344467788899
Q ss_pred eEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 161 ITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 161 i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
|.++.+.+..+++|+.||.|++||+++++.+..+..|...|.+++| ++.++++++.++
T Consensus 242 v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~ 299 (445)
T 2ovr_B 242 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 299 (445)
T ss_dssp EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS
T ss_pred EEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC
Confidence 9999995555999999999999999999999998888889999888 788888777664
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=1.8e-23 Score=186.39 Aligned_cols=174 Identities=23% Similarity=0.341 Sum_probs=151.9
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEE
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVS 82 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 82 (350)
+..++++|++|+.||+|++||+. .......+.+|...|.++.|. +.++++
T Consensus 179 l~~~~~~l~sg~~dg~i~vwd~~---------------------------~~~~~~~~~~h~~~v~~l~~~---~~~l~s 228 (435)
T 1p22_A 179 LQYDERVIITGSSDSTVRVWDVN---------------------------TGEMLNTLIHHCEAVLHLRFN---NGMMVT 228 (435)
T ss_dssp EECCSSEEEEEETTSCEEEEESS---------------------------SCCEEEEECCCCSCEEEEECC---TTEEEE
T ss_pred EEECCCEEEEEcCCCeEEEEECC---------------------------CCcEEEEEcCCCCcEEEEEEc---CCEEEE
Confidence 34488999999999999999998 466677788999999999984 358999
Q ss_pred EeCCCcEEEEeCCCCceEE---E-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 83 SSLDATCKVWDLGSGILIQ---T-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 83 ~~~d~~v~vwd~~~~~~~~---~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
|+.||.|++||+.++.... . ..|...|.+++| +++++++|+.||.|++||++++ .....+.+|.
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~----------~~~~~~~~~~ 296 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC----------EFVRTLNGHK 296 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC----------CEEEEEECCS
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC----------cEEEEEcCCC
Confidence 9999999999999876542 2 358889999999 7889999999999999999853 4445778899
Q ss_pred CceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 159 GSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 159 ~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..|.++.+++..+++|+.||.|++||+++++.+..+.+|...|.+++| ++.+|++++.++
T Consensus 297 ~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg 356 (435)
T 1p22_A 297 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG 356 (435)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCC
Confidence 999999998777999999999999999999999999999999999999 788999888775
No 118
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=1.8e-23 Score=194.32 Aligned_cols=187 Identities=15% Similarity=0.149 Sum_probs=155.0
Q ss_pred CeecC--CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSD--DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~--dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+| ++++|++|+.||.|++||+.++..... ........+..|...|.+++|++ ++.
T Consensus 70 ~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~-------------------~~~~~~~~~~~~~~~v~~~~~s~-~~~ 129 (615)
T 1pgu_A 70 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS-------------------VEVNVKSEFQVLAGPISDISWDF-EGR 129 (615)
T ss_dssp EEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE-------------------EEEEEEEEEECCSSCEEEEEECT-TSS
T ss_pred EEECcCCCCCEEEEecCCCEEEEEeCCCCccccc-------------------ccccccchhhcccccEEEEEEeC-CCC
Confidence 57999 999999999999999999962100000 01244556678999999999966 778
Q ss_pred EEEEEeCC----CcEEEEeCCCCceEEE-EecCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccccccccce
Q 045370 79 FFVSSSLD----ATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS 152 (350)
Q Consensus 79 ~l~s~~~d----~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 152 (350)
++++++.+ +.|.+|| .++.+.. ..|...|.+++|+|++. .+++++.||.|++||+..+ ....
T Consensus 130 ~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----------~~~~ 197 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF----------KFSA 197 (615)
T ss_dssp EEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB----------EEEE
T ss_pred EEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc----------ceee
Confidence 89999887 6889998 4555555 45888999999999998 8999999999999998843 3344
Q ss_pred eeeccCC---ceEEEEecCC-e--EEEEeCCCcEEEEECCCceEEEEe-c---cCCCceeEEEEEccCCeEEeeecCc
Q 045370 153 VLKGHNG---SITALAFSAS-H--LISASEDKTVCLWDVTRRVSIRRF-N---HKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 153 ~~~~~~~---~i~~~~~~~~-~--l~s~~~dg~v~iwd~~~~~~~~~~-~---~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.+.+|.. .|++++|+|+ + |++++.||.|++||+++++.+..+ . .|..+|.+++|+ ++++|++++.++
T Consensus 198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~ 274 (615)
T 1pgu_A 198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA 274 (615)
T ss_dssp EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS
T ss_pred eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC
Confidence 6778888 9999999999 7 999999999999999999999999 5 799999999999 999999888764
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=6.8e-23 Score=176.39 Aligned_cols=176 Identities=19% Similarity=0.187 Sum_probs=131.0
Q ss_pred CeecC--CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC-C
Q 045370 1 MVFSD--DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG-T 77 (350)
Q Consensus 1 i~~s~--dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 77 (350)
|+|+| |+++|++|+.||.|++||+........ .........+..|...|.+++|++.. +
T Consensus 63 ~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 124 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECS------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLG 124 (351)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS------------------SCSEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred EEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc------------------ccCcceeeeecccCCceeEEEEcCCCCC
Confidence 47888 699999999999999999984211100 00113456667899999999987632 6
Q ss_pred cEEEEEeCCCcEEEEeCCCCce----------------------------------------------------------
Q 045370 78 TFFVSSSLDATCKVWDLGSGIL---------------------------------------------------------- 99 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~---------------------------------------------------------- 99 (350)
.++++++.||.|++||+.+++.
T Consensus 125 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 125 LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 7899999999999999865431
Q ss_pred --EEEE-ecCCceeEEEEcCCC----cEEEEEccCCeEEEEeCCccccccc-----------------------------
Q 045370 100 --IQTQ-VYPQAVTAIAFHPGE----QLLFAGSIDGRIFVSPLKFLLLEDH----------------------------- 143 (350)
Q Consensus 100 --~~~~-~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~----------------------------- 143 (350)
...+ .|...|.+++|+|++ .+|++++.||.|++||++.......
T Consensus 205 ~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNT 284 (351)
T ss_dssp EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccc
Confidence 1111 367789999999998 8999999999999999986421110
Q ss_pred -------cccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEe
Q 045370 144 -------FIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRF 194 (350)
Q Consensus 144 -------~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~ 194 (350)
.......+..+.+|...|++++|+|++ |++|+.||.|++||+.+++.+..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 000124455677899999999999998 999999999999999987544433
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=3.7e-22 Score=175.31 Aligned_cols=187 Identities=12% Similarity=0.124 Sum_probs=147.3
Q ss_pred CeecCCCCEE-EEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLL-ISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+|++| ++++.|+.|++||+. .......+..+. .+.+++|++.+..+
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~---------------------------~~~~~~~~~~~~-~v~~~~~spdg~~l 88 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTA---------------------------TNNVIATVPAGS-SPQGVAVSPDGKQV 88 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETT---------------------------TTEEEEEEECSS-SEEEEEECTTSSEE
T ss_pred EEECCCCCEEEEECCCCCeEEEEECC---------------------------CCeEEEEEECCC-CccceEECCCCCEE
Confidence 4799999976 677799999999998 344444444444 89999997744444
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEE-EEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL-FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++++.++.|++||+.+++.+..+.+...+.+++|+|+++.+ ++++.++.|++||+.++.. ...+..+
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----------~~~~~~~- 157 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----------INTVSVG- 157 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----------EEEEECC-
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----------EEEEecC-
Confidence 456667899999999999998888888889999999999977 6788899999999985432 2234444
Q ss_pred CceEEEEecCCe--E-EEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec--Ccccccccc
Q 045370 159 GSITALAFSASH--L-ISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN--CQRKLKKDR 227 (350)
Q Consensus 159 ~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--~~~~~~~~~ 227 (350)
..+.+++|+|++ + ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++. ....+.+|+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 457999999998 4 677889999999999999888877 4568899999999999888874 334444443
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=2.7e-22 Score=173.97 Aligned_cols=202 Identities=10% Similarity=0.056 Sum_probs=133.2
Q ss_pred eecCCCCEE-EEEeCCCcEEEEeCccccccccccccccc-------------cccccEEEeeccccccceeeeccccCCc
Q 045370 2 VFSDDGFLL-ISGSDDGMICVWSMTRLLKQTSELMHHSD-------------QLDQRLIEMELRSLRSLLHYSLEHKSSV 67 (350)
Q Consensus 2 ~~s~dg~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~h~~~v 67 (350)
+|+++++++ ++|+.|++|++||+.++....... .... ..++.+..++.......+..+.. +.
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~ 140 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FG 140 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EE
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CC
Confidence 567778777 567888999999998644322111 0000 01122222222211122222222 22
Q ss_pred eEEEEeeCCCcEEEE--EeCCCcEEEEeCCCCc-----------------eEEEEecCCceeEEEEcCCCcEEEEEccCC
Q 045370 68 TGLLTISGGTTFFVS--SSLDATCKVWDLGSGI-----------------LIQTQVYPQAVTAIAFHPGEQLLFAGSIDG 128 (350)
Q Consensus 68 ~~~~~~~~~~~~l~s--~~~d~~v~vwd~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 128 (350)
..+++ ++ .+++. |+.||.|++||+.++. ......|...|.+++|+|++.+|++|+.||
T Consensus 141 ~~~~~-s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 141 GVCEF-SN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp EEEEE-ET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred ceEEE-Ec--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCC
Confidence 22333 32 34554 6899999999999865 233346899999999999999999999999
Q ss_pred e-EEEEeCCccccccccccccccceeee-c-cCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEE--EE--------
Q 045370 129 R-IFVSPLKFLLLEDHFIVGEDQHSVLK-G-HNGSITALAFSASH--LISASEDKTVCLWDVTRRVSI--RR-------- 193 (350)
Q Consensus 129 ~-i~i~d~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~--~~-------- 193 (350)
. |++||++++ ..+..+. + |...|++++|+|++ |++++.|++|++||++.+... ..
T Consensus 218 ~~v~iwd~~~~----------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 3vu4_A 218 TIIRVFKTEDG----------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK 287 (355)
T ss_dssp SEEEEEETTTC----------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred CEEEEEECCCC----------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence 8 999999854 3344666 5 99999999999998 999999999999999764311 11
Q ss_pred ------------ec-cCCCceeEEEEEccCCeEEeeecCc
Q 045370 194 ------------FN-HKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 194 ------------~~-~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+. .+..+...++|+++++.+++++.++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg 327 (355)
T 3vu4_A 288 YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTR 327 (355)
T ss_dssp CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTT
T ss_pred ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCC
Confidence 11 1122347789999999999887765
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=5.5e-22 Score=176.57 Aligned_cols=180 Identities=10% Similarity=0.038 Sum_probs=150.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|+++++++.|+.|++||+. .......+..|...+.+++|++.+..++
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLK---------------------------TLAYKATVDLTGKWSKILLYDPIRDLVY 227 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETT---------------------------TCCEEEEEECSSSSEEEEEEETTTTEEE
T ss_pred EEEcCCCEEEEEECCCCEEEEEECC---------------------------CceEEEEEcCCCCCeeEEEEcCCCCEEE
Confidence 4689999999999999999999998 4556666678899999999977544444
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEc--------cCCeEEEEeCCccccccccccccccce
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGS--------IDGRIFVSPLKFLLLEDHFIVGEDQHS 152 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~ 152 (350)
++++.|+.|++||+.+++.+..+.....+.+++|+|+++++++++ .||.|++||+.++...
T Consensus 228 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~----------- 296 (433)
T 3bws_A 228 CSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI----------- 296 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE-----------
T ss_pred EEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE-----------
Confidence 666689999999999999888887778899999999999999888 4889999999854322
Q ss_pred eeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 153 VLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 153 ~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
....|...+.+++|+|++ +++++.|+.|++||+.+++.+..+. +...+.+++|+|+++++++++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 297 DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECC
T ss_pred eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecC
Confidence 222455688999999988 5677899999999999999988887 67789999999999988877764
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=2.3e-22 Score=168.33 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=107.6
Q ss_pred eecC---CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc---CCceEEEEeeC
Q 045370 2 VFSD---DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK---SSVTGLLTISG 75 (350)
Q Consensus 2 ~~s~---dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~ 75 (350)
+|+| ++.+|++|+.|++|+|||+. ++..+..+.+|. ..+.+++|+|
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~---------------------------TGk~l~tL~g~~~~v~~v~~vafSp- 236 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLK---------------------------TGQLLKKMHIDDSYQASVCHKAYSE- 236 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETT---------------------------TCCEEEEEECCC---CCCEEEEEEE-
T ss_pred EeeccCCCCceEEEecCCCcEEEEECC---------------------------CCcEEEEEcCCCcceeeeEEEEECC-
Confidence 5677 67899999999999999999 466666666543 3566778877
Q ss_pred CCcEE------------EEEeCCCcEEEEeCCCCceEEEEe------cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCc
Q 045370 76 GTTFF------------VSSSLDATCKVWDLGSGILIQTQV------YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137 (350)
Q Consensus 76 ~~~~l------------~s~~~d~~v~vwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 137 (350)
++.++ ++|+.|++|++||..+++.+..+. |...+.+. +.++.++++++.|++|++||+.+
T Consensus 237 dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 237 MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCC
Confidence 55554 678899999999999998876642 33333333 33478899999999999999995
Q ss_pred cccccccccccccceeeeccCCceE-EEEecCCe--EEEEeCCCcEEEEEC
Q 045370 138 LLLEDHFIVGEDQHSVLKGHNGSIT-ALAFSASH--LISASEDKTVCLWDV 185 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~--l~s~~~dg~v~iwd~ 185 (350)
+ +.+..+.+|...+. +++|+|++ |++|+.|++|+|||+
T Consensus 315 G----------k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 G----------QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C----------SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred C----------cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4 44447778877655 68999998 999999999999996
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=1.4e-21 Score=169.66 Aligned_cols=126 Identities=16% Similarity=0.250 Sum_probs=107.3
Q ss_pred cccceeeeccccCCceEEEEeeCC--CcEEEEEeCCCcEEEEeCCC-CceE-EE-EecCCceeEEEEcCCCcEEEEEccC
Q 045370 53 LRSLLHYSLEHKSSVTGLLTISGG--TTFFVSSSLDATCKVWDLGS-GILI-QT-QVYPQAVTAIAFHPGEQLLFAGSID 127 (350)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~v~vwd~~~-~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d 127 (350)
....+..+.+|.+.|.+++|++.+ +.+|++|+.||.|++||+.+ +... .. ..|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 345666788999999999998754 68999999999999999997 5544 33 4589999999999999999999999
Q ss_pred CeEEEEeCCccccccccccccccceeeeccCCceEEEEe--cCCe--EEEEeCCCcEEEEECCCce
Q 045370 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF--SASH--LISASEDKTVCLWDVTRRV 189 (350)
Q Consensus 128 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~--l~s~~~dg~v~iwd~~~~~ 189 (350)
|.|++||+...... .+..|...|++++| +|++ |++++.||.|++||+++++
T Consensus 108 g~v~iwd~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 108 KTAKMWDLSSNQAI-----------QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp SEEEEEETTTTEEE-----------EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred CcEEEEEcCCCCce-----------eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999854321 35679999999999 8887 9999999999999998654
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=7.6e-21 Score=166.88 Aligned_cols=188 Identities=14% Similarity=0.071 Sum_probs=145.5
Q ss_pred CeecCCCCEEE-EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLI-SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+|++|+ +++.|+.|++||+. .......+. +...+.+++|++.+..+
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~---------------------------~~~~~~~~~-~~~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTT---------------------------SNTVAGTVK-TGKSPLGLALSPDGKKL 130 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETT---------------------------TTEEEEEEE-CSSSEEEEEECTTSSEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECC---------------------------CCeEEEEEe-CCCCcceEEECCCCCEE
Confidence 47999999875 45567999999998 233333333 44578899997644344
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEE-EEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLL-FAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++++.|+.|++||+.+++....+.....+.+++|+|+++++ ++++.++.|++||++++... ..+ .+.
T Consensus 131 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~----------~~~-~~~ 199 (391)
T 1l0q_A 131 YVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI----------DTV-KVE 199 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE----------EEE-ECS
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE----------EEE-ecC
Confidence 478888999999999999998888877888999999999887 57788899999999864322 122 345
Q ss_pred CceEEEEecCCe--EEEEe---CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 159 GSITALAFSASH--LISAS---EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 159 ~~i~~~~~~~~~--l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
..+.+++|+|++ +++++ .++.|++||+.+++.+..+..+. .+.+++|+|+++++++++..+..+.+|+.
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 688999999998 66666 68999999999999998888654 57899999999988655554444555543
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=2.7e-21 Score=172.10 Aligned_cols=188 Identities=16% Similarity=0.123 Sum_probs=147.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccccee-----eeccccCCceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-----YSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~ 75 (350)
++|+|++.++++++.|+.|++||+.+ ..... .+.+|...|.+++| ++
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~---------------------------g~~~~~~~~~~~~~~~~~v~~~~~-~~ 179 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINS---------------------------GQTVRLSPPEKYKKKLGFVETISI-PE 179 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTT---------------------------CCEEEECCCHHHHTTCCEEEEEEE-GG
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCC---------------------------CeEeeecCcccccccCCceeEEEE-cC
Confidence 57999888888888899999999983 22222 34578899999999 55
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEE-EEccCCeEEEEeCCcccccccccccccccee
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLF-AGSIDGRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
++.++++++.|+.|++||+.+++.+..+. +...+.+++|+|+++.++ +++.|+.|++||++++... ..
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~----------~~ 249 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI----------RK 249 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE----------EE
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE----------EE
Confidence 78899999999999999999998888765 677899999999999885 5557999999999854332 23
Q ss_pred eeccCCceEEEEecCCe--EEEEe--------CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 154 LKGHNGSITALAFSASH--LISAS--------EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 154 ~~~~~~~i~~~~~~~~~--l~s~~--------~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
+.. ...+.+++|+|++ +++++ .||.|++||+++++.+..+. |...+.+++|+|+++.+++++..+..+
T Consensus 250 ~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 250 TDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp CCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred ecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEE
Confidence 333 3468999999998 77776 48899999999998887764 556889999999998766555444444
Q ss_pred ccccC
Q 045370 224 KKDRM 228 (350)
Q Consensus 224 ~~~~~ 228 (350)
.+|+.
T Consensus 328 ~v~d~ 332 (433)
T 3bws_A 328 EVYDL 332 (433)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 45543
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.9e-21 Score=172.78 Aligned_cols=192 Identities=14% Similarity=0.125 Sum_probs=138.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|++++++.++++++.|+ +++|+.......... ......+.. ........+...|.+++|++ ++.+|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~v~~l~~sp-dg~~l 107 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKP-----GDDPNKIVD-------KVQGLLVPMKFPIHHLALSC-DNLTL 107 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCT-----TCCTTCEEE-------CCCCEEECCSSCEEEEEECT-TSCEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhccc-----ccCcccccc-------cCccccccCCCcccEEEEcC-CCCEE
Confidence 47899999999999988 999887632110000 000000000 00111234677899999976 66777
Q ss_pred E----EEeCCCcEEEEeCCCC--------ceEEE----EecCCceeEEEEcCC-CcEEEEEccCCeEEEEeCCccccccc
Q 045370 81 V----SSSLDATCKVWDLGSG--------ILIQT----QVYPQAVTAIAFHPG-EQLLFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 81 ~----s~~~d~~v~vwd~~~~--------~~~~~----~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
+ +|+.|+.|++||+.++ +.+.. ..|...|.+++|+|+ +.+|++++.||.|++||++...
T Consensus 108 av~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---- 183 (434)
T 2oit_A 108 SACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---- 183 (434)
T ss_dssp EEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE----
T ss_pred EEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc----
Confidence 7 8889999999998754 22222 237889999999997 7899999999999999998542
Q ss_pred cccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccC-------CCceeEEEEEccCCeEE
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHK-------KGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~ 214 (350)
......+|...|++++|+|++ |++|+.||.|++||++ ++....+..| ...+.+++|++++.+++
T Consensus 184 ------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 184 ------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp ------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred ------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 222445688899999999999 9999999999999998 5555555433 23799999999998886
Q ss_pred eee
Q 045370 215 EVS 217 (350)
Q Consensus 215 ~~~ 217 (350)
+.+
T Consensus 257 ~~~ 259 (434)
T 2oit_A 257 VYA 259 (434)
T ss_dssp EEE
T ss_pred EEc
Confidence 544
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=4e-20 Score=163.60 Aligned_cols=179 Identities=12% Similarity=0.044 Sum_probs=139.4
Q ss_pred CeecCCCCEEEEEeCCC---cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSDDG---MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
++|||||++|++++.|+ .|++||+.+ +.. ..+..|...+.+++|+| ++
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~t---------------------------g~~-~~l~~~~~~~~~~~~sp-dg 234 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLAN---------------------------GAV-RQVASFPRHNGAPAFSP-DG 234 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTT---------------------------CCE-EEEECCSSCEEEEEECT-TS
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCC---------------------------CcE-EEeecCCCcccCEEEcC-CC
Confidence 47999999999999885 999999982 332 34566788899999976 56
Q ss_pred cEEE-EEeCCCc--EEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEcc-CC--eEEEEeCCccccccccccccccc
Q 045370 78 TFFV-SSSLDAT--CKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSI-DG--RIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 78 ~~l~-s~~~d~~--v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
..|+ +++.++. |.+||+.+++......+...+.+++|+|+|++|++++. ++ .|++||+..+. .
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-----------~ 303 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----------P 303 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----------C
T ss_pred CEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-----------E
Confidence 6555 7776665 99999999887655667888999999999999888775 44 67778887532 1
Q ss_pred eeeeccCCceEEEEecCCe--EEEEeCC---CcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 152 SVLKGHNGSITALAFSASH--LISASED---KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~--l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
..+..+...+.+++|+|++ |++++.+ ..|++||+.+++.. .+..+. .+.+++|+|+|++|+.++.+..
T Consensus 304 ~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 304 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETT
T ss_pred EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCC
Confidence 2344566789999999999 6666654 58999999988774 455443 8999999999999988887653
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=5.4e-20 Score=163.42 Aligned_cols=198 Identities=13% Similarity=0.107 Sum_probs=134.1
Q ss_pred CeecCCCCEEE----EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCC
Q 045370 1 MVFSDDGFLLI----SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGG 76 (350)
Q Consensus 1 i~~s~dg~~l~----sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 76 (350)
++|+|+|++|+ +|+.|+.|+|||+.+....... ..........+.+|...|.+++|+|.+
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~----------------~~~~~~~~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ----------------QKRPFAYHKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS----------------SCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC----------------CcceeeeeeccCCCCCceEEEEECCCC
Confidence 57999999999 8889999999999742100000 000011234556799999999998866
Q ss_pred CcEEEEEeCCCcEEEEeCCCCceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 77 TTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+.+|++++.||+|++||++++..... ..|...|.+++|+|+|++|++|+.||.|++||.+ +......... .....
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~---~~~~~ 237 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCP---PFYES 237 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCC---TTCCT
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCC---cccCC
Confidence 88999999999999999998866544 4578899999999999999999999999999998 2211100000 00011
Q ss_pred ccCCceEEEEecCCe-EE--EEeCCC------cEEEEECCCce-----EEEEec-------cCCCceeEEEEEccCCeEE
Q 045370 156 GHNGSITALAFSASH-LI--SASEDK------TVCLWDVTRRV-----SIRRFN-------HKKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~-l~--s~~~dg------~v~iwd~~~~~-----~~~~~~-------~~~~~v~~l~~~~~~~~l~ 214 (350)
.|...|.++.|++++ ++ .++.|| .+++||+++.. ....+. ....+-..+.+.++.++++
T Consensus 238 ~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~ 317 (434)
T 2oit_A 238 DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVL 317 (434)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEE
T ss_pred CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEE
Confidence 344589999999988 33 233443 38999998641 112221 1122333344558888777
Q ss_pred eeec
Q 045370 215 EVSN 218 (350)
Q Consensus 215 ~~~~ 218 (350)
+++.
T Consensus 318 v~s~ 321 (434)
T 2oit_A 318 AASA 321 (434)
T ss_dssp EEET
T ss_pred EecC
Confidence 6665
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=7.7e-19 Score=155.36 Aligned_cols=172 Identities=13% Similarity=0.075 Sum_probs=137.1
Q ss_pred CCEEEEEeCC------CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 7 GFLLISGSDD------GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 7 g~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
+..++.++.+ +.|++||+. ......+..|...+.+++|+| ++..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~----------------------------g~~~~~l~~~~~~v~~~~~Sp-dg~~l 193 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD----------------------------GYNQFVVHRSPQPLMSPAWSP-DGSKL 193 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT----------------------------SCSCEEEEEESSCEEEEEECT-TSSEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC----------------------------CCCCEEEeCCCCcceeeEEcC-CCCEE
Confidence 6677776664 799999987 334566678999999999966 77889
Q ss_pred EEEeCCC---cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEE-EEccCC--eEEEEeCCccccccccccccccceee
Q 045370 81 VSSSLDA---TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLF-AGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 81 ~s~~~d~---~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
++++.++ .|++||+.+++......+...+.+++|+|+|+.|+ +++.++ .|++||+.++.. ..+
T Consensus 194 a~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-----------~~l 262 (415)
T 2hqs_A 194 AYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-----------RQV 262 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----------EEC
T ss_pred EEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-----------EeC
Confidence 9988875 99999999998877677888999999999999887 666655 499999885422 255
Q ss_pred eccCCceEEEEecCCe--EEEEeC-CC--cEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 155 KGHNGSITALAFSASH--LISASE-DK--TVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~--l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
..|...+.+++|+|++ |++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|+.++.+
T Consensus 263 ~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 263 TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECc
Confidence 6788899999999999 776665 44 688889988764 3455567789999999999999987765
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=1.4e-18 Score=145.89 Aligned_cols=180 Identities=13% Similarity=0.048 Sum_probs=133.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccc-ccceeeeccc-cCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSL-RSLLHYSLEH-KSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h-~~~v~~~~~~~~~~~ 78 (350)
++|+|||++|++++ ++.|.+||+. . .........| ...+.+++|++ ++.
T Consensus 47 ~~~spdg~~l~~~~-~~~i~~~d~~---------------------------~~~~~~~~~~~~~~~~~~~~~~sp-dg~ 97 (297)
T 2ojh_A 47 PNWSPDGKYLLLNS-EGLLYRLSLA---------------------------GDPSPEKVDTGFATICNNDHGISP-DGA 97 (297)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEESS---------------------------SCCSCEECCCTTCCCBCSCCEECT-TSS
T ss_pred eEECCCCCEEEEEc-CCeEEEEeCC---------------------------CCCCceEeccccccccccceEECC-CCC
Confidence 47999999999987 7899999998 2 2333333344 46788899866 677
Q ss_pred EEEEEe--CCCcEEEEe--CCCCceEEEEecCCceeEEEEcCCCcEEE-EEccCCeEEEEeCCcccccccccccccccee
Q 045370 79 FFVSSS--LDATCKVWD--LGSGILIQTQVYPQAVTAIAFHPGEQLLF-AGSIDGRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 79 ~l~s~~--~d~~v~vwd--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
++++++ .++...+|. ..++. ...+.....+..++|+|++++|+ +++.++.+.+|++... ......
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~---------~~~~~~ 167 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID---------SGVETR 167 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT---------TCCEEE
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECC---------CCcceE
Confidence 888888 334555555 45554 33444455689999999999877 7778999999987521 122235
Q ss_pred eeccCCceEEEEecCCe--EEEEe-CCCcEEEEECC-CceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 154 LKGHNGSITALAFSASH--LISAS-EDKTVCLWDVT-RRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 154 ~~~~~~~i~~~~~~~~~--l~s~~-~dg~v~iwd~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
+..+...+.++.|+|++ ++.++ .++.+++|++. .+..+..+..|...+.+++|+|++++|+.++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 56677889999999998 55554 58999999886 455667777777889999999999999877765
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=1.5e-18 Score=158.22 Aligned_cols=195 Identities=10% Similarity=0.032 Sum_probs=146.0
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
+|+|++.++++++.|++|.+||.. ...++..+..+.. +.++++++ ++++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~---------------------------t~~~~~~i~~g~~-~~~v~~sp-dg~~l~ 194 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGD---------------------------SKKIVKVIDTGYA-VHISRMSA-SGRYLL 194 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETT---------------------------TCCEEEEEECSTT-EEEEEECT-TSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECC---------------------------CceEEEEEecCcc-cceEEECC-CCCEEE
Confidence 478899999999999999999998 4555555553333 77888855 788999
Q ss_pred EEeCCCcEEEEeC--CCCceEEEEecCCceeEEEEcC----CCcEEEEEcc-CCeEEEEeCCccccccccccccccceee
Q 045370 82 SSSLDATCKVWDL--GSGILIQTQVYPQAVTAIAFHP----GEQLLFAGSI-DGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 82 s~~~d~~v~vwd~--~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
+++.|++|.+||+ .+++++..+.+...+..++|+| +|+++++++. ++.|.+||..+.+...............
T Consensus 195 v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~ 274 (543)
T 1nir_A 195 VIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQ 274 (543)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSC
T ss_pred EECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcc
Confidence 9999999999999 8898888888888899999999 9999999884 8999999988655433211110000000
Q ss_pred eccC-CceEEEEecCCe---EEEEeCCCcEEEEECCCceEEE--EeccCCCceeEEEEEccCCeEEeeecCccccccc
Q 045370 155 KGHN-GSITALAFSASH---LISASEDKTVCLWDVTRRVSIR--RFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 155 ~~~~-~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
..|. ..+..+.++|++ +++...++.|.+||+.+.+.+. .+. +...+..++|+|+|+++++++.....+.+|
T Consensus 275 ~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~ 351 (543)
T 1nir_A 275 TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVI 351 (543)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEE
Confidence 1133 378999999976 7778889999999998765433 444 556788999999999887676544333344
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.80 E-value=7e-18 Score=144.50 Aligned_cols=192 Identities=11% Similarity=0.060 Sum_probs=138.1
Q ss_pred CeecCCCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccc-eeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSL-LHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|||++|++++. ++.|.+||.. .... ......+..+..+++|++ ++.
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~---------------------------~~~~~~~~~~~~~~~~~~~~~s~-dg~ 96 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQ---------------------------LEPPKVVAIQEGQSSMADVDITP-DDQ 96 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECS---------------------------SSSCEEEEEEECSSCCCCEEECT-TSS
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECC---------------------------CCceeEEecccCCCCccceEECC-CCC
Confidence 579999997766665 8999999998 2333 444555556655588866 667
Q ss_pred EEEEEeCCC---cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccCCe-EEEEeCCcccccccccccccccee
Q 045370 79 FFVSSSLDA---TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SIDGR-IFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 79 ~l~s~~~d~---~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
+++++..++ .|.+||+.+++.+..+.....+.+++|+|+|++++++ ..++. |.+|++....... ... . .
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~----~~~-~-~ 170 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF----DTG-Q-E 170 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE----EEE-E-E
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe----ecC-C-c
Confidence 777555553 8999999999998888877788999999999866655 44578 9999987432110 000 1 1
Q ss_pred eeccCCceEEEEecCCe--E-EEEeCCCcEEEEECCCceE---EEEeccCCCceeEEEEEccCCeEEeeecCcccccccc
Q 045370 154 LKGHNGSITALAFSASH--L-ISASEDKTVCLWDVTRRVS---IRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDR 227 (350)
Q Consensus 154 ~~~~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~ 227 (350)
.......+..++|+|++ + +++..++.|++||+.+++. +..+.. ...+..++|+|+|+++++++.....+.+++
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEE
Confidence 12334568999999998 4 4555689999999999887 777764 467789999999998776665443344443
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=2e-18 Score=145.02 Aligned_cols=184 Identities=12% Similarity=0.059 Sum_probs=133.0
Q ss_pred CeecCCCCEEEEEe--CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGS--DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|||++|++++ .++.+.||.++.. ......+. +...+..++|++.+..
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~--------------------------~~~~~~~~-~~~~~~~~~~spdg~~ 142 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPST--------------------------GGTPRLMT-KNLPSYWHGWSPDGKS 142 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETT--------------------------CCCCEECC-SSSSEEEEEECTTSSE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECC--------------------------CCceEEee-cCCCccceEECCCCCE
Confidence 57999999999999 4456777766410 11122222 2334788888664433
Q ss_pred EEEEEeCCCcEEEEeC--CCCceEEEEecCCceeEEEEcCCCcEEEEEc-cCCeEEEEeCCccccccccccccccceeee
Q 045370 79 FFVSSSLDATCKVWDL--GSGILIQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++++++.++.+++|++ .++.......+...+.+++|+|++++|+.++ .++.+.+|++.. .......+.
T Consensus 143 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~---------~~~~~~~~~ 213 (297)
T 2ojh_A 143 FTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV---------DGSSVERIT 213 (297)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET---------TSSCEEECC
T ss_pred EEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC---------CCCCcEEEe
Confidence 4448889999999985 4455544456778899999999999887665 588999998762 122334566
Q ss_pred ccCCceEEEEecCCe--EEEEeCC-----------CcEEEEECCCceE--EEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 156 GHNGSITALAFSASH--LISASED-----------KTVCLWDVTRRVS--IRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~--l~s~~~d-----------g~v~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.|...+.++.|+|++ |++++.+ +.|++||+.+++. +..+..|...+.+++|+|+++.|++++.+.
T Consensus 214 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 677889999999999 6666655 5699999988754 444557788999999999999998887653
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=5.6e-18 Score=154.51 Aligned_cols=183 Identities=11% Similarity=0.048 Sum_probs=138.6
Q ss_pred CeecC----CCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecc----------ccC
Q 045370 1 MVFSD----DGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE----------HKS 65 (350)
Q Consensus 1 i~~s~----dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~~ 65 (350)
|+||| ||++|++++. +++|.|||..+ ..++..+.. |..
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t---------------------------~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGET---------------------------LEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTT---------------------------CCEEEEEECCEECSSSCCEESC
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccc---------------------------cccceeecccCcccCccccccC
Confidence 57999 9999999885 89999999873 222222221 333
Q ss_pred -CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEE--EEecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCccccc
Q 045370 66 -SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQ--TQVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 66 -~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 141 (350)
.+..+.+++.++.++++...++.|.+||+.+++.+. .+.+...+..+.|+|++++++++ ..++.|.+||..++++.
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 788898988777888899999999999998876544 46677788999999999987765 45899999999976543
Q ss_pred cccccccccceeeeccCCceEEEEecCC-e--EEEEe-CCCcEEEEECCC-------ceEEEEeccCCCceeEEEEEccC
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSAS-H--LISAS-EDKTVCLWDVTR-------RVSIRRFNHKKGVVTNLVVIRQS 210 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--l~s~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~l~~~~~~ 210 (350)
...... ...|.+....+ ++|+ + +++++ .|++|.+||+.+ ++++.++..|.+.+..+.|+|++
T Consensus 360 ~~i~~g------~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg 432 (543)
T 1nir_A 360 ALVDVG------KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS 432 (543)
T ss_dssp EEEECS------SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC
T ss_pred EeeccC------CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC
Confidence 221110 01255444333 4676 5 66665 589999999998 89999999988888999999999
Q ss_pred CeEEeee
Q 045370 211 SLLSEVS 217 (350)
Q Consensus 211 ~~l~~~~ 217 (350)
++|++++
T Consensus 433 ~~l~v~~ 439 (543)
T 1nir_A 433 SHLYVDT 439 (543)
T ss_dssp CEEEECC
T ss_pred CcEEEec
Confidence 9999876
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=9.3e-18 Score=159.45 Aligned_cols=209 Identities=10% Similarity=-0.031 Sum_probs=131.6
Q ss_pred CeecCCCCEEEEEeC-CC-----cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee
Q 045370 1 MVFSDDGFLLISGSD-DG-----MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 74 (350)
++|||||++|++++. |+ .|++||+.++....... ......++..+......... .........+.+++|+|
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD-SKVVLPGTETLSDEEKARRE--RQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC-GGGTC----------------------CCEESCCCEECT
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc-hhhcccccccccchhhhhhh--hhhhccccCcceeEECC
Confidence 479999999999998 88 99999998432111000 00000000000000000000 00000013478888865
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCC---ceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccc
Q 045370 75 GGTTFFVSSSLDATCKVWDLGSG---ILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
++++|++++. +.|.+||+.++ .......+...+.+++|+|||++|+.++ ++.|++||+..+...........
T Consensus 119 -Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~-- 193 (741)
T 2ecf_A 119 -DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST-- 193 (741)
T ss_dssp -TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS--
T ss_pred -CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc--
Confidence 7788888875 99999999988 6555556778899999999999999887 56999999986543211000000
Q ss_pred eeeecc--------CCceEEEEecCCe--EEEEeCCC---------------------------------cEEEEECCC-
Q 045370 152 SVLKGH--------NGSITALAFSASH--LISASEDK---------------------------------TVCLWDVTR- 187 (350)
Q Consensus 152 ~~~~~~--------~~~i~~~~~~~~~--l~s~~~dg---------------------------------~v~iwd~~~- 187 (350)
....++ ...+..+.|+|++ |++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 000010 1124789999999 88877665 889999988
Q ss_pred ceEEEEec--cCCCceeEEEEEccCCeEEeeec
Q 045370 188 RVSIRRFN--HKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 188 ~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
++...... .|...+.+++| |||+.|+.++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 77654432 36778999999 99999886654
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=3.9e-17 Score=140.99 Aligned_cols=188 Identities=11% Similarity=0.103 Sum_probs=141.1
Q ss_pred CeecCCCCEEEEEeC-------CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEe
Q 045370 1 MVFSDDGFLLISGSD-------DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTI 73 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 73 (350)
++|+|+|+++++++. ++.|.+||..+ ......+. ....+..++++
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~---------------------------~~~~~~~~-~~~~~~~~~~s 97 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVT---------------------------LEVTQAIH-NDLKPFGATIN 97 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTT---------------------------CCEEEEEE-ESSCCCSEEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC---------------------------CeEEEEEe-cCCCcceEEEC
Confidence 479999998888874 56899999882 33333332 23456778887
Q ss_pred eCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCC----------ceeEEEEcCCCcEEEEEc--cCCeEEEEeCCccccc
Q 045370 74 SGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQ----------AVTAIAFHPGEQLLFAGS--IDGRIFVSPLKFLLLE 141 (350)
Q Consensus 74 ~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~ 141 (350)
+.+..+++++..++.|.+||..+++.+..+.... .+.+++|+|+++++++++ .++.|.+||..++...
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~ 177 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK 177 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE
Confidence 7544466677778999999999999888766432 268899999999888776 4789999999854332
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEecc----CCCceeEEEEEccCCeEEe
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNH----KKGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~~ 215 (350)
..+..+...+.+++|+|++ +++++.++.|.+||+.+++.+..+.. +...+.+++|+|+++++++
T Consensus 178 ----------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 178 ----------TAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp ----------EEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred ----------EEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 2444345567889999998 88888899999999999999888764 4556788999999998887
Q ss_pred eecCccccccc
Q 045370 216 VSNCQRKLKKD 226 (350)
Q Consensus 216 ~~~~~~~~~~~ 226 (350)
++.....+.++
T Consensus 248 ~~~~~~~v~~~ 258 (353)
T 3vgz_A 248 TDSKAAEVLVV 258 (353)
T ss_dssp EESSSSEEEEE
T ss_pred EeCCCCEEEEE
Confidence 77664444444
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=3.1e-17 Score=140.93 Aligned_cols=197 Identities=11% Similarity=0.071 Sum_probs=129.3
Q ss_pred CeecCCCCEEEEEeCC-CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLISGSDD-GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+|++|++++.+ +.|.+|++.... .....+..+..+ ..+..++|++ ++.+
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~-----------------------~~~~~~~~~~~~-~~~~~~~~s~-dg~~ 97 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDD-----------------------GALTFAAESALP-GSLTHISTDH-QGQF 97 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTT-----------------------CCEEEEEEEECS-SCCSEEEECT-TSSE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCC-----------------------CceeeccccccC-CCCcEEEEcC-CCCE
Confidence 5799999999988886 999999986100 001122222223 3788899866 5565
Q ss_pred EEEE-eCCCcEEEEeCC---CCceEEEEecCCceeEEEEcCCCcEEEEEc-cCCeEEEEeCCc-ccccccccccccccee
Q 045370 80 FVSS-SLDATCKVWDLG---SGILIQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPLKF-LLLEDHFIVGEDQHSV 153 (350)
Q Consensus 80 l~s~-~~d~~v~vwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~~~~~~~~~~~ 153 (350)
++++ ..++.|.+||+. .......+.....+.+++|+|+++++++++ .++.|.+||+.. +...... ...
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~------~~~ 171 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD------PAE 171 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE------EEE
T ss_pred EEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec------ccc
Confidence 5554 458899999994 334445555666799999999999888877 899999999975 3221100 001
Q ss_pred ee-ccCCceEEEEecCCe--EE-EEeCCCcEEEEECCC--ceE--EEEec---cC---CCceeEEEEEccCCeEEeeecC
Q 045370 154 LK-GHNGSITALAFSASH--LI-SASEDKTVCLWDVTR--RVS--IRRFN---HK---KGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 154 ~~-~~~~~i~~~~~~~~~--l~-s~~~dg~v~iwd~~~--~~~--~~~~~---~~---~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
.. .....+.+++|+|++ ++ ++..++.|.+||+.. ++. ...+. .. ...+..++|+|++++|+++...
T Consensus 172 ~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 172 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred cccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC
Confidence 11 233578899999998 44 445789999999953 332 22222 11 2356689999999988866644
Q ss_pred ccccccccC
Q 045370 220 QRKLKKDRM 228 (350)
Q Consensus 220 ~~~~~~~~~ 228 (350)
...+.+|+.
T Consensus 252 ~~~i~v~d~ 260 (343)
T 1ri6_A 252 ASLITVFSV 260 (343)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 444444433
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=3.2e-17 Score=140.80 Aligned_cols=195 Identities=11% Similarity=0.092 Sum_probs=130.5
Q ss_pred CeecCCCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+|++|++++. ++.|.+||+..+. ......... ....+.+++|++ ++.+
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~------------------------~~~~~~~~~-~~~~~~~~~~s~-dg~~ 142 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGL------------------------PVGVVDVVE-GLDGCHSANISP-DNRT 142 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTE------------------------EEEEEEEEC-CCTTBCCCEECT-TSSE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCc------------------------ccccccccc-CCCCceEEEECC-CCCE
Confidence 479999998876665 8899999984100 122222222 334578888866 5565
Q ss_pred EEEEe-CCCcEEEEeCCC-CceEEE------EecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCc--ccccccccccc
Q 045370 80 FVSSS-LDATCKVWDLGS-GILIQT------QVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKF--LLLEDHFIVGE 148 (350)
Q Consensus 80 l~s~~-~d~~v~vwd~~~-~~~~~~------~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~~~~~~~~~~~ 148 (350)
+++++ .++.|.+||+.+ ++.... ......+..++|+|++++++++ ..++.|.+|++.. +.....
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~----- 217 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV----- 217 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE-----
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE-----
Confidence 66665 899999999987 654322 1234578899999999977655 4789999999963 211100
Q ss_pred ccceeee---ccCCceEEEEecCCe--EE-EEeCCCcEEEEECC----CceEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 149 DQHSVLK---GHNGSITALAFSASH--LI-SASEDKTVCLWDVT----RRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 149 ~~~~~~~---~~~~~i~~~~~~~~~--l~-s~~~dg~v~iwd~~----~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.....+. .....+.+++|+|++ |+ ++..++.|++||+. +.+.+..+..+.. +.+++|+|++++|++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 218 QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECT
T ss_pred eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecC
Confidence 0000111 113467789999998 44 55578999999998 3455666654444 899999999998888876
Q ss_pred Ccccccccc
Q 045370 219 CQRKLKKDR 227 (350)
Q Consensus 219 ~~~~~~~~~ 227 (350)
+...+.+|.
T Consensus 297 ~~~~v~v~~ 305 (343)
T 1ri6_A 297 KSHHISVYE 305 (343)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEE
Confidence 555555553
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=9.4e-17 Score=138.59 Aligned_cols=192 Identities=9% Similarity=0.019 Sum_probs=138.0
Q ss_pred CeecCCCCEEE-EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC---------CceEE
Q 045370 1 MVFSDDGFLLI-SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS---------SVTGL 70 (350)
Q Consensus 1 i~~s~dg~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~ 70 (350)
++|+|||++++ ++..++.|.+||..+ ......+..+.. .+.++
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAKT---------------------------GEVKGRLVLDDRKRTEEVRPLQPREL 146 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTT---------------------------CCEEEEEESCCCCCCSSCCCCEEEEE
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCCC---------------------------CeeEEEEecCCCccccccCCCCCceE
Confidence 47899999555 555579999999983 333333332221 26788
Q ss_pred EEeeCCCcEEEEEe--CCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccc
Q 045370 71 LTISGGTTFFVSSS--LDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVG 147 (350)
Q Consensus 71 ~~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 147 (350)
+|++ ++.++++++ .++.|.+||..+++....+. +...+.+++|+|+++++++++.++.|.+||..++........
T Consensus 147 ~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~- 224 (353)
T 3vgz_A 147 VADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL- 224 (353)
T ss_dssp EEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-
T ss_pred EECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-
Confidence 8876 455455444 57899999999999988887 566689999999999999999999999999986544321111
Q ss_pred cccceeeeccCCceEEEEecCCe--EEEEe-CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccc
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--LISAS-EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~ 224 (350)
...++...+..++|+|++ +++++ .++.|.+||+.+++.+..+.... ...++|+|+++++++++.....+.
T Consensus 225 -----~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 225 -----LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp -----CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEE
T ss_pred -----CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEE
Confidence 011245678899999998 55444 55999999999999988887433 367999999997776765544444
Q ss_pred cccC
Q 045370 225 KDRM 228 (350)
Q Consensus 225 ~~~~ 228 (350)
+++.
T Consensus 298 ~~d~ 301 (353)
T 3vgz_A 298 VIDA 301 (353)
T ss_dssp EEET
T ss_pred EEEC
Confidence 4443
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=5.8e-18 Score=160.40 Aligned_cols=187 Identities=10% Similarity=0.006 Sum_probs=131.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC---CceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS---SVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~ 77 (350)
++|||||+++++ +.||+|++||+. .+.....+..|.. .|.+++|+| ++
T Consensus 22 ~~~spdg~~~~~-~~dg~i~~~d~~---------------------------~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg 72 (723)
T 1xfd_A 22 AKWISDTEFIYR-EQKGTVRLWNVE---------------------------TNTSTVLIEGKKIESLRAIRYEISP-DR 72 (723)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGG---------------------------GCCCEEEECTTTTTTTTCSEEEECT-TS
T ss_pred cEEcCCCcEEEE-eCCCCEEEEECC---------------------------CCcEEEEeccccccccccceEEECC-CC
Confidence 579999998876 789999999998 3444444455554 489999966 77
Q ss_pred cEEEEEeCC---------CcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccc
Q 045370 78 TFFVSSSLD---------ATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFI 145 (350)
Q Consensus 78 ~~l~s~~~d---------~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 145 (350)
++|++++.+ +.+.+||+.+++...... +...+..++|+|||+.|+.++. +.|++||+..+.......
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 73 EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC
T ss_pred CEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec
Confidence 888888764 778899999987633222 3334889999999999998875 899999998643321100
Q ss_pred cccccceeeeccC---------CceEEEEecCCe--EEEEeCCC----------------------------------cE
Q 045370 146 VGEDQHSVLKGHN---------GSITALAFSASH--LISASEDK----------------------------------TV 180 (350)
Q Consensus 146 ~~~~~~~~~~~~~---------~~i~~~~~~~~~--l~s~~~dg----------------------------------~v 180 (350)
.. .....+.++. ..+.+++|+|++ |++++.|+ .|
T Consensus 152 ~~-~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 152 TG-KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp CC-BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred CC-CCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 00 0000011111 133789999999 77776543 79
Q ss_pred EEEECCCceEEEEeccC------CCceeEEEEEccCCeEEeeec
Q 045370 181 CLWDVTRRVSIRRFNHK------KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 181 ~iwd~~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~~~~~ 218 (350)
++||+.+++....+..+ ...+.+++|+|||+++++.+.
T Consensus 231 ~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp EEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence 99999988765566543 567899999999998876543
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=2.1e-16 Score=136.33 Aligned_cols=204 Identities=13% Similarity=0.096 Sum_probs=133.6
Q ss_pred CeecCCCCEEEEEe-CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLISGS-DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+|+|||++|++++ .++.|.+|++....... .+......... +. ...+...+.+++|+| ++++
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~------------~~~~~~~~~~~-p~--~~~~~~~~~~~~~sp-dg~l 154 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALT------------LTDTVQHSGHG-PR--PEQDGSHIHYTDLTP-DNRL 154 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEE------------EEEEEECCCCC-SS--TTCSSCCEEEEEECT-TSCE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCee------------ecceeecCCCC-CC--ccccCCCceEEEECC-CCcE
Confidence 57999999988888 68999999986210000 00000000000 00 011334578899876 5557
Q ss_pred EEEEeCCCcEEEEeCC-CCceEEE--Ee--cCCceeEEEEcCCCcEEEE-EccCCeEEEEeCCc--cccccccccccccc
Q 045370 80 FVSSSLDATCKVWDLG-SGILIQT--QV--YPQAVTAIAFHPGEQLLFA-GSIDGRIFVSPLKF--LLLEDHFIVGEDQH 151 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~-~~~~~~~--~~--~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~~~~~~~~~~~~ 151 (350)
+++...++.|.+|++. ++..... +. ....+..++|+|+|+++++ ...++.|.+|++.. +.... .
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~--------~ 226 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ--------L 226 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE--------E
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE--------e
Confidence 7777778999999998 5554332 22 2336788999999996665 56689999999874 22110 1
Q ss_pred eeeecc------CCceEEEEecCCe--E-EEEeCCCcEEEEECC---CceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 152 SVLKGH------NGSITALAFSASH--L-ISASEDKTVCLWDVT---RRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 152 ~~~~~~------~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~---~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
..+... ...+..++|+|++ | ++...++.|.+||+. ..+.+..+..+...+..++|+|+|++|++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 111111 1458899999999 4 556678999999997 335666666666678999999999999888776
Q ss_pred ccccccccC
Q 045370 220 QRKLKKDRM 228 (350)
Q Consensus 220 ~~~~~~~~~ 228 (350)
...+.+|.+
T Consensus 307 ~~~v~v~~~ 315 (347)
T 3hfq_A 307 TDNATLYAR 315 (347)
T ss_dssp TTEEEEEEE
T ss_pred CCcEEEEEE
Confidence 555555533
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=2.7e-16 Score=134.63 Aligned_cols=194 Identities=10% Similarity=0.006 Sum_probs=137.4
Q ss_pred CeecCCCCEE-EEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-c----ccCCceEEEEee
Q 045370 1 MVFSDDGFLL-ISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-E----HKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----h~~~v~~~~~~~ 74 (350)
++|+|||+++ ++++.++.|.+||+.+ ......+. . |...+.+++|++
T Consensus 39 ~~~s~dg~~l~v~~~~~~~v~~~d~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~s~ 91 (337)
T 1pby_B 39 PMVAPGGRIAYATVNKSESLVKIDLVT---------------------------GETLGRIDLSTPEERVKSLFGAALSP 91 (337)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT---------------------------CCEEEEEECCBTTEEEECTTCEEECT
T ss_pred eEEcCCCCEEEEEeCCCCeEEEEECCC---------------------------CCeEeeEEcCCcccccccccceEECC
Confidence 4799999765 5566689999999873 22222221 1 233677888865
Q ss_pred CCCcEEEEEe------------CCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccc
Q 045370 75 GGTTFFVSSS------------LDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 75 ~~~~~l~s~~------------~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
++.++++++ .++.|.+||+.+++....+.....+.+++|+|++++++++ ++.|.+||+.++....
T Consensus 92 -dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 92 -DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVE 168 (337)
T ss_dssp -TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEE
T ss_pred -CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEee
Confidence 666677765 5799999999999888887777788999999999988888 6889999998765432
Q ss_pred cccccc-----------c---------------------------------cce------------eeeccCCceEEEEe
Q 045370 143 HFIVGE-----------D---------------------------------QHS------------VLKGHNGSITALAF 166 (350)
Q Consensus 143 ~~~~~~-----------~---------------------------------~~~------------~~~~~~~~i~~~~~ 166 (350)
...... . .+. .+..+...+.+++|
T Consensus 169 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 169 DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred eeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEE
Confidence 111000 0 000 12233446778999
Q ss_pred cCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 167 SASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 167 ~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+|++ ++++ ++.|++||+.+++.+..+.. ...+.+++|+|++++|++++.+ ..+.+|+.
T Consensus 249 s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~-~~i~v~d~ 308 (337)
T 1pby_B 249 NPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGAL-GDLAAYDA 308 (337)
T ss_dssp CTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBS-SEEEEEET
T ss_pred CCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCC-CcEEEEEC
Confidence 9998 5555 78999999999998888774 3567899999999988877554 33444443
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=5.8e-17 Score=159.48 Aligned_cols=177 Identities=14% Similarity=0.048 Sum_probs=143.4
Q ss_pred Ceec-CCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC-CceEEEEeeCCCc
Q 045370 1 MVFS-DDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS-SVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s-~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~ 78 (350)
++|| |||++|++++ ++.|.+|++.. .. ...+..|.. .+..++|+ ++.
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~---------------------------~~-~~~~~~~~~~~~~~~~~s--dg~ 349 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSG---------------------------TY-VLKVPEPLRIRYVRRGGD--TKV 349 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTS---------------------------SB-EEECSCCSCEEEEEECSS--SEE
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCC---------------------------Cc-eEEccCCCcceEEeeeEc--CCC
Confidence 4799 9999999888 78999999872 22 233456666 78889886 777
Q ss_pred EEEEEeCCCcEE-EEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 79 FFVSSSLDATCK-VWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 79 ~l~s~~~d~~v~-vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.+++++.++.+. +||+.++.......+...+..++|+|+|++|++++.++.|++||+.++. ......+|
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~----------~~~~~~~~ 419 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK----------PTVIERSR 419 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC----------EEEEEECS
T ss_pred eEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc----------eEEeccCC
Confidence 888888888888 9999887765545566789999999999999999999999999998543 22244578
Q ss_pred CCceEEEEecCCe--EEEEeCCC----------cEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 158 NGSITALAFSASH--LISASEDK----------TVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 158 ~~~i~~~~~~~~~--l~s~~~dg----------~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
...+.+++|+|++ |++++.++ .|++||+.+++ +..+..|...+.+++|+|+|+.|+.++.+
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 8899999999999 77666543 89999999988 66777788889999999999998877764
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=1.3e-16 Score=147.35 Aligned_cols=203 Identities=10% Similarity=0.020 Sum_probs=137.0
Q ss_pred CeecCCCCEEEEEeC-CCcEEEEeCccccccccccccc-------cccccccEEEeec--cc------------ccccee
Q 045370 1 MVFSDDGFLLISGSD-DGMICVWSMTRLLKQTSELMHH-------SDQLDQRLIEMEL--RS------------LRSLLH 58 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~------------~~~~~~ 58 (350)
++|+|||++||+++. ||+++||++..+... ....+. .-..+..++.... .. .+...
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~- 104 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ- 104 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-
T ss_pred eecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-
Confidence 479999999999887 999999998543221 111111 0011211111111 00 01111
Q ss_pred eeccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC----CeEEEEe
Q 045370 59 YSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID----GRIFVSP 134 (350)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d 134 (350)
.+. ....+...+|++.+...+++.+.++.+.+||+.+++......+.. .+++|+|||++|++++.+ +.|++||
T Consensus 105 ~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d 181 (582)
T 3o4h_A 105 RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSN 181 (582)
T ss_dssp ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEc
Confidence 111 122344557766554444444445556699999998776665554 899999999999988776 7899999
Q ss_pred CCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCC--cEEEEECCCceEEEEeccCCCceeEEE-----
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDK--TVCLWDVTRRVSIRRFNHKKGVVTNLV----- 205 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~l~----- 205 (350)
+.++.. ..+..|...+..++|+|+| |+++..++ .|++||+.+++.. .+..|...+..++
T Consensus 182 ~~~g~~-----------~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 182 LSSGGL-----------RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp TTTCCC-----------EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCCCCc-----------eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 875432 2566788889999999999 77777888 8999999998887 7777777777777
Q ss_pred ---EEccCCeEEeeecCc
Q 045370 206 ---VIRQSSLLSEVSNCQ 220 (350)
Q Consensus 206 ---~~~~~~~l~~~~~~~ 220 (350)
|+|||.++++++.++
T Consensus 250 ~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREG 267 (582)
T ss_dssp EEEECTTSCEEEEEEETT
T ss_pred ceeEcCCCcEEEEEEcCC
Confidence 999997777666554
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=6.1e-16 Score=132.41 Aligned_cols=186 Identities=11% Similarity=0.007 Sum_probs=126.0
Q ss_pred eecCCCCE-EEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 2 VFSDDGFL-LISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg~~-l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
.|++++++ +++++.++.|.+||.. ..........+...+ .++|++ ++.++
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~---------------------------~~~~~~~~~~~~~~~-~~~~s~-dg~~l 54 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTD---------------------------TLEILNQITLGYDFV-DTAITS-DCSNV 54 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETT---------------------------TCCEEEEEECCCCEE-EEEECS-SSCEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCc---------------------------ccceeeeEEccCCcc-eEEEcC-CCCEE
Confidence 46666655 7788889999999998 344444444555556 888866 55544
Q ss_pred -EEEeCCCcEEEEeCCCCce-EEEEecCCceeE-EEEcCCCcEEEEEccCC---eEEEEeCCccccccccccccccceee
Q 045370 81 -VSSSLDATCKVWDLGSGIL-IQTQVYPQAVTA-IAFHPGEQLLFAGSIDG---RIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 81 -~s~~~d~~v~vwd~~~~~~-~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
+++..++.|.+||+.+++. ...+........ ++|+|++++++++..++ .|.+||+..+... ..+
T Consensus 55 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~----------~~~ 124 (331)
T 3u4y_A 55 VVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI----------STI 124 (331)
T ss_dssp EEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE----------EEE
T ss_pred EEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE----------EEE
Confidence 4555589999999999987 666554444455 99999999999655553 8999999864432 233
Q ss_pred eccCCceEEEEecCCe--E-EEEeCCCc-EEEEECCCceEE----EEeccCCCceeEEEEEccCCeEEeeecCccccccc
Q 045370 155 KGHNGSITALAFSASH--L-ISASEDKT-VCLWDVTRRVSI----RRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 155 ~~~~~~i~~~~~~~~~--l-~s~~~dg~-v~iwd~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
.. .....+++|+|++ + +++..++. |.+|++.....+ .........+..++|+|+|+++++++.....+.+|
T Consensus 125 ~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 125 PI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGIL 203 (331)
T ss_dssp EC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEE
Confidence 22 3456899999998 4 44456688 999998753322 11122345679999999999777666554444444
Q ss_pred c
Q 045370 227 R 227 (350)
Q Consensus 227 ~ 227 (350)
+
T Consensus 204 d 204 (331)
T 3u4y_A 204 E 204 (331)
T ss_dssp E
T ss_pred E
Confidence 3
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=6.6e-17 Score=153.59 Aligned_cols=181 Identities=12% Similarity=0.051 Sum_probs=134.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccc--ceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRS--LLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|||||++|++++. +.|.+||+.+ .. ....+..|...+.+++|+| +++
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~---------------------------~~~~~~~~l~~~~~~~~~~~~SP-DG~ 164 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQ---------------------------EGKAAVRQLTHGEGFATDAKLSP-KGG 164 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSS---------------------------CSTTSCCBCCCSSSCEEEEEECT-TSS
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCC---------------------------CCcceEEEcccCCcccccccCCC-CCC
Confidence 579999999999987 9999999982 21 3344566778899999966 778
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCCc-----------------eeEEEEcCCCcEEEEEccCC-------------
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQVYPQA-----------------VTAIAFHPGEQLLFAGSIDG------------- 128 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~~l~~~~~dg------------- 128 (350)
+|+.++ ++.|.+||+.+++.......... +.+++|+|||++|++++.|+
T Consensus 165 ~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p 243 (741)
T 2ecf_A 165 FVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYA 243 (741)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECS
T ss_pred EEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCC
Confidence 888877 56899999998876654332221 47899999999999987765
Q ss_pred --------------------eEEEEeCCc-cccccccccccccceeeeccCCceEEEEecCCe--EEEEeC-----CCcE
Q 045370 129 --------------------RIFVSPLKF-LLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE-----DKTV 180 (350)
Q Consensus 129 --------------------~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~-----dg~v 180 (350)
.|++||+.+ +..... .....|...+..++| |++ |++++. +..|
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~--------~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 244 DRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWI--------DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp SCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEE--------CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred CcccceEeecCCCCCCCCeeEEEEEECCCCCceEEe--------cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 788888875 432110 001147788999999 998 665443 5689
Q ss_pred EEEECCCceEEEEeccCCC----ceeEEEEEccCCeEEeeecCc
Q 045370 181 CLWDVTRRVSIRRFNHKKG----VVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 181 ~iwd~~~~~~~~~~~~~~~----~v~~l~~~~~~~~l~~~~~~~ 220 (350)
++||+.+++....+..+.. .+..++|+|+|+++++++.++
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 358 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG 358 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC
Confidence 9999999987776654433 457899999999887666654
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=6.5e-16 Score=133.00 Aligned_cols=158 Identities=10% Similarity=-0.001 Sum_probs=116.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc-CCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK-SSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~ 79 (350)
+++++++.++++++.++.|.+||..+ ......+..+. ..+..++|++.+..+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~---------------------------~~~~~~~~~~~~~~~~~~~~s~dg~~~ 57 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVAS---------------------------DTVYKSCVMPDKFGPGTAMMAPDNRTA 57 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTT---------------------------TEEEEEEECSSCCSSCEEEECTTSSEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCC---------------------------CcEEEEEecCCCCCCceeEECCCCCEE
Confidence 46889999999999999999999982 33333333222 257788886644345
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecCC-------ceeEEEEcCCCcEEEEEccC------------CeEEEEeCCcccc
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYPQ-------AVTAIAFHPGEQLLFAGSID------------GRIFVSPLKFLLL 140 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~ 140 (350)
++++..++.|.+||+.+++....+.... .+..++|+|+|+++++++.+ +.|.+||+.++..
T Consensus 58 ~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 58 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 5666778999999999998887765432 37899999999999998865 8999999986432
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEec
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
.. ....+ .+...+.+++|+|++ +++++. .|++||+.+++.+..+.
T Consensus 138 ~~-------~~~~~-~~~~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 138 AK-------PVRTF-PMPRQVYLMRAADDGSLYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp BC-------CSEEE-ECCSSCCCEEECTTSCEEEESS--SEEEECTTTCCEEEEEC
T ss_pred cc-------eeeec-cCCCcccceeECCCCcEEEccC--cEEEEeCCCCceecccc
Confidence 21 11122 233468899999999 666544 49999999988877664
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=7.7e-16 Score=132.78 Aligned_cols=192 Identities=13% Similarity=0.124 Sum_probs=125.8
Q ss_pred CeecCCCCEEEEEeC---CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSD---DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
|+|+|||+ |++++. ++.|.+||+..+ ....+.....+...+..++|++ ++
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-------------------------~~~~~~~~~~~~~~p~~~a~sp-dg 97 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-------------------------TAHKLNTVVAPGTPPAYVAVDE-AR 97 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETT-------------------------EEEEEEEEEEESCCCSEEEEET-TT
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCC-------------------------cEEEeeeeecCCCCCEEEEECC-CC
Confidence 57999999 555544 689999998621 1123334455778889999866 66
Q ss_pred cEEEEEe-CCCcEEEEeCC-CCce--EEEEecC----------CceeEEEEcCCCcEEEEEccCCeEEEEeCC-cccccc
Q 045370 78 TFFVSSS-LDATCKVWDLG-SGIL--IQTQVYP----------QAVTAIAFHPGEQLLFAGSIDGRIFVSPLK-FLLLED 142 (350)
Q Consensus 78 ~~l~s~~-~d~~v~vwd~~-~~~~--~~~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~ 142 (350)
+++++++ .++.|.+|++. ++.. +..+.+. ..+.+++|+|+|+.+++...++.|.+|++. .+....
T Consensus 98 ~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 98 QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEE
Confidence 6666666 78999999996 3332 2233322 237889999999966666778999999998 222110
Q ss_pred ccccccccceeeec-cCCceEEEEecCCe--E-EEEeCCCcEEEEECCC--ceE--EEEeccCC------CceeEEEEEc
Q 045370 143 HFIVGEDQHSVLKG-HNGSITALAFSASH--L-ISASEDKTVCLWDVTR--RVS--IRRFNHKK------GVVTNLVVIR 208 (350)
Q Consensus 143 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~--~~~--~~~~~~~~------~~v~~l~~~~ 208 (350)
...+.. ....+..++|+|++ + +++..++.|.+|++.. ++. +..+.... ..+..++|+|
T Consensus 178 --------~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 178 --------QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp --------EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred --------eeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 111122 23367889999998 4 4456788999999874 543 33333222 3588899999
Q ss_pred cCCeEEeeecCcccccccc
Q 045370 209 QSSLLSEVSNCQRKLKKDR 227 (350)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~ 227 (350)
+|++|++++.....+.+|+
T Consensus 250 dG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp TSCEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEE
Confidence 9998865555443344443
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=2.9e-15 Score=129.86 Aligned_cols=153 Identities=7% Similarity=0.044 Sum_probs=104.6
Q ss_pred ceEEEEeeCCCc-EEEEEeCCCcEEEEeCCCCc-------e-------EEEEecCCceeEEEEcCCCcEEEEEc-cCCeE
Q 045370 67 VTGLLTISGGTT-FFVSSSLDATCKVWDLGSGI-------L-------IQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRI 130 (350)
Q Consensus 67 v~~~~~~~~~~~-~l~s~~~d~~v~vwd~~~~~-------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i 130 (350)
+.+++|+| +++ +++++..++.|.+|++.... . .........+..++|+|+|+++++++ .++.|
T Consensus 157 ~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 157 LHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 46788866 565 44555568999999887543 2 11233456688999999999887776 68999
Q ss_pred EEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeC--CCcEEEEECC--Cce--EEEEeccCCCcee
Q 045370 131 FVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE--DKTVCLWDVT--RRV--SIRRFNHKKGVVT 202 (350)
Q Consensus 131 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~--dg~v~iwd~~--~~~--~~~~~~~~~~~v~ 202 (350)
.+|++..+...... .......+...+..++|+|++ |++++. ++.|.+|++. +++ .+..+.. ...+.
T Consensus 236 ~v~~~~~g~~~~~~-----~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 236 IAFRYADGMLDEIQ-----TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp EEEEEETTEEEEEE-----EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred EEEEecCCceEEeE-----EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 99998854322111 111223344567899999999 555554 5899999985 444 4555554 55788
Q ss_pred EEEEEccCCeEEeeecCccccccc
Q 045370 203 NLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 203 ~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
.++|+|+|++|++++.+...+.++
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEE
T ss_pred eEEECCCCCEEEEEECCCCCEEEE
Confidence 999999999998887665444443
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=1.6e-16 Score=156.43 Aligned_cols=187 Identities=9% Similarity=0.050 Sum_probs=142.4
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
+|||||++|+++ .++.|.+||+.... +..+... ..........|...+.+++|+++++.+++
T Consensus 251 ~~SpDG~~la~~-~~~~i~~~d~~~~~----------------l~~l~~~-~~~~~~~~~~~~~~v~~~~~S~pdG~~la 312 (1045)
T 1k32_A 251 HLNTDGRRILFS-KGGSIYIFNPDTEK----------------IEKIEIG-DLESPEDRIISIPSKFAEDFSPLDGDLIA 312 (1045)
T ss_dssp EEEESSSCEEEE-ETTEEEEECTTTCC----------------EEECCCC-CCCBCCSEEEECGGGGEEEEEECGGGCEE
T ss_pred eEcCCCCEEEEE-eCCEEEEecCCceE----------------eeeeccC-cccccccccccccccceeeecCCCCCEEE
Confidence 689999999888 48999999984210 0000000 00001112346678999999724777788
Q ss_pred EEeCCCcEEEEeCCCCceEEEEecCC-ceeEEEEcCCCcEEEEEccCCeEE-EEeCCccccccccccccccceeeeccCC
Q 045370 82 SSSLDATCKVWDLGSGILIQTQVYPQ-AVTAIAFHPGEQLLFAGSIDGRIF-VSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 82 s~~~d~~v~vwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
+++ ++.|.+|++..+.......+.. .+..++|+ +|+.|+.++.++.+. +||+..... ..+.+|..
T Consensus 313 ~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-----------~~l~~~~~ 379 (1045)
T 1k32_A 313 FVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-----------EKFEENLG 379 (1045)
T ss_dssp EEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-----------EECCCCCC
T ss_pred EEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-----------eEecCCcc
Confidence 777 8899999999887665555666 89999999 999999988888888 889874321 13336778
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
.+..++|+|++ |++++.++.|++||+.+++....+..|.+.+.+++|+|+|++|++++.+
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 89999999999 8899999999999999999888777788999999999999999877653
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.71 E-value=1.4e-15 Score=130.18 Aligned_cols=148 Identities=11% Similarity=0.099 Sum_probs=109.6
Q ss_pred CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-cccC-CceEEEEeeCCCcEEEEEeC
Q 045370 8 FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-EHKS-SVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 8 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~~l~s~~~ 85 (350)
++|++++.++.|.+||+.+ ......+. ++.. .+..++|++.+..++++++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~---------------------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 54 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK---------------------------MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK 54 (337)
T ss_dssp EEEEEEETTTEEEEEETTT---------------------------TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT
T ss_pred cEEEEcCCCCeEEEEECCC---------------------------CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC
Confidence 4789999999999999982 33333332 2222 47788887644455667777
Q ss_pred CCcEEEEeCCCCceEEEEecCC------ceeEEEEcCCCcEEEEEc------------cCCeEEEEeCCccccccccccc
Q 045370 86 DATCKVWDLGSGILIQTQVYPQ------AVTAIAFHPGEQLLFAGS------------IDGRIFVSPLKFLLLEDHFIVG 147 (350)
Q Consensus 86 d~~v~vwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~ 147 (350)
++.|.+||+.+++.+..+.... .+..++|+|+++++++++ .++.|.+||+.++...
T Consensus 55 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~------ 128 (337)
T 1pby_B 55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR------ 128 (337)
T ss_dssp TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE------
T ss_pred CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE------
Confidence 8999999999999887766443 688999999999988886 5799999999854322
Q ss_pred cccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
..+.. ...+.+++|+|++ ++++ ++.|++||+.+++.+..+.
T Consensus 129 ----~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 129 ----KAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp ----EEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC
T ss_pred ----EEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee
Confidence 12222 3457788999998 6666 6889999999888776554
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.71 E-value=3.3e-16 Score=148.00 Aligned_cols=143 Identities=14% Similarity=0.145 Sum_probs=106.5
Q ss_pred ceEEEEeeCCCcEEEEEe---------------------------------CCCcEEEEeCCCCceEEEE---ecCCcee
Q 045370 67 VTGLLTISGGTTFFVSSS---------------------------------LDATCKVWDLGSGILIQTQ---VYPQAVT 110 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~---------------------------------~d~~v~vwd~~~~~~~~~~---~~~~~v~ 110 (350)
+.++.|+| ++++|++++ .+..|.+||+.+++..... .+...+.
T Consensus 183 ~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 183 EKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 57888865 778888877 4467999999988765543 3556799
Q ss_pred EEEEcCCCcEEEEEccCC-----eEEEEeCCccccccccccccccceee-eccC---CceEEEEecC--Ce--EEEEeCC
Q 045370 111 AIAFHPGEQLLFAGSIDG-----RIFVSPLKFLLLEDHFIVGEDQHSVL-KGHN---GSITALAFSA--SH--LISASED 177 (350)
Q Consensus 111 ~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~---~~i~~~~~~~--~~--l~s~~~d 177 (350)
+++|+|+|+.|++++.++ .|++||+.++..... .. ..+. ..+.++.|+| ++ +++++.|
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~---------~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT---------LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE---------EEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE---------EEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 999999999999987775 999999986521110 11 1122 2346789999 88 7788889
Q ss_pred CcEEEEECC-CceEEEEeccCCCceeE-EEEEccCCeEEeeecC
Q 045370 178 KTVCLWDVT-RRVSIRRFNHKKGVVTN-LVVIRQSSLLSEVSNC 219 (350)
Q Consensus 178 g~v~iwd~~-~~~~~~~~~~~~~~v~~-l~~~~~~~~l~~~~~~ 219 (350)
+.++||++. ++..+..+..+...+.+ ++|+|+++.|+.++.+
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 999999876 67777788777777877 7999999987766554
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.6e-17 Score=154.90 Aligned_cols=186 Identities=13% Similarity=0.099 Sum_probs=129.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC---CceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS---SVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~ 77 (350)
++|+|||+++++ +.|++|++||+. .+.....+..|.. .+.+++|+| ++
T Consensus 21 ~~~s~dg~~~~~-~~d~~i~~~~~~---------------------------~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg 71 (719)
T 1z68_A 21 PNWISGQEYLHQ-SADNNIVLYNIE---------------------------TGQSYTILSNRTMKSVNASNYGLSP-DR 71 (719)
T ss_dssp CEESSSSEEEEE-CTTSCEEEEESS---------------------------SCCEEEEECHHHHHTTTCSEEEECT-TS
T ss_pred cEECCCCeEEEE-cCCCCEEEEEcC---------------------------CCcEEEEEccccccccceeeEEECC-CC
Confidence 479999965554 469999999998 3343334444433 488999965 77
Q ss_pred cEEEEEeC---------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccc
Q 045370 78 TFFVSSSL---------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGE 148 (350)
Q Consensus 78 ~~l~s~~~---------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 148 (350)
++|++++. ++.|++||+.+++.+........+..++|+|||+.|+.+. ++.|++||+.++..... ....
T Consensus 72 ~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l-~~~~ 149 (719)
T 1z68_A 72 QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI-TFNG 149 (719)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC-CCCC
T ss_pred CeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE-ecCC
Confidence 88888776 7899999999987632122245688999999999999885 78999999986543210 0011
Q ss_pred ccceeeeccCCce---------EEEEecCCe--EEEEeCCC----------------------------------cEEEE
Q 045370 149 DQHSVLKGHNGSI---------TALAFSASH--LISASEDK----------------------------------TVCLW 183 (350)
Q Consensus 149 ~~~~~~~~~~~~i---------~~~~~~~~~--l~s~~~dg----------------------------------~v~iw 183 (350)
.....+.++...| .+++|+|+| |++++.|. .|++|
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 1111222333222 589999999 77776552 78899
Q ss_pred ECCCceEE--------EEeccCCCceeEEEEEccCCeEEeee
Q 045370 184 DVTRRVSI--------RRFNHKKGVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 184 d~~~~~~~--------~~~~~~~~~v~~l~~~~~~~~l~~~~ 217 (350)
|+.+++.. ..+..|...+.+++|+||++++++..
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~ 271 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWL 271 (719)
T ss_dssp ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEE
T ss_pred ECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEe
Confidence 99987642 12335778899999999988777643
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=5.8e-16 Score=146.70 Aligned_cols=183 Identities=10% Similarity=-0.015 Sum_probs=127.3
Q ss_pred CeecCCCCEEEEEeCC---------CcEEEEeCccccccccccccccccccccEEEeeccccccc--eeeeccccCCceE
Q 045370 1 MVFSDDGFLLISGSDD---------GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSL--LHYSLEHKSSVTG 69 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~ 69 (350)
++|||||++|++++.+ +.|.+||+.+ +.. +.....|...+..
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~---------------------------~~~~~l~~~~~~~~~~~~ 118 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH---------------------------GDPQSLDPPEVSNAKLQY 118 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS---------------------------CCCEECCCTTCCSCCCSB
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCC---------------------------CceEeccCCccccccccc
Confidence 4799999999999875 7888999983 222 2222345556888
Q ss_pred EEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEec-CCc------------------eeEEEEcCCCcEEEEEccCC--
Q 045370 70 LLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-PQA------------------VTAIAFHPGEQLLFAGSIDG-- 128 (350)
Q Consensus 70 ~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~------------------v~~~~~~~~~~~l~~~~~dg-- 128 (350)
++|+| +++.|+.++. +.|.+||+.+++....... ... +.+++|+|||++|++++.|+
T Consensus 119 ~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~ 196 (723)
T 1xfd_A 119 AGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSR 196 (723)
T ss_dssp CCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTT
T ss_pred cEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCc
Confidence 88866 6777888775 7999999999877665432 222 37899999999999887553
Q ss_pred --------------------------------eEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEE
Q 045370 129 --------------------------------RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISA 174 (350)
Q Consensus 129 --------------------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~ 174 (350)
.|++||+.++........ ......+...+..++|+|++ +++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~----~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 197 VPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP----PDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp SCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC----CCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred cceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC----CccCCCccceeEEEEEeCCCeEEEEE
Confidence 788888875432110000 00112246789999999999 5454
Q ss_pred eC----CCcEEEEECCCceEEEEecc-CCCce----eEEEEEccCCeEEee
Q 045370 175 SE----DKTVCLWDVTRRVSIRRFNH-KKGVV----TNLVVIRQSSLLSEV 216 (350)
Q Consensus 175 ~~----dg~v~iwd~~~~~~~~~~~~-~~~~v----~~l~~~~~~~~l~~~ 216 (350)
+. +..|++||+.+++....+.. +.+.+ ..++|+|+|+.|+..
T Consensus 273 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred EcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 32 35799999999887766543 33443 378999999977754
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.68 E-value=2.8e-15 Score=129.07 Aligned_cols=193 Identities=10% Similarity=0.010 Sum_probs=130.2
Q ss_pred CeecCCCCEEE-EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecc-c-----cCCceEEEEe
Q 045370 1 MVFSDDGFLLI-SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE-H-----KSSVTGLLTI 73 (350)
Q Consensus 1 i~~s~dg~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~~~~~ 73 (350)
++|+|||++++ ++..++.|.+||+.+ ......+.. + ...+.+++|+
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~s 100 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDT---------------------------CKNTFHANLSSVPGEVGRSMYSFAIS 100 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT---------------------------TEEEEEEESCCSTTEEEECSSCEEEC
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCC---------------------------CcEEEEEEcccccccccccccceEEC
Confidence 47899998654 555789999999983 222222221 1 2347788886
Q ss_pred eCCCcEEEEEeCC------------CcEEEEeCCCCc---eEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 74 SGGTTFFVSSSLD------------ATCKVWDLGSGI---LIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 74 ~~~~~~l~s~~~d------------~~v~vwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
+ +++++++++.+ +.|.+||+.+++ .+....+...+.+++|+|+++ +++++. .|.+||+.++
T Consensus 101 p-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~ 176 (349)
T 1jmx_B 101 P-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTG 176 (349)
T ss_dssp T-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTC
T ss_pred C-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCC
Confidence 5 67777777755 899999998854 334456666789999999999 666543 4999999876
Q ss_pred cccccccccc--cc--------------------------------------------------------ceeeeccCCc
Q 045370 139 LLEDHFIVGE--DQ--------------------------------------------------------HSVLKGHNGS 160 (350)
Q Consensus 139 ~~~~~~~~~~--~~--------------------------------------------------------~~~~~~~~~~ 160 (350)
.......... .. ...+..+...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (349)
T 1jmx_B 177 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTEL 256 (349)
T ss_dssp CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCc
Confidence 5432211110 00 0000112235
Q ss_pred eEEEEecC-Ce--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccccccC
Q 045370 161 ITALAFSA-SH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 161 i~~~~~~~-~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+..++++| ++ ++++ ++.|++||+.+++.+..+.. ...+.+++|+|++++|++++.+ ..+.+|+.
T Consensus 257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~-~~v~v~d~ 323 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTF-NDLAVFNP 323 (349)
T ss_dssp EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBS-SEEEEEET
T ss_pred ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCC-CeEEEEec
Confidence 67788899 88 5555 88999999999999888763 3457899999999988876544 44445544
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.66 E-value=4.4e-15 Score=140.30 Aligned_cols=146 Identities=11% Similarity=0.156 Sum_probs=105.8
Q ss_pred cccCCceEEEEeeCCCcEEEEEeCCC-----cEEEEeCCCC-ceEEEEe--cCC---ceeEEEEcC--CCcEEEEEccCC
Q 045370 62 EHKSSVTGLLTISGGTTFFVSSSLDA-----TCKVWDLGSG-ILIQTQV--YPQ---AVTAIAFHP--GEQLLFAGSIDG 128 (350)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~s~~~d~-----~v~vwd~~~~-~~~~~~~--~~~---~v~~~~~~~--~~~~l~~~~~dg 128 (350)
.|...+.+++|+| +++++++++.++ .|.+||+.++ ....... +.. .+.+++|+| +|+++++++.||
T Consensus 255 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 255 PKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp CTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 5667889999966 777788877775 8999999998 4333332 222 246789999 999999999999
Q ss_pred eEEEEeCCccccccccccccccceeeeccCCceEE-EEecCCe--EE-EEeCCC----cEEEEECCCceEEEEeccCCCc
Q 045370 129 RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA-LAFSASH--LI-SASEDK----TVCLWDVTRRVSIRRFNHKKGV 200 (350)
Q Consensus 129 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~--l~-s~~~dg----~v~iwd~~~~~~~~~~~~~~~~ 200 (350)
.+++|.+.. .......+..+...+.. ++|+|++ |+ +++.++ .|+.||+.++. +..+. +...
T Consensus 334 ~~~l~~~~~---------~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~ 402 (706)
T 2z3z_A 334 WNHLYLYDT---------TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESG 402 (706)
T ss_dssp SCEEEEEET---------TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSS
T ss_pred ccEEEEEEC---------CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCc
Confidence 999998762 12223355667777876 7999998 44 444554 67778887765 44444 5677
Q ss_pred eeEEEEEccCCeEEeeecC
Q 045370 201 VTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 201 v~~l~~~~~~~~l~~~~~~ 219 (350)
+.+++|+|+|++++.++.+
T Consensus 403 ~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 403 MHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEEEEECTTSSEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEecC
Confidence 8999999999988766443
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.65 E-value=2.8e-15 Score=138.43 Aligned_cols=170 Identities=10% Similarity=0.095 Sum_probs=126.9
Q ss_pred eecCCCC--EEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 2 VFSDDGF--LLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 2 ~~s~dg~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
+|+|||+ ++++++ ++.+.+||+.+ +.... +..+.. .+++|+| ++++
T Consensus 116 ~~s~dg~~~~~~s~~-~~~~~l~d~~~---------------------------g~~~~-l~~~~~--~~~~~sp-DG~~ 163 (582)
T 3o4h_A 116 SGVDTGEAVVFTGAT-EDRVALYALDG---------------------------GGLRE-LARLPG--FGFVSDI-RGDL 163 (582)
T ss_dssp EEEECSSCEEEEEEC-SSCEEEEEEET---------------------------TEEEE-EEEESS--CEEEEEE-ETTE
T ss_pred eeCCCCCeEEEEecC-CCCceEEEccC---------------------------CcEEE-eecCCC--ceEEECC-CCCE
Confidence 6888885 344444 44555999872 22222 222222 7888866 7788
Q ss_pred EEEEeCC----CcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCC--eEEEEeCCcccccccccccccccee
Q 045370 80 FVSSSLD----ATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDG--RIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 80 l~s~~~d----~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
+++++.+ +.|.+||+.+++......+...+..++|+|||+.|+++..++ .|++||+.++... .
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-----------~ 232 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-----------D 232 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-----------E
T ss_pred EEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-----------E
Confidence 8887777 789999999998876667888899999999999999888888 8999999854322 3
Q ss_pred eeccCCceEEEE--------ecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCc
Q 045370 154 LKGHNGSITALA--------FSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 154 ~~~~~~~i~~~~--------~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
+.+|...+..+. |+|++ +++++.|+.+++|++ ++... .+.+.+.+++|+ +++++++++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 233 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETT
T ss_pred ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCC
Confidence 345555555555 99998 888899999999999 76655 244678999999 999888777663
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=1.3e-15 Score=144.60 Aligned_cols=184 Identities=14% Similarity=0.110 Sum_probs=126.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCC-----ceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSS-----VTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~ 75 (350)
++|+|||.+++++ ||+|++||+.+ +.....+.+|... ...+.|+|
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~Sp- 71 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEY---------------------------GNSSVFLENSTFDEFGHSINDYSISP- 71 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTT---------------------------CCEEEEECTTTTTTCCSCCCEEEECT-
T ss_pred cEECCCCcEEEEc--CCcEEEEECCC---------------------------CceEEEEechhhhhhcccccceEECC-
Confidence 4799999999886 99999999983 3333344444432 23466655
Q ss_pred CCcEEEEEeCC---------CcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 76 GTTFFVSSSLD---------ATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 76 ~~~~l~s~~~d---------~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
++++++.++.+ +.+.+||+.+++......+...+...+|+|||+.|+.+. ++.|++|++..+.... ...
T Consensus 72 dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~ 149 (740)
T 4a5s_A 72 DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITW 149 (740)
T ss_dssp TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCS
T ss_pred CCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-EcC
Confidence 78888888876 556799999998766556678899999999999998884 7899999998654221 111
Q ss_pred ccccceeeeccCC---------ceEEEEecCCe--EEEEeCCC------------------------------------c
Q 045370 147 GEDQHSVLKGHNG---------SITALAFSASH--LISASEDK------------------------------------T 179 (350)
Q Consensus 147 ~~~~~~~~~~~~~---------~i~~~~~~~~~--l~s~~~dg------------------------------------~ 179 (350)
.......+.++.. ....+.|||+| |+.++.|. .
T Consensus 150 ~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 1111112223322 22358999999 76664321 5
Q ss_pred EEEEECCC---c---eEEEEec------cCCCceeEEEEEccCCeEEeee
Q 045370 180 VCLWDVTR---R---VSIRRFN------HKKGVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 180 v~iwd~~~---~---~~~~~~~------~~~~~v~~l~~~~~~~~l~~~~ 217 (350)
|++||+.+ + +.. .+. .|...+..++|+|||++++...
T Consensus 230 l~v~d~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp EEEEETTSCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCCCCcceEE-EecCCccCCCCCeEEEEEEEeCCCeEEEEEe
Confidence 88899988 7 333 333 2677899999999999666443
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=1.5e-14 Score=125.57 Aligned_cols=197 Identities=12% Similarity=0.047 Sum_probs=128.3
Q ss_pred CeecCCCCE--EEEEe-------------CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee----c
Q 045370 1 MVFSDDGFL--LISGS-------------DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS----L 61 (350)
Q Consensus 1 i~~s~dg~~--l~sg~-------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 61 (350)
++|+|||++ +++++ .+|.+.+|++... +...... .
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~--------------------------g~~~~~~~~~~~ 141 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET--------------------------GKLEKNVQNYEY 141 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT--------------------------CCEEEEEEEEEC
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC--------------------------CcCcceEeeEEe
Confidence 478999994 55553 6899999998621 1111111 1
Q ss_pred cccCCceEEEEeeCCCcEEEEEe-CCCcEEEEeCC-CCceEE--EEe---cCCceeEEEEcCCCcEEEEEcc-CCeEEEE
Q 045370 62 EHKSSVTGLLTISGGTTFFVSSS-LDATCKVWDLG-SGILIQ--TQV---YPQAVTAIAFHPGEQLLFAGSI-DGRIFVS 133 (350)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~s~~-~d~~v~vwd~~-~~~~~~--~~~---~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~ 133 (350)
.+...+.+++|+| ++++++++. .++.|.+||+. +++... .+. +...+..++|+|+|+++++++. ++.|.+|
T Consensus 142 ~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 142 QENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp CTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 2456788999866 666666655 46899999998 776543 233 2566899999999999887764 6899999
Q ss_pred eCCc--cccccccccccccceee----eccCC------ceEEEE-ecCCe--EEEEeCC-C-----cEEEEECC-CceEE
Q 045370 134 PLKF--LLLEDHFIVGEDQHSVL----KGHNG------SITALA-FSASH--LISASED-K-----TVCLWDVT-RRVSI 191 (350)
Q Consensus 134 d~~~--~~~~~~~~~~~~~~~~~----~~~~~------~i~~~~-~~~~~--l~s~~~d-g-----~v~iwd~~-~~~~~ 191 (350)
++.. +..... ...+..+ .+|.. .+..++ |+|++ |++++.+ + .|.+|++. +++..
T Consensus 221 ~~~~~~g~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 221 VIDPATHMPVYT----HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EECTTTCCEEEE----EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred EEeCCCCcEEEc----cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 7652 221100 0000111 12232 588999 99999 6555533 2 89999996 56654
Q ss_pred E---EeccCCCceeEEEEEc---cCCeEEeeecCccccccccC
Q 045370 192 R---RFNHKKGVVTNLVVIR---QSSLLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 192 ~---~~~~~~~~v~~l~~~~---~~~~l~~~~~~~~~~~~~~~ 228 (350)
. ....+...+..++|+| +|++|++++.+...+.+|..
T Consensus 297 ~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 297 KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred EeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 3 2333445678899999 89999988776555545433
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=1.4e-14 Score=125.86 Aligned_cols=181 Identities=10% Similarity=0.176 Sum_probs=120.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCc-cccccccccccccccccccEEEeeccccccceee--eccccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMT-RLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHY--SLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~ 77 (350)
++|+|||++|++++.+ .|.+|++. + +..... ...+ +.+.+++++| ++
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~---------------------------g~~~~~~~~~~~-g~~~~~~~sp-dg 94 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSP---------------------------TEIVHEASHPIG-GHPRANDADT-NT 94 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEET---------------------------TEEEEEEEEECC-SSGGGGCTTS-CC
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCC---------------------------CCEEEeeEeecC-CCCccEEECC-CC
Confidence 4789999999999888 99999986 2 111111 1111 2244566655 56
Q ss_pred c--EEEEEe-------------CCCcEEEEeCC-CCceEEEEe-----cCCceeEEEEcCCCcEEEEEc-cCCeEEEEeC
Q 045370 78 T--FFVSSS-------------LDATCKVWDLG-SGILIQTQV-----YPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPL 135 (350)
Q Consensus 78 ~--~l~s~~-------------~d~~v~vwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~ 135 (350)
+ +++++. .++.+.+|++. .++....+. +...+.+++|+|+|+++++++ .++.|++|++
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 95 RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 6 344553 68999999997 466544332 456799999999999888765 4689999999
Q ss_pred C-ccccccccccccccceeee--ccCCceEEEEecCCe--EEEEeC-CCcEEEEECC--CceEE---EEe---cc----C
Q 045370 136 K-FLLLEDHFIVGEDQHSVLK--GHNGSITALAFSASH--LISASE-DKTVCLWDVT--RRVSI---RRF---NH----K 197 (350)
Q Consensus 136 ~-~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~--l~s~~~-dg~v~iwd~~--~~~~~---~~~---~~----~ 197 (350)
. ++.... ...+. .|...+..++|+|++ +++++. ++.|.+|++. +++.. ..+ .. |
T Consensus 175 ~~~g~~~~--------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 175 LASGEVEL--------VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp CTTSCEEE--------EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred CCCCCEEE--------eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 7 433211 11222 245678999999999 666664 7899999765 55542 122 21 1
Q ss_pred CC------ceeEEE-EEccCCeEEeeecC
Q 045370 198 KG------VVTNLV-VIRQSSLLSEVSNC 219 (350)
Q Consensus 198 ~~------~v~~l~-~~~~~~~l~~~~~~ 219 (350)
.. .+..++ |+|+|++|++++..
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred ccccccccccccEEEECCCCCEEEEECCC
Confidence 21 478999 99999988866543
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=1.7e-15 Score=143.44 Aligned_cols=183 Identities=9% Similarity=0.043 Sum_probs=125.0
Q ss_pred CeecCCCCEEEEEeC---------CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEE
Q 045370 1 MVFSDDGFLLISGSD---------DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLL 71 (350)
Q Consensus 1 i~~s~dg~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 71 (350)
++|||||++|++++. ++.|++||+.+ +..... ......+..++
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~---------------------------g~~~~~-~~l~~~~~~~~ 116 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN---------------------------GEFVRG-NELPRPIQYLC 116 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT---------------------------TEECCS-SCCCSSBCCEE
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCC---------------------------Cccccc-eecCcccccce
Confidence 479999999999876 78999999983 221000 01124578888
Q ss_pred EeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--cCCc-----------------eeEEEEcCCCcEEEEEccCC----
Q 045370 72 TISGGTTFFVSSSLDATCKVWDLGSGILIQTQV--YPQA-----------------VTAIAFHPGEQLLFAGSIDG---- 128 (350)
Q Consensus 72 ~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~-----------------v~~~~~~~~~~~l~~~~~dg---- 128 (350)
|+| +++.|+.+. ++.|++||+.++....... +... ..+++|+|||++|+.++.|.
T Consensus 117 ~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~ 194 (719)
T 1z68_A 117 WSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP 194 (719)
T ss_dssp ECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC
T ss_pred ECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc
Confidence 866 677787775 7899999999887654321 1111 25899999999999987652
Q ss_pred ------------------------------eEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeC
Q 045370 129 ------------------------------RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE 176 (350)
Q Consensus 129 ------------------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~ 176 (350)
.|++||+..+...... .......+.+|...+..++|+|++ +++...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 195 VIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ--EVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp EEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE--ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred eEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee--EccCCccCCCCcceEEEeEEeCCCeEEEEEec
Confidence 7889998865431000 000001344688889999999999 444332
Q ss_pred C----CcEEEEE----CCCceEEEEe----ccCCCcee-----EEEEEccCCeEEe
Q 045370 177 D----KTVCLWD----VTRRVSIRRF----NHKKGVVT-----NLVVIRQSSLLSE 215 (350)
Q Consensus 177 d----g~v~iwd----~~~~~~~~~~----~~~~~~v~-----~l~~~~~~~~l~~ 215 (350)
. ..|++|| +.+++....+ ..|.+.+. .+.|+|+|+.++.
T Consensus 273 ~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 273 RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 2 2488999 8888766555 35666676 8899999996654
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=6.8e-14 Score=119.70 Aligned_cols=188 Identities=12% Similarity=0.099 Sum_probs=133.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee---------ccccCCceEEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS---------LEHKSSVTGLL 71 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~ 71 (350)
|+|+|+|+++++...++.|++||..... ..+..+ ..+...+.+++
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~--------------------------~~~~~~~~~~~~g~~~~~~~~P~~ia 149 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKE--------------------------GPLLILGRSMQPGSDQNHFCQPTDVA 149 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSS--------------------------CCSEEESBTTBCCCSTTCCSSEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCe--------------------------EEEEEecccCCCCCCccccCCCcEEE
Confidence 5789999999988889999999976210 011111 24455788999
Q ss_pred EeeCCCcEEEEEe-CCCcEEEEeCCCCceEEEEecC-----------CceeEEEEcCC-CcEEEEEccCCeEEEEeCCcc
Q 045370 72 TISGGTTFFVSSS-LDATCKVWDLGSGILIQTQVYP-----------QAVTAIAFHPG-EQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 72 ~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~-----------~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~ 138 (350)
+.+.++.++++.+ .++.|++|+ .++..+..+... ..+..++++|+ +.++++...++.|++||..++
T Consensus 150 ~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 150 VEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp ECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred EeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 9775778888876 689999999 557766665421 23889999998 777777778899999998854
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe-EEEE-------eCCCcEEEEECCCceEEEEec---cCCCceeEEEEE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISA-------SEDKTVCLWDVTRRVSIRRFN---HKKGVVTNLVVI 207 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~-------~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~l~~~ 207 (350)
...... ....+...+..++++|.. +++. ..+..|++||+.+++.+..+. .+...+.+++++
T Consensus 229 ~~~~~~--------~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 229 EFVREI--------KHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp CEEEEE--------CCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred cEEEEE--------eccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 432211 112456678899999932 2222 234589999999999998873 566778999999
Q ss_pred ccCCeEEeeecCcccc
Q 045370 208 RQSSLLSEVSNCQRKL 223 (350)
Q Consensus 208 ~~~~~l~~~~~~~~~~ 223 (350)
|+|.++++...+.+++
T Consensus 301 ~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVW 316 (329)
T ss_dssp TTSEEEEEESSSCCEE
T ss_pred CCCCEEEEECCCCEEE
Confidence 9997666555555444
No 164
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=5.5e-14 Score=121.16 Aligned_cols=177 Identities=11% Similarity=0.044 Sum_probs=128.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|++++...+|++|+.++ +++|++............ .... .....+.. |..++| ++.+|
T Consensus 43 Lais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~----------------~~~~-~~~~~lp~-V~~l~f---d~~~L 100 (388)
T 1xip_A 43 LDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST----------------PLTF-KWEKEIPD-VIFVCF---HGDQV 100 (388)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC----------------CCCC-SEEEECTT-EEEEEE---ETTEE
T ss_pred EEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc----------------cccc-eEEeeCCC-eeEEEE---CCCEE
Confidence 47889999999999985 666998743211000000 0011 11223556 999999 56778
Q ss_pred EEEeCCCcEEEEeCCCCceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
+++ .++.|++||+.+...... ..+..++.++.+.+. .+++++.||.|.+||+..+... .+..
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------------~~~~ 163 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------------QLAQ 163 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------------EEEE
T ss_pred EEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------------cccC
Confidence 888 889999999987654443 346677888777654 3888899999999999854321 1446
Q ss_pred ceEEEEecCCeEEEEeCCCcEEEEECCCceE--EEEe------c---cCCCceeEEEEEccCCeEEee
Q 045370 160 SITALAFSASHLISASEDKTVCLWDVTRRVS--IRRF------N---HKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 160 ~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~------~---~~~~~v~~l~~~~~~~~l~~~ 216 (350)
.|+|++|+|+|++.|..||.+++|+...+.. ..++ . +|...|.++.|.+++.++++-
T Consensus 164 ~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 164 NVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 8999999999988999999999999988775 5566 2 367889999999999998863
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=1.3e-12 Score=109.34 Aligned_cols=179 Identities=6% Similarity=0.077 Sum_probs=129.3
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee------ccccCCceEEEEee
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS------LEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~ 74 (350)
|+++++|+++++...++.|.+||... .....+ .++...+.++++.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g----------------------------~~~~~~~~~~~~~~~~~~p~~i~~~~ 86 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEG----------------------------RFKFQFGECGKRDSQLLYPNRVAVVR 86 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTS----------------------------CEEEEECCBSSSTTCBSSEEEEEEET
T ss_pred EEECCCCCEEEEECCCCEEEEECCCC----------------------------cEEEEecccCCCcccccCceEEEEEc
Confidence 47899999888888899999999761 111111 23456778888865
Q ss_pred CCCcEEEEEeC-CCcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccc
Q 045370 75 GGTTFFVSSSL-DATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 75 ~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
+++.++++... ++.|.+|| .+++.+..+. +...+..++++|+++.+++...++.|.+||.... . .
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~----------~ 154 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-V----------L 154 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-E----------E
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-E----------E
Confidence 56776666643 88999999 5677666654 2346899999999998888788899999996521 1 1
Q ss_pred eeee--ccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccC--CCceeEEEEEccCCeEEeeecCc
Q 045370 152 SVLK--GHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHK--KGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 152 ~~~~--~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..+. .+...+..++++|++ +++...++.|++||.. ++.+..+..+ ...+..++++|+|+++++...+.
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 1221 344568999999998 5555678999999984 5566666533 35788999999999888665554
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.56 E-value=4.3e-13 Score=117.21 Aligned_cols=177 Identities=15% Similarity=0.042 Sum_probs=123.2
Q ss_pred eecCCCCEEEEEeC-CCc--EEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 2 VFSDDGFLLISGSD-DGM--ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 2 ~~s~dg~~l~sg~~-dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
+|||||++|+.++. +|. |.+||+. .........++...+..+.|+| ++.
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~---------------------------~g~~~~lt~~~~~~~~~~~~sp-dg~ 93 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLN---------------------------TQVATQLTEGRGDNTFGGFLSP-DDD 93 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETT---------------------------TCEEEECCCSSCBCSSSCEECT-TSS
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCC---------------------------CCceEEeeeCCCCCccceEEcC-CCC
Confidence 69999999999887 674 7777877 2344444445555555667755 778
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCC-ceeEE--EEcCCCcEEEEE----------------------ccCCeEEEE
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQVYPQ-AVTAI--AFHPGEQLLFAG----------------------SIDGRIFVS 133 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~v~~~--~~~~~~~~l~~~----------------------~~dg~i~i~ 133 (350)
.|+.++.++.|.+||+.+++.......+. .+... .++|++..++.. ..+..|++|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 89999989999999999998776655433 33333 348999988743 234689999
Q ss_pred eCCccccccccccccccceeeeccCCceEEEEecC-Ce--EEEEeCC------CcEEEEECCCceEEEEeccCC--Ccee
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA-SH--LISASED------KTVCLWDVTRRVSIRRFNHKK--GVVT 202 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--l~s~~~d------g~v~iwd~~~~~~~~~~~~~~--~~v~ 202 (350)
|+.++.. ..+..+...+..+.|+| ++ |+..+.+ ..|.++|+..+.. ..+..+. ..+.
T Consensus 174 d~~~g~~-----------~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 174 DLKTGES-----------TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCT 241 (388)
T ss_dssp ETTTCCE-----------EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEE
T ss_pred ECCCCce-----------EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccc
Confidence 9885432 24445667789999999 88 6555543 3788888876543 3343333 3578
Q ss_pred EEEEEccCCeEEeeec
Q 045370 203 NLVVIRQSSLLSEVSN 218 (350)
Q Consensus 203 ~l~~~~~~~~l~~~~~ 218 (350)
.+.|+|+|+.|+..+.
T Consensus 242 ~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEECTTSSCEEEEEE
T ss_pred cceECCCCCEEEEEec
Confidence 8999999997765544
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=3.7e-13 Score=116.58 Aligned_cols=182 Identities=12% Similarity=0.124 Sum_probs=114.6
Q ss_pred CeecCCCCEEEEEe-CCCcEEEEeCcccccccccccccccccccc-EEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGS-DDGMICVWSMTRLLKQTSELMHHSDQLDQR-LIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
++|+|||++|++++ .++.|.+|++......... . +.. ..........+...+..++|+| +++
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~----------~~l~~-----~~~~~~~~~~~~~~~~~~~~sp-dg~ 223 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNK----------EKFLT-----KGTPEAFKVAPGSGPRHLIFNS-DGK 223 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC----------CCCEE-----EEEEEEEECCTTCCEEEEEECT-TSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc----------cceee-----cccccceecCCCCCCeEEEEcC-CCC
Confidence 47999999766555 5899999998731100000 0 000 0000111223445667888866 666
Q ss_pred EEEEEe-CCCcEEEEeCCCCceEEE--Ee----cCCceeEEEEcCCCcEEEEEccC--CeEEEEeCCc--cccccccccc
Q 045370 79 FFVSSS-LDATCKVWDLGSGILIQT--QV----YPQAVTAIAFHPGEQLLFAGSID--GRIFVSPLKF--LLLEDHFIVG 147 (350)
Q Consensus 79 ~l~s~~-~d~~v~vwd~~~~~~~~~--~~----~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~--~~~~~~~~~~ 147 (350)
++++++ .++.|.+|++.++..... +. +...+..++|+|+|++|+++..+ +.|.+|++.. +..
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~------- 296 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL------- 296 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE-------
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE-------
Confidence 665555 689999999997765332 22 22346799999999998776654 8999999862 211
Q ss_pred cccceeeeccCCceEEEEecCCe--EEEEe-CCCcEEEE--ECCCceEEEEec-cCCCceeEEEEE
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--LISAS-EDKTVCLW--DVTRRVSIRRFN-HKKGVVTNLVVI 207 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l~s~~-~dg~v~iw--d~~~~~~~~~~~-~~~~~v~~l~~~ 207 (350)
..+..+.. ...+.+++|+|++ |++++ .++.|.+| |..+++...... .+...+.|+.|.
T Consensus 297 -~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 297 -TKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp -EEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred -EEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 11122333 4567899999998 66666 67899996 555777655432 244578888886
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=2.8e-12 Score=112.00 Aligned_cols=178 Identities=12% Similarity=-0.072 Sum_probs=115.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEE-eeCCCcE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLT-ISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~ 79 (350)
++|||||++|+.++.++.|++||+.+ .........+...+....| .++++.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~---------------------------g~~~~~~~~~~~~~~~~~~~~~~dg~~ 138 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLAT---------------------------LEENVVYQVPAEWVGYGTWVANSDCTK 138 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTT---------------------------CCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCC---------------------------CcceeeeechhhcccccceeECCCCCe
Confidence 37999999999999999999999983 2222223333343433333 2446666
Q ss_pred EEEE----------------------eCCCcEEEEeCCCCceEEEEecCCceeEEEEcC-CCcEEEEEccC------CeE
Q 045370 80 FVSS----------------------SLDATCKVWDLGSGILIQTQVYPQAVTAIAFHP-GEQLLFAGSID------GRI 130 (350)
Q Consensus 80 l~s~----------------------~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i 130 (350)
++.. ..+..|.+||+.+++......+...+..+.|+| +|+.|+.+..+ ..|
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (388)
T 3pe7_A 139 LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARM 218 (388)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSE
T ss_pred eccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceE
Confidence 6532 244679999999998777777778899999999 99988876653 377
Q ss_pred EEEeCCccccccccccccccceeeeccC--CceEEEEecCCe--EEEEeC-CC----cEEEEECCCceE--EEEeccCCC
Q 045370 131 FVSPLKFLLLEDHFIVGEDQHSVLKGHN--GSITALAFSASH--LISASE-DK----TVCLWDVTRRVS--IRRFNHKKG 199 (350)
Q Consensus 131 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~--l~s~~~-dg----~v~iwd~~~~~~--~~~~~~~~~ 199 (350)
.++|..... ...+..+. ..+..+.|+|++ |+..+. ++ .|++||+.+++. +..+..+..
T Consensus 219 ~~~d~~~~~-----------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 287 (388)
T 3pe7_A 219 WLINEDGTN-----------MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH 287 (388)
T ss_dssp EEEETTSCC-----------CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred EEEeCCCCc-----------eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence 888776322 11233333 357788999999 544332 22 399999998874 333332100
Q ss_pred ---ceeEEEEEccCCeEEee
Q 045370 200 ---VVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 200 ---~v~~l~~~~~~~~l~~~ 216 (350)
....+.|+|+|+.|+..
T Consensus 288 ~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp EEECTTSSEEEEEECCC---
T ss_pred eeecCCCCeEccCCCcceeE
Confidence 12334799999988754
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.50 E-value=7.8e-12 Score=104.52 Aligned_cols=181 Identities=8% Similarity=0.097 Sum_probs=123.2
Q ss_pred ee-cCCCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccceeee-ccccCCceEEEEeeCCCc
Q 045370 2 VF-SDDGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS-LEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 2 ~~-s~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~ 78 (350)
++ +++|+++++... ++.|.+||.. ...+..+ ..+...+.++++.+ ++.
T Consensus 83 ~~~~~~g~l~v~~~~~~~~i~~~d~~----------------------------g~~~~~~~~~~~~~~~~i~~~~-~g~ 133 (286)
T 1q7f_A 83 AVVRNSGDIIVTERSPTHQIQIYNQY----------------------------GQFVRKFGATILQHPRGVTVDN-KGR 133 (286)
T ss_dssp EEETTTTEEEEEECGGGCEEEEECTT----------------------------SCEEEEECTTTCSCEEEEEECT-TSC
T ss_pred EEEcCCCeEEEEcCCCCCEEEEECCC----------------------------CcEEEEecCccCCCceEEEEeC-CCC
Confidence 56 466766666543 7889999854 2222222 23445678888866 667
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
++++...++.|.+||.. ++.+..+. +...+..++++++++.+++...++.|++||..... +..+.
T Consensus 134 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-----------~~~~~ 201 (286)
T 1q7f_A 134 IIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY-----------LRQIG 201 (286)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE-----------EEEES
T ss_pred EEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE-----------EEEEc
Confidence 77777788999999965 55555554 33468999999999988888889999999975211 11222
Q ss_pred --ccCCceEEEEecCCe--EEEEeCCC-cEEEEECCCceEEEEeccCC--CceeEEEEEccCCeEEeeecCccccccc
Q 045370 156 --GHNGSITALAFSASH--LISASEDK-TVCLWDVTRRVSIRRFNHKK--GVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 156 --~~~~~i~~~~~~~~~--l~s~~~dg-~v~iwd~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
++...+..+++++++ +++...++ .|.+||. +++.+..+..+. ..+.+++++|+|+++++ +.+ ..+.+|
T Consensus 202 ~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~-~~v~v~ 276 (286)
T 1q7f_A 202 GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKD-YRLYIY 276 (286)
T ss_dssp CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT-TEEEEE
T ss_pred cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCC-CeEEEE
Confidence 223578999999998 55555565 9999996 466666665443 24779999999987775 444 334444
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.49 E-value=2.2e-13 Score=129.28 Aligned_cols=180 Identities=9% Similarity=0.026 Sum_probs=119.8
Q ss_pred eecCCCCEEEEEeCC---------CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEE
Q 045370 2 VFSDDGFLLISGSDD---------GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLT 72 (350)
Q Consensus 2 ~~s~dg~~l~sg~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 72 (350)
+|||||++|+.++.+ +.+.+||+.+ +. ...+..|...+...+|
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~---------------------------~~-~~~l~~~~~~~~~~~~ 119 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK---------------------------RQ-LITEERIPNNTQWVTW 119 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT---------------------------TE-ECCSSCCCTTEEEEEE
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCC---------------------------Cc-EEEcccCCCcceeeEE
Confidence 579999999999876 5667999982 22 3345567778999999
Q ss_pred eeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--cCC-----------------ceeEEEEcCCCcEEEEEccCC-----
Q 045370 73 ISGGTTFFVSSSLDATCKVWDLGSGILIQTQV--YPQ-----------------AVTAIAFHPGEQLLFAGSIDG----- 128 (350)
Q Consensus 73 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~-----------------~v~~~~~~~~~~~l~~~~~dg----- 128 (350)
+| +++.|+.+ .|+.|.+|++.++...+... +.. ....+.|+|||+.|+.++.|.
T Consensus 120 SP-dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~ 197 (740)
T 4a5s_A 120 SP-VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPL 197 (740)
T ss_dssp CS-STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCE
T ss_pred CC-CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCce
Confidence 66 67777777 47899999999887554321 111 123589999999998876432
Q ss_pred -------------------------------eEEEEeCCc---cccccccccccccceeee------ccCCceEEEEecC
Q 045370 129 -------------------------------RIFVSPLKF---LLLEDHFIVGEDQHSVLK------GHNGSITALAFSA 168 (350)
Q Consensus 129 -------------------------------~i~i~d~~~---~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~ 168 (350)
.|++||+.+ +... ....+. +|...+..++|+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 198 IEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA--------TSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp EEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC--------CEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred EEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc--------eEEEecCCccCCCCCeEEEEEEEeC
Confidence 355555553 2100 111222 3777899999999
Q ss_pred Ce--EEEEe----CCCcEEEEECCCce----EEE--Ee--ccCCCcee-----EEEEEccCCeEE-eeecC
Q 045370 169 SH--LISAS----EDKTVCLWDVTRRV----SIR--RF--NHKKGVVT-----NLVVIRQSSLLS-EVSNC 219 (350)
Q Consensus 169 ~~--l~s~~----~dg~v~iwd~~~~~----~~~--~~--~~~~~~v~-----~l~~~~~~~~l~-~~~~~ 219 (350)
++ ++... .+..|++||+.+++ +.. .+ ..|.+.+. .+.|+|||+.++ ..+..
T Consensus 270 dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~ 340 (740)
T 4a5s_A 270 QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE 340 (740)
T ss_dssp TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT
T ss_pred CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC
Confidence 99 33332 23479999998876 221 22 34555544 789999999776 55543
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.49 E-value=8.8e-13 Score=123.64 Aligned_cols=175 Identities=11% Similarity=-0.014 Sum_probs=116.0
Q ss_pred CeecCCCCEEEEEeCC----------CcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-cccCCceE
Q 045370 1 MVFSDDGFLLISGSDD----------GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-EHKSSVTG 69 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~ 69 (350)
++|||||++|++++.| ..|++||+.+.... .......+. .+...+..
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~l~~~~~~~~~~ 192 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA----------------------DRSAVRELSDDAHRFVTG 192 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT----------------------CGGGSEESSCSCSSEECC
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc----------------------cCCceeEEEecCCCcccC
Confidence 4799999999998877 58999998720000 002223333 45566777
Q ss_pred EEEeeCCCcEEEEEeCCC--------cEEEEeCC-CC---ceEEEEe-cCCceeEEEEcCCCcEEEEEccCC--eEEEEe
Q 045370 70 LLTISGGTTFFVSSSLDA--------TCKVWDLG-SG---ILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDG--RIFVSP 134 (350)
Q Consensus 70 ~~~~~~~~~~l~s~~~d~--------~v~vwd~~-~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d 134 (350)
++|+| ++++|+.++.++ .|.+||+. ++ ....... +...+..+.|+|+|+++++++.++ .|++||
T Consensus 193 ~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 193 PRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp CEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred ceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 88865 777788776553 79999999 56 4444443 467899999999999888888888 677777
Q ss_pred CCccccccccccccccceeeeccCC--------ceEEEEecCCe--EEEEeCCCcEEEE--ECCCceEEEEeccCCCcee
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNG--------SITALAFSASH--LISASEDKTVCLW--DVTRRVSIRRFNHKKGVVT 202 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~~~--l~s~~~dg~v~iw--d~~~~~~~~~~~~~~~~v~ 202 (350)
+..+.... ....+.. .+..++|+|++ +++++. +.++|| |+.+++ +..+..+...+.
T Consensus 272 ~~~~~~~~----------l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~ 339 (662)
T 3azo_A 272 PATGAATQ----------LCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWA 339 (662)
T ss_dssp TTTCCEEE----------SSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEE
T ss_pred CCCCceee----------cccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEE
Confidence 65432211 1111111 14568888888 777777 888998 666665 667777777777
Q ss_pred EEEEEccCC
Q 045370 203 NLVVIRQSS 211 (350)
Q Consensus 203 ~l~~~~~~~ 211 (350)
.+. ++++.
T Consensus 340 ~~~-s~~~~ 347 (662)
T 3azo_A 340 ATL-TVSGT 347 (662)
T ss_dssp EEE-EEETT
T ss_pred EEE-ecCCC
Confidence 661 45554
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.48 E-value=2.3e-12 Score=111.54 Aligned_cols=87 Identities=9% Similarity=0.194 Sum_probs=67.1
Q ss_pred EEEcCCCcEEEEEcc-----------CCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCC
Q 045370 112 IAFHPGEQLLFAGSI-----------DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDK 178 (350)
Q Consensus 112 ~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg 178 (350)
++|+|+++.++++.. .+.|.+||+.+. +.+..+..+. +.+++|+|++ |++++. +
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----------~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~ 325 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----------QRVARIPGRD--ALSMTIDQQRNLMLTLDG-G 325 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----------EEEEEEECTT--CCEEEEETTTTEEEEECS-S
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC----------cEEEEEecCC--eeEEEECCCCCEEEEeCC-C
Confidence 677888777776543 347888888753 3333555555 8999999999 766666 9
Q ss_pred cEEEEECCCc--eEEEEeccCCCceeEEEEEccCC
Q 045370 179 TVCLWDVTRR--VSIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 179 ~v~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
.|.+||..++ +.+.++..+......++++|+|.
T Consensus 326 ~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 326 NVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999999 99999865667778999999985
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=1.1e-12 Score=122.91 Aligned_cols=187 Identities=10% Similarity=-0.013 Sum_probs=121.3
Q ss_pred eecCCCCEEEEE--eCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCce---------EE
Q 045370 2 VFSDDGFLLISG--SDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVT---------GL 70 (350)
Q Consensus 2 ~~s~dg~~l~sg--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~---------~~ 70 (350)
+|++++-++++. +.++...||.... ......+..|...+. ..
T Consensus 30 ~~s~~~~~~~~~~~~~~~~~~l~~~~~---------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~ 82 (662)
T 3azo_A 30 GAVGDEVWWVAPRPAEAGRATLVRRRA---------------------------DGAEESALPAPWNVRNRVFEYSGFPW 82 (662)
T ss_dssp EEETTEEEEEEEETTTTTEEEEEEECT---------------------------TSCEEESSCTTCCBCCCGGGTCCCCE
T ss_pred EEcCCeEEEEecCcccCCcEEEEEECC---------------------------CCCcceeCCCCccccccccccCCccc
Confidence 578777677777 5588899998641 222233334444444 55
Q ss_pred EEe-eCCCcE-EEEEe-CCCcEEEEeCC--C-CceEEEEe-----cCCceeEEEEcCCCcEEEEEccC----------Ce
Q 045370 71 LTI-SGGTTF-FVSSS-LDATCKVWDLG--S-GILIQTQV-----YPQAVTAIAFHPGEQLLFAGSID----------GR 129 (350)
Q Consensus 71 ~~~-~~~~~~-l~s~~-~d~~v~vwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~ 129 (350)
.|+ ++++.. |+.++ .+..|.+|++. . +....... +...+..++|+|||+.|+.++.+ ..
T Consensus 83 ~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 83 AGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp EEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred eeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 566 256666 55544 35667777766 3 44433333 45578899999999999988876 58
Q ss_pred EEEEeCCccccccccccccccceeee-ccCCceEEEEecCCe--EEEEeCC--------CcEEEEECC-Cc---eEEEEe
Q 045370 130 IFVSPLKFLLLEDHFIVGEDQHSVLK-GHNGSITALAFSASH--LISASED--------KTVCLWDVT-RR---VSIRRF 194 (350)
Q Consensus 130 i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~--l~s~~~d--------g~v~iwd~~-~~---~~~~~~ 194 (350)
|++||+....... ......+. .+...+..++|+|+| |+.++.+ ..|++||+. ++ +.....
T Consensus 163 i~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 163 LAAVPLDGSAAAD-----RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEETTSTTTTC-----GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCcccc-----CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 9999987510000 01112333 455678889999999 7766644 379999999 57 444444
Q ss_pred ccCCCceeEEEEEccCCeEEeeecCc
Q 045370 195 NHKKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 195 ~~~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..+...+..+.|+|||+++++++.++
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTS
T ss_pred CCCCceEcceEECCCCeEEEEECCCC
Confidence 45578899999999999776655543
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=9.7e-12 Score=106.26 Aligned_cols=179 Identities=14% Similarity=0.061 Sum_probs=121.2
Q ss_pred CeecCCCCEEEEEeCCC------------------------cEEEEeCccccccccccccccccccccEEEeeccccccc
Q 045370 1 MVFSDDGFLLISGSDDG------------------------MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSL 56 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (350)
|+|+|+|+++++.+.++ .|.+||.. .+..
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---------------------------~g~~ 81 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---------------------------NAEI 81 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---------------------------TCCE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC---------------------------CCeE
Confidence 57999999999888874 56666654 2233
Q ss_pred eeee-ccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCc-eEEEEe----------cCCceeEEEEcC-CCcEEEE
Q 045370 57 LHYS-LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGI-LIQTQV----------YPQAVTAIAFHP-GEQLLFA 123 (350)
Q Consensus 57 ~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~l~~ 123 (350)
.... ..+-..+.++++.+ ++.++++...++.|++||..... .+..+. +-..+..++++| ++.++++
T Consensus 82 ~~~~~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 82 LQSSGKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVS 160 (329)
T ss_dssp EEEECTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEE
T ss_pred EeccCCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEE
Confidence 2222 24456788898865 67788888889999999986542 444442 123588999999 7888887
Q ss_pred Ec-cCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCC-e--EEEEeCCCcEEEEECCCceEEEEec--cC
Q 045370 124 GS-IDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSAS-H--LISASEDKTVCLWDVTRRVSIRRFN--HK 197 (350)
Q Consensus 124 ~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--l~s~~~dg~v~iwd~~~~~~~~~~~--~~ 197 (350)
.+ .++.|++|+.. +.................++-.....++++|+ + +++...++.|++||..+++.+..+. .+
T Consensus 161 d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 161 DGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp ECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred eCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 76 68999999943 22211110000000000122345889999998 5 6666678899999999899888884 35
Q ss_pred CCceeEEEEEc
Q 045370 198 KGVVTNLVVIR 208 (350)
Q Consensus 198 ~~~v~~l~~~~ 208 (350)
...+.+++|+|
T Consensus 240 ~~~~~~~~~~p 250 (329)
T 3fvz_A 240 GRNVFAISYIP 250 (329)
T ss_dssp TTCEEEEEEET
T ss_pred CCCcceeeecC
Confidence 56788999999
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=7.2e-12 Score=105.34 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=124.3
Q ss_pred CeecCCCC-EEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGF-LLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|+|+|+ +++++..++.|..||..+ . ...+..+...+.++++.+ ++.+
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~---------------------------~--~~~~~~~~~~~~~l~~~~-dg~l 82 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDG---------------------------Q--LSPEMHPSHHQNGHCLNK-QGHL 82 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTS---------------------------C--EEEEESSCSSEEEEEECT-TCCE
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCC---------------------------C--eEEEECCCCCcceeeECC-CCcE
Confidence 47999998 788888899999999882 2 344455667788998866 6677
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEe-----cCCceeEEEEcCCCcEEEE----Ecc-------------CCeEEEEeCCc
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQV-----YPQAVTAIAFHPGEQLLFA----GSI-------------DGRIFVSPLKF 137 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~ 137 (350)
+++...++.|.+||..+++...... ....+..++++|+|+++++ |+. .+.|..++..
T Consensus 83 ~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (296)
T 3e5z_A 83 IACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD- 161 (296)
T ss_dssp EEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-
T ss_pred EEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-
Confidence 7776667899999998887654432 1234678999999998887 331 3456666544
Q ss_pred cccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECC-CceE---EEEeccCCCceeEEEEEccCC
Q 045370 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVT-RRVS---IRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~-~~~~---~~~~~~~~~~v~~l~~~~~~~ 211 (350)
+. ...+..+......++|+|++ +++.+.++.|++||+. +++. ...+..+.+.+.+++++++|+
T Consensus 162 g~-----------~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 162 GT-----------LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp SC-----------EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred CC-----------EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 11 11334455677899999998 7666678899999997 4544 233333455678999999999
Q ss_pred eEEee
Q 045370 212 LLSEV 216 (350)
Q Consensus 212 ~l~~~ 216 (350)
+.++.
T Consensus 231 l~v~~ 235 (296)
T 3e5z_A 231 IWASA 235 (296)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87755
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=4.3e-11 Score=102.29 Aligned_cols=183 Identities=13% Similarity=0.138 Sum_probs=122.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+|+|++++++..++.|.+||..+ .........+...+.++++.+ ++.++
T Consensus 50 ~~~~~~g~l~~~~~~~~~i~~~d~~~---------------------------~~~~~~~~~~~~~~~~i~~~~-dg~l~ 101 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFEGNIFKINPET---------------------------KEIKRPFVSHKANPAAIKIHK-DGRLF 101 (333)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTT---------------------------CCEEEEEECSSSSEEEEEECT-TSCEE
T ss_pred cEECCCCCEEEEECCCCEEEEEeCCC---------------------------CcEEEEeeCCCCCcceEEECC-CCcEE
Confidence 46889999888888899999999872 222222224567899998865 56777
Q ss_pred EEEeCC----CcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEcc------CCeEEEEeCCccccccccccc
Q 045370 81 VSSSLD----ATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSI------DGRIFVSPLKFLLLEDHFIVG 147 (350)
Q Consensus 81 ~s~~~d----~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 147 (350)
++...+ +.|.+||..++.....+. ....+..++++|+|+.+++... .+.|..+|.......
T Consensus 102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~------ 175 (333)
T 2dg1_A 102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT------ 175 (333)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE------
T ss_pred EEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE------
Confidence 766665 689999998877654432 3456899999999987776653 356666665532211
Q ss_pred cccceeeeccCCceEEEEecCCe--E-EEEeCCCcEEEEECCC-ceEEE--------EeccCCCceeEEEEEccCCeEEe
Q 045370 148 EDQHSVLKGHNGSITALAFSASH--L-ISASEDKTVCLWDVTR-RVSIR--------RFNHKKGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~-~~~~~--------~~~~~~~~v~~l~~~~~~~~l~~ 215 (350)
.+..+...+..++|+|++ + ++.+.++.|++||+.+ +..+. .+..+ ..+..++++++|.++++
T Consensus 176 -----~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~ 249 (333)
T 2dg1_A 176 -----PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVA 249 (333)
T ss_dssp -----EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEE
T ss_pred -----EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEE
Confidence 222233457889999997 4 4445678999999963 32221 11222 46788999999998876
Q ss_pred eecCcccc
Q 045370 216 VSNCQRKL 223 (350)
Q Consensus 216 ~~~~~~~~ 223 (350)
...+..+.
T Consensus 250 ~~~~~~v~ 257 (333)
T 2dg1_A 250 MYGQGRVL 257 (333)
T ss_dssp EETTTEEE
T ss_pred EcCCCEEE
Confidence 65544333
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=1.6e-11 Score=103.16 Aligned_cols=184 Identities=11% Similarity=0.014 Sum_probs=125.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee---c-cccCCceEEEEeeCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS---L-EHKSSVTGLLTISGG 76 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~h~~~v~~~~~~~~~ 76 (350)
|+|+|+|+++++...++.|.+||..+ +...... . .....+.++++.+ +
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~---------------------------g~~~~~~~~~~~~~~~~~~~i~~d~-~ 125 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPG---------------------------GEWESIADSFEGKKLNSPNDVCLAP-D 125 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTT---------------------------CCEEEEECEETTEECCCCCCEEECT-T
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCC---------------------------CcEEEEeeccCCCCCCCCCCEEECC-C
Confidence 47899999888877788999999852 1111111 1 1123466788865 6
Q ss_pred CcEEEE----Ee-------------CCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCC-cc
Q 045370 77 TTFFVS----SS-------------LDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLK-FL 138 (350)
Q Consensus 77 ~~~l~s----~~-------------~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~ 138 (350)
+.++++ |+ ..+.|..++.. ++......+......++|+|+++.+++.+.++.|++|++. .+
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g 204 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG 204 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC
Confidence 777776 32 13455556655 5554445556677899999999988777788999999986 22
Q ss_pred cc-ccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEE-ccCCeEEe
Q 045370 139 LL-EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI-RQSSLLSE 215 (350)
Q Consensus 139 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~~ 215 (350)
.. .. ...+..+...+.++++++++ +..+. ++.|.+||.. ++.+..+..+.. +++++|. |+++.|.+
T Consensus 205 ~~~~~--------~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v 273 (296)
T 3e5z_A 205 ETEYQ--------GVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYM 273 (296)
T ss_dssp CEEEE--------EEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEE
T ss_pred cCcCC--------CeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEE
Confidence 21 10 01112345567789999999 66666 8899999987 777888876666 8999995 88888886
Q ss_pred eecCcccccc
Q 045370 216 VSNCQRKLKK 225 (350)
Q Consensus 216 ~~~~~~~~~~ 225 (350)
++.+ .++++
T Consensus 274 ~t~~-~l~~~ 282 (296)
T 3e5z_A 274 TVST-EFWSI 282 (296)
T ss_dssp EETT-EEEEE
T ss_pred EcCC-eEEEE
Confidence 6654 44443
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.43 E-value=3.1e-11 Score=104.43 Aligned_cols=106 Identities=7% Similarity=-0.032 Sum_probs=77.7
Q ss_pred CCCCEEEEEe------CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 5 DDGFLLISGS------DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 5 ~dg~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
+++++++... .|+.|.+||.. .......+..+..+ .+++++ +++
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~---------------------------t~~~~~~i~~g~~p--~i~~sp-dg~ 62 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYT---------------------------NGKFLGMVPTAFNG--HVQVSN-DGK 62 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETT---------------------------TCCEEEEEECCEEE--EEEECT-TSS
T ss_pred CCCCEEEEECCCCCccccCeEEEEECC---------------------------CCeEEEEecCCCCC--ceEECC-CCC
Confidence 4667776654 37899999987 34444445455444 788865 677
Q ss_pred EEEEEe----------CCCcEEEEeCCCCceEEEEec-------CCceeEEEEcCCCcEEEEEcc--CCeEEEEeCCccc
Q 045370 79 FFVSSS----------LDATCKVWDLGSGILIQTQVY-------PQAVTAIAFHPGEQLLFAGSI--DGRIFVSPLKFLL 139 (350)
Q Consensus 79 ~l~s~~----------~d~~v~vwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~ 139 (350)
+++++. .++.|.+||..+++.+..+.. ......++++|+|++|+++.. ++.|.+||+.+.+
T Consensus 63 ~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 63 KIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp EEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE
T ss_pred EEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc
Confidence 777765 367899999999988887653 245778999999999998874 5799999987654
Q ss_pred c
Q 045370 140 L 140 (350)
Q Consensus 140 ~ 140 (350)
.
T Consensus 143 ~ 143 (361)
T 2oiz_A 143 Y 143 (361)
T ss_dssp E
T ss_pred E
Confidence 4
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=1.2e-11 Score=102.69 Aligned_cols=181 Identities=10% Similarity=0.040 Sum_probs=130.7
Q ss_pred CCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc-CCceEEEEeeCCCcEEEEE
Q 045370 5 DDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK-SSVTGLLTISGGTTFFVSS 83 (350)
Q Consensus 5 ~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~ 83 (350)
..+++|++++.|+.|.+||.+ ++..+..+..+. ..+.++.+.+ ++++++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~---------------------------tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv-- 52 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKD---------------------------TKEIVWEYPLEKGWECNSVAATK-AGEILF-- 52 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETT---------------------------TTEEEEEEECCTTCCCCEEEECT-TSCEEE--
T ss_pred CCCcEEEeeCCCCEEEEEECC---------------------------CCeEEEEeCCCccCCCcCeEECC-CCCEEE--
Confidence 346799999999999999997 355555555554 4678887755 677777
Q ss_pred eCCCcEEEEeCCCCceEEEEecC--CceeEEEEcCCCcEEEEEcc-CCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 84 SLDATCKVWDLGSGILIQTQVYP--QAVTAIAFHPGEQLLFAGSI-DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 84 ~~d~~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
+.++.|..||. +++.+..+... ..+.++.+.++|+++++.+. ++.|..+|. .++......... ....+...
T Consensus 53 s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~----~~~~~~~~ 126 (276)
T 3no2_A 53 SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET----GIERPHAQ 126 (276)
T ss_dssp ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC----SCSSGGGS
T ss_pred eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC----CCCccccc
Confidence 45788999999 79888887753 47889999999999999887 778888875 333222211110 00122223
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
...+.+.+++ +++...++.|..||.. |+.+.++... ..+.++.+.++|.++++++.+.++.
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~ 189 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFV 189 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEE
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEE
Confidence 4455678888 7788889999999998 9999998754 4566788899999988776665443
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.42 E-value=2.1e-11 Score=100.87 Aligned_cols=184 Identities=7% Similarity=-0.014 Sum_probs=123.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+++++|+++++.. ++.|.+||... .............+.++++.+ ++.++
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~---------------------------~~~~~~~~~~~~~p~~i~~~~-~g~l~ 122 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGS---------------------------NNQTVLPFDGLNYPEGLAVDT-QGAVY 122 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTC---------------------------SCCEECCCCSCSSEEEEEECT-TCCEE
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCC---------------------------ceEeeeecCCcCCCcceEECC-CCCEE
Confidence 46889998666665 88999998772 111111112235678888866 66777
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++...++.|.+|+..+....... .....+..++++++++.+++...++.|.+||........ ....+..
T Consensus 123 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~----------~~~~~~~ 192 (270)
T 1rwi_B 123 VADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV----------LPFTDIT 192 (270)
T ss_dssp EEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE----------CCCSSCC
T ss_pred EEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe----------ecccCCC
Confidence 77777889999987665443321 223467899999999977777778999999987432111 1112236
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
.+.++++++++ +++...++.|.+||............+...+.+++++|+|+++++...++++.
T Consensus 193 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 193 APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp SEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 78899999998 44445678999999976544332223335689999999998777555554443
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=2.8e-11 Score=100.17 Aligned_cols=185 Identities=10% Similarity=0.019 Sum_probs=121.3
Q ss_pred CeecCCCCEEE-EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLI-SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
|+++++|++++ +.+.++.|.+||..+ .........+...+.++++.+ ++.+
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~---------------------------~~~~~~~~~~~~~p~~i~~~~-~g~l 80 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGS---------------------------TGTTVLPFNGLYQPQGLAVDG-AGTV 80 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC--------------------------------EECCCCSCCSCCCEEECT-TCCE
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCC---------------------------cccceEeeCCcCCcceeEECC-CCCE
Confidence 46889999777 546789999998762 111111122335677888865 5565
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++.. ++.|.+||.......... .....+..++++++|+.+++...++.|.+|+....... .......
T Consensus 81 ~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~----------~~~~~~~ 149 (270)
T 1rwi_B 81 YVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT----------VLPFTGL 149 (270)
T ss_dssp EEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE----------ECCCCSC
T ss_pred EEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE----------eeccccC
Confidence 55555 889999998866543221 22356889999999997777777899999975532111 0111223
Q ss_pred CceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCccccc
Q 045370 159 GSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 159 ~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~ 224 (350)
..+.++++++++ +++...++.|.+||............+...+.+++++++|.++++...+..+..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEE
Confidence 457889999988 445556789999999877655433334467889999999977775544444443
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=5e-12 Score=110.60 Aligned_cols=193 Identities=9% Similarity=-0.059 Sum_probs=112.7
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFV 81 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 81 (350)
.|||||++|+.++.++.|.+||+.++..............++..+.+... ..... .. ...+.|.| ++..++
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~~-~~-----~~~~~~sp-dg~~~~ 157 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDC--TKLVG-IE-----ILKRDWQP-LTSWEK 157 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS--SEEEE-EE-----EEGGGCCC-CCSHHH
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccC--Ccccc-cc-----ccccccCC-CCccee
Confidence 58999999999999999999998742211100000000000000000000 00000 00 00012333 444443
Q ss_pred EE-----eCCCcEEEEeCCCCceEEEEecCCceeEEEEcC-CCcEEEEEccC------CeEEEEeCCccccccccccccc
Q 045370 82 SS-----SLDATCKVWDLGSGILIQTQVYPQAVTAIAFHP-GEQLLFAGSID------GRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 82 s~-----~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~ 149 (350)
.+ ..+..|.+||+.+++......+...+..+.|+| ++..|+.++.+ ..|.+||+.....
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--------- 228 (396)
T 3c5m_A 158 FAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--------- 228 (396)
T ss_dssp HHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---------
T ss_pred eeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---------
Confidence 32 356789999999988777777778899999999 78877665543 3688888763221
Q ss_pred cceeeecc--CCceEEEEecCCe--EEEEeCC-----CcEEEEECCCceEEEEeccCCCceeEEEEEc-cCCeEEeee
Q 045370 150 QHSVLKGH--NGSITALAFSASH--LISASED-----KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR-QSSLLSEVS 217 (350)
Q Consensus 150 ~~~~~~~~--~~~i~~~~~~~~~--l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~~~~ 217 (350)
..+..+ ...+..+.|+|++ |+.++.+ +.|++||+.+++...... ..+ .. +.|+| +|++++.++
T Consensus 229 --~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 229 --RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp --EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEE
T ss_pred --eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEec
Confidence 112222 2357889999998 6666543 449999999886543322 112 23 89999 999888654
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.37 E-value=4e-12 Score=111.22 Aligned_cols=179 Identities=12% Similarity=0.023 Sum_probs=114.1
Q ss_pred CeecCCCCEEEEEeCC---CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSDD---GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
++|||||++|+..... ..|.+||+.+ .........+......+.|+ +++
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~---------------------------~~~~~l~~~~~~~~~~~~~s-pdg 92 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLET---------------------------QQAVQLTEGKGDNTFGGFIS-TDE 92 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT---------------------------TEEEECCCSSCBCTTTCEEC-TTS
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCC---------------------------CcEEEeecCCCCccccceEC-CCC
Confidence 4699999998877543 3678888772 22222222222223335564 477
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecC-CceeE-------------------EEEcCCCcEEEEE-----ccCCeEEE
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYP-QAVTA-------------------IAFHPGEQLLFAG-----SIDGRIFV 132 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~i 132 (350)
..|+.++.++.|.+||+.+++........ ..... +.|+|+++.++.+ ..+..|++
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 88988888999999999988766655422 21112 2456666665544 34568899
Q ss_pred EeCCccccccccccccccceeeeccCCceEEEEecC-Ce--EEEEeCC------CcEEEEECCCceEEEEeccC--CCce
Q 045370 133 SPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSA-SH--LISASED------KTVCLWDVTRRVSIRRFNHK--KGVV 201 (350)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--l~s~~~d------g~v~iwd~~~~~~~~~~~~~--~~~v 201 (350)
||+..+... .+..+...+..+.|+| ++ |+..+.+ ..|.+||+.++... .+..+ ...+
T Consensus 173 ~d~~~g~~~-----------~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~ 240 (396)
T 3c5m_A 173 VDIETGELE-----------VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESC 240 (396)
T ss_dssp EETTTCCEE-----------EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEE
T ss_pred EECCCCcEE-----------eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccc
Confidence 998754321 2334667789999999 66 5555433 46899998766533 33223 2357
Q ss_pred eEEEEEccCCeEEeeecC
Q 045370 202 TNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 202 ~~l~~~~~~~~l~~~~~~ 219 (350)
..++|+|+|+.|+.++.+
T Consensus 241 ~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEECTTSSCEEEEEEE
T ss_pred cceEECCCCCEEEEEecC
Confidence 889999999987766543
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.37 E-value=2e-10 Score=98.17 Aligned_cols=188 Identities=15% Similarity=0.122 Sum_probs=119.7
Q ss_pred CeecCCCCEEEEEeCC----CcEEEEeCccccccccccccccccccccEEEeeccccccceeee--ccccCCceEEEEee
Q 045370 1 MVFSDDGFLLISGSDD----GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS--LEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~ 74 (350)
|+|+|+|+++++...+ +.|.+||..+ ......+ ..+...+.++++.+
T Consensus 92 i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~---------------------------~~~~~~~~~~~~~~~~~~i~~d~ 144 (333)
T 2dg1_A 92 IKIHKDGRLFVCYLGDFKSTGGIFAATENG---------------------------DNLQDIIEDLSTAYCIDDMVFDS 144 (333)
T ss_dssp EEECTTSCEEEEECTTSSSCCEEEEECTTS---------------------------CSCEEEECSSSSCCCEEEEEECT
T ss_pred EEECCCCcEEEEeCCCCCCCceEEEEeCCC---------------------------CEEEEEEccCccCCcccceEECC
Confidence 4688999988877766 6899999872 2111111 12345688888866
Q ss_pred CCCcEEEEEeC------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEE-EEccCCeEEEEeCCc-ccccccccc
Q 045370 75 GGTTFFVSSSL------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLF-AGSIDGRIFVSPLKF-LLLEDHFIV 146 (350)
Q Consensus 75 ~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~ 146 (350)
++.++++... .+.|..+|..+++..........+..++|+|+++.++ +.+.++.|.+||+.. +......
T Consensus 145 -~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~-- 221 (333)
T 2dg1_A 145 -KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF-- 221 (333)
T ss_dssp -TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE--
T ss_pred -CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc--
Confidence 5666666543 3556666666655544444445678999999998665 445678999999863 1111000
Q ss_pred ccccceeeeccCCceEEEEecCCe-E-EEEeCCCcEEEEECCCceEEEEeccCCC------ceeEEEEEccCCeEEeeec
Q 045370 147 GEDQHSVLKGHNGSITALAFSASH-L-ISASEDKTVCLWDVTRRVSIRRFNHKKG------VVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 147 ~~~~~~~~~~~~~~i~~~~~~~~~-l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~v~~l~~~~~~~~l~~~~~ 218 (350)
.......+.++ ..+..+++++++ + ++...++.|.+||. +++.+..+..+.. .+.+++|+|++..|+.++.
T Consensus 222 ~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 222 GATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred cceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 00000111222 467889999998 4 44456789999998 4666666654432 6899999999877765555
Q ss_pred Cc
Q 045370 219 CQ 220 (350)
Q Consensus 219 ~~ 220 (350)
.+
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.37 E-value=3.5e-11 Score=113.68 Aligned_cols=187 Identities=12% Similarity=0.027 Sum_probs=119.3
Q ss_pred CeecCCCCEEEEEeCCC-----cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDG-----MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 75 (350)
++|||||++||.++.++ .|++||+.+ +........+ ..+.+++|+|
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t---------------------------g~~~~~~~~~-~~~~~~~wsp- 180 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDG---------------------------AKELPDVLER-VKFSCMAWTH- 180 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTT---------------------------TEEEEEEEEE-ECSCCEEECT-
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCC---------------------------CCCCcccccC-cccceEEEEe-
Confidence 37999999998776543 899999983 3322222222 2366788866
Q ss_pred CCcEEEEEeCCCc----------------EEEEeCCCCceE--EEEe---cCCceeEEEEcCCCcEEEEEcc-----CCe
Q 045370 76 GTTFFVSSSLDAT----------------CKVWDLGSGILI--QTQV---YPQAVTAIAFHPGEQLLFAGSI-----DGR 129 (350)
Q Consensus 76 ~~~~l~s~~~d~~----------------v~vwd~~~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~~~~-----dg~ 129 (350)
+++.|+.++.++. |.+|++.++... ..+. +...+..+.|+|+|++|+.++. +..
T Consensus 181 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~ 260 (710)
T 2xdw_A 181 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNR 260 (710)
T ss_dssp TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCE
T ss_pred CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccE
Confidence 6677777777766 999999987632 2222 3445789999999999887765 568
Q ss_pred EEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeC----CCcEEEEECCCceE--EEEeccCCC--
Q 045370 130 IFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE----DKTVCLWDVTRRVS--IRRFNHKKG-- 199 (350)
Q Consensus 130 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~----dg~v~iwd~~~~~~--~~~~~~~~~-- 199 (350)
|++||+...... .........+..+...+.. .|+|++ |+..+. ++.|.+||+.++.. ...+..|..
T Consensus 261 l~~~d~~~~~~~---~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 261 LWYCDLQQESNG---ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp EEEEEGGGSSSS---SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred EEEEECcccccc---cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 999998741000 0000022344555555544 477766 444443 23699999987641 233433433
Q ss_pred ceeEEEEEccCCeEEeeecCc
Q 045370 200 VVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 200 ~v~~l~~~~~~~~l~~~~~~~ 220 (350)
.+..++|++++.++++...++
T Consensus 337 ~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEEEEEETTTEEEEEEEETT
T ss_pred eEEEEEEEcCCEEEEEEEECC
Confidence 688899997777777666554
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.35 E-value=3.9e-11 Score=103.11 Aligned_cols=170 Identities=12% Similarity=0.033 Sum_probs=107.3
Q ss_pred CeecCCCCEEEEEeCC---Cc--EEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDD---GM--ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d---g~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 75 (350)
++|||||++|+.++.+ +. |.+||+.+ +.... +..+.. +..+.|+|
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---------------------------g~~~~-l~~~~~-~~~~~wsp- 113 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLET---------------------------LSSKK-ILEAKN-IRSLEWNE- 113 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTT---------------------------TEEEE-EEEESE-EEEEEECT-
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCC---------------------------CceEE-EEcCCC-ccceeECC-
Confidence 3799999999987754 33 66777762 22222 222233 88888866
Q ss_pred CCcEEEEEeC---------------------------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCC
Q 045370 76 GTTFFVSSSL---------------------------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDG 128 (350)
Q Consensus 76 ~~~~l~s~~~---------------------------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 128 (350)
+++.|+.++. ...|.+||+.+++.+..+... .+..+.|+|+| .++++..++
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~ 191 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHRE 191 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCC
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEeccc
Confidence 6666666653 257999999988873443334 88999999999 777775542
Q ss_pred -------eEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCC--------CcEEEEECCCceEE
Q 045370 129 -------RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASED--------KTVCLWDVTRRVSI 191 (350)
Q Consensus 129 -------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~d--------g~v~iwd~~~~~~~ 191 (350)
...+|.+..+.. ..+..+ ..+..+ +|++ |+.++.+ ..|++|| +++..
T Consensus 192 ~~~~~~~~~~l~~~d~~~~-----------~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~ 255 (347)
T 2gop_A 192 IIPQYFKFWDIYIWEDGKE-----------EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM 255 (347)
T ss_dssp SSCCSSCCEEEEEEETTEE-----------EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE
T ss_pred ccccccccccEEEeCCCce-----------EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceE
Confidence 334444332211 122233 444444 8888 6666543 4688888 66655
Q ss_pred EEeccCCCceeE-EEEEccCCeEEeeecCc
Q 045370 192 RRFNHKKGVVTN-LVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 192 ~~~~~~~~~v~~-l~~~~~~~~l~~~~~~~ 220 (350)
.....+...+.. +.|+ ++ ++++++.++
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 445556778886 8999 88 777666554
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.34 E-value=2e-10 Score=104.71 Aligned_cols=185 Identities=10% Similarity=0.021 Sum_probs=129.5
Q ss_pred CCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEe
Q 045370 5 DDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSS 84 (350)
Q Consensus 5 ~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 84 (350)
|.+.++++...++.|.++|.. +...+..+. ....+..+.+++ +++++++++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~---------------------------t~~v~~~i~-~g~~p~~v~~Sp-DGr~lyv~~ 215 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGS---------------------------TYEIKTVLD-TGYAVHISRLSA-SGRYLFVIG 215 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETT---------------------------TCCEEEEEE-CSSCEEEEEECT-TSCEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECC---------------------------CCeEEEEEe-CCCCccceEECC-CCCEEEEEc
Confidence 445577788889999999998 344444443 233556787755 778888899
Q ss_pred CCCcEEEEeCC--CCceEEEEecCCceeEEEEc----CCCcEEEEEcc-CCeEEEEeCCccccccccccccccceeeecc
Q 045370 85 LDATCKVWDLG--SGILIQTQVYPQAVTAIAFH----PGEQLLFAGSI-DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 85 ~d~~v~vwd~~--~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
.|+.|.+||+. +++.+..+........++|+ |+|+++++++. ++.|.++|..+.+.................|
T Consensus 216 ~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred CCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence 99999999996 78888888777778899999 69998888765 5999999988655443221111000001112
Q ss_pred CC-ceEEEEecCCe---EEEEeCCCcEEEEECCCceE--EEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 158 NG-SITALAFSASH---LISASEDKTVCLWDVTRRVS--IRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 158 ~~-~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
.. .+..+..++++ +++...+|.|.++|..+... +..+. .......+.|+|+++++++++..
T Consensus 296 p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~ 362 (567)
T 1qks_A 296 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANA 362 (567)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGG
T ss_pred CCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCC
Confidence 22 67788888876 56666789999999987543 23333 33456788999999998877654
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=1.1e-10 Score=99.53 Aligned_cols=176 Identities=10% Similarity=0.041 Sum_probs=118.6
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecccc-----CCceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK-----SSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~ 75 (350)
|+|+++|+++++...++.|.+||..+ ......+.... .....+++ .
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t---------------------------~~~~~~i~~g~~~~~~~~p~~i~~-~- 139 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKT---------------------------YEITGYIECPDMDMESGSTEQMVQ-Y- 139 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTT---------------------------TEEEEEEECTTCCTTTCBCCCEEE-E-
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCC---------------------------CeEEEEEEcCCccccCCCcceEEE-E-
Confidence 46788885555554899999999883 22222222111 24556666 3
Q ss_pred CCcEEEEEe-CCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC----------CeEEEEeCCcccccccc
Q 045370 76 GTTFFVSSS-LDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID----------GRIFVSPLKFLLLEDHF 144 (350)
Q Consensus 76 ~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~ 144 (350)
++.++++.. .++.|.++|+.+++....+........+.++|+|++++++..+ +.|.++|..++....
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~-- 217 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK-- 217 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE--
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE--
Confidence 455555544 4899999999999988888766677899999999977776654 789999988654322
Q ss_pred ccccccceeeecc-CCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEE--eccCCCceeEEEEEccCCeEEeee
Q 045370 145 IVGEDQHSVLKGH-NGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRR--FNHKKGVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 145 ~~~~~~~~~~~~~-~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~~~~ 217 (350)
.+... ......++++|++ ++++.. .|.+||..+++.... +.........++++|++..|.++.
T Consensus 218 --------~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 218 --------QFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp --------EEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred --------EEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 22211 2367899999977 555544 899999998876422 121235688999999554444444
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.32 E-value=1.3e-10 Score=99.81 Aligned_cols=134 Identities=7% Similarity=0.001 Sum_probs=88.8
Q ss_pred CceEEEEeeCCCcEEEEEeCCC-------cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC--------CeE
Q 045370 66 SVTGLLTISGGTTFFVSSSLDA-------TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID--------GRI 130 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~-------~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i 130 (350)
.+..+.|++ ++ +++++..++ ...+|.+.+++......+ ..+..+ +|+|++|+.++.+ ..|
T Consensus 172 ~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 172 RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEE
T ss_pred CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceE
Confidence 788888876 56 777776542 345555445555444444 444443 9999988777643 468
Q ss_pred EEEeCCccccccccccccccceeeeccCCceEE-EEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEc
Q 045370 131 FVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITA-LAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR 208 (350)
Q Consensus 131 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 208 (350)
++|| .+.. ......+...+.. +.|+ ++ +++++.++.++|| +.+++....+. +.+.|.+++|+|
T Consensus 247 ~~~d--~~~~----------~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~~~~-~~~~v~~~~~s~ 311 (347)
T 2gop_A 247 YIYD--GKEV----------MGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKPIAK-GRHWIMGFDVDE 311 (347)
T ss_dssp EEEC--SSCE----------EESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEEEEC-SSSEEEEEEESS
T ss_pred EEEC--CCce----------EeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEEEec-CCCeEEeeeeeC
Confidence 8887 2211 1123345667876 8999 88 8888899999999 87666544443 577899999999
Q ss_pred cCCeEEeeecCcc
Q 045370 209 QSSLLSEVSNCQR 221 (350)
Q Consensus 209 ~~~~l~~~~~~~~ 221 (350)
.++++++.+..
T Consensus 312 --~~~~~~~~~~~ 322 (347)
T 2gop_A 312 --IVVYLKETATR 322 (347)
T ss_dssp --SEEEEEECSSS
T ss_pred --cEEEEEcCCCC
Confidence 66666666543
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=2.3e-10 Score=108.08 Aligned_cols=183 Identities=11% Similarity=0.007 Sum_probs=121.6
Q ss_pred CeecCCCCEEEEEeCCCc----------------EEEEeCccccccccccccccccccccEEEeeccccccceeeecccc
Q 045370 1 MVFSDDGFLLISGSDDGM----------------ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHK 64 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 64 (350)
++|||||+.|+.++.++. |++|++.+... ....+.....|.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~-----------------------~~~~v~~~~~~~ 232 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS-----------------------EDILCAEFPDEP 232 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG-----------------------GCEEEECCTTCT
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc-----------------------cceEEeccCCCC
Confidence 479999999999988776 88898873110 001122223345
Q ss_pred CCceEEEEeeCCCcEEEEEeC-----CCcEEEEeCCC------C--ceEEEEecCCceeEEEEcCCCcEEEEEccC----
Q 045370 65 SSVTGLLTISGGTTFFVSSSL-----DATCKVWDLGS------G--ILIQTQVYPQAVTAIAFHPGEQLLFAGSID---- 127 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~-----d~~v~vwd~~~------~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 127 (350)
..+..+.|++ ++.+|+.++. +..|.+||+.+ + .......+...+.. .|+|+|..|+..+..
T Consensus 233 ~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 233 KWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp TCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTT
T ss_pred eEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCC
Confidence 5677888865 6666766654 56899999986 4 23333444444544 588888877766543
Q ss_pred CeEEEEeCCccccccccccccccceeeeccCC--ceEEEEecCCe--EEEEeCCC--cEEEEECCCceEEEEeccCCCce
Q 045370 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG--SITALAFSASH--LISASEDK--TVCLWDVTRRVSIRRFNHKKGVV 201 (350)
Q Consensus 128 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~--l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v 201 (350)
+.|.+||+..+... ....+..|.. .+..+.|++++ +++...|+ .|++||+.+++.+..+..+.+.+
T Consensus 311 ~~l~~~d~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v 382 (710)
T 2xdw_A 311 YRLINIDFTDPEES--------KWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV 382 (710)
T ss_dssp CEEEEEETTSCCGG--------GCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE
T ss_pred CEEEEEeCCCCCcc--------cceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE
Confidence 46999998754211 1123334433 68889998655 77777787 46677887788778887777888
Q ss_pred eEEEEEccCCeEEee
Q 045370 202 TNLVVIRQSSLLSEV 216 (350)
Q Consensus 202 ~~l~~~~~~~~l~~~ 216 (350)
..++++|++..++..
T Consensus 383 ~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 383 VGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EEEECCTTCSEEEEE
T ss_pred EEEecCCCCCEEEEE
Confidence 999999998755533
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=8.3e-10 Score=92.76 Aligned_cols=149 Identities=7% Similarity=0.000 Sum_probs=99.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCC---------CcEEEEeCCC-CceEEEEecCCceeEEEEcCCCcEEE-EEccCCeEEEE
Q 045370 65 SSVTGLLTISGGTTFFVSSSLD---------ATCKVWDLGS-GILIQTQVYPQAVTAIAFHPGEQLLF-AGSIDGRIFVS 133 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d---------~~v~vwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~ 133 (350)
..+.++++.+ ++.++++...+ ..-.+|.+.. ++.............++|+|+++.++ +.+.++.|..|
T Consensus 98 ~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~ 176 (297)
T 3g4e_A 98 NRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF 176 (297)
T ss_dssp EEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence 3467788765 56665544322 2345555543 44444444445678999999998665 45567899999
Q ss_pred eCC--ccccccccccccccceeeeccCCceEEEEecCCe-EEEE-eCCCcEEEEECCCceEEEEeccCCCceeEEEEE-c
Q 045370 134 PLK--FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISA-SEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI-R 208 (350)
Q Consensus 134 d~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~-~ 208 (350)
++. .+.... ......+..+...+..+++++++ |.++ ..++.|..||..+++.+..+..+...+++++|. |
T Consensus 177 ~~d~~~G~~~~-----~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~ 251 (297)
T 3g4e_A 177 DYDLQTGQISN-----RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGK 251 (297)
T ss_dssp EECTTTCCEEE-----EEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESG
T ss_pred eccCCCCcccC-----cEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCC
Confidence 873 332211 11112233344678899999998 4444 456789999999999999888776789999999 8
Q ss_pred cCCeEEeeecC
Q 045370 209 QSSLLSEVSNC 219 (350)
Q Consensus 209 ~~~~l~~~~~~ 219 (350)
+++.|+.++..
T Consensus 252 d~~~L~vt~~~ 262 (297)
T 3g4e_A 252 NYSEMYVTCAR 262 (297)
T ss_dssp GGCEEEEEEBC
T ss_pred CCCEEEEEcCC
Confidence 98877766654
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.27 E-value=7.7e-10 Score=94.37 Aligned_cols=170 Identities=11% Similarity=0.040 Sum_probs=119.3
Q ss_pred CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeCC
Q 045370 7 GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLD 86 (350)
Q Consensus 7 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 86 (350)
++++++...++.|.+||.. +...+..+. .......+++++ ++.++++...+
T Consensus 54 ~~lyv~~~~~~~v~viD~~---------------------------t~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~ 104 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDIN---------------------------TFKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWD 104 (328)
T ss_dssp TEEEEEEGGGTEEEEEETT---------------------------TCCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSC
T ss_pred CEEEEEEcCCCEEEEEECc---------------------------ccEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCC
Confidence 4455566667999999988 344444442 346678888866 45655555589
Q ss_pred CcEEEEeCCCCceEEEEecCC------ceeEEEEcCCCcEEEEEc--cCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 87 ATCKVWDLGSGILIQTQVYPQ------AVTAIAFHPGEQLLFAGS--IDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 87 ~~v~vwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+.|.+||..+++....+.... ....+++ ++..+++++ .++.|.++|..++.... .+.. .
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~----------~i~~-g 171 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD----------ELTI-G 171 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE----------EEEC-S
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE----------EEEc-C
Confidence 999999999999887776555 6677888 344555544 48899999998655432 2221 2
Q ss_pred CceEEEEecCCe-EEEEe-CC----------CcEEEEECCCceEEEEeccC-CCceeEEEEEccCCeEEeeec
Q 045370 159 GSITALAFSASH-LISAS-ED----------KTVCLWDVTRRVSIRRFNHK-KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~-~d----------g~v~iwd~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.....+.++|++ ++.++ .+ +.|.++|..+++....+... ......++|+|+++.|+++..
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 234678899988 44443 33 78999999999988777632 236899999999998887665
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.27 E-value=1.6e-10 Score=108.97 Aligned_cols=177 Identities=11% Similarity=0.067 Sum_probs=113.3
Q ss_pred CeecCCCCEEE-----EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCC--ceEEEEe
Q 045370 1 MVFSDDGFLLI-----SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSS--VTGLLTI 73 (350)
Q Consensus 1 i~~s~dg~~l~-----sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~ 73 (350)
++|||||++|| +|+.+..|++||+.+ +.... ..+... ...++|+
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t---------------------------g~~~~--~~~~~~~~~~~~~ws 176 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDS---------------------------GEWSK--VDVIEGGKYATPKWT 176 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTT---------------------------CCBCS--SCCBSCCTTCCCEEC
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCC---------------------------CCCcC--CcccCcccccceEEe
Confidence 37999999998 444567899999983 22210 011111 2567886
Q ss_pred eCCCcEEEEEeCCCc-------------EEEEeCCCCce--EEEEe---cCCceeEEEEcCCCcEEEEEccCC----eEE
Q 045370 74 SGGTTFFVSSSLDAT-------------CKVWDLGSGIL--IQTQV---YPQAVTAIAFHPGEQLLFAGSIDG----RIF 131 (350)
Q Consensus 74 ~~~~~~l~s~~~d~~-------------v~vwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg----~i~ 131 (350)
+ +++.|+.++.|.. |++|++.++.. ...+. +...+..+.|+|+|++|+.++.++ .|+
T Consensus 177 p-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 177 P-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp T-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred c-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 5 6777888888776 99999998763 22222 345788999999999988877665 667
Q ss_pred EEeCCccccccccccccccceeeeccCCceEEEEecCCeE-EEEe---CCCcEEEEECCCceE---EEEeccC-CCceeE
Q 045370 132 VSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHL-ISAS---EDKTVCLWDVTRRVS---IRRFNHK-KGVVTN 203 (350)
Q Consensus 132 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l-~s~~---~dg~v~iwd~~~~~~---~~~~~~~-~~~v~~ 203 (350)
+|+...+ ....+..+...+....++++.+ +.+. .++.|.+||+.++.. ...+..+ ...+..
T Consensus 256 ~~~~~~~-----------~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 256 WKRPGEK-----------DFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp EECTTCS-----------SCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred EEcCCCC-----------ceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 7654322 1224445555666666644443 3333 258899999987642 2223323 446788
Q ss_pred EEEEccCCeEEeeecC
Q 045370 204 LVVIRQSSLLSEVSNC 219 (350)
Q Consensus 204 l~~~~~~~~l~~~~~~ 219 (350)
++|+ ++.++++...+
T Consensus 325 ~~~~-~~~lv~~~~~d 339 (695)
T 2bkl_A 325 VSIV-GGHLSLEYLKD 339 (695)
T ss_dssp EEEE-TTEEEEEEEET
T ss_pred EEEE-CCEEEEEEEEC
Confidence 8888 56666655544
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=1.7e-09 Score=91.33 Aligned_cols=152 Identities=11% Similarity=0.116 Sum_probs=102.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCC---------------CcEEEEeCCCCceEEEEecCCceeEEEEc----CCCcEEEEE-
Q 045370 65 SSVTGLLTISGGTTFFVSSSLD---------------ATCKVWDLGSGILIQTQVYPQAVTAIAFH----PGEQLLFAG- 124 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d---------------~~v~vwd~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~- 124 (350)
..+.++++.+ ++.++++...+ +.|..||.. ++.............++|+ |+++.++++
T Consensus 117 ~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEE
Confidence 4578888866 56666666554 567777766 6555444444567889999 999766555
Q ss_pred ccCCeEEEEeCC-ccccccccccccccceeeeccC-CceEEEEecCCe-E-EEEeCCCcEEEEECCCceEEEEeccCCCc
Q 045370 125 SIDGRIFVSPLK-FLLLEDHFIVGEDQHSVLKGHN-GSITALAFSASH-L-ISASEDKTVCLWDVTRRVSIRRFNHKKGV 200 (350)
Q Consensus 125 ~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~-l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 200 (350)
..++.|.+||.. .+.... ......+..+. ..+..+++++++ + ++...++.|.+||..+++.+..+..+...
T Consensus 195 ~~~~~i~~~~~~~~g~~~~-----~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 269 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIEN-----KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEK 269 (314)
T ss_dssp TTTTEEEEEEEEETTEEEE-----EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSC
T ss_pred CCCCeEEEEECCCCCcccc-----ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCC
Confidence 567899999976 222110 01111233343 567889999998 4 44456889999999877777767666678
Q ss_pred eeEEEEEccCCeEEeeecC-cccc
Q 045370 201 VTNLVVIRQSSLLSEVSNC-QRKL 223 (350)
Q Consensus 201 v~~l~~~~~~~~l~~~~~~-~~~~ 223 (350)
+.+++|+|+++.|..++.. +.++
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEE
T ss_pred ceeEEECCCCCEEEEEeCCCCeEE
Confidence 9999999999955545443 3443
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=7.3e-10 Score=91.97 Aligned_cols=172 Identities=12% Similarity=0.054 Sum_probs=120.6
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccc-cCCceEEEEeeCCCcEE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEH-KSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l 80 (350)
+++|+|++|+ +.++.|..||.. +..+..+..+ ...+.++.+.+ ++.++
T Consensus 43 ~~~pdG~ilv--s~~~~V~~~d~~----------------------------G~~~W~~~~~~~~~~~~~~~~~-dG~~l 91 (276)
T 3no2_A 43 AATKAGEILF--SYSKGAKMITRD----------------------------GRELWNIAAPAGCEMQTARILP-DGNAL 91 (276)
T ss_dssp EECTTSCEEE--ECBSEEEEECTT----------------------------SCEEEEEECCTTCEEEEEEECT-TSCEE
T ss_pred EECCCCCEEE--eCCCCEEEECCC----------------------------CCEEEEEcCCCCccccccEECC-CCCEE
Confidence 5678888777 346678888764 3333333333 24566777655 77888
Q ss_pred EEEeC-CCcEEEEeCCCCceEEEEecC-------CceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccce
Q 045370 81 VSSSL-DATCKVWDLGSGILIQTQVYP-------QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHS 152 (350)
Q Consensus 81 ~s~~~-d~~v~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 152 (350)
++.+. ++.|..+|. +|+.+..+... .....+++.++|+++++...++.|..||.. ++...
T Consensus 92 v~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w---------- 159 (276)
T 3no2_A 92 VAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN---------- 159 (276)
T ss_dssp EEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE----------
T ss_pred EEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE----------
Confidence 88776 777888886 67777665421 235567789999999999999999999987 55432
Q ss_pred eeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCC------CceeEEEEEccCCeEEeee
Q 045370 153 VLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKK------GVVTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 153 ~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~------~~v~~l~~~~~~~~l~~~~ 217 (350)
.+... ..+.++...+++ +++++.++.|..+|..+++.+.++..+. ..+.+++..++|.++++.+
T Consensus 160 ~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 160 SVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 22222 344566777877 6667777789999999999999986322 2378888999999988664
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=7.8e-11 Score=101.59 Aligned_cols=130 Identities=15% Similarity=0.074 Sum_probs=94.8
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+| |+++|+++ .++.|++||+.+ .........|...+.++.+.+++ +
T Consensus 93 l~f--d~~~L~v~-~~~~l~v~dv~s---------------------------l~~~~~~~~~~~~v~~i~~~~p~---~ 139 (388)
T 1xip_A 93 VCF--HGDQVLVS-TRNALYSLDLEE---------------------------LSEFRTVTSFEKPVFQLKNVNNT---L 139 (388)
T ss_dssp EEE--ETTEEEEE-ESSEEEEEESSS---------------------------TTCEEEEEECSSCEEEEEECSSE---E
T ss_pred EEE--CCCEEEEE-cCCcEEEEEchh---------------------------hhccCccceeecceeeEEecCCC---E
Confidence 467 88999999 889999999983 22223345566778888776543 8
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee---cc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK---GH 157 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~ 157 (350)
++++.||.|.+||+.++.... +...|+|++|+|+| ++.|..||.+++|+...........+... ..+. +|
T Consensus 140 av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~P--p~~~~~~~~ 212 (388)
T 1xip_A 140 VILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLP--SELEELPVE 212 (388)
T ss_dssp EEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCC--HHHHTSCTT
T ss_pred EEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCC--cccccccCC
Confidence 889999999999999887653 44689999999999 67888999999998775442100000000 0112 47
Q ss_pred CCceEEEEecCCe
Q 045370 158 NGSITALAFSASH 170 (350)
Q Consensus 158 ~~~i~~~~~~~~~ 170 (350)
...|.++.|.+++
T Consensus 213 ~~~V~sI~wl~~~ 225 (388)
T 1xip_A 213 EYSPLSVTILSPQ 225 (388)
T ss_dssp TSEEEEEEESSSS
T ss_pred CeeEEEEEEecCC
Confidence 7899999999988
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=1.5e-09 Score=91.66 Aligned_cols=182 Identities=15% Similarity=0.109 Sum_probs=117.5
Q ss_pred CeecCCCCEEEE-------EeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee----ccccCCceE
Q 045370 1 MVFSDDGFLLIS-------GSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS----LEHKSSVTG 69 (350)
Q Consensus 1 i~~s~dg~~l~s-------g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~ 69 (350)
++|+++|+++++ +..++.|.+||..+ ....... .++...+.+
T Consensus 23 ~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~---------------------------g~~~~~~~~~~~~~~~~~~~ 75 (314)
T 1pjx_A 23 PVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT---------------------------GKKTVICKPEVNGYGGIPAG 75 (314)
T ss_dssp EEECTTSCEEEEETTCEETTEECCEEEEECTTT---------------------------CCEEEEECCEETTEECCEEE
T ss_pred ceECCCCCEEEEEeccccCCCCCCEEEEEeCCC---------------------------CcEEEEEecccCCCCCCCce
Confidence 478899988887 57789999999762 1111111 124567888
Q ss_pred EEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE-Eec-----CCceeEEEEcCCCcEEEEEccC---------------C
Q 045370 70 LLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVY-----PQAVTAIAFHPGEQLLFAGSID---------------G 128 (350)
Q Consensus 70 ~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~~~~~d---------------g 128 (350)
+++.+.++.++++. ..+.|.+||.. ++.... ... ...+.+++++++|+++++...+ +
T Consensus 76 i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 76 CQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp EEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 88866325555444 44579999998 765443 221 1347899999999887777655 5
Q ss_pred eEEEEeCCccccccccccccccceeeeccCCceEEEEec----CCe--EEEE-eCCCcEEEEECC-Cce-----EEEEec
Q 045370 129 RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS----ASH--LISA-SEDKTVCLWDVT-RRV-----SIRRFN 195 (350)
Q Consensus 129 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~--l~s~-~~dg~v~iwd~~-~~~-----~~~~~~ 195 (350)
.|..||.. +... .+..+......++++ |++ ++.+ ..++.|.+||+. +++ ....+.
T Consensus 154 ~l~~~~~~-g~~~-----------~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 221 (314)
T 1pjx_A 154 SIYCFTTD-GQMI-----------QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP 221 (314)
T ss_dssp EEEEECTT-SCEE-----------EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEECCC-CCEE-----------EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC
Confidence 67777654 2111 122233456889999 987 4444 567899999986 444 233334
Q ss_pred cCC-CceeEEEEEccCCeEEeeecCcccc
Q 045370 196 HKK-GVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 196 ~~~-~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
.+. ..+..++++++|.++++...+..+.
T Consensus 222 ~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 222 GTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp CCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 343 5678899999999888665554443
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=4.1e-09 Score=88.22 Aligned_cols=182 Identities=11% Similarity=0.009 Sum_probs=122.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+++++|+++++...++.|.+||... .........+...+.++++.+ ++.++
T Consensus 20 i~~d~~g~l~v~~~~~~~v~~~d~~~---------------------------~~~~~~~~~~~~~~~~i~~~~-~g~l~ 71 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKANMISCINLDG---------------------------KITEYPLPTPDAKVMCLTISS-DGEVW 71 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTC---------------------------CEEEEECSSTTCCEEEEEECT-TSCEE
T ss_pred eEECCCCCEEEEecCCCcEEEEcCCC---------------------------CeEEecCCcccCceeeEEECC-CCCEE
Confidence 46789998887776688999998761 100111122346788888765 66777
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
++...++.|..||.. +.. ..+. ....+..+++++++..+++...++.|..||. .+.... .....+
T Consensus 72 v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~---------~~~~~~ 139 (299)
T 2z2n_A 72 FTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE---------YELPNK 139 (299)
T ss_dssp EEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE---------EECSST
T ss_pred EeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE---------ecCCCC
Confidence 776668889999986 443 2222 3456899999999988888777889999997 332211 011223
Q ss_pred CCceEEEEecCCe-EEEE-eCCCcEEEEECCCceEEEE-eccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 158 NGSITALAFSASH-LISA-SEDKTVCLWDVTRRVSIRR-FNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 158 ~~~i~~~~~~~~~-l~s~-~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
...+..+++.+++ +..+ ..++.|..||. +++.... +......+.+++++++|.+.++......+.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 4578999999998 5444 45689999999 6665432 333445688999999999777554444443
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=3.4e-09 Score=93.14 Aligned_cols=192 Identities=4% Similarity=-0.088 Sum_probs=115.9
Q ss_pred CeecCCCCEEEEEeCCC--cEEEEeCccccccccccccccccccccEEEeeccccccceeee----ccccCCceEEEEee
Q 045370 1 MVFSDDGFLLISGSDDG--MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS----LEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~~ 74 (350)
++|+|++++|+++..++ .|.+|+... ......+ ......+.++++.+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~---------------------------~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKAS---------------------------GWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGG---------------------------TTCEEEEEECCTTSCSCCCBCEECT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCC---------------------------CceeEEeeeccchhcCCcEEEEEeC
Confidence 46788888777777655 566666552 1111111 11446677888876
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCceEEE----Ee-cCCce-e-EEEEcCC-CcEEEEEccCCeEEEEeCCcccccccccc
Q 045370 75 GGTTFFVSSSLDATCKVWDLGSGILIQT----QV-YPQAV-T-AIAFHPG-EQLLFAGSIDGRIFVSPLKFLLLEDHFIV 146 (350)
Q Consensus 75 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~----~~-~~~~v-~-~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 146 (350)
.++.+++ +..++.|..||..++..... .. ....- . .++|+|+ +.++++-..++.|+.|+..... .. ...
T Consensus 229 ~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~-~~g 305 (409)
T 3hrp_A 229 TEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EW-FCG 305 (409)
T ss_dssp TSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EE-EEE
T ss_pred CCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EE-EEe
Confidence 5565544 66788999999987764332 11 11111 3 9999995 5566666677899999876321 00 000
Q ss_pred cc-c----cceeeeccCCceEEEEecCCe--EEEEe-CCCcEEEEECCCceEEEEeccC---------------CCceeE
Q 045370 147 GE-D----QHSVLKGHNGSITALAFSASH--LISAS-EDKTVCLWDVTRRVSIRRFNHK---------------KGVVTN 203 (350)
Q Consensus 147 ~~-~----~~~~~~~~~~~i~~~~~~~~~--l~s~~-~dg~v~iwd~~~~~~~~~~~~~---------------~~~v~~ 203 (350)
.. . .-......-.....++++|++ +++-+ .++.|+.||+.++... .+.++ ......
T Consensus 306 ~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~g 384 (409)
T 3hrp_A 306 SATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYD 384 (409)
T ss_dssp CTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEE
T ss_pred CCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceE
Confidence 00 0 000000112457899999999 55555 6889999998877743 33332 235789
Q ss_pred EEEEccCCeEEeeecCcccc
Q 045370 204 LVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 204 l~~~~~~~~l~~~~~~~~~~ 223 (350)
++++|++.++++-....++.
T Consensus 385 iavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 385 ICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp EEECSSSEEEEEESTTCEEE
T ss_pred EEEcCCCCEEEEECCCCeEE
Confidence 99999987777555554443
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.22 E-value=8.6e-10 Score=103.90 Aligned_cols=183 Identities=10% Similarity=-0.029 Sum_probs=120.2
Q ss_pred CeecCCCCEEEEEeCCCc-------------EEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCc
Q 045370 1 MVFSDDGFLLISGSDDGM-------------ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSV 67 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 67 (350)
++|+|||+.|+.++.|.. |++|++.+... ...++.....|...+
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-----------------------~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-----------------------KDTVVHERTGDPTTF 229 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-----------------------GCEEEECCCCCTTCE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-----------------------hceEEEecCCCCEEE
Confidence 579999999999998876 99999873110 011222334455678
Q ss_pred eEEEEeeCCCcEEEEEeCCC----cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEc---cCCeEEEEeCCcccc
Q 045370 68 TGLLTISGGTTFFVSSSLDA----TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGS---IDGRIFVSPLKFLLL 140 (350)
Q Consensus 68 ~~~~~~~~~~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~ 140 (350)
.++.|++ ++++++.++.++ .|.+|+..++.......+...+....+ ++|.+++... .++.|.+||+.++..
T Consensus 230 ~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~ 307 (695)
T 2bkl_A 230 LQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPAR 307 (695)
T ss_dssp EEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSG
T ss_pred EEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCc
Confidence 8888866 666666666555 677777766666555566666666666 5666444443 258999999875432
Q ss_pred ccccccccccceeeec-c-CCceEEEEecCCe-EEEEeCCCcEEEEECC-CceEEEEeccC-CCceeEEEEEccCCeEEe
Q 045370 141 EDHFIVGEDQHSVLKG-H-NGSITALAFSASH-LISASEDKTVCLWDVT-RRVSIRRFNHK-KGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~-~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~ 215 (350)
.. ...+.. + ...+..++++.+. +++...|+..+||.+. ++..+..+..+ .+.+..++++|+++.++.
T Consensus 308 ~~--------~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 379 (695)
T 2bkl_A 308 AS--------WKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYY 379 (695)
T ss_dssp GG--------CEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEE
T ss_pred cC--------CeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEE
Confidence 10 112222 2 4567888888555 8888889988887654 35566666544 667888899999876663
Q ss_pred e
Q 045370 216 V 216 (350)
Q Consensus 216 ~ 216 (350)
.
T Consensus 380 ~ 380 (695)
T 2bkl_A 380 V 380 (695)
T ss_dssp E
T ss_pred E
Confidence 3
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.21 E-value=6.4e-09 Score=87.01 Aligned_cols=185 Identities=7% Similarity=-0.072 Sum_probs=123.0
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+++++|.++++...++.|..||... .............+.++++.+ ++.++
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~g---------------------------~~~~~~~~~~~~~~~~i~~~~-~g~l~ 113 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKKG---------------------------IIKEYTLPNPDSAPYGITEGP-NGDIW 113 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTS---------------------------CEEEEECSSTTCCEEEEEECT-TSCEE
T ss_pred EEECCCCCEEEeCCCCCeEEEECCCC---------------------------cEEEEeCCCcCCCceeeEECC-CCCEE
Confidence 45778888777776678888888651 100011112345678888865 66777
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-e-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-V-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++...++.|.+||. ++...... . ....+..++++++++.+++...++.|..||. .+.... .....+.
T Consensus 114 v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~---------~~~~~~~ 182 (299)
T 2z2n_A 114 FTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE---------FKIPTPA 182 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE---------EECSSTT
T ss_pred EEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE---------eeCCCCC
Confidence 77767889999998 56544332 1 3456899999999988887777889999998 433221 0122334
Q ss_pred CceEEEEecCCe-EEEEe-CCCcEEEEECCCceEEEE-eccCCCceeEEEEEccCCeEEeeecCcccccc
Q 045370 159 GSITALAFSASH-LISAS-EDKTVCLWDVTRRVSIRR-FNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~-~dg~v~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~ 225 (350)
..+.++++++++ +..+. .++.|.+||. +++.... ...+...+.+++++++|.+.++...+..+..+
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 251 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRL 251 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEE
Confidence 568899999988 55444 5789999999 6664332 23345678999999999977755444444433
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.18 E-value=9.8e-09 Score=87.42 Aligned_cols=146 Identities=14% Similarity=0.075 Sum_probs=94.5
Q ss_pred CCceEEEEeeCCCcEEEEEeC------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCC-
Q 045370 65 SSVTGLLTISGGTTFFVSSSL------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLK- 136 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~- 136 (350)
..+.++++.+ ++.++++... .+.|..++ +++.............++|+|+++.++.+ +.++.|.+||+.
T Consensus 134 ~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 3577888866 5665554432 23455555 55544433444457799999999876554 557899999985
Q ss_pred -cc-ccccccccccccceeeeccCCceEEEEecCCe-EEEEe-CCCcEEEEECCCceEEEEeccCCCceeEEEEE-ccCC
Q 045370 137 -FL-LLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISAS-EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI-RQSS 211 (350)
Q Consensus 137 -~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~~ 211 (350)
++ .... ......+......+..+++.+++ +..+. .++.|..||. +++.+..+..+...+++++|+ |++.
T Consensus 211 ~~Gl~~~~-----~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 211 RTGLPTGK-----AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp TTCCBSSC-----CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred ccCCcccC-----ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 33 2111 01111222334567889999998 55444 5678999998 577777777666679999999 8888
Q ss_pred eEEeeecC
Q 045370 212 LLSEVSNC 219 (350)
Q Consensus 212 ~l~~~~~~ 219 (350)
.|+.++..
T Consensus 285 ~L~vt~~~ 292 (326)
T 2ghs_A 285 RLLVTSAR 292 (326)
T ss_dssp EEEEEEBC
T ss_pred EEEEEecC
Confidence 77655544
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=1.3e-08 Score=92.88 Aligned_cols=179 Identities=11% Similarity=-0.006 Sum_probs=118.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEee---CCC
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTIS---GGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~ 77 (350)
+.|||||+++++++.|+.|.+||+... ....+..+... .....+++++ +++
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~-------------------------t~~~v~~i~~G-~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMK-------------------------EPTTVAEIKIG-SEARSIETSKMEGWED 255 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSS-------------------------SCCEEEEEECC-SEEEEEEECCSTTCTT
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCC-------------------------CCcEeEEEecC-CCCceeEEccccCCCC
Confidence 479999999999999999999998400 12333333332 2356888874 466
Q ss_pred cEEEE-EeCCCcEEEEeCCCCceEEEEecC-----------C-ceeEEEEcCCCcE-EEEEccCCeEEEEeCCccccccc
Q 045370 78 TFFVS-SSLDATCKVWDLGSGILIQTQVYP-----------Q-AVTAIAFHPGEQL-LFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 78 ~~l~s-~~~d~~v~vwd~~~~~~~~~~~~~-----------~-~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
+++++ ...+++|.++|..+.+.+..+... . .+..+..++++.. ++....+|.|.++|........
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~- 334 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK- 334 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-
Confidence 65555 455699999999999988875421 2 5678888887654 4455567999999987432110
Q ss_pred cccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEecc-CCC--ceeEEE-EEccCCeEE
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNH-KKG--VVTNLV-VIRQSSLLS 214 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~--~v~~l~-~~~~~~~l~ 214 (350)
+..+ .......++.|+|++ +++...++.|.++|+.+++.+..+.. ... +-.... ++|++..+.
T Consensus 335 -------v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~ 404 (567)
T 1qks_A 335 -------TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 404 (567)
T ss_dssp -------EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred -------eeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEE
Confidence 1111 233456788999998 44555678999999999998877653 111 112333 578754443
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=2.1e-09 Score=92.26 Aligned_cols=191 Identities=10% Similarity=0.090 Sum_probs=118.6
Q ss_pred CeecCCCCEEEEEeC-----CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec------cccCCceE
Q 045370 1 MVFSDDGFLLISGSD-----DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL------EHKSSVTG 69 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~ 69 (350)
|+|+++|+++++-.. ++.|.+||+.+ ......+. .+...+..
T Consensus 72 v~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t---------------------------g~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN---------------------------NQLSRVIYLPPPITLSNSFVND 124 (343)
T ss_dssp EEECSSSEEEEEECHHHHTSCCEEEEEETTT---------------------------TEEEEEEECCTTTSCTTCCCCE
T ss_pred EEEcCCCcEEEEcCCCCcCCCCeEEEEECCC---------------------------CeEEEEEECChhhcccccccce
Confidence 468888876665543 57899999873 22222111 22345688
Q ss_pred EEEeeCCCcEEEEEe---CCCcEEEEeCCCCceEEEEec------------------------------CCceeEEEEcC
Q 045370 70 LLTISGGTTFFVSSS---LDATCKVWDLGSGILIQTQVY------------------------------PQAVTAIAFHP 116 (350)
Q Consensus 70 ~~~~~~~~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~------------------------------~~~v~~~~~~~ 116 (350)
+++.+.++..+++.. .++.|.+||+.+++....+.. ...+..++|+|
T Consensus 125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~ 204 (343)
T 2qe8_A 125 LAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA 204 (343)
T ss_dssp EEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred EEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence 888765566666665 688999999988776554321 02357899999
Q ss_pred CCcEEEEEccCC-eEEEEeCCccccccccccccccce--eeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEE
Q 045370 117 GEQLLFAGSIDG-RIFVSPLKFLLLEDHFIVGEDQHS--VLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSI 191 (350)
Q Consensus 117 ~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~ 191 (350)
+++.|+.+..++ .++.++..... ........... ...++......+++++++ +++...++.|.+||..+++..
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLS--NLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHT--CTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhc--CCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEE
Confidence 999888887665 55555432110 00000000000 112344456778999998 666667889999999566643
Q ss_pred EEecc-CCCceeEEEEEccCCeEEeeecCc
Q 045370 192 RRFNH-KKGVVTNLVVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 192 ~~~~~-~~~~v~~l~~~~~~~~l~~~~~~~ 220 (350)
..... +...+.+++|.+++.++++.+...
T Consensus 283 ~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 283 LLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred EEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 33321 244688999999998877665543
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=3.3e-09 Score=100.69 Aligned_cols=179 Identities=13% Similarity=0.059 Sum_probs=109.9
Q ss_pred CeecCCCCEEEEEeCC-----CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC
Q 045370 1 MVFSDDGFLLISGSDD-----GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 75 (350)
++|||||++||.++.+ ..|++||+.+ +..... ..+...+..++|++
T Consensus 168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t---------------------------g~~~~~-~~~~~~~~~~~wsp- 218 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVAD---------------------------GKPLAD-ELKWVKFSGLAWLG- 218 (741)
T ss_dssp EEECTTSSEEEEEEEETTCSEEEEEEEETTT---------------------------CCEEEE-EEEEEESCCCEEST-
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCC---------------------------CCCCCc-cCCCceeccEEEEC-
Confidence 3799999999887654 4699999983 222211 11122235677866
Q ss_pred CCcEEEEEeCCCc--------------EEEEeCCCCce--EEEEec---CCceeEEEEcCCCcEEEEEccCC-----eEE
Q 045370 76 GTTFFVSSSLDAT--------------CKVWDLGSGIL--IQTQVY---PQAVTAIAFHPGEQLLFAGSIDG-----RIF 131 (350)
Q Consensus 76 ~~~~l~s~~~d~~--------------v~vwd~~~~~~--~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg-----~i~ 131 (350)
+ +.|+.++.++. |.+|++.++.. ...+.. ...+..+.|+|+|++|+..+.++ .|+
T Consensus 219 D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~ 297 (741)
T 1yr2_A 219 N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVH 297 (741)
T ss_dssp T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEE
T ss_pred C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEE
Confidence 5 56666666554 89999987763 222222 23588999999999888777544 899
Q ss_pred EEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeC----CCcEEEEECCCc--eEEEEeccCCCceeE
Q 045370 132 VSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE----DKTVCLWDVTRR--VSIRRFNHKKGVVTN 203 (350)
Q Consensus 132 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~----dg~v~iwd~~~~--~~~~~~~~~~~~v~~ 203 (350)
+||+..+.. .....+..+...+.... +|++ |+..+. ++.|.+||+.++ .....+..+...+..
T Consensus 298 ~~d~~~~~~--------~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 298 VARVTNGKI--------GPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp EEEEETTEE--------CCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred EEECCCCCC--------cccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 999875310 10223444444444443 3655 555554 356999999874 334444445556667
Q ss_pred EEEEccCCeEEeeecC
Q 045370 204 LVVIRQSSLLSEVSNC 219 (350)
Q Consensus 204 l~~~~~~~~l~~~~~~ 219 (350)
++|+ ++.++++...+
T Consensus 369 ~~~~-~~~lv~~~~~d 383 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHD 383 (741)
T ss_dssp EEEE-BTEEEEEEEET
T ss_pred EEEE-CCEEEEEEEEC
Confidence 7777 45555555444
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=3.6e-09 Score=92.93 Aligned_cols=179 Identities=12% Similarity=0.027 Sum_probs=114.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+|+++|+++++...++.|++||..+ ......... ..... ++|.+ ++..+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~---------------------------g~~~~~~~~-~~~~~-ia~~~-~g~~l 185 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDD---------------------------NKVTTVHPG-FKGGK-PAVTK-DKQRV 185 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTT---------------------------TEEEEEEET-CCBCB-CEECT-TSSEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCC---------------------------CEEEEeecc-CCCCc-eeEec-CCCcE
Confidence 57899999888887789999999872 222222222 22233 77755 56677
Q ss_pred EEEeCCC--cEEEEeCCCCceEEEE----e-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccccccee
Q 045370 81 VSSSLDA--TCKVWDLGSGILIQTQ----V-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 81 ~s~~~d~--~v~vwd~~~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
+++..++ .|.+|+...+.....+ . ....+.+++++|++..|+++..++.|+.||............ .
T Consensus 186 ~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~------~ 259 (409)
T 3hrp_A 186 YSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL------E 259 (409)
T ss_dssp EEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC------C
T ss_pred EEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc------c
Confidence 7777665 7889998776654444 2 345678999999655566677789999999875432110000 0
Q ss_pred eeccCCce--EEEEecCC-e--EEEEeCCCcEEEEECCCceEEEEeccC---------------CCceeEEEEEccCCeE
Q 045370 154 LKGHNGSI--TALAFSAS-H--LISASEDKTVCLWDVTRRVSIRRFNHK---------------KGVVTNLVVIRQSSLL 213 (350)
Q Consensus 154 ~~~~~~~i--~~~~~~~~-~--l~s~~~dg~v~iwd~~~~~~~~~~~~~---------------~~~v~~l~~~~~~~~l 213 (350)
..++...- ..++|+|+ + +++-..++.|+.||.... +..+.++ ......++++|+|.++
T Consensus 260 ~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 260 LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 11111111 38999995 5 555567789999998654 2233222 2347899999999966
Q ss_pred Eeee
Q 045370 214 SEVS 217 (350)
Q Consensus 214 ~~~~ 217 (350)
++-+
T Consensus 338 vad~ 341 (409)
T 3hrp_A 338 IVDG 341 (409)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6544
No 207
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=1.1e-08 Score=83.28 Aligned_cols=182 Identities=7% Similarity=0.027 Sum_probs=120.1
Q ss_pred CeecCCCCEEEEEeC--CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeecc-ccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSD--DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE-HKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 77 (350)
|+|+|||.++++.+. ++.|.++|+.+ +.....+.- .......+++. ++
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~t---------------------------g~v~~~i~l~~~~fgeGi~~~--g~ 76 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQT---------------------------GKVENIHKMDDSYFGEGLTLL--NE 76 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTT---------------------------CCEEEEEECCTTCCEEEEEEE--TT
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCC---------------------------CCEEEEEecCCCcceEEEEEe--CC
Confidence 468898755555543 68999999983 444433321 11122345553 34
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecC-CceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYP-QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.+.++.-.++.+.++|..+.+.+..+... .. ...+++++..++++..++.|.++|..+.+......... -..
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~-----~~~ 149 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY-----NGH 149 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE-----TTE
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC-----CCc
Confidence 56666667899999999999999888755 33 34455688877777788999999998755433221110 000
Q ss_pred cCCceEEEEecCCe-EEEEe-CCCcEEEEECCCceEEEEeccC-------------CCceeEEEEEccCCeEEeeecC
Q 045370 157 HNGSITALAFSASH-LISAS-EDKTVCLWDVTRRVSIRRFNHK-------------KGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 157 ~~~~i~~~~~~~~~-l~s~~-~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
.-..++.+.|. ++ +++.. .++.|.+.|..+++.+..+... ......++|+|+++.+++++..
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 11246778888 55 44444 5789999999999999888631 1256899999998866666644
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.11 E-value=3.4e-08 Score=85.58 Aligned_cols=194 Identities=11% Similarity=-0.058 Sum_probs=118.0
Q ss_pred CeecCCCCEEEEEeC--CCcEEEEeCccccccccccccccccccccEEEeeccccccceee-eccccCCceEEEEeeCCC
Q 045370 1 MVFSDDGFLLISGSD--DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHY-SLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 1 i~~s~dg~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~ 77 (350)
++|||||++|+.+.. ++.|.++| .+ ...... +. ... ++.+.+.+.
T Consensus 130 ~~~spDG~~l~v~n~~~~~~v~viD-~t---------------------------~~~~~~~i~-~~~---~~~~~~~~~ 177 (373)
T 2mad_H 130 NANTPNNADLLFFQFAAGPAVGLVV-QG---------------------------GSSDDQLLS-SPT---CYHIHPGAP 177 (373)
T ss_pred eEECCCCCEEEEEecCCCCeEEEEE-CC---------------------------CCEEeEEcC-CCc---eEEEEeCCC
Confidence 479999999998874 57899999 83 333333 21 111 234445555
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEe------cCCc-eeEEEEcCCCcEEEEEccCCeEEEEeCCccccc--ccccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQV------YPQA-VTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLE--DHFIVGE 148 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~------~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~ 148 (350)
..+++.+.||.+.++|. +++...... ...+ .....+.+++..++..+..+.+.+.|+...... ..+....
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 66778888999999999 887663321 1112 123455666655554456789999998643211 0000000
Q ss_pred ccceeeeccCCceEEEEecCCe--EEEEeC----------CCcEEEEECCCceEEEEeccCCCceeEEEEEccCC-eEEe
Q 045370 149 DQHSVLKGHNGSITALAFSASH--LISASE----------DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS-LLSE 215 (350)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~~--l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~ 215 (350)
...............+.++|++ ++++.. ++.|.++|+.+++.+.++.. .....+++|+|||+ ++++
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v 335 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYA 335 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEE
Confidence 0000001112334557889987 554432 35799999999999999963 34689999999999 7776
Q ss_pred eecCccccccccC
Q 045370 216 VSNCQRKLKKDRM 228 (350)
Q Consensus 216 ~~~~~~~~~~~~~ 228 (350)
+......+.+.+.
T Consensus 336 ~~~~~~~V~ViD~ 348 (373)
T 2mad_H 336 LSAGTEVLHIYDA 348 (373)
T ss_pred EcCCCCeEEEEEC
Confidence 6543444444433
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.10 E-value=4.5e-08 Score=81.80 Aligned_cols=184 Identities=9% Similarity=-0.038 Sum_probs=119.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+++++|+++++...++.|..||... .............+.++++.+ ++.++
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~g---------------------------~~~~~~~~~~~~~~~~i~~~~-~g~l~ 118 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKKG---------------------------GFTEYPLPQPDSGPYGITEGL-NGDIW 118 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTS---------------------------CEEEEECSSTTCCEEEEEECS-TTCEE
T ss_pred EEECCCCCEEEEecCCCeEEEECCCC---------------------------CeEEecCCCCCCCCccceECC-CCCEE
Confidence 35677787777666677788887651 111111122335678888765 66777
Q ss_pred EEEeCCCcEEEEeCCCCceEEE-Ee-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 81 VSSSLDATCKVWDLGSGILIQT-QV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++...++.|..+|.. ++.... .. ....+..++++++++.+++...++.|..||.. +.... .....+.
T Consensus 119 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~---------~~~~~~~ 187 (300)
T 2qc5_A 119 FTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GKLEE---------YPLPTNA 187 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEE---------EECSSTT
T ss_pred EEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-CcEEE---------eeCCCCC
Confidence 776668899999988 655433 22 34568899999999977766667899999873 32211 0122334
Q ss_pred CceEEEEecCCe-EEEEe-CCCcEEEEECCCceEEEE-eccCCCceeEEEEEccCCeEEeeecCccccc
Q 045370 159 GSITALAFSASH-LISAS-EDKTVCLWDVTRRVSIRR-FNHKKGVVTNLVVIRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~-~dg~v~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~ 224 (350)
..+.++++++++ +..+. ..+.|.+||. +++.... +..+...+.+++++++|.+.++......+..
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGR 255 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEE
Confidence 578899999988 55554 4668999998 4544332 3334566889999999997775544444443
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.09 E-value=5.1e-08 Score=81.48 Aligned_cols=184 Identities=9% Similarity=-0.025 Sum_probs=121.9
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
|+++++|+++++...++.|.+||... .........+...+.++++.+ ++.++
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~~---------------------------~~~~~~~~~~~~~~~~i~~~~-~g~l~ 76 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQSG---------------------------RIKEFEVPTPDAKVMCLIVSS-LGDIW 76 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTS---------------------------CEEEEECSSTTCCEEEEEECT-TSCEE
T ss_pred eeECCCCCEEEEcCCCCeEEEECCCC---------------------------ceEEEECCCCCCcceeEEECC-CCCEE
Confidence 46788998888777788999998651 000011122335678888754 66766
Q ss_pred EEEeCCCcEEEEeCCCCceEEEE-e-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQ-V-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++...++.|..||.. ++..... . ....+.+++++++++++++...++.|..||.. +.... ..+....
T Consensus 77 v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~---------~~~~~~~ 145 (300)
T 2qc5_A 77 FTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE---------YDLPNKG 145 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE---------EECSSTT
T ss_pred EEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE---------ccCCCCC
Confidence 666667889999988 6553221 1 23568999999999888887778899999876 32211 0122234
Q ss_pred CceEEEEecCCe-EEEEe-CCCcEEEEECCCceEEEE-eccCCCceeEEEEEccCCeEEeeecCccccc
Q 045370 159 GSITALAFSASH-LISAS-EDKTVCLWDVTRRVSIRR-FNHKKGVVTNLVVIRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~-~dg~v~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~ 224 (350)
..+.++++.+++ +..+. .++.|..||. +++.... ...+...+.+++++++|.+.++......+..
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 578899999988 55444 4788999998 5554432 2234456889999999987775544444433
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=6.3e-09 Score=87.70 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=94.9
Q ss_pred CceEEEEeeCCCcEEEE----EeC-------------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC-
Q 045370 66 SVTGLLTISGGTTFFVS----SSL-------------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID- 127 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s----~~~-------------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 127 (350)
.+.++++.+ ++.++++ |.. .+.|..||..+++..... .......++|+|+++.|+++...
T Consensus 132 ~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 132 SPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCC
Confidence 456777755 6676665 332 256777887777655444 44567889999999988877665
Q ss_pred -----CeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCce
Q 045370 128 -----GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVV 201 (350)
Q Consensus 128 -----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v 201 (350)
+.|.+|++........ .. ...........+++++++ |.+++.+| |.+||. .++.+..+..+. .+
T Consensus 210 ~~~~~~~i~~~~~~~~~l~~~-----~~--~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~-~g~~~~~~~~~~-~~ 279 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGALHDR-----RH--FASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDS-DGQLLGHIPTPG-TA 279 (305)
T ss_dssp ---CCCEEEEEEEETTEEEEE-----EE--EECCSSSCCCSEEECTTSCEEECCSSE-EEEECT-TSCEEEEEECSS-CC
T ss_pred cCCCCCEEEEEEecCCCccCC-----eE--EEECCCCCCCeEEECCCCCEEEecCCc-EEEECC-CCCEEEEEECCC-ce
Confidence 7899999874321110 00 011123445678899999 77777554 999998 477777776444 58
Q ss_pred eEEEEEccCCeEEeeecC
Q 045370 202 TNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 202 ~~l~~~~~~~~l~~~~~~ 219 (350)
.+++|+|+++.|..++.+
T Consensus 280 ~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 280 SNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CEEEECTTSCEEEEEETT
T ss_pred eEEEEeCCCCEEEEEcCC
Confidence 999999998877766554
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=5.9e-08 Score=82.55 Aligned_cols=177 Identities=11% Similarity=0.003 Sum_probs=111.9
Q ss_pred eecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 2 VFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
.|+|++ .++++...++.|..||..+ ... ..+ .....+.++++.+ ++.++
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~---------------------------~~~-~~~-~~~~~v~~i~~~~-dg~l~ 104 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLAS---------------------------GRK-TVH-ALPFMGSALAKIS-DSKQL 104 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTT---------------------------TEE-EEE-ECSSCEEEEEEEE-TTEEE
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCC---------------------------CcE-EEE-ECCCcceEEEEeC-CCeEE
Confidence 688875 4566666788999999872 211 111 2245788898876 55655
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEec-----CCceeEEEEcCCCcEEEEEcc------CCeEEEEeCCccccccccccccc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVY-----PQAVTAIAFHPGEQLLFAGSI------DGRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~ 149 (350)
++ +.+ .|.+||..+++....... ...+..++++|+|+++++... .+.|+.++ .+...
T Consensus 105 v~-~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-------- 172 (326)
T 2ghs_A 105 IA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-------- 172 (326)
T ss_dssp EE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE--------
T ss_pred EE-ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE--------
Confidence 54 344 499999988876544332 135889999999987665432 24566665 22211
Q ss_pred cceeeeccCCceEEEEecCCe--E-EEEeCCCcEEEEECC--Cc-e-----EEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 150 QHSVLKGHNGSITALAFSASH--L-ISASEDKTVCLWDVT--RR-V-----SIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 150 ~~~~~~~~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~--~~-~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.+..+......++|+|++ + ++.+.++.|.+||+. ++ . .+..+......+..++++++|.+.++...
T Consensus 173 ---~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 173 ---KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp ---EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred ---EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 111223456789999998 4 444567899999986 55 2 23333334456788999999988776544
Q ss_pred Ccccc
Q 045370 219 CQRKL 223 (350)
Q Consensus 219 ~~~~~ 223 (350)
.+.+.
T Consensus 250 ~~~v~ 254 (326)
T 2ghs_A 250 EGAVD 254 (326)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 44443
No 213
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.06 E-value=3.2e-08 Score=79.62 Aligned_cols=180 Identities=10% Similarity=0.074 Sum_probs=119.7
Q ss_pred CeecCCCCEEEEEeCCC--cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCc--eEEEEeeCC
Q 045370 1 MVFSDDGFLLISGSDDG--MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSV--TGLLTISGG 76 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~ 76 (350)
|.|+ ++.++.+.+.+| .|+++|+++ +.......-. ... -.++.. +
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~T---------------------------gkv~~~~~l~-~~~FgeGit~~--g 96 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIES---------------------------GKTLQQIELG-KRYFGEGISDW--K 96 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTT---------------------------CCEEEEEECC-TTCCEEEEEEE--T
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCC---------------------------CcEEEEEecC-CccceeEEEEe--C
Confidence 3577 677777777766 899999983 4444433222 222 234442 4
Q ss_pred CcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 77 TTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
+.+.+....++.+.++|..+.+.+..+.....-..++ +++..|+....++.|.++|..+.+........ ..+
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~------~~g 168 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVT------AHG 168 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECE------ETT
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEec------cCC
Confidence 4555556678999999999999999988765444444 57787877777889999999876544322211 011
Q ss_pred c-CCceEEEEecCCeEEEEe-CCCcEEEEECCCceEEEEeccC------------CCceeEEEEEccCCeEEeeecC
Q 045370 157 H-NGSITALAFSASHLISAS-EDKTVCLWDVTRRVSIRRFNHK------------KGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 157 ~-~~~i~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~------------~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
. -..++.+.|....+.+.. .++.|.+.|..+++.+..+... ......++|+|+++.|++++..
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 134566777733344444 6789999999999999887531 1356899999998877766643
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=3.4e-08 Score=82.83 Aligned_cols=179 Identities=9% Similarity=0.123 Sum_probs=113.4
Q ss_pred eecCCC-CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 2 VFSDDG-FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
.|+|++ .++++...++.|..||..+ ... .. ......+.++++.+ ++.++
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~---------------------------~~~-~~-~~~~~~~~~i~~~~-dG~l~ 68 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFT---------------------------KQV-QR-VTMDAPVSSVALRQ-SGGYV 68 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTT---------------------------CCE-EE-EECSSCEEEEEEBT-TSSEE
T ss_pred eEECCCCEEEEEECCCCEEEEEECCC---------------------------CcE-EE-EeCCCceEEEEECC-CCCEE
Confidence 588854 5666666789999999872 221 11 22346788898866 55644
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEec-----CCceeEEEEcCCCcEEEEEcc-----------CCeEEEEeCCcccccccc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVY-----PQAVTAIAFHPGEQLLFAGSI-----------DGRIFVSPLKFLLLEDHF 144 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~ 144 (350)
+ +. ++.|.+||..+++....... ...+..++++|+|+++++... .+.|+.++.. +.
T Consensus 69 v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~----- 140 (297)
T 3g4e_A 69 A-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH----- 140 (297)
T ss_dssp E-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-----
T ss_pred E-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC-----
Confidence 4 44 56799999998876544332 134788999999996665432 2344444432 11
Q ss_pred ccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEEC--CCceE-----EEEeccCCCceeEEEEEccCCeEE
Q 045370 145 IVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDV--TRRVS-----IRRFNHKKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~--~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~ 214 (350)
...+..+....+.++|+|++ +++.+.++.|.+||+ .++.. +..+..+.+....++++++|.+.+
T Consensus 141 ------~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 141 ------VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp ------EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred ------EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence 11222333456889999998 455666789999987 45543 233333345678999999998777
Q ss_pred eeecCccccc
Q 045370 215 EVSNCQRKLK 224 (350)
Q Consensus 215 ~~~~~~~~~~ 224 (350)
+....+++..
T Consensus 215 a~~~~~~v~~ 224 (297)
T 3g4e_A 215 ACYNGGRVIR 224 (297)
T ss_dssp EEETTTEEEE
T ss_pred EEcCCCEEEE
Confidence 6655544443
No 215
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=5.8e-08 Score=78.15 Aligned_cols=178 Identities=12% Similarity=0.076 Sum_probs=119.7
Q ss_pred eecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCce--EEEEeeCCCcE
Q 045370 2 VFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVT--GLLTISGGTTF 79 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~ 79 (350)
.|+ ++.++++.+.+|.|+++|+++ ++..... -..... .++. .++.+
T Consensus 61 ~~~-~~~Ly~stG~~g~v~~iD~~T---------------------------gkv~~~~--l~~~~FgeGit~--~g~~L 108 (268)
T 3nok_A 61 VFH-QGHFFESTGHQGTLRQLSLES---------------------------AQPVWME--RLGNIFAEGLAS--DGERL 108 (268)
T ss_dssp EEE-TTEEEEEETTTTEEEECCSSC---------------------------SSCSEEE--ECTTCCEEEEEE--CSSCE
T ss_pred EEE-CCEEEEEcCCCCEEEEEECCC---------------------------CcEEeEE--CCCCcceeEEEE--eCCEE
Confidence 455 356777888889999999983 4444443 112222 3444 24566
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCC
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNG 159 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (350)
++....++.+.+||..+.+.+..+.....-..++ +++..|+.+..++.|.++|..+.+......... -...-.
T Consensus 109 y~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-----~g~~v~ 181 (268)
T 3nok_A 109 YQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-----RGQPVE 181 (268)
T ss_dssp EEEESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-----TTEECC
T ss_pred EEEEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-----CCcccc
Confidence 6666778999999999999999988765555555 467888888889999999998765443322210 001113
Q ss_pred ceEEEEecCCeEEEEe-CCCcEEEEECCCceEEEEeccC-------------CCceeEEEEEccCCeEEeeec
Q 045370 160 SITALAFSASHLISAS-EDKTVCLWDVTRRVSIRRFNHK-------------KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 160 ~i~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.++.+.|....+.+.. .+..|.+.|..+++.+..+... ......++|+|+++.|++++.
T Consensus 182 ~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 182 LINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 4567777733444444 6789999999999998887521 136789999998766655543
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.01 E-value=3.8e-08 Score=93.42 Aligned_cols=180 Identities=11% Similarity=-0.011 Sum_probs=114.2
Q ss_pred CeecCCCCEEEEEeCCCc--------------EEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCC
Q 045370 1 MVFSDDGFLLISGSDDGM--------------ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSS 66 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~--------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 66 (350)
++|||| +.|+.++.|+. |++|++.+... ....+.....+...
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----------------------~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-----------------------ADQPVFATPELPKR 269 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-----------------------GCEEEECCTTCTTC
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-----------------------hCEEEeccCCCCeE
Confidence 579999 99988887664 77777752110 01112222233345
Q ss_pred ceEEEEeeCCCcEEEEEeCCC-----cEEEEeCCCC--c-eEEEEecCCceeEEEEcCCCcEEEEEcc----CCeEEEEe
Q 045370 67 VTGLLTISGGTTFFVSSSLDA-----TCKVWDLGSG--I-LIQTQVYPQAVTAIAFHPGEQLLFAGSI----DGRIFVSP 134 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~d~-----~v~vwd~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d 134 (350)
+.++.|++ ++++++..+.++ .|.+||+.++ . ......+...+.... +|+|..|+..+. ++.|.+||
T Consensus 270 ~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 270 GHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp EEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEe
Confidence 77888855 777777666543 7999999877 4 444444444444443 488888877765 35699999
Q ss_pred CCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECC-CceEEEEecc-CCCceeEEEEEccCC
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVT-RRVSIRRFNH-KKGVVTNLVVIRQSS 211 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~-~~~~~~~~~~-~~~~v~~l~~~~~~~ 211 (350)
+..+. ......+..+...+..+.++.+. +++...|+..+||.+. ++..+..+.. +.+.+..+.++|+++
T Consensus 348 ~~~~~--------~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 348 LSGST--------PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDR 419 (741)
T ss_dssp CSSSS--------CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCS
T ss_pred CCCCc--------cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCC
Confidence 87531 01111333445567778888555 7788888887777544 4556666653 356788999999987
Q ss_pred eEE
Q 045370 212 LLS 214 (350)
Q Consensus 212 ~l~ 214 (350)
.++
T Consensus 420 ~l~ 422 (741)
T 1yr2_A 420 HAY 422 (741)
T ss_dssp CEE
T ss_pred EEE
Confidence 555
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.00 E-value=1.5e-08 Score=95.36 Aligned_cols=178 Identities=17% Similarity=0.159 Sum_probs=109.4
Q ss_pred CeecCCCCEEEEE-----eCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC
Q 045370 1 MVFSDDGFLLISG-----SDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG 75 (350)
Q Consensus 1 i~~s~dg~~l~sg-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 75 (350)
++|||||++||.+ +.+..|++||+++ +..+... .+......++|+
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t---------------------------g~~~~~~-~~~~k~~~~~Ws-- 183 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVES---------------------------KQPLETP-LKDVKFSGISWL-- 183 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTT---------------------------CSEEEEE-EEEEESCCCEEE--
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCC---------------------------CCCCccc-cCCceeccEEEe--
Confidence 3799999998843 3336799999983 2222111 111113456786
Q ss_pred CCcEEEEEeCCC-------------cEEEEeCCCCce--EEEEe----cCCceeEEEEcCCCcEEEEEcc----CCeEEE
Q 045370 76 GTTFFVSSSLDA-------------TCKVWDLGSGIL--IQTQV----YPQAVTAIAFHPGEQLLFAGSI----DGRIFV 132 (350)
Q Consensus 76 ~~~~l~s~~~d~-------------~v~vwd~~~~~~--~~~~~----~~~~v~~~~~~~~~~~l~~~~~----dg~i~i 132 (350)
+++.|+.++.+. .|.+|++.++.. ...+. +......+.|+|+|++|+.... ++.|++
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 556666666664 399999988653 22222 2334678999999998865432 358999
Q ss_pred EeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEeCC---CcEEEEECCCceE--EEEeccCCCceeEE
Q 045370 133 SPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASED---KTVCLWDVTRRVS--IRRFNHKKGVVTNL 204 (350)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~d---g~v~iwd~~~~~~--~~~~~~~~~~v~~l 204 (350)
+|+..+. .....+..+....... +++++ ++.+..+ +.|..+|+.++.. ...+..|...+.
T Consensus 264 ~d~~~~~---------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-- 331 (693)
T 3iuj_A 264 KDLSQEN---------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-- 331 (693)
T ss_dssp EETTSTT---------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--
T ss_pred EECCCCC---------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--
Confidence 9987532 1223444555555554 44444 4444443 6799999987653 234444555544
Q ss_pred EEEccCCeEEeeecCc
Q 045370 205 VVIRQSSLLSEVSNCQ 220 (350)
Q Consensus 205 ~~~~~~~~l~~~~~~~ 220 (350)
.|+++++.|+....++
T Consensus 332 ~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp EEEEETTEEEEEEEET
T ss_pred EEEEECCEEEEEEEEC
Confidence 8999999887666543
No 218
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=5.3e-07 Score=71.94 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=117.8
Q ss_pred eecCCCCEEEEEeCCC--cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCC-ceEEEEeeCCCc
Q 045370 2 VFSDDGFLLISGSDDG--MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSS-VTGLLTISGGTT 78 (350)
Q Consensus 2 ~~s~dg~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~ 78 (350)
.|++ +.++.+.+.+| .|+++|+.+ +.......-.... --.++.. ++.
T Consensus 27 ~~~~-~~LyestG~~g~S~v~~vD~~t---------------------------gkv~~~~~l~~~~fgeGi~~~--~~~ 76 (243)
T 3mbr_X 27 FYLR-GHLYESTGETGRSSVRKVDLET---------------------------GRILQRAEVPPPYFGAGIVAW--RDR 76 (243)
T ss_dssp EEET-TEEEEEECCTTSCEEEEEETTT---------------------------CCEEEEEECCTTCCEEEEEEE--TTE
T ss_pred EEEC-CEEEEECCCCCCceEEEEECCC---------------------------CCEEEEEeCCCCcceeEEEEe--CCE
Confidence 4665 55666666654 899999983 4444333222111 1233332 456
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
+++....++.+.++|..+.+.+..+.....-..++ +++..|+.+..++.|.++|..+........... -...-
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-----~g~~~ 149 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-----GGRPL 149 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-----TTEEC
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-----CCccc
Confidence 66666778999999999999999988766555555 467777777778999999998765443322210 00011
Q ss_pred CceEEEEecCCeEEEEe-CCCcEEEEECCCceEEEEeccC-------------CCceeEEEEEccCCeEEeeec
Q 045370 159 GSITALAFSASHLISAS-EDKTVCLWDVTRRVSIRRFNHK-------------KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 159 ~~i~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~~~~~~l~~~~~ 218 (350)
..++.+.+....+.+.. .+..|.+.|..+++.+..+... ......++++|+++.|++++.
T Consensus 150 ~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 150 DNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 34566777644444444 6779999999999998887511 135789999998876665654
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.94 E-value=8.4e-08 Score=82.44 Aligned_cols=196 Identities=14% Similarity=0.051 Sum_probs=121.4
Q ss_pred CeecCCCCEEEEEeC--CCcEEEEeCcccccccccccc--------c-----cccccccEEEeeccccccceeeeccc--
Q 045370 1 MVFSDDGFLLISGSD--DGMICVWSMTRLLKQTSELMH--------H-----SDQLDQRLIEMELRSLRSLLHYSLEH-- 63 (350)
Q Consensus 1 i~~s~dg~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~~h-- 63 (350)
++|+|||++|+.+.. ++.|.++|+.+.......... . ....++.+.................+
T Consensus 142 ~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~ 221 (386)
T 3sjl_D 142 TSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 221 (386)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec
Confidence 479999999888864 689999999874432211110 0 11234444444443322221111111
Q ss_pred --cCCce-EEEEeeCCCcEEEEEeCCCcEEEEeCCCCce--EEEEe-----------cCCceeEEEEcCCCcEEEEEcc-
Q 045370 64 --KSSVT-GLLTISGGTTFFVSSSLDATCKVWDLGSGIL--IQTQV-----------YPQAVTAIAFHPGEQLLFAGSI- 126 (350)
Q Consensus 64 --~~~v~-~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~- 126 (350)
..++. ...|.++++.+++ .+.+|.|.+.|+.++.. ...+. .+.....++++++++.+++...
T Consensus 222 ~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~ 300 (386)
T 3sjl_D 222 PEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQ 300 (386)
T ss_dssp CTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred cccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecc
Confidence 12221 1345555665444 55689999999987643 22222 1334556888999998888653
Q ss_pred ---------CCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEe-CCCcEEEEECCCceEEEE
Q 045370 127 ---------DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISAS-EDKTVCLWDVTRRVSIRR 193 (350)
Q Consensus 127 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~-~dg~v~iwd~~~~~~~~~ 193 (350)
.+.|.++|+.+.+... .+... ..+..+++++++ |++++ .++.|.++|..+++.+.+
T Consensus 301 ~~~~~hk~~~~~V~viD~~t~kv~~----------~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 301 RDEWRHKTASRFVVVLDAKTGERLA----------KFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEE----------EEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred ccccccCCCCCEEEEEECCCCeEEE----------EEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 2579999998665443 22211 367889999997 55544 589999999999999999
Q ss_pred eccCCCceeEEEEEcc
Q 045370 194 FNHKKGVVTNLVVIRQ 209 (350)
Q Consensus 194 ~~~~~~~v~~l~~~~~ 209 (350)
+.. .+....|.+++|
T Consensus 370 i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 370 VNQ-LGHGPQVITTAD 384 (386)
T ss_dssp ECC-CCSSCCEEEECC
T ss_pred ecC-CCCCceeEECCc
Confidence 974 344567778776
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=1.1e-07 Score=82.60 Aligned_cols=188 Identities=14% Similarity=0.100 Sum_probs=118.9
Q ss_pred eecCCCCEEEEEeCC------CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccC---CceEEEE
Q 045370 2 VFSDDGFLLISGSDD------GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKS---SVTGLLT 72 (350)
Q Consensus 2 ~~s~dg~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~ 72 (350)
..+||| +++++..+ |.|.++|.+ +...+..+..... .-..+-|
T Consensus 144 ~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~---------------------------T~~v~~~~~~~~~~~~~~Yd~~~ 195 (462)
T 2ece_A 144 HCGPDA-IYISALGNEEGEGPGGILMLDHY---------------------------SFEPLGKWEIDRGDQYLAYDFWW 195 (462)
T ss_dssp EECSSC-EEEEEEEETTSCSCCEEEEECTT---------------------------TCCEEEECCSBCTTCCCCCCEEE
T ss_pred eECCCe-EEEEcCCCcCCCCCCeEEEEECC---------------------------CCeEEEEEccCCCCccccceEEE
Confidence 457899 77776666 789999988 3444444432211 1223544
Q ss_pred eeCCCcEEEEEe-------------------CCCcEEEEeCCCCceEEEEecC---CceeEEEE--cCCCcEEEEEcc--
Q 045370 73 ISGGTTFFVSSS-------------------LDATCKVWDLGSGILIQTQVYP---QAVTAIAF--HPGEQLLFAGSI-- 126 (350)
Q Consensus 73 ~~~~~~~l~s~~-------------------~d~~v~vwd~~~~~~~~~~~~~---~~v~~~~~--~~~~~~l~~~~~-- 126 (350)
+++++.+++.. .+.+|.+||+.+++.+..+... .....+.| +|+++++++++.
T Consensus 196 -~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 196 -NLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp -ETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred -CCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 45667777774 3789999999999888887654 24556666 999999888774
Q ss_pred ----CCeEEEEeCCccccccccccc--cc-cceee-------eccCCceEEEEecCCe--EEE-EeCCCcEEEEECC---
Q 045370 127 ----DGRIFVSPLKFLLLEDHFIVG--ED-QHSVL-------KGHNGSITALAFSASH--LIS-ASEDKTVCLWDVT--- 186 (350)
Q Consensus 127 ----dg~i~i~d~~~~~~~~~~~~~--~~-~~~~~-------~~~~~~i~~~~~~~~~--l~s-~~~dg~v~iwd~~--- 186 (350)
++.|.+|....+.......+. .. ....+ .+-......|.++|++ |.+ .-..+.|.+||+.
T Consensus 275 ~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~ 354 (462)
T 2ece_A 275 LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF 354 (462)
T ss_dssp TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT
T ss_pred ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 568877766543221111110 00 00001 0012457889999999 444 4457899999985
Q ss_pred CceEEEEeccCC--------------CceeEEEEEccCCeEEeeec
Q 045370 187 RRVSIRRFNHKK--------------GVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 187 ~~~~~~~~~~~~--------------~~v~~l~~~~~~~~l~~~~~ 218 (350)
+.+.+..+.... +....++++|+|++|+++..
T Consensus 355 ~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 355 KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 346666664210 13588999999999998774
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.91 E-value=4.1e-08 Score=85.82 Aligned_cols=64 Identities=13% Similarity=0.163 Sum_probs=46.2
Q ss_pred EEecCCe--EEEEeC----------CCcEEEEECCCceEEEEeccCCCceeEEEEEccCC-eEEeeecCccccccccC
Q 045370 164 LAFSASH--LISASE----------DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS-LLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 164 ~~~~~~~--l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~~~~~~~~~~~ 228 (350)
++++|++ +++... ++.|.++|+.+++.+.++.. .....++.|+|+++ +++++......+.+.+.
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 6788887 444432 35799999999999999873 23578999999999 88877754444444433
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.90 E-value=1.3e-07 Score=79.58 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=111.8
Q ss_pred eecCCCC-EEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 2 VFSDDGF-LLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 2 ~~s~dg~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
.|+|+|+ +++++..++.|..|+.. +. ...+..+...+.++++.+ ++.++
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~~----------------------------g~-~~~~~~~~~~~~gl~~d~-dG~l~ 100 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRED----------------------------GT-VDVLLDATAFTNGNAVDA-QQRLV 100 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEETT----------------------------SC-EEEEEESCSCEEEEEECT-TSCEE
T ss_pred eEeCCCCEEEEEECCCCEEEEEeCC----------------------------CC-EEEEeCCCCccceeeECC-CCCEE
Confidence 6899998 66777778999999865 11 223334556788888865 66766
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEec-----CCceeEEEEcCCCcEEEE----Ecc-------------CCeEEEEeCCcc
Q 045370 81 VSSSLDATCKVWDLGSGILIQTQVY-----PQAVTAIAFHPGEQLLFA----GSI-------------DGRIFVSPLKFL 138 (350)
Q Consensus 81 ~s~~~d~~v~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~ 138 (350)
++...++.|.+|+.. ++....... ...+..++++|+|+++++ |.. .+.|+.||..++
T Consensus 101 v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g 179 (305)
T 3dr2_A 101 HCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS 179 (305)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC
T ss_pred EEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC
Confidence 555556789999986 654333221 134678999999998876 332 256777776543
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe--EEEEeCC------CcEEEEECCCceEE--EEe-ccCCCceeEEEEE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASED------KTVCLWDVTRRVSI--RRF-NHKKGVVTNLVVI 207 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~d------g~v~iwd~~~~~~~--~~~-~~~~~~v~~l~~~ 207 (350)
... .+. .....+.++|+|++ |+.+... +.|++||+..+... ..+ ....+....++++
T Consensus 180 ~~~-----------~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 180 PLQ-----------RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp CCE-----------EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC
T ss_pred cEE-----------EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC
Confidence 221 111 33456789999998 6666554 78999998765411 111 1123456789999
Q ss_pred ccCCeEEee
Q 045370 208 RQSSLLSEV 216 (350)
Q Consensus 208 ~~~~~l~~~ 216 (350)
++|++.++.
T Consensus 248 ~~G~lwv~~ 256 (305)
T 3dr2_A 248 RGGWLWSSS 256 (305)
T ss_dssp TTSCEEECC
T ss_pred CCCCEEEec
Confidence 999966644
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=1e-07 Score=81.73 Aligned_cols=201 Identities=11% Similarity=0.091 Sum_probs=114.6
Q ss_pred CeecCCCCEEEEEeC--CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLLISGSD--DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 78 (350)
|+++|+|+++++... ++.++||.+..+ .+..+. ........|-..+.++++.+ ++.
T Consensus 22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g----------------~~~~~p-----~~~~~~~~~~~~p~gv~~d~-~g~ 79 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQPEMQVAELTQD----------------GLIPFP-----PQSGNAIITFDTVLGIKSDG-NGI 79 (343)
T ss_dssp EEECTTSCEEEEECGGGCCSCSEEEEETT----------------EEEESC-----CCCSSCCCCCSCEEEEEECS-SSE
T ss_pred EEECCCCCEEEEeCCCCCCceEEEEECCC----------------CeecCC-----CcccCcccceeEeeEEEEcC-CCc
Confidence 578999999888642 343566655411 000000 00011224667889999866 456
Q ss_pred EEEEEeC-----CCcEEEEeCCCCceEEEEecC-------CceeEEEEcCCCcEE-EEEc---cCCeEEEEeCCcccccc
Q 045370 79 FFVSSSL-----DATCKVWDLGSGILIQTQVYP-------QAVTAIAFHPGEQLL-FAGS---IDGRIFVSPLKFLLLED 142 (350)
Q Consensus 79 ~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l-~~~~---~dg~i~i~d~~~~~~~~ 142 (350)
++++-.. ++.|.+||+.+++.+..+..+ ..+..+++++++..+ ++-. .++.|.+||+.++....
T Consensus 80 L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 80 VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 5555433 578999999999877766532 346899999865554 4444 57899999987654322
Q ss_pred cccc----cccc-ceeeec--------------cCCceEEEEecCCe--EEEEeCCC-cEEEEECC---Cce-----EEE
Q 045370 143 HFIV----GEDQ-HSVLKG--------------HNGSITALAFSASH--LISASEDK-TVCLWDVT---RRV-----SIR 192 (350)
Q Consensus 143 ~~~~----~~~~-~~~~~~--------------~~~~i~~~~~~~~~--l~s~~~dg-~v~iwd~~---~~~-----~~~ 192 (350)
.... .... .....+ ....+..|+++|++ |+.+..++ .|+.++.. .+. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 1100 0000 000000 11346889999998 66666555 55555432 110 000
Q ss_pred --EeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 193 --RFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 193 --~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
...++.+....++++++|.++++......+.
T Consensus 240 ~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~ 272 (343)
T 2qe8_A 240 KIERYSEKPICDGISIDKDHNIYVGDLAHSAIG 272 (343)
T ss_dssp TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEE
T ss_pred ceEecccCCCCceEEECCCCCEEEEccCCCeEE
Confidence 1112334567899999998888665554444
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.84 E-value=3e-07 Score=78.99 Aligned_cols=145 Identities=9% Similarity=-0.019 Sum_probs=101.7
Q ss_pred ecCCCCEEEEEeC-----CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 3 FSDDGFLLISGSD-----DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 3 ~s~dg~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
..|+++.++.... ++.|.+.|.. ....+..+.....+ .++++| ++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~---------------------------t~~v~~~I~vG~~P--~va~sp-DG 89 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGE---------------------------AGRVIGMIDGGFLP--NPVVAD-DG 89 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETT---------------------------TTEEEEEEEECSSC--EEEECT-TS
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECC---------------------------CCeEEEEEECCCCC--cEEECC-CC
Confidence 5689988887765 6899999998 45555555444444 477766 55
Q ss_pred cEEEEEe----------CCCcEEEEeCCCCceEEEEecC--------CceeEEEEcCCCcEEEEEcc--CCeEEEEeCCc
Q 045370 78 TFFVSSS----------LDATCKVWDLGSGILIQTQVYP--------QAVTAIAFHPGEQLLFAGSI--DGRIFVSPLKF 137 (350)
Q Consensus 78 ~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~ 137 (350)
++++.+. .++.|.+||..+++.+..+... .....+.|+|||++++++.. ++.|.++|+.+
T Consensus 90 ~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 90 SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 5555543 4678999999999998887543 25678999999999998864 68999999997
Q ss_pred cccccccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCC-ceEE
Q 045370 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTR-RVSI 191 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~-~~~~ 191 (350)
.+... .+.... |....|.+ +++.+.||.+.+.++.+ ++..
T Consensus 170 ~~vv~----------tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 170 KAFKR----------MLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 213 (386)
T ss_dssp TEEEE----------EEECCS----EEEEEEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred CcEEE----------EEECCC----cceeecCCCceeEEECCCCCEEEEECCCCCeEE
Confidence 65433 222111 11223444 77888899999999976 5543
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=8.1e-10 Score=95.78 Aligned_cols=145 Identities=17% Similarity=0.109 Sum_probs=79.6
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeC
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 85 (350)
++..+++++.||.|..||..+ +.....+.. +.+.+..+.. ++..+++++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t---------------------------G~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT---------------------------GSIKWTLKE--DPVLQVPTHV-EEPAFLPDPN 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT---------------------------CCEEEEEEC--CCSCCCC------CCEEECTT
T ss_pred eCCEEEEEcCCCEEEEEECCC---------------------------CCEEEEecC--CCceecceEc-CCCEEEEeCC
Confidence 577899999999999999883 333333322 3343333333 4556777789
Q ss_pred CCcEEEEeCCCCceEEEEecC--Ccee-EEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceE
Q 045370 86 DATCKVWDLGSGILIQTQVYP--QAVT-AIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSIT 162 (350)
Q Consensus 86 d~~v~vwd~~~~~~~~~~~~~--~~v~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (350)
|+.|..||..+|+.+...... ..+. +..+. .+..+++++.|+.++.||..+++.... +..+.
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~----------~~~~~---- 122 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT----------LSSAF---- 122 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE----------ecCCC----
Confidence 999999999998876654322 1111 00111 355778888899999999997765432 11121
Q ss_pred EEEecCCe--EEEEeCCCcEEEEECCCceEEEEec
Q 045370 163 ALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 163 ~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
...++|++ +++++.|+.|+.||.++++.+..+.
T Consensus 123 ~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 123 ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ----------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 12344544 8889999999999999998776654
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.76 E-value=1.9e-09 Score=93.38 Aligned_cols=118 Identities=19% Similarity=0.030 Sum_probs=67.2
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
..+++|+.|+.|..||..+|+.+..+.... ...++|++..+++++.|+.|+.||.++++....... ...
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~--------~~~ 161 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY--------FDY 161 (369)
T ss_dssp --CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEE--------EEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec--------ccc
Confidence 457788889999999999999887765433 234567888999999999999999987654332111 111
Q ss_pred CCceEEEEecC----Ce-EEEEeCCCcEEEEECCCceEEEEeccCCCceeE-EEEEccCC
Q 045370 158 NGSITALAFSA----SH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTN-LVVIRQSS 211 (350)
Q Consensus 158 ~~~i~~~~~~~----~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~-l~~~~~~~ 211 (350)
....+.+ ++ +++++.||.|+.||..+++.+.++.. ..++.. ..+++++.
T Consensus 162 ----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 162 ----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp ----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSC
T ss_pred ----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCce
Confidence 1222333 14 88889999999999999999988873 344443 44555664
No 227
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.73 E-value=3.3e-06 Score=73.01 Aligned_cols=145 Identities=12% Similarity=-0.060 Sum_probs=97.5
Q ss_pred ecCCCCEEEEEeC--CC---cEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCC
Q 045370 3 FSDDGFLLISGSD--DG---MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGT 77 (350)
Q Consensus 3 ~s~dg~~l~sg~~--dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 77 (350)
..|+++++++... .. +|.+||..+ ...+..+.....+ .++++| ++
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t---------------------------~~~~~~i~~g~~p--~i~~sp-Dg 77 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGS---------------------------GSILGHVNGGFLP--NPVAAH-SG 77 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCC---------------------------CeEEEEecCCCCC--CeEECC-CC
Confidence 3578887777653 22 789999873 3334444333333 788866 66
Q ss_pred cEEEEEe----------CCCcEEEEeCCCCceEEEEecC--------CceeEEEEcCCCcEEEEEcc--CCeEEEEeCCc
Q 045370 78 TFFVSSS----------LDATCKVWDLGSGILIQTQVYP--------QAVTAIAFHPGEQLLFAGSI--DGRIFVSPLKF 137 (350)
Q Consensus 78 ~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~ 137 (350)
++++.+. .++.|.+||..+.+.+..+... .....+.|+|+|++|+++.. ++.|.++| .+
T Consensus 78 ~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 78 SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 6666654 3678999999998888776543 23568999999999998874 47899999 86
Q ss_pred ccccccccccccccee-eeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEE
Q 045370 138 LLLEDHFIVGEDQHSV-LKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRR 193 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~ 193 (350)
++... . +.. .. ++.+.|.+ +++.+.||.+.++|. +++.+..
T Consensus 157 ~~~~~----------~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~ 201 (373)
T 2mad_H 157 GSSDD----------QLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA 201 (373)
T ss_pred CCEEe----------EEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE
Confidence 54321 2 211 11 23444444 777888999999999 8776643
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.72 E-value=9.8e-06 Score=66.56 Aligned_cols=179 Identities=11% Similarity=-0.045 Sum_probs=105.8
Q ss_pred CeecCCCCEEE-EEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLI-SGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
++|++++..|+ +-..++.|.+++... ...............++++.+.++.+
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g---------------------------~~~~~~~~~~~~~p~~ia~d~~~~~l 93 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHG---------------------------GEPTTIIRQDLGSPEGIALDHLGRTI 93 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSS---------------------------CCCEEEECTTCCCEEEEEEETTTTEE
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCC---------------------------CCcEEEEECCCCCccEEEEEecCCeE
Confidence 46777655444 444567888888762 11111111222467888887656666
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEecC-CceeEEEEcCCCcEEEEEcc---CCeEEEEeCCccccccccccccccceeee
Q 045370 80 FVSSSLDATCKVWDLGSGILIQTQVYP-QAVTAIAFHPGEQLLFAGSI---DGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
+++-...+.|.++++............ .....++++|++..|+.+.. .+.|..+++..... .....
T Consensus 94 yv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~----------~~~~~ 163 (267)
T 1npe_A 94 FWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR----------RILAQ 163 (267)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC----------EEEEC
T ss_pred EEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc----------EEEEE
Confidence 667677789999998754333223222 46789999997666655543 36888887752110 00111
Q ss_pred ccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 156 GHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
........++++|++ +++-...+.|.++|+........+.. ......++.. +..|+.+...
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~ 227 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWK 227 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETT
T ss_pred CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECC
Confidence 223467899999965 45555678999999986544333332 2334566654 4555555544
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.71 E-value=2.8e-07 Score=82.79 Aligned_cols=138 Identities=12% Similarity=0.020 Sum_probs=94.2
Q ss_pred CcEEEEeCCC--Cce-EEEEecCCceeEEEEcCCCcEEEEEc-cCCeEEEEeCCccccc--cccccccccceeeeccCCc
Q 045370 87 ATCKVWDLGS--GIL-IQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPLKFLLLE--DHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 87 ~~v~vwd~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~ 160 (350)
+.|.+.|..+ ++. +..+.......++.++|||+++++++ .+..|.++|+.+.... ............. .-...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCC
Confidence 4589999998 655 66777777889999999999887766 5689999999965311 0000011111111 22356
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCC----------ceEEEEeccCCCce-----eEEEEEccCCeEEeeecC--cc
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTR----------RVSIRRFNHKKGVV-----TNLVVIRQSSLLSEVSNC--QR 221 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~~v-----~~l~~~~~~~~l~~~~~~--~~ 221 (350)
...++|+|+| +++.-.|+.|.+||+.+ .+.+.++..|..+- .++.++|||++|+++..- ++
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr 412 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDR 412 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTS
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccc
Confidence 7889999999 55666899999999987 56788877664432 334568999999976643 44
Q ss_pred cccc
Q 045370 222 KLKK 225 (350)
Q Consensus 222 ~~~~ 225 (350)
.+.+
T Consensus 413 ~~~~ 416 (595)
T 1fwx_A 413 FLNV 416 (595)
T ss_dssp SCCC
T ss_pred cccC
Confidence 4433
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.65 E-value=2.8e-06 Score=79.59 Aligned_cols=129 Identities=10% Similarity=0.121 Sum_probs=85.1
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCC----------------------------------------ceeEEEEcCCC
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQVYPQ----------------------------------------AVTAIAFHPGE 118 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~----------------------------------------~v~~~~~~~~~ 118 (350)
.++.++.+|.+.++|..+|+.+....... .-..++|+|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 68899999999999999999875433211 01126888888
Q ss_pred cEEEEEcc---------------------------------------------CCeEEEEeCCcccccccccccccccee
Q 045370 119 QLLFAGSI---------------------------------------------DGRIFVSPLKFLLLEDHFIVGEDQHSV 153 (350)
Q Consensus 119 ~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~ 153 (350)
.++++.+. +|.|..||+.+++....
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~---------- 470 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWE---------- 470 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEE----------
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeE----------
Confidence 88877643 36677888876554322
Q ss_pred eeccCCceEEEEec-CCe-EEEEeCCCcEEEEECCCceEEEEeccCCC-ceeEEEEEccCC-eEEeeec
Q 045370 154 LKGHNGSITALAFS-ASH-LISASEDKTVCLWDVTRRVSIRRFNHKKG-VVTNLVVIRQSS-LLSEVSN 218 (350)
Q Consensus 154 ~~~~~~~i~~~~~~-~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~~-~l~~~~~ 218 (350)
+..+. ++..-.+. ..+ ++.|+.||.|+.||.++|+.+.++....+ ...-+.|..+|+ ++++.++
T Consensus 471 ~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 471 VPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 22221 12212222 334 88899999999999999999999874332 234567888886 5554444
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=2.1e-06 Score=77.14 Aligned_cols=224 Identities=11% Similarity=0.003 Sum_probs=137.2
Q ss_pred CCCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccceeee-ccccCCceEEEEee-CCCcEEE
Q 045370 5 DDGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS-LEHKSSVTGLLTIS-GGTTFFV 81 (350)
Q Consensus 5 ~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~~l~ 81 (350)
+||++|+.... ++.|.+.|+.+ .+....+ ......+..+++.. +++.+++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t---------------------------~~~~~ii~ip~g~~phg~~~~~~p~~~~v~ 151 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDV---------------------------MKCDAILEIPNAKGIHGLRPQKWPRSNYVF 151 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTT---------------------------TEEEEEEECSSCCSEEEEEECCSSBCSEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCC---------------------------ceEeeEEeCCCCCCCcceeeeecCCCcEEE
Confidence 37887776665 55799999883 3333322 12234466777654 5677776
Q ss_pred EEe------------------CCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCC---------------
Q 045370 82 SSS------------------LDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDG--------------- 128 (350)
Q Consensus 82 s~~------------------~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------- 128 (350)
.++ .++.+.+.|..+.+....+...+....++++|+|+++++.+.+.
T Consensus 152 ~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d 231 (595)
T 1fwx_A 152 CNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD 231 (595)
T ss_dssp EEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE
T ss_pred EecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccc
Confidence 663 35679999999999988887656778899999999999988653
Q ss_pred eEEEEeCCccccc----------cccccc-----ccc-ceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCce
Q 045370 129 RIFVSPLKFLLLE----------DHFIVG-----EDQ-HSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRV 189 (350)
Q Consensus 129 ~i~i~d~~~~~~~----------~~~~~~-----~~~-~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~ 189 (350)
.|.+.|....... ....+. ... ...+.. .....++.++|+| ++++..+.+|.++|+.+.+
T Consensus 232 ~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 232 HIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFD 310 (595)
T ss_dssp EEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHH
T ss_pred eEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccc
Confidence 3555554322100 000000 011 112211 2345678999999 6666678899999999753
Q ss_pred ------------EEEEeccCCCceeEEEEEccCCeEEeeecCccccccccCCc-------------cccC----------
Q 045370 190 ------------SIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKKDRMPS-------------LEKY---------- 234 (350)
Q Consensus 190 ------------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~---------- 234 (350)
.+.++.. ......++|+|+| .+.+...-+..+..|++.. ..+.
T Consensus 311 ~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 311 AVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp HHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred cccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 4555543 3456889999999 6665554332222232111 1111
Q ss_pred -CCCccccccceEEeeccccCCCCc
Q 045370 235 -PQLNSLSMEMVILLQSCFFNKDDQ 258 (350)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~ 258 (350)
......+.+++.++....+++|.+
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred eccceEeCCCCCEEEEcCCCCcccc
Confidence 122345677888888888887776
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.62 E-value=4.1e-06 Score=78.81 Aligned_cols=180 Identities=13% Similarity=0.069 Sum_probs=105.8
Q ss_pred CeecCCCCEEEEEeCCCc-------------EEEEeCccccccccccccccccccccEEEeeccccccceeeecc-ccCC
Q 045370 1 MVFSDDGFLLISGSDDGM-------------ICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLE-HKSS 66 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~ 66 (350)
++|+ ||+.|+.++.+.. |++|++.+... ....+..... |...
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-----------------------~~~~v~~~~~~~~~~ 235 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-----------------------DDRLVFGAIPAQHHR 235 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-----------------------GCEEEESCSGGGCCS
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-----------------------cceEEEecCCCCCeE
Confidence 5799 9999998888743 88888763110 0112222233 4455
Q ss_pred ceEEEEeeCCCcEEE-EEeC---CCcEEEEeCCCC--ceEEEEecCCceeEEEEcCCCcEEE-EEccC---CeEEEEeCC
Q 045370 67 VTGLLTISGGTTFFV-SSSL---DATCKVWDLGSG--ILIQTQVYPQAVTAIAFHPGEQLLF-AGSID---GRIFVSPLK 136 (350)
Q Consensus 67 v~~~~~~~~~~~~l~-s~~~---d~~v~vwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d---g~i~i~d~~ 136 (350)
..++.|++ ++++++ +.+. +..|.++|+.++ .......+....... |++++..|+ ....+ +.|..+|+.
T Consensus 236 ~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 236 YVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp EEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred EEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 67788865 566554 4332 257999999876 334434444444444 566666554 44333 689999988
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCe--EEEEe-CCC--cEEEEECCCceEEEEec-cCCCceeEEEEEccC
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISAS-EDK--TVCLWDVTRRVSIRRFN-HKKGVVTNLVVIRQS 210 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~-~dg--~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~ 210 (350)
.+... ....+..|...+. .|++++ |+... .++ .|++||+..+. ...+. ...+.+..+.++|++
T Consensus 314 ~~~~~--------~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~ 382 (693)
T 3iuj_A 314 NPGPA--------HWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDD 382 (693)
T ss_dssp SCCGG--------GCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTC
T ss_pred CCCcc--------ccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCC
Confidence 64321 1123444554444 666665 54444 454 68999988554 44443 344567777888888
Q ss_pred CeEEeee
Q 045370 211 SLLSEVS 217 (350)
Q Consensus 211 ~~l~~~~ 217 (350)
..++...
T Consensus 383 ~~l~~~~ 389 (693)
T 3iuj_A 383 PALYFGF 389 (693)
T ss_dssp SCEEEEE
T ss_pred CEEEEEe
Confidence 7655443
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.59 E-value=2.2e-06 Score=80.17 Aligned_cols=126 Identities=10% Similarity=0.147 Sum_probs=86.5
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCC------------ce------------------------eEEEEcCCCcEE
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQ------------AV------------------------TAIAFHPGEQLL 121 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~------------~v------------------------~~~~~~~~~~~l 121 (350)
..++.++.+|.|.++|..+|+.+....... ++ ..++|+|+..++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 678999999999999999999887754221 01 156889988888
Q ss_pred EEEccC-------------------------------------------CeEEEEeCCccccccccccccccceeeeccC
Q 045370 122 FAGSID-------------------------------------------GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 122 ~~~~~d-------------------------------------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++...+ |.|..||+.+++..... . +.
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~----------~-~~ 476 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV----------E-HV 476 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE----------E-ES
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec----------C-CC
Confidence 876432 67888888866543321 1 11
Q ss_pred CceEEEEecCC-e-EEEEeCCCcEEEEECCCceEEEEeccCC-CceeEEEEEccCCeEE
Q 045370 159 GSITALAFSAS-H-LISASEDKTVCLWDVTRRVSIRRFNHKK-GVVTNLVVIRQSSLLS 214 (350)
Q Consensus 159 ~~i~~~~~~~~-~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~ 214 (350)
.++....+... + ++.++.||.+++||.++++.+.++.... ....-+.|.++|+.++
T Consensus 477 ~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 477 SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 22223333333 3 7788999999999999999999987432 2334566788887444
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.57 E-value=1.8e-06 Score=74.15 Aligned_cols=85 Identities=8% Similarity=-0.011 Sum_probs=60.4
Q ss_pred EEEcCCCcEEEEEcc-C--------CeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEe-CCC
Q 045370 112 IAFHPGEQLLFAGSI-D--------GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISAS-EDK 178 (350)
Q Consensus 112 ~~~~~~~~~l~~~~~-d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~-~dg 178 (350)
++++|+++.++++.. + +.+.++|+.+.+... .+... .....++|+|++ +++.. .++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~----------~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~ 337 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG----------PISNG-HDSDAIIAAQDGASDNYANSAGTE 337 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE----------CCEEE-EEECEEEECCSSSCEEEEEETTTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE----------EEECC-CCcceEEECCCCCEEEEEccCCCC
Confidence 679999988887643 2 356699998654332 33222 257889999998 56666 589
Q ss_pred cEEEEECCCceEEEEeccCCCceeEEEEEc
Q 045370 179 TVCLWDVTRRVSIRRFNHKKGVVTNLVVIR 208 (350)
Q Consensus 179 ~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 208 (350)
.|.++|+.+++.+.++.... ....+++.+
T Consensus 338 ~VsVID~~t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 338 VLDIYDAASDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp EEEEEESSSCEEEEECCCCS-CCCEEECCC
T ss_pred eEEEEECCCCcEEEEEECCC-CCCEEEeec
Confidence 99999999999999998543 345666544
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.56 E-value=2.7e-06 Score=73.07 Aligned_cols=82 Identities=16% Similarity=-0.044 Sum_probs=59.7
Q ss_pred cccceeeeccccCCceEEEEeeCCCcEEEEEe----------CCCcEEEEeCCCCceEEEEecC--------CceeEEEE
Q 045370 53 LRSLLHYSLEHKSSVTGLLTISGGTTFFVSSS----------LDATCKVWDLGSGILIQTQVYP--------QAVTAIAF 114 (350)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~--------~~v~~~~~ 114 (350)
....+..+.....+ .+.+++ ++.+++.+. .++.|.+||+.+++.+..+... .....+.+
T Consensus 55 t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 55 CGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 45555555444445 788866 555555554 4789999999999999987643 34678999
Q ss_pred cCCCcEEEEEcc--CCeEEE--EeCCc
Q 045370 115 HPGEQLLFAGSI--DGRIFV--SPLKF 137 (350)
Q Consensus 115 ~~~~~~l~~~~~--dg~i~i--~d~~~ 137 (350)
+|||++++++.. +..+.+ +|..+
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 999999998864 467888 88854
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.53 E-value=5.3e-06 Score=72.52 Aligned_cols=170 Identities=12% Similarity=0.043 Sum_probs=108.0
Q ss_pred CCCCEEEEEeC-C----CcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 5 DDGFLLISGSD-D----GMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 5 ~dg~~l~sg~~-d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
+++++++.... + +.|.++|.. ....+..+..-..+ .+++++ ++++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~---------------------------t~~vv~~I~vG~~P--gia~Sp-Dgk~ 131 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS---------------------------TGRILGMTDGGFLP--HPVAAE-DGSF 131 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT---------------------------TTEEEEEEEECSSC--EEEECT-TSSC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC---------------------------CCEEEEEEECCCCC--ceEECC-CCCE
Confidence 56776665554 2 699999998 35555555444444 788866 5555
Q ss_pred EEEEe----------CCCcEEEEeCCCCceEEEEecC--------CceeEEEEcCCCcEEEEEcc--CCeEEEEeCCccc
Q 045370 80 FVSSS----------LDATCKVWDLGSGILIQTQVYP--------QAVTAIAFHPGEQLLFAGSI--DGRIFVSPLKFLL 139 (350)
Q Consensus 80 l~s~~----------~d~~v~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~ 139 (350)
++.+. .++.|.++|..+++.+..+... .....+.|+|+|++++++.. ++.|.++|+.+.+
T Consensus 132 lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 132 FAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred EEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 55443 4678999999999998887543 34678999999999999874 5789999999765
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEE----eccCCCce-eEEEEEccCC
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRR----FNHKKGVV-TNLVVIRQSS 211 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~~l~~~~~~~ 211 (350)
... .+.-.. +....|++ +++.+.||.+.+.+..+++.... +.....++ ..+.|.+++.
T Consensus 212 vv~----------~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 212 FDR----------MLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEE----------EEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEE----------EEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 433 222111 12334443 67777888888888866655432 22111221 2345677766
Q ss_pred eEEeeec
Q 045370 212 LLSEVSN 218 (350)
Q Consensus 212 ~l~~~~~ 218 (350)
.++..+.
T Consensus 278 ~~~~~s~ 284 (426)
T 3c75_H 278 RLVWPTY 284 (426)
T ss_dssp EEEEEBT
T ss_pred EEEEEeC
Confidence 5443333
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.52 E-value=6e-05 Score=61.80 Aligned_cols=145 Identities=13% Similarity=-0.004 Sum_probs=93.2
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEec-CCceeEEEEcCCCcEEEE-EccCCeEEEEeCCcccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-PQAVTAIAFHPGEQLLFA-GSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~ 142 (350)
..+.++++.+.++.++++-..++.|..+++..+........ ......+++++++..++. -...+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 45678888776667777777788999999987654433332 246789999997655554 45568999998763211
Q ss_pred ccccccccceeeeccCCceEEEEecCC-e-EEEEeC---CCcEEEEECCCceEEEEe-ccCCCceeEEEEEccCCeEEee
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSAS-H-LISASE---DKTVCLWDVTRRVSIRRF-NHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-l~s~~~---dg~v~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
.............++++|+ + |+.+.. .+.|..+++.... ...+ .........++++|++..|+.+
T Consensus 114 --------~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 114 --------RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp --------EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred --------EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence 0011112245789999995 4 555543 3688888876432 2222 1223457899999998777666
Q ss_pred ecCc
Q 045370 217 SNCQ 220 (350)
Q Consensus 217 ~~~~ 220 (350)
....
T Consensus 185 d~~~ 188 (267)
T 1npe_A 185 DAGT 188 (267)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 6543
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=1.7e-05 Score=68.90 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=113.5
Q ss_pred CCCCEEEE-EeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec------c-ccCCceEEEEeeCC
Q 045370 5 DDGFLLIS-GSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL------E-HKSSVTGLLTISGG 76 (350)
Q Consensus 5 ~dg~~l~s-g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~~~~~~~~ 76 (350)
+++++|+. |..++.|.|+|+.+.... ......+. . .......+...+ +
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-----------------------p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-d 148 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-----------------------PKIIKVIEPEEVKKVSGYSRLHTVHCGP-D 148 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-----------------------CEEEEEECHHHHHHHHCEEEEEEEEECS-S
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-----------------------ceeeeeechhhcccccCCCcccceeECC-C
Confidence 77877655 556899999998631110 01111110 0 011233444434 5
Q ss_pred CcEEEEEeCC------CcEEEEeCCCCceEEEEecC----CceeEEEEcCCCcEEEEEc-------------------cC
Q 045370 77 TTFFVSSSLD------ATCKVWDLGSGILIQTQVYP----QAVTAIAFHPGEQLLFAGS-------------------ID 127 (350)
Q Consensus 77 ~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------------------~d 127 (350)
+ +++++..+ +.|.+.|..+++++..+... .-...+-|+|+++.+++.. .+
T Consensus 149 G-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~ 227 (462)
T 2ece_A 149 A-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYG 227 (462)
T ss_dssp C-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSC
T ss_pred e-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccC
Confidence 5 66666555 78999999999999887532 2244688899999888884 36
Q ss_pred CeEEEEeCCccccccccccccccceeeec--cCCceEEEEe--cCCe---EEEEe-----CCCcEEEEECCCceE--EEE
Q 045370 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKG--HNGSITALAF--SASH---LISAS-----EDKTVCLWDVTRRVS--IRR 193 (350)
Q Consensus 128 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~--~~~~---l~s~~-----~dg~v~iwd~~~~~~--~~~ 193 (350)
..|.+||+.+.+... .+.. .......+.| +|++ ++++- .+++|.+|....+.. ...
T Consensus 228 d~V~v~D~~~~k~~~----------tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 228 NRIHFWDLRKRKRIH----------SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp CEEEEEETTTTEEEE----------EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred CEEEEEECCCCcEee----------EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 899999998643322 2221 1123444545 9988 44444 567888776654431 111
Q ss_pred e--ccC----------------CCceeEEEEEccCCeEEeeecCccccccc
Q 045370 194 F--NHK----------------KGVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 194 ~--~~~----------------~~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
+ ... ......+.++|||++|.++......+.+.
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavf 348 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQY 348 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEE
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEE
Confidence 1 110 23578899999999999887764444443
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.50 E-value=5.8e-06 Score=69.96 Aligned_cols=140 Identities=10% Similarity=0.010 Sum_probs=89.5
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
...+.++...+ ++. +..++ +.|..+| .+++...... ....+.++..++++. +++++.++.+..+|... ...
T Consensus 176 ~~~~~~~~~d~-~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~- 247 (330)
T 3hxj_A 176 DAITSAASIGK-DGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEK- 247 (330)
T ss_dssp SCCCSCCEECT-TCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEE-
T ss_pred CCceeeeEEcC-CCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEe-
Confidence 34455555433 444 44444 7899999 6777666554 335678888887765 55566678888887432 111
Q ss_pred ccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
..+......+..+...+++ |..++.+|.|..+|. +++.+..+......+.++...+++.+.+ ++.++.
T Consensus 248 ---------~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~ 316 (330)
T 3hxj_A 248 ---------WRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGK 316 (330)
T ss_dssp ---------EEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSC
T ss_pred ---------EEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCe
Confidence 1222222333345566666 888999999999996 6777777765556677888888888777 555543
Q ss_pred c
Q 045370 222 K 222 (350)
Q Consensus 222 ~ 222 (350)
+
T Consensus 317 ~ 317 (330)
T 3hxj_A 317 F 317 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.43 E-value=2e-05 Score=66.71 Aligned_cols=186 Identities=10% Similarity=-0.036 Sum_probs=106.2
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccc--------ccceeeeccccCCceEEEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSL--------RSLLHYSLEHKSSVTGLLT 72 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~h~~~v~~~~~ 72 (350)
++|+++|++++++..++.|..||....... .+..... .............+.++++
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~ 87 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFV----------------DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY 87 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEE----------------EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceE----------------EEecccccccccccccccchhccccCCCCceEEE
Confidence 468889987888888999999987621000 0000000 0000000011235678887
Q ss_pred eeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-----cCCceeEEEEcC-CCcEEEEEcc-----------------CCe
Q 045370 73 ISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-----YPQAVTAIAFHP-GEQLLFAGSI-----------------DGR 129 (350)
Q Consensus 73 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~ 129 (350)
.+.++. |+.+...+.|..+|..++....... .......+++++ +|+..++-.. ++.
T Consensus 88 ~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 88 NLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp ETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred cCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce
Confidence 653555 4444444558888887654322211 113467899999 8876665432 367
Q ss_pred EEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEE-eCCCcEEEEECCCc-----eEEEEeccCCCce
Q 045370 130 IFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISA-SEDKTVCLWDVTRR-----VSIRRFNHKKGVV 201 (350)
Q Consensus 130 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~-~~dg~v~iwd~~~~-----~~~~~~~~~~~~v 201 (350)
|..||...+... .+.......+.++++|++ |+.+ ..++.|.+|++... +.... ..+ .
T Consensus 167 v~~~d~~~~~~~-----------~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P 231 (322)
T 2fp8_A 167 LIKYDPSTKETT-----------LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-P 231 (322)
T ss_dssp EEEEETTTTEEE-----------EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-E
T ss_pred EEEEeCCCCEEE-----------EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-C
Confidence 888887543221 111112345678999987 4444 55689999998742 22222 223 6
Q ss_pred eEEEEEccCCeEEeeec
Q 045370 202 TNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 202 ~~l~~~~~~~~l~~~~~ 218 (350)
..+++.++|.+.++...
T Consensus 232 ~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEECTTSCEEEEEEE
T ss_pred CCeEECCCCCEEEEecC
Confidence 88999999987775543
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.39 E-value=1.5e-05 Score=67.39 Aligned_cols=142 Identities=13% Similarity=0.004 Sum_probs=91.2
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEec-CCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY-PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
...+.++...+ ++. +..++.++.|..+|.. ++....... ...+.++.+++++..+ .++ +.|..+| .++...
T Consensus 136 ~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~- 207 (330)
T 3hxj_A 136 KAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEK- 207 (330)
T ss_dssp SCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEE-
T ss_pred CceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEE-
Confidence 33444554433 444 6677888999999999 777666553 3456777777777654 444 7889998 533221
Q ss_pred ccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcc
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQR 221 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~ 221 (350)
.........+.++...+++ +..++.++.|..+|. ++..+..+......+.++.+.+++.+.+ ++.++.
T Consensus 208 ---------~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~gg 276 (330)
T 3hxj_A 208 ---------WNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYF-GSYDGH 276 (330)
T ss_dssp ---------EEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEE-ECTTCE
T ss_pred ---------EEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEE-ecCCCC
Confidence 1222333567788888887 888888889999985 5666666664444455666766776665 555544
Q ss_pred ccc
Q 045370 222 KLK 224 (350)
Q Consensus 222 ~~~ 224 (350)
+..
T Consensus 277 l~~ 279 (330)
T 3hxj_A 277 LYA 279 (330)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=0.00015 Score=61.26 Aligned_cols=147 Identities=7% Similarity=-0.097 Sum_probs=88.0
Q ss_pred CceEEEEeeCCCcEEEEEeC-----------------CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccC
Q 045370 66 SVTGLLTISGGTTFFVSSSL-----------------DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SID 127 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~-----------------d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 127 (350)
....+++.+.++.++++-.. ++.|..||..+++.......-.....++++|+++.|+++ +.+
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGG
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCC
Confidence 35667775424555554322 367888898777654443333456789999999876665 556
Q ss_pred CeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeC-----------CCcEEEEECCCceEEEEec
Q 045370 128 GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASE-----------DKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 128 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~-----------dg~v~iwd~~~~~~~~~~~ 195 (350)
+.|..|++....... ...+....+ ...+++.+++ |..+.. .+.|..+|.. ++.+..+.
T Consensus 207 ~~I~~~~~~~~~~~~--------~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~ 276 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGT--------AEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIP 276 (322)
T ss_dssp TEEEEEESSSTTTTC--------EEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEE
T ss_pred CeEEEEECCCCcCCc--------cceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEE
Confidence 899999987421110 011111223 7889999998 544443 3678888874 77777665
Q ss_pred cC----CCceeEEEEEccCCeEEeeecCcccc
Q 045370 196 HK----KGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 196 ~~----~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
.. ...++++++ .++.++++.....++.
T Consensus 277 ~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 277 LPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVG 307 (322)
T ss_dssp CCTTTTTSCCCEEEE-ETTEEEEECSSCSEEE
T ss_pred CCCCCccccceEEEE-eCCEEEEeecCCCceE
Confidence 33 235677766 4565555443444443
No 243
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.29 E-value=0.00036 Score=59.61 Aligned_cols=150 Identities=13% Similarity=-0.016 Sum_probs=88.5
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEE-ccC-CeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAG-SID-GRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d-g~i~i~d~~~~~~~ 141 (350)
....++++.+.++.++++-...+.|.+.++.......... .-.....++++|.+..|+.. ... +.|..+++....
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 193 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-- 193 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--
Confidence 4557788876667777777777899999987554333332 23457899999966555444 444 788888876311
Q ss_pred cccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
........-...+.++++|++ +++-...+.|..+|+........+........++++. .+.++.+-..
T Consensus 194 --------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 194 --------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp --------CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred --------cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 111111223467899999755 4444456789999987533222233234456778773 3433333333
Q ss_pred Ccccccc
Q 045370 219 CQRKLKK 225 (350)
Q Consensus 219 ~~~~~~~ 225 (350)
..++..+
T Consensus 265 ~~~V~~~ 271 (349)
T 3v64_C 265 TKSINSA 271 (349)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 3444433
No 244
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.28 E-value=5.8e-05 Score=65.25 Aligned_cols=133 Identities=8% Similarity=-0.001 Sum_probs=85.3
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeecc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGH 157 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 157 (350)
..++.++.++.+..+|..+++.+....... ...+.. ++..+++++.++.+..+|..+++....... ..
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~---------~~ 307 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSD---------LL 307 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECT---------TT
T ss_pred CEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecc---------cC
Confidence 457777889999999999999887665433 334444 467788888899999999987654321110 11
Q ss_pred CCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 158 NGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 158 ~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
...+.......+.++.++.+|.|+.+|..+++.+.........+.+.....++ .|+.++.++.+.
T Consensus 308 ~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~-~l~v~~~~G~l~ 372 (376)
T 3q7m_A 308 HRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADG-KLLIQAKDGTVY 372 (376)
T ss_dssp TSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETT-EEEEEBTTSCEE
T ss_pred CCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECC-EEEEEeCCCEEE
Confidence 11222233334448889999999999999999988876533433332222344 444466555443
No 245
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.25 E-value=0.00026 Score=61.49 Aligned_cols=150 Identities=13% Similarity=-0.017 Sum_probs=88.4
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEc-cC-CeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGS-ID-GRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~ 141 (350)
.....+++.+.++.++++-...+.|.+.++........+. .-.....++++|.+..|+.+. .. +.|..+++....
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 236 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-- 236 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--
Confidence 3456777766666777777777889999987554333333 225678999998766555544 34 678888776211
Q ss_pred cccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
........-...+.|+++|++ +++-+..+.|..+|+........+.........+++ ..+.++.+...
T Consensus 237 --------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 307 (386)
T 3v65_B 237 --------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 307 (386)
T ss_dssp --------CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred --------cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCC
Confidence 111122233457899999755 444456678999998753322223323445677888 33444443333
Q ss_pred Ccccccc
Q 045370 219 CQRKLKK 225 (350)
Q Consensus 219 ~~~~~~~ 225 (350)
..++..+
T Consensus 308 ~~~V~~~ 314 (386)
T 3v65_B 308 TKSINSA 314 (386)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 3444433
No 246
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.24 E-value=0.00041 Score=56.04 Aligned_cols=192 Identities=13% Similarity=0.120 Sum_probs=112.6
Q ss_pred CeecCCCCEE-EEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeec-cccCCceEEEEeeCCCc
Q 045370 1 MVFSDDGFLL-ISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSL-EHKSSVTGLLTISGGTT 78 (350)
Q Consensus 1 i~~s~dg~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 78 (350)
|+|+|++..| ++...++.|...|.. +.....+. .-....-+|++.. ++.
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~----------------------------g~v~~~i~l~g~~D~EGIa~~~-~g~ 82 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN----------------------------GDLIRTIPLDFVKDLETIEYIG-DNQ 82 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT----------------------------CCEEEEEECSSCSSEEEEEECS-TTE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC----------------------------CCEEEEEecCCCCChHHeEEeC-CCE
Confidence 4788876644 456677888887776 22333221 2224566777764 556
Q ss_pred EEEEEeCCCcEEEEeCCCCce---EEEEe-------cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccc-cccc
Q 045370 79 FFVSSSLDATCKVWDLGSGIL---IQTQV-------YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDH-FIVG 147 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~---~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~ 147 (350)
++++.-.++.+.++++..... +.... .......++|+|.++.|+++.......+|.+. +..... ....
T Consensus 83 ~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~~~~~~l~i~ 161 (255)
T 3qqz_A 83 FVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GLLSSNELHIS 161 (255)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-STTCSSCCEEE
T ss_pred EEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-ccccCCceeee
Confidence 666665677888888765442 22222 12346899999999888877766555555544 110000 0000
Q ss_pred cccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCC---------CceeEEEEEccCCeEEe
Q 045370 148 EDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKK---------GVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 148 ~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~v~~l~~~~~~~~l~~ 215 (350)
......-..+...+.+++++|.. ++.......|.++|.. ++.+..+.-.. ...-.|+|.++|++.+
T Consensus 162 ~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI- 239 (255)
T 3qqz_A 162 KDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI- 239 (255)
T ss_dssp ECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-
T ss_pred cchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-
Confidence 00000001123457889999876 6666678889999976 55655553221 2568899999998666
Q ss_pred eecCccccc
Q 045370 216 VSNCQRKLK 224 (350)
Q Consensus 216 ~~~~~~~~~ 224 (350)
.+.....+.
T Consensus 240 vsE~n~~y~ 248 (255)
T 3qqz_A 240 VSEPNRFYR 248 (255)
T ss_dssp EETTTEEEE
T ss_pred EcCCceEEE
Confidence 465554443
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.22 E-value=0.00015 Score=62.58 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=110.3
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccc---cc-----------cccccEEEeeccccccceeeeccccCCc----
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHH---SD-----------QLDQRLIEMELRSLRSLLHYSLEHKSSV---- 67 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~h~~~v---- 67 (350)
++..++.++.++.|..+|..++.......... .. ..++.++.++... +......... .++
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~t-G~~~W~~~~~-~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEAD-GAVKWTVNLD-MPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTT-CCEEEEEECC-C-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCC-CcEEEEEeCC-CCceeec
Confidence 46678888899999999988654332211110 00 1122333333222 1211111111 111
Q ss_pred --eEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCce-----eE---EEEcC--CCcEEEEEccCCeEEEEeC
Q 045370 68 --TGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAV-----TA---IAFHP--GEQLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 68 --~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v-----~~---~~~~~--~~~~l~~~~~dg~i~i~d~ 135 (350)
..... . +..++.++.++.|..+|..+|+.+.......+. .. +...| .+..+++++.++.+..+|.
T Consensus 180 ~~~~~~~-~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 180 GESAPTT-A--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp CCCCCEE-E--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred CCCCcEE-E--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 11111 1 235777888999999999999988776533210 00 11111 3567788888999999999
Q ss_pred CccccccccccccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEecc-CCCceeEEEEEccCCeEE
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNH-KKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~ 214 (350)
.+++..... .......+....+.++.++.++.|..+|..+++.+..... ....+...... +..|+
T Consensus 257 ~tG~~~w~~------------~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~ 322 (376)
T 3q7m_A 257 RSGQIMWKR------------ELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLV 322 (376)
T ss_dssp TTCCEEEEE------------CCCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEE
T ss_pred CCCcEEeec------------cCCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEE
Confidence 876543211 1123445555545588888899999999999998887752 22233333332 34455
Q ss_pred eeecCccc
Q 045370 215 EVSNCQRK 222 (350)
Q Consensus 215 ~~~~~~~~ 222 (350)
.++.++.+
T Consensus 323 v~~~~g~l 330 (376)
T 3q7m_A 323 VGDSEGYL 330 (376)
T ss_dssp EECTTSEE
T ss_pred EEeCCCeE
Confidence 45555433
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.21 E-value=0.00012 Score=67.04 Aligned_cols=131 Identities=14% Similarity=0.135 Sum_probs=82.1
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCCce----------------------------------------------eE
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQAV----------------------------------------------TA 111 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v----------------------------------------------~~ 111 (350)
..++.++.+|.+.++|..+|+.+........+ ..
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 416 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNP 416 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSC
T ss_pred EEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCC
Confidence 46888999999999999999988765432100 13
Q ss_pred EEEcCCCcEEEEEc---------------------------------cCCeEEEEeCCccccccccccccccceeeeccC
Q 045370 112 IAFHPGEQLLFAGS---------------------------------IDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN 158 (350)
Q Consensus 112 ~~~~~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 158 (350)
++++|+...+++.. .+|.|..||+.+++........ .....
T Consensus 417 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~------~~~~~ 490 (582)
T 1flg_A 417 MAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH------LPLWA 490 (582)
T ss_dssp CEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES------SCCCS
T ss_pred ceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC------CCCcc
Confidence 45666555555433 2577888888766543221110 00011
Q ss_pred CceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCce-eEEEEEccCC-eEEeeec
Q 045370 159 GSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVV-TNLVVIRQSS-LLSEVSN 218 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~~-~l~~~~~ 218 (350)
.. +. ...+ ++.|+.||.++.||.++|+.+.++....+.. .-+.|..+|+ ++++.+.
T Consensus 491 g~---~~-tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 491 GV---LA-TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp CC---EE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred cc---eE-eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 11 11 2344 7779999999999999999999987533322 2367778886 5554444
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=0.00012 Score=68.59 Aligned_cols=151 Identities=9% Similarity=0.023 Sum_probs=93.3
Q ss_pred EEEEeeCCCcEEEEEeCCC-------------------cEEEEeCCCCceEEEEecC----------CceeEEEEcCCC-
Q 045370 69 GLLTISGGTTFFVSSSLDA-------------------TCKVWDLGSGILIQTQVYP----------QAVTAIAFHPGE- 118 (350)
Q Consensus 69 ~~~~~~~~~~~l~s~~~d~-------------------~v~vwd~~~~~~~~~~~~~----------~~v~~~~~~~~~- 118 (350)
.+++.+ +...++.+..++ +|..+|..+|+.+..+... .....+....+|
T Consensus 247 ~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 455655 445666665553 5999999999998876521 122333344477
Q ss_pred --cEEEEEccCCeEEEEeCCcccccccccccccc-ceeeeccCCce------------------------EEEEecCCe-
Q 045370 119 --QLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQ-HSVLKGHNGSI------------------------TALAFSASH- 170 (350)
Q Consensus 119 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~i------------------------~~~~~~~~~- 170 (350)
..++.++.+|.++++|..+++........... ...+.....++ ..++++|+.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 68899999999999999988765332211100 00000000000 146778765
Q ss_pred -EEEEeC-------------------------------------------CCcEEEEECCCceEEEEeccCCCceeEEEE
Q 045370 171 -LISASE-------------------------------------------DKTVCLWDVTRRVSIRRFNHKKGVVTNLVV 206 (350)
Q Consensus 171 -l~s~~~-------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~ 206 (350)
+++... .|.|..||+.+++.+.++. +..++.+..+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~ 484 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTL 484 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcce
Confidence 444322 2789999999999999887 3445566667
Q ss_pred EccCCeEEeeecCcc
Q 045370 207 IRQSSLLSEVSNCQR 221 (350)
Q Consensus 207 ~~~~~~l~~~~~~~~ 221 (350)
...+.+++.++.++.
T Consensus 485 ~~~g~~v~~g~~dg~ 499 (677)
T 1kb0_A 485 TTAGNVVFQGTADGR 499 (677)
T ss_dssp EETTTEEEEECTTSE
T ss_pred EeCCCEEEEECCCCc
Confidence 777777777765543
No 250
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.19 E-value=0.002 Score=54.15 Aligned_cols=150 Identities=13% Similarity=0.008 Sum_probs=88.2
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEcc-C-CeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSI-D-GRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~ 141 (350)
....++++.+.++.++++-...+.|.+.++.......... .-.....++++|.+..|+.+.. . +.|..+++....
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-- 154 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-- 154 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--
Confidence 4567888866566766776778899999987554433333 3356789999996665555443 3 688888765211
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--E-EEEeCCCcEEEEECCCce--EEEEeccCCCceeEEEEEccCCeEEee
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--L-ISASEDKTVCLWDVTRRV--SIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
........-...+.++++|++ | ++-+..+.|..+|+.... .+............+++. .+.++.+.
T Consensus 155 --------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d 225 (316)
T 1ijq_A 155 --------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTD 225 (316)
T ss_dssp --------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEE
T ss_pred --------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEE
Confidence 000111233567899999765 4 444466789999987422 222221123345677775 34444433
Q ss_pred ecCcccccc
Q 045370 217 SNCQRKLKK 225 (350)
Q Consensus 217 ~~~~~~~~~ 225 (350)
....++..+
T Consensus 226 ~~~~~V~~~ 234 (316)
T 1ijq_A 226 IINEAIFSA 234 (316)
T ss_dssp TTTTEEEEE
T ss_pred CCCCeEEEE
Confidence 333444443
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.19 E-value=0.00066 Score=56.79 Aligned_cols=191 Identities=12% Similarity=0.038 Sum_probs=104.5
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEE
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFF 80 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 80 (350)
++|+++|+++++-..++.|..||... ..... ......+.++++.+ ++.++
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g----------------------------~~~~~-~~~~~~p~gia~~~-dG~l~ 86 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDG----------------------------NQQIH-ATVEGKVSGLAFTS-NGDLV 86 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTC----------------------------CEEEE-EECSSEEEEEEECT-TSCEE
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCC----------------------------ceEEE-EeCCCCceeEEEcC-CCcEE
Confidence 47889998777776788999988762 11111 11224577888865 55655
Q ss_pred EEEeCCC--cEEEEeCCCCceEEEEec--CCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccc-eeee
Q 045370 81 VSSSLDA--TCKVWDLGSGILIQTQVY--PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH-SVLK 155 (350)
Q Consensus 81 ~s~~~d~--~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~~ 155 (350)
++..... .|..+|..+++....... ......++..+++..+++-..++.|+.+|...+...... ...... ....
T Consensus 87 vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~-~~~~~~~~~~~ 165 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWL-EHPMLARSNSE 165 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEE-ECGGGSCSSTT
T ss_pred EEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEE-ECCcccccccc
Confidence 5543322 466677777776544332 223445555555555555556889999997642110000 000000 0000
Q ss_pred ccCCceEEEEecCCe---EEEEeCCCcEEEEECCC-ceE--EEEeccCCCceeEEEEEccCCeEEeeecCcccccc
Q 045370 156 GHNGSITALAFSASH---LISASEDKTVCLWDVTR-RVS--IRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 156 ~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~-~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~~~ 225 (350)
..-...+.+ +|++ +++-...+.|..||+.. ++. ...+.. ......++++++|++.++.....++..+
T Consensus 166 ~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 166 SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRI 238 (306)
T ss_dssp CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEE
T ss_pred CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEE
Confidence 111234555 5554 45555678999999874 321 111111 1346788999999877655444444433
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.17 E-value=0.00012 Score=58.96 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=91.6
Q ss_pred cccCCc--eEEEEeeCCCcEEEEEeCCC--cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEc-cCCeEEEEeCC
Q 045370 62 EHKSSV--TGLLTISGGTTFFVSSSLDA--TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPLK 136 (350)
Q Consensus 62 ~h~~~v--~~~~~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~ 136 (350)
.|.... ..+.|. ++.++.+.+.+| .|+++|+.+++.+..+............+++..|+... .++.+.+||..
T Consensus 38 phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 38 PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 555444 778775 457777877776 89999999999999987666665544444566666554 57999999998
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccC--CCc---eeEEEEEccCC
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHK--KGV---VTNLVVIRQSS 211 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~---v~~l~~~~~~~ 211 (350)
+.+... .+.... .-..+++....|+.+..++.|.++|..+.+.+.++... ..+ +..+.|. +|+
T Consensus 116 t~~~~~----------ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 116 NLRQVR----------SFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp TCCEEE----------EEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred cCcEEE----------EEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 655443 222211 11233333222666666788999999999988887632 223 4457776 666
Q ss_pred eEE
Q 045370 212 LLS 214 (350)
Q Consensus 212 ~l~ 214 (350)
+.+
T Consensus 184 lya 186 (262)
T 3nol_A 184 IFA 186 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=0.00099 Score=57.78 Aligned_cols=149 Identities=11% Similarity=-0.075 Sum_probs=94.7
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCcccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 140 (350)
....+..++|.+.++.++++-...+.|..+++..+....... .......+++++.+. ++++-...+.|.+.++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~- 192 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 192 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence 345578899987777777777778899999998765444333 223467889987554 45555567888888876321
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe---EEEEeCC-CcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASED-KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
....+.........++++|.+ +++-... +.|..+++..................|+|+|++..|+.+
T Consensus 193 ---------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 193 ---------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp ---------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEE
T ss_pred ---------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEE
Confidence 111222233567899999855 4443344 788888887533322222233457899999987777766
Q ss_pred ecCcc
Q 045370 217 SNCQR 221 (350)
Q Consensus 217 ~~~~~ 221 (350)
.....
T Consensus 264 D~~~~ 268 (386)
T 3v65_B 264 DAKHH 268 (386)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 65543
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.15 E-value=0.00038 Score=63.68 Aligned_cols=129 Identities=12% Similarity=0.026 Sum_probs=82.2
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecCC--------------ce--------------------------eEEEEcCC
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYPQ--------------AV--------------------------TAIAFHPG 117 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~--------------~v--------------------------~~~~~~~~ 117 (350)
..++.++.+|.+.++|..+|+.+....... ++ ..++++|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 357788899999999999999887754322 11 24578887
Q ss_pred CcEEEEEcc-------------------------------------CCeEEEEeCCccccccccccccccceeeeccCCc
Q 045370 118 EQLLFAGSI-------------------------------------DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 118 ~~~l~~~~~-------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (350)
..++++.+. +|.|..||..+++..... .. ...
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~----------~~-~~~ 465 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTK----------WE-KFA 465 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEE----------EE-SSC
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEe----------cC-CCC
Confidence 777776543 467888887765543221 11 111
Q ss_pred eEEEE-ecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCc-eeEEEEEccCCeEEeee
Q 045370 161 ITALA-FSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGV-VTNLVVIRQSSLLSEVS 217 (350)
Q Consensus 161 i~~~~-~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~~~~ 217 (350)
+.... ...++ ++.++.||.|+.||.++++.+.++...... -.-+.+..+|+.++...
T Consensus 466 ~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 466 AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 11111 12234 777899999999999999999988743221 22344667887555443
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.13 E-value=0.0002 Score=67.94 Aligned_cols=148 Identities=11% Similarity=-0.003 Sum_probs=83.1
Q ss_pred eec-CCCCEEEEEeC-CC----cEEEEeCccccccccccccccccccccEEEeecccccccee-eeccccCCceEEEEee
Q 045370 2 VFS-DDGFLLISGSD-DG----MICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-YSLEHKSSVTGLLTIS 74 (350)
Q Consensus 2 ~~s-~dg~~l~sg~~-dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~ 74 (350)
+|| |||++||.+.. +| .|+++|+.++. ..+. .+. ....++.|++
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~--------------------------~~l~~~~~---~~~~~~~Wsp 230 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS--------------------------QTIADKVS---GTNGEIVWGP 230 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTT--------------------------CCCCCCEE---EECSCCEECS
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCC--------------------------EeCCcccc---CceeeEEEec
Confidence 689 99998885543 23 59999998320 1110 010 1134567866
Q ss_pred CCCcEEEEEeCC-----CcEEEEeCCCCce--EEEEe--cCCceeEEEEcCCCcEEEEEcc---CCeEEEEeCCcccccc
Q 045370 75 GGTTFFVSSSLD-----ATCKVWDLGSGIL--IQTQV--YPQAVTAIAFHPGEQLLFAGSI---DGRIFVSPLKFLLLED 142 (350)
Q Consensus 75 ~~~~~l~s~~~d-----~~v~vwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~ 142 (350)
+++.|+....| ..|.++++.++.. ...+. .......+.|+|||++|+..+. ...|+++|+..+..
T Consensus 231 -Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-- 307 (751)
T 2xe4_A 231 -DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-- 307 (751)
T ss_dssp -STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--
T ss_pred -CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--
Confidence 55445444444 2588888887642 22222 2334667899999998876653 34688888875311
Q ss_pred cccccccc--ceeeeccCCceEEEEecCCe--EEEEeCC----CcEEEEECCC
Q 045370 143 HFIVGEDQ--HSVLKGHNGSITALAFSASH--LISASED----KTVCLWDVTR 187 (350)
Q Consensus 143 ~~~~~~~~--~~~~~~~~~~i~~~~~~~~~--l~s~~~d----g~v~iwd~~~ 187 (350)
.. .............+.|+..+ ++.+..+ ..|..+|+.+
T Consensus 308 ------~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 308 ------HNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ------CCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ------CceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 01 11122234455666655444 3444333 3677778765
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.11 E-value=0.0017 Score=55.49 Aligned_cols=149 Identities=11% Similarity=-0.073 Sum_probs=95.0
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCC-cEEEEEccCCeEEEEeCCcccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGE-QLLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~ 140 (350)
....+..++|.+.++.++++-...+.|..+++.......... .......+++++.+ +.+++-...+.|.+.++....
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~- 149 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 149 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-
Confidence 334578899987777777777778899999988765444333 22456789999754 455555667899999876321
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe---EEEEeCC-CcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASED-KTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
....+...-.....++++|.+ +++-... +.|..+++........+.........++++|++..|+.+
T Consensus 150 ---------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 150 ---------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp ---------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEE
T ss_pred ---------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEE
Confidence 111222233567899999854 4444444 788888887433222222233457899999988777766
Q ss_pred ecCcc
Q 045370 217 SNCQR 221 (350)
Q Consensus 217 ~~~~~ 221 (350)
.....
T Consensus 221 D~~~~ 225 (349)
T 3v64_C 221 DAKHH 225 (349)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 65433
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.11 E-value=0.0027 Score=53.31 Aligned_cols=147 Identities=12% Similarity=0.005 Sum_probs=90.5
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCC----CceEEEEe-cCCceeEEEEcCCCc-EEEEEccCCeEEEEeCC
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGS----GILIQTQV-YPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLK 136 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~----~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~ 136 (350)
....+.+++|.+.++.++++-..++.|..+++.. ......+. .-.....+++++.+. .+++-...+.|.++++.
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 3456788999876667777777788999999876 22222232 224568899987554 44555667899999876
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCe--EEEEeC-C-CcEEEEECCCceEEEEe-ccCCCceeEEEEEccCC
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASE-D-KTVCLWDVTRRVSIRRF-NHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~-d-g~v~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~~~ 211 (350)
.... ...+.........++++|.+ |+.+.. . +.|..+++.... ...+ .........++++|++.
T Consensus 108 g~~~----------~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 108 GVKR----------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSG 176 (316)
T ss_dssp SSSE----------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTT
T ss_pred CCce----------EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCC
Confidence 3211 11122233567899999854 444443 3 688888886432 2222 22345678999999887
Q ss_pred eEEeeecCc
Q 045370 212 LLSEVSNCQ 220 (350)
Q Consensus 212 ~l~~~~~~~ 220 (350)
.|+.+....
T Consensus 177 ~lY~~D~~~ 185 (316)
T 1ijq_A 177 RLYWVDSKL 185 (316)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 777666543
No 258
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.07 E-value=0.00017 Score=58.64 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=86.0
Q ss_pred ceEEEEeeCCCcEEEEEeC--CCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCccccccc
Q 045370 67 VTGLLTISGGTTFFVSSSL--DATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~ 143 (350)
...+.|.+ ++.++++.+. ++.|.+.|+.+++.+..+..........+..++..++.+ -.++.+.++|..+.+...
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~- 100 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK- 100 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE-
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE-
Confidence 57888865 4555555543 579999999999999987644433333333345555544 467999999998654432
Q ss_pred cccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCC--C---ceeEEEEEccCCeEEe
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKK--G---VVTNLVVIRQSSLLSE 215 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~---~v~~l~~~~~~~~l~~ 215 (350)
.+......-.. +++++ ++++..++.|.++|..+.+.+..+.... . .+..+.|. ++.+.+.
T Consensus 101 ---------~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 101 ---------NFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp ---------EEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred ---------EEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 22211011122 44455 6666678899999999999888876321 1 35678888 6654443
No 259
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.06 E-value=0.00023 Score=66.76 Aligned_cols=72 Identities=8% Similarity=-0.003 Sum_probs=50.1
Q ss_pred EEEEeeCCCcEEEEEeCCC-------------------cEEEEeCCCCceEEEEecC----------CceeEEEEcCCCc
Q 045370 69 GLLTISGGTTFFVSSSLDA-------------------TCKVWDLGSGILIQTQVYP----------QAVTAIAFHPGEQ 119 (350)
Q Consensus 69 ~~~~~~~~~~~l~s~~~d~-------------------~v~vwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~ 119 (350)
.+++.+ ...+++.+..++ .|..||..+|+.+..+... .++.......+|.
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 455655 455677777665 3999999999998876521 1122222233565
Q ss_pred ---EEEEEccCCeEEEEeCCccccc
Q 045370 120 ---LLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 120 ---~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
.++.++.+|.++++|..+++..
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEe
Confidence 7889999999999999988764
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.98 E-value=0.002 Score=53.88 Aligned_cols=132 Identities=13% Similarity=0.058 Sum_probs=77.8
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEEE-Ee----------cCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCc-ccccc
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQT-QV----------YPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKF-LLLED 142 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~----------~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~~~ 142 (350)
++..+++-..++.|.++|..++..... .. .-.....+ ++++..|+++ ...+.|..|++.. +....
T Consensus 127 ~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~ 204 (306)
T 2p4o_A 127 DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE 204 (306)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC
T ss_pred CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc
Confidence 444455554688888888876532111 10 01134455 7788766555 4568999999874 21110
Q ss_pred ccccccccceeeeccCCceEEEEecCCe-EEEE-eCCCcEEEEECCCceE--EEEeccCCCceeEEEEE---ccCCeEEe
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH-LISA-SEDKTVCLWDVTRRVS--IRRFNHKKGVVTNLVVI---RQSSLLSE 215 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~-~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~l~~~---~~~~~l~~ 215 (350)
...+. .......+++++++ ++++ ...+.|.++|.. ++. +..+.......++++|. |++..|+.
T Consensus 205 --------~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 205 --------PEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp --------CEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEE
T ss_pred --------cEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEE
Confidence 01111 11345668889988 5444 456889999976 555 32344333568999999 88877776
Q ss_pred eecC
Q 045370 216 VSNC 219 (350)
Q Consensus 216 ~~~~ 219 (350)
++..
T Consensus 275 t~~~ 278 (306)
T 2p4o_A 275 VTNG 278 (306)
T ss_dssp EECT
T ss_pred ECCC
Confidence 6554
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.98 E-value=0.0014 Score=52.30 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=90.0
Q ss_pred cccC--CceEEEEeeCCCcEEEEEeCCC--cEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCC
Q 045370 62 EHKS--SVTGLLTISGGTTFFVSSSLDA--TCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLK 136 (350)
Q Consensus 62 ~h~~--~v~~~~~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~ 136 (350)
.|.. ....+.|.. +.++.+.+.+| .|+.+|+.+++.+.....+.........+.++.|+.. -.++.+.+||..
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 4543 355788753 56677777654 8999999999999988766665544444445555544 468999999998
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEeccC--C---CceeEEEEEccCC
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNHK--K---GVVTNLVVIRQSS 211 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~---~~v~~l~~~~~~~ 211 (350)
+.+... .+.... .-..++.....|+.+..++.|.++|..+.+.+.++... . ..+..+.|. +|+
T Consensus 94 tl~~~~----------ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 94 TLTPRA----------RFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp TTEEEE----------EEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred cCcEEE----------EEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 765443 222211 12344443333666667889999999999988887632 1 234556655 555
Q ss_pred eEE
Q 045370 212 LLS 214 (350)
Q Consensus 212 ~l~ 214 (350)
+.+
T Consensus 162 lya 164 (243)
T 3mbr_X 162 LLA 164 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.97 E-value=0.0033 Score=52.86 Aligned_cols=133 Identities=11% Similarity=0.005 Sum_probs=81.4
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEc--cCCeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGS--IDGRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~ 141 (350)
....++++.+.++.++++-...+.|.++++......... ..-.....++++|.+..|+.+. ..+.|..+++....
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 156 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-- 156 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS--
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC--
Confidence 456678886666777777777789999998754433333 2335678999999766665554 25788888765211
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--E-EEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEE
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--L-ISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~ 207 (350)
........-...+.++++|++ | ++-+..+.|..+|+........+.........+++.
T Consensus 157 --------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 157 --------RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp --------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE
T ss_pred --------eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe
Confidence 111111223457899999854 4 444567889999987432221222233455677775
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.97 E-value=0.00058 Score=55.01 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=90.9
Q ss_pred cccCC--ceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEE-EccCCeEEEEeCCcc
Q 045370 62 EHKSS--VTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFA-GSIDGRIFVSPLKFL 138 (350)
Q Consensus 62 ~h~~~--v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~ 138 (350)
.|... ...+.|. ++.++.+.+.+|.|+++|+.+++.+..+ ...........++++.|+. .-.++.+.+||..+.
T Consensus 50 phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 50 PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT
T ss_pred cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC
Confidence 45433 3677774 4678888889999999999999998887 6555544333334554444 446799999999876
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEecc--CCC---ceeEEEEEccCCeE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASHLISASEDKTVCLWDVTRRVSIRRFNH--KKG---VVTNLVVIRQSSLL 213 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~---~v~~l~~~~~~~~l 213 (350)
+... .+... ..-..+++....|+.+..++.|+++|..+.+.+.++.. +.. .+..+.|. +|++.
T Consensus 127 ~~~~----------ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 127 QRER----------TTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EEEE----------EEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred cEEE----------EEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 5443 22221 11234444433366666788999999999999888753 222 34567776 66655
Q ss_pred E
Q 045370 214 S 214 (350)
Q Consensus 214 ~ 214 (350)
+
T Consensus 195 a 195 (268)
T 3nok_A 195 A 195 (268)
T ss_dssp E
T ss_pred E
Confidence 4
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.97 E-value=0.0046 Score=53.84 Aligned_cols=149 Identities=11% Similarity=0.001 Sum_probs=93.9
Q ss_pred cccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCC----ceEEEEe-cCCceeEEEEcCC-CcEEEEEccCCeEEEEeC
Q 045370 62 EHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG----ILIQTQV-YPQAVTAIAFHPG-EQLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~----~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~ 135 (350)
.....+..++|.+.++.++++-...+.|..+++... ....... .......+++++. ++++++-...+.|.+.++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 445678899998767777777667788999998752 2222232 3346788999984 555555566789999887
Q ss_pred CccccccccccccccceeeeccCCceEEEEecCCe--EEEEe--CCCcEEEEECCCceEEEEeccCCCceeEEEEEccCC
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISAS--EDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
.... ....+.........|+++|.+ |+.+. ..+.|...++........+.........|+++|++.
T Consensus 189 ~g~~----------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 189 KGVK----------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 258 (400)
T ss_dssp TTCS----------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred CCCc----------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCC
Confidence 6321 111222233457899999854 44443 247899888875433222333335678999999888
Q ss_pred eEEeeecCc
Q 045370 212 LLSEVSNCQ 220 (350)
Q Consensus 212 ~l~~~~~~~ 220 (350)
.|+.+....
T Consensus 259 ~lY~aD~~~ 267 (400)
T 3p5b_L 259 RLYWVDSKL 267 (400)
T ss_dssp EEEEEETTT
T ss_pred EEEEEECCC
Confidence 777666543
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.96 E-value=0.006 Score=53.11 Aligned_cols=134 Identities=14% Similarity=0.023 Sum_probs=83.1
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEc-c-CCeEEEEeCCccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGS-I-DGRIFVSPLKFLL 139 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~-dg~i~i~d~~~~~ 139 (350)
.......+++...++.++++-...+.|.+.++........+. .-.....++++|.+..|+... . .+.|...++...
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~- 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-
Confidence 345667888876567777777778899999988665444443 334578999999766665554 2 367888877621
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe--EEEE-eCCCcEEEEECCCceEEEEec--cCCCceeEEEE
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISA-SEDKTVCLWDVTRRVSIRRFN--HKKGVVTNLVV 206 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~-~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~l~~ 206 (350)
.........-...+.|++++++ |+.+ ...+.|..+|+........+. .......++++
T Consensus 236 ---------~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 236 ---------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp ---------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE
T ss_pred ---------ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE
Confidence 1111222233567899999765 4444 456789999987533222222 12234456666
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.94 E-value=0.00096 Score=62.30 Aligned_cols=129 Identities=11% Similarity=0.209 Sum_probs=80.3
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCC-------------ce------------------------eEEEEcCCCcEE
Q 045370 79 FFVSSSLDATCKVWDLGSGILIQTQVYPQ-------------AV------------------------TAIAFHPGEQLL 121 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-------------~v------------------------~~~~~~~~~~~l 121 (350)
.++.++.+|.+.++|..+|+.+....... ++ ..++++|+...+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 68899999999999999999885433211 00 126777776666
Q ss_pred EEEc------------------------------------cCCeEEEEeCCccccccccccccccceeeeccCCceE--E
Q 045370 122 FAGS------------------------------------IDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSIT--A 163 (350)
Q Consensus 122 ~~~~------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~ 163 (350)
++.. .+|.|..||+.+++..... ..+ .+.. .
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~----------~~~-~~~~~~~ 464 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKV----------PYP-THWNGGT 464 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEE----------EES-SSCCCCE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEc----------cCC-CCCcCce
Confidence 5421 2377888888766543221 111 1111 1
Q ss_pred EEecCCeEEEEeCCCcEEEEECCCceEEEEeccCCCc-eeEEEEEccCC-eEEeeec
Q 045370 164 LAFSASHLISASEDKTVCLWDVTRRVSIRRFNHKKGV-VTNLVVIRQSS-LLSEVSN 218 (350)
Q Consensus 164 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~l~~~~~~~-~l~~~~~ 218 (350)
+....+.++.++.|+.|+.||.++++.+..+....+. -.-+.+..+|+ +++.++.
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEec
Confidence 2222222888899999999999999999988744321 13345566776 5554443
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.93 E-value=0.0019 Score=59.24 Aligned_cols=48 Identities=8% Similarity=0.077 Sum_probs=34.5
Q ss_pred EEEEeCCCcEEEEECCCceEEEEeccCCC-ceeEEEEEccCC-eEEeeec
Q 045370 171 LISASEDKTVCLWDVTRRVSIRRFNHKKG-VVTNLVVIRQSS-LLSEVSN 218 (350)
Q Consensus 171 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~~-~l~~~~~ 218 (350)
++.++.||.|+.||.++|+.+.++....+ ...-+.+..+|+ ++++.+.
T Consensus 487 vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 487 VFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 77789999999999999999998864332 223356777886 4544443
No 268
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.91 E-value=0.0041 Score=59.40 Aligned_cols=145 Identities=10% Similarity=0.044 Sum_probs=98.0
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe---------cCCceeEEEEcCCCcEEEEEccCCeEEEEe
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV---------YPQAVTAIAFHPGEQLLFAGSIDGRIFVSP 134 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 134 (350)
...|.++...+ ++. +..|+.++-|..||..++....... ....|.++..+++++.|++|+.++-|..||
T Consensus 356 ~~~V~~i~~d~-~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDK-DKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECT-TSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECC-CCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 45688887654 444 6668888789999998876554321 135688999988888677788777899999
Q ss_pred CCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc------CCCceeEEEEE
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH------KKGVVTNLVVI 207 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~l~~~ 207 (350)
..++......... -..+...|.++...+++ |..|+. +-|.+||..+++....... ....|.++...
T Consensus 434 ~~~~~~~~~~~~~------~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 434 RNSGQVENFNQRN------SQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp TTTCCEEEECTTT------SCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC
T ss_pred CCCCcEEEeecCC------CCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEEC
Confidence 8764432110000 00234579999998888 777777 4589999988765432211 23568899999
Q ss_pred ccCCeEEeee
Q 045370 208 RQSSLLSEVS 217 (350)
Q Consensus 208 ~~~~~l~~~~ 217 (350)
++|.+.+++.
T Consensus 507 ~~g~lWigt~ 516 (795)
T 4a2l_A 507 SHKRLWIGGE 516 (795)
T ss_dssp TTCCEEEEES
T ss_pred CCCCEEEEeC
Confidence 9998877554
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.00075 Score=59.43 Aligned_cols=143 Identities=8% Similarity=0.008 Sum_probs=88.5
Q ss_pred CceEEEEee-CCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC-C----eEEEEeCCccc
Q 045370 66 SVTGLLTIS-GGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID-G----RIFVSPLKFLL 139 (350)
Q Consensus 66 ~v~~~~~~~-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~i~d~~~~~ 139 (350)
....+++.| .++. |+.+...+.|+.+|+..+..............++|++++++|+++... + .+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 457888865 2444 444444488999999887766555555668899999999977666542 2 23333322 21
Q ss_pred cccccccccccceeeeccCCceEEEEecC-Ce-EE-EEeCCCcEEEEECCCceEEEEec-cCCCceeEEEEEccCCeEEe
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSA-SH-LI-SASEDKTVCLWDVTRRVSIRRFN-HKKGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-l~-s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~~ 215 (350)
... ...+. .......++++| ++ |+ +-..++.|..+|..++....... ........++|+|++++|+.
T Consensus 216 ~~~--------~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 216 FKV--------ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp SCS--------EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred eee--------eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 110 01111 123456788999 66 44 44467899999998776522222 12234678999999996665
Q ss_pred eecC
Q 045370 216 VSNC 219 (350)
Q Consensus 216 ~~~~ 219 (350)
+...
T Consensus 287 ~d~~ 290 (430)
T 3tc9_A 287 VVVN 290 (430)
T ss_dssp EETT
T ss_pred EECC
Confidence 5544
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.87 E-value=0.0045 Score=52.01 Aligned_cols=134 Identities=9% Similarity=-0.048 Sum_probs=81.9
Q ss_pred ccCCceEEEEeeCCCcEEEEEe-CCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSS-LDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKFLL 139 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~ 139 (350)
.......+++.+.++.++++-. ..+.|...++.......... .-.....+++++++..|+.+ +..+.|..+|+....
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 3455678888776665555542 35778888876433222222 22456899999976666555 456889999886311
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEE
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVV 206 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~ 206 (350)
......+.......+++..++ +++-...+.|..+|..+++....+........+++.
T Consensus 200 ----------~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 200 ----------RQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp ----------CEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred ----------eEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence 111112233456777877777 666667788999999887766665533333445544
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.82 E-value=0.0021 Score=53.53 Aligned_cols=166 Identities=7% Similarity=-0.046 Sum_probs=103.0
Q ss_pred ccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE-Eec-------CCceeEEEE---cCCCcEEEEEc----
Q 045370 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVY-------PQAVTAIAF---HPGEQLLFAGS---- 125 (350)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~l~~~~---- 125 (350)
.......-++.|...++.++++.-..++|..||...+..... +.. ...+..+.| +|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 344455667789876777777776899999999986654443 221 013578999 68877777544
Q ss_pred ---------cCCeEEEEeCC---ccccccccccccc--cceeeec-cCCceEEEEecCCe--EEEEeCC-CcEEEEECCC
Q 045370 126 ---------IDGRIFVSPLK---FLLLEDHFIVGED--QHSVLKG-HNGSITALAFSASH--LISASED-KTVCLWDVTR 187 (350)
Q Consensus 126 ---------~dg~i~i~d~~---~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~~~~~~~--l~s~~~d-g~v~iwd~~~ 187 (350)
.+..|..||+. +++.......... ......+ -......++..++| .++++.. +.|...+...
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 26789999988 5443221111000 0000001 11358899999998 7778877 8887777764
Q ss_pred ceEEEEe-cc----CCCceeEEEEEccCCeEEeeecCccccccc
Q 045370 188 RVSIRRF-NH----KKGVVTNLVVIRQSSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 188 ~~~~~~~-~~----~~~~v~~l~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
.....-+ .. .....+.++++|+|..|++....++++.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 4222111 11 122367999999999888777766655543
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.81 E-value=0.0036 Score=57.45 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=69.4
Q ss_pred CCCcEEEEeCCCCceEEEEecCCce---------------------------------------eEEEEcCCCcEEEEEc
Q 045370 85 LDATCKVWDLGSGILIQTQVYPQAV---------------------------------------TAIAFHPGEQLLFAGS 125 (350)
Q Consensus 85 ~d~~v~vwd~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~ 125 (350)
.++.|.-+|..+|+.+..+....+. ..+++++....++.++
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3899999999999998876543221 1356777778888877
Q ss_pred cCC----------------eEEEEeCCccccccccccccccceeeeccCCceEEEEec-CCe-----EEEEeCCCcEEEE
Q 045370 126 IDG----------------RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS-ASH-----LISASEDKTVCLW 183 (350)
Q Consensus 126 ~dg----------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-----l~s~~~dg~v~iw 183 (350)
.++ .|..+|..+++....+.......-.+.....++. +... .++ ++.++.+|.++++
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEE
Confidence 653 7889999877655332211110001111112222 2221 222 6678899999999
Q ss_pred ECCCceEEEEec
Q 045370 184 DVTRRVSIRRFN 195 (350)
Q Consensus 184 d~~~~~~~~~~~ 195 (350)
|..+|+.+....
T Consensus 339 D~~tG~~lw~~~ 350 (599)
T 1w6s_A 339 DRTDGALVSANK 350 (599)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCCEeeccc
Confidence 999999987764
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.79 E-value=0.0048 Score=49.78 Aligned_cols=161 Identities=16% Similarity=0.115 Sum_probs=102.7
Q ss_pred eeccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecC--CceeEEEEcCCCcEEEEEccCCeEEEEeCC
Q 045370 59 YSLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYP--QAVTAIAFHPGEQLLFAGSIDGRIFVSPLK 136 (350)
Q Consensus 59 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 136 (350)
.+.+-...+..++|.+.++.++++...++.|...|.. ++.+..+... .....|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3445557899999988666777778888999999998 8888877543 468899999888877776677889999876
Q ss_pred cccccccccccccccee-eeccCCceEEEEecCCe--EEEEeCCCcEEEEECCC---c---eEEEE--e--ccCCCceeE
Q 045370 137 FLLLEDHFIVGEDQHSV-LKGHNGSITALAFSASH--LISASEDKTVCLWDVTR---R---VSIRR--F--NHKKGVVTN 203 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~---~---~~~~~--~--~~~~~~v~~ 203 (350)
....... ........ ........-.++|+|.+ |+++.+.....||.+.. . +.+.. + ..+...+.+
T Consensus 100 ~~~~i~~--~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 100 PNSEVKI--LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp TTCCEEE--EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCeeee--eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 5332100 00000000 11234557899999987 77777655555555431 1 22111 0 113346789
Q ss_pred EEEEccCCeEEeeecCccc
Q 045370 204 LVVIRQSSLLSEVSNCQRK 222 (350)
Q Consensus 204 l~~~~~~~~l~~~~~~~~~ 222 (350)
++++|....+...+...+.
T Consensus 178 l~~dp~tg~lliLS~~s~~ 196 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRA 196 (255)
T ss_dssp EEEETTTTEEEEEETTTTE
T ss_pred EEEcCCCCeEEEEECCCCe
Confidence 9999987655556655433
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.78 E-value=0.0093 Score=56.53 Aligned_cols=145 Identities=13% Similarity=0.001 Sum_probs=87.1
Q ss_pred ccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEc-cC-CeEEEEeCCccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGS-ID-GRIFVSPLKFLL 139 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~ 139 (350)
.......|++...++.++++-...+.|.+.++........+. .-.....|+++|.+.+|+.+. .+ +.|...++...
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~- 547 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 547 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-
Confidence 345667888876666777777788899999998655444333 334688999999766555554 33 67888877621
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe--EEEE-eCCCcEEEEECCCceEEEEecc--CCCceeEEEEEccCCeEE
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISA-SEDKTVCLWDVTRRVSIRRFNH--KKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~-~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~ 214 (350)
.....+...-...+.|++++.. |+.+ ...+.|..+|+........+.. ......+|++. +..|+
T Consensus 548 ---------~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lY 616 (791)
T 3m0c_C 548 ---------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVF 616 (791)
T ss_dssp ---------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEE
T ss_pred ---------ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEE
Confidence 1111222233578889998654 4444 4567899999865433222222 12234455553 33455
Q ss_pred eeecC
Q 045370 215 EVSNC 219 (350)
Q Consensus 215 ~~~~~ 219 (350)
.+...
T Consensus 617 wtD~~ 621 (791)
T 3m0c_C 617 WTDII 621 (791)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 44433
No 275
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.76 E-value=0.0083 Score=57.29 Aligned_cols=146 Identities=8% Similarity=0.046 Sum_probs=94.3
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe--------cCCceeEEEEcCCCcEEEEEccCCeEEEEeC
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV--------YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 135 (350)
...|.++...+ ++. +..|+.+ -|.+||..++....... ....|.++..+++|. |..|+.++-|..|+.
T Consensus 262 ~~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 262 SNYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHP 337 (795)
T ss_dssp CSBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECG
T ss_pred CCeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCC
Confidence 35688887654 444 4455555 58999988776544321 124699999988776 556777777888887
Q ss_pred CccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc--------CCCceeEEEE
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH--------KKGVVTNLVV 206 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~v~~l~~ 206 (350)
............. .-.-....|.++...+++ |..|+.++-|..||..+++...-... ....|.+++.
T Consensus 338 ~~~~~~~~~~~~~----~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 338 IRNRFKNIRNIPY----KNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp GGGSSEEECCCTT----SSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred CcccceEEcCCCC----CCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 6433211000000 001124569999999988 88899888899999987765433211 2357899999
Q ss_pred EccCC-eEEeeec
Q 045370 207 IRQSS-LLSEVSN 218 (350)
Q Consensus 207 ~~~~~-~l~~~~~ 218 (350)
.+++. +.+ |+.
T Consensus 414 d~~g~~lWi-gt~ 425 (795)
T 4a2l_A 414 DEKKSLVYI-GTH 425 (795)
T ss_dssp ETTTTEEEE-EET
T ss_pred cCCCCEEEE-EeC
Confidence 99998 555 544
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.72 E-value=0.007 Score=53.24 Aligned_cols=151 Identities=10% Similarity=0.028 Sum_probs=84.9
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE-Eec--CCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCc--c
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVY--PQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKF--L 138 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~--~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~--~ 138 (350)
.....+++.+.++.++++-..++.|..+|..++..... ... ......++|+|++++|+.+ ...+.|+.++... .
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 44556677665677666666778899999987776332 222 2223469999999965555 4568899987652 2
Q ss_pred ccccccccccc---cce----eeeccCCceEEEEe---------cCCe-EEEE-eCCCcEEEEECCCceEEEEeccC---
Q 045370 139 LLEDHFIVGED---QHS----VLKGHNGSITALAF---------SASH-LISA-SEDKTVCLWDVTRRVSIRRFNHK--- 197 (350)
Q Consensus 139 ~~~~~~~~~~~---~~~----~~~~~~~~i~~~~~---------~~~~-l~s~-~~dg~v~iwd~~~~~~~~~~~~~--- 197 (350)
........... .-. .....-.....+++ .+++ |+.+ ...+.|+.++. ++... ++.+.
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~ 385 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNS 385 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTT
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCC
Confidence 11100000000 000 00011234677888 6777 4444 45678999985 45433 33211
Q ss_pred ---------------CCceeEEEEE-ccCCeEEeeec
Q 045370 198 ---------------KGVVTNLVVI-RQSSLLSEVSN 218 (350)
Q Consensus 198 ---------------~~~v~~l~~~-~~~~~l~~~~~ 218 (350)
-.....|+++ +++.+++ +..
T Consensus 386 ~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyV-aD~ 421 (433)
T 4hw6_A 386 REWGYVDGELRSQALFNHPTSIAYDMKRKCFYI-GDC 421 (433)
T ss_dssp CSSCCBCEETTTTCBCSSEEEEEEETTTTEEEE-EEG
T ss_pred CccccCCCccccccEeCCCcEEEEECCCCEEEE-EeC
Confidence 1236789999 5565555 443
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.72 E-value=0.0041 Score=56.89 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=66.8
Q ss_pred CCcEEEEeCCCCceEEEEecCCce---------------------------------------eEEEEcCCCcEEEEEcc
Q 045370 86 DATCKVWDLGSGILIQTQVYPQAV---------------------------------------TAIAFHPGEQLLFAGSI 126 (350)
Q Consensus 86 d~~v~vwd~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l~~~~~ 126 (350)
++.|..+|..+|+.+..+....+. ..+++++....++.++.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 799999999999998876543221 23567777677777664
Q ss_pred C----------------CeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-----EEEEeCCCcEEEEEC
Q 045370 127 D----------------GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-----LISASEDKTVCLWDV 185 (350)
Q Consensus 127 d----------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----l~s~~~dg~v~iwd~ 185 (350)
+ +.|..+|..+++..............+.....++. +...+++ ++.++.+|.++++|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 35889999877654322111000000001112222 2222233 667888999999999
Q ss_pred CCceEEEEec
Q 045370 186 TRRVSIRRFN 195 (350)
Q Consensus 186 ~~~~~~~~~~ 195 (350)
.+++.+..+.
T Consensus 334 ~tG~~~w~~~ 343 (571)
T 2ad6_A 334 ENGNLIVAEK 343 (571)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEeeec
Confidence 9999887764
No 278
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.71 E-value=0.017 Score=48.67 Aligned_cols=188 Identities=13% Similarity=0.140 Sum_probs=112.7
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC---CCc---E
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG---GTT---F 79 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~---~ 79 (350)
...+++.....+-+.+||+. +..+..+.. +.++.+..-+. ++. +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~----------------------------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dl 88 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD----------------------------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDI 88 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT----------------------------SCEEEEECC--SCEEEEEEEEEEEETTEEEEE
T ss_pred CccEEEEEcCCCCEEEEcCC----------------------------CcEEEEccC--CCcccEEEecccccCCceEeE
Confidence 34566666778889999997 444444432 44555554431 111 2
Q ss_pred -EEEEeC--CCcEEEEeC--CCCceEEEEe-------cC-CceeEEEE--cCC-Cc-EEEEEccCCeEEEEeCCcccccc
Q 045370 80 -FVSSSL--DATCKVWDL--GSGILIQTQV-------YP-QAVTAIAF--HPG-EQ-LLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 80 -l~s~~~--d~~v~vwd~--~~~~~~~~~~-------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
+++.-. +++|.+|++ .++. +..+. .. ..+..+|+ +|. +. ++++...+|.+..|++....-.
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g- 166 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG- 166 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS-
T ss_pred EEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC-
Confidence 333333 578999976 3443 33331 11 55777888 664 43 6888888999999998531100
Q ss_pred ccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECC-----CceEEEEec-cC-CCceeEEEE--EccCC
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVT-----RRVSIRRFN-HK-KGVVTNLVV--IRQSS 211 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~-----~~~~~~~~~-~~-~~~v~~l~~--~~~~~ 211 (350)
....+.++.+... +.+-.+...+.. |+.+-++..|..+|.+ +++.+..+. ++ ...+..|++ .++++
T Consensus 167 --~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 167 --YISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp --CEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC
T ss_pred --cccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC
Confidence 0123344455443 467777777754 9999998777777755 456666653 22 236788887 45666
Q ss_pred -eEEeeecCccccccccC
Q 045370 212 -LLSEVSNCQRKLKKDRM 228 (350)
Q Consensus 212 -~l~~~~~~~~~~~~~~~ 228 (350)
+|++++.....+.+++.
T Consensus 244 gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 244 GYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEEEGGGTEEEEEES
T ss_pred EEEEEEcCCCCEEEEEEC
Confidence 77767755544444433
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.67 E-value=0.019 Score=54.38 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=92.7
Q ss_pred cccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCC----ceEEEEe-cCCceeEEEEcCCCcEE-EEEccCCeEEEEeC
Q 045370 62 EHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG----ILIQTQV-YPQAVTAIAFHPGEQLL-FAGSIDGRIFVSPL 135 (350)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~ 135 (350)
.....+..++|.+.++.++++-...+.|..+++... .....+. .-.....|++++.+..| ++-...+.|.+.++
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 345667788887766777777777788999998753 2222232 33457789999877544 45556789999988
Q ss_pred CccccccccccccccceeeeccCCceEEEEecCCe--EEEEe-C-CCcEEEEECCCceEEEEeccCCCceeEEEEEccCC
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISAS-E-DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~-~-dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
.... ....+.........|+++|.. |+.+. . .+.|...++........+.........|++++.+.
T Consensus 501 dG~~----------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 501 KGVK----------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 570 (791)
T ss_dssp TSSS----------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTT
T ss_pred CCCe----------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCC
Confidence 7321 111222333567899999864 54444 2 36788888875444333333345678899998777
Q ss_pred eEEeeecC
Q 045370 212 LLSEVSNC 219 (350)
Q Consensus 212 ~l~~~~~~ 219 (350)
.|+.+...
T Consensus 571 ~LYwaD~~ 578 (791)
T 3m0c_C 571 RLYWVDSK 578 (791)
T ss_dssp EEEEEETT
T ss_pred eEEEEeCC
Confidence 76666543
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.67 E-value=0.0043 Score=51.72 Aligned_cols=154 Identities=12% Similarity=0.135 Sum_probs=95.8
Q ss_pred eecCCCCEEEEEe-CCCcEEEEeCccccccccccccccccccccEEEeecccccccee-eecc----c--cCCceEEEE-
Q 045370 2 VFSDDGFLLISGS-DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH-YSLE----H--KSSVTGLLT- 72 (350)
Q Consensus 2 ~~s~dg~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----h--~~~v~~~~~- 72 (350)
+|++....|..++ ..++|..||... ..... .+.+ . ...+.++.|
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~---------------------------~~~~~~~~~~~s~~g~~~~~~sGl~~~ 71 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKT---------------------------QSHFNVVIDGASSNGDGEQQMSGLSLL 71 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTT---------------------------CCEEEECCTTTCCSSCCSEEEEEEEES
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCC---------------------------CeEEEEecCCccccCCCcceeeEEEEe
Confidence 5777555555555 799999999862 11111 1111 0 112467777
Q ss_pred --eeCCCcEEEEEe-------------CCCcEEEEeCC---CCceEEEEecC--------------CceeEEEEcCCCcE
Q 045370 73 --ISGGTTFFVSSS-------------LDATCKVWDLG---SGILIQTQVYP--------------QAVTAIAFHPGEQL 120 (350)
Q Consensus 73 --~~~~~~~l~s~~-------------~d~~v~vwd~~---~~~~~~~~~~~--------------~~v~~~~~~~~~~~ 120 (350)
.+ ++.++++.. .+..|..+|+. +++.+...... ..+..++.+++|+.
T Consensus 72 ~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 72 THDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp SSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred ccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 35 456666433 26779999999 78776664421 24889999999999
Q ss_pred EEEEccC-CeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCc
Q 045370 121 LFAGSID-GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRR 188 (350)
Q Consensus 121 l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~ 188 (350)
.++++.. +.|..++........ +.... .........+.|+++|++ |++....|.|.-+|+.+.
T Consensus 151 YVt~s~~~~~I~rV~pdG~~~~~-~~~~~----~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 151 YVAFALGMPAIARVSADGKTVST-FAWES----GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEESSCEEEEECTTSCCEEE-EEECC----CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EEeCCCCCCeEEEEeCCCCEEee-eeecC----CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 9998888 888777765321110 00000 001122346789999998 666655999999998853
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.61 E-value=0.002 Score=56.70 Aligned_cols=147 Identities=11% Similarity=0.078 Sum_probs=84.6
Q ss_pred CeecC-CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCc-
Q 045370 1 MVFSD-DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTT- 78 (350)
Q Consensus 1 i~~s~-dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~- 78 (350)
|+|+| ++..|+.+...+.|+.+|.. ...+..+.........+++.+ ++.
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~----------------------------~~~v~~~~~~~~~P~~ia~d~-~G~~ 192 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFE----------------------------KEYVSTVYSGLSKVRTICWTH-EADS 192 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETT----------------------------TTEEEEEECCCSCEEEEEECT-TSSE
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECC----------------------------CCEEEEEecCCCCcceEEEeC-CCCE
Confidence 46776 34455555554778888776 222222233445678888866 555
Q ss_pred EEEEEeCCC----cEEEEeCCCCceE--EEEecCCceeEEEEcC-CCcEEEEEccCCeEEEEeCCccccccccccccccc
Q 045370 79 FFVSSSLDA----TCKVWDLGSGILI--QTQVYPQAVTAIAFHP-GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 79 ~l~s~~~d~----~v~vwd~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
++++...++ .+...+. .+... ..+........++++| ++.++++-..++.|..++........ +
T Consensus 193 lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~--------~ 263 (430)
T 3tc9_A 193 MIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP--------L 263 (430)
T ss_dssp EEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE--------E
T ss_pred EEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE--------E
Confidence 444443222 2333343 33222 2333344567889999 66666666677899999987432210 0
Q ss_pred eeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECC
Q 045370 152 SVLKGHNGSITALAFSASH---LISASEDKTVCLWDVT 186 (350)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~ 186 (350)
... ........++++|++ +++-...+.|..++..
T Consensus 264 ~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 264 FTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEc-CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 011 112456789999998 4444567889998765
No 282
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.60 E-value=0.0039 Score=58.24 Aligned_cols=108 Identities=19% Similarity=0.200 Sum_probs=69.0
Q ss_pred CCcEEEEeCCCCceEEEEecC--Cc------------------------------eeEEEEcCCCcEEEEEccCCe----
Q 045370 86 DATCKVWDLGSGILIQTQVYP--QA------------------------------VTAIAFHPGEQLLFAGSIDGR---- 129 (350)
Q Consensus 86 d~~v~vwd~~~~~~~~~~~~~--~~------------------------------v~~~~~~~~~~~l~~~~~dg~---- 129 (350)
+|.|..+|..+|+.+..+... .+ ...++++|....++.++.++.
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999998876421 00 124688888888888887763
Q ss_pred ---------------EEEEeCCccccccccccccccceeeeccCCceE--EEEecCC---eEEEEeCCCcEEEEECCCce
Q 045370 130 ---------------IFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSIT--ALAFSAS---HLISASEDKTVCLWDVTRRV 189 (350)
Q Consensus 130 ---------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~---~l~s~~~dg~v~iwd~~~~~ 189 (350)
|..+|..+++..............+. ...+.. .+.+... .++.++.+|.++++|..+|+
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~-~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT-ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC-CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc-CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 89999988765543221100000000 012222 2333322 18888999999999999999
Q ss_pred EEEEe
Q 045370 190 SIRRF 194 (350)
Q Consensus 190 ~~~~~ 194 (350)
.+...
T Consensus 336 ~l~~~ 340 (668)
T 1kv9_A 336 LISAE 340 (668)
T ss_dssp EEEEE
T ss_pred Eeccc
Confidence 88544
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.58 E-value=0.00065 Score=63.72 Aligned_cols=112 Identities=13% Similarity=0.008 Sum_probs=68.0
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEcc-C-CeEEEEeCCcccccc
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGSI-D-GRIFVSPLKFLLLED 142 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~ 142 (350)
....+++...++.++++-...+.|.++++........+. .......++++|.+.+|+.+.. . +.|..+++....
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~--- 530 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--- 530 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---
Confidence 345566655556666666667889999987654443333 2245678899997665555442 2 677777765211
Q ss_pred ccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCC
Q 045370 143 HFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTR 187 (350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~ 187 (350)
....+...-...+.|+++|++ +++-+..+.|..+|+..
T Consensus 531 -------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 531 -------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp -------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred -------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 000111222456789999865 44445667899999864
No 284
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.56 E-value=0.028 Score=51.93 Aligned_cols=132 Identities=11% Similarity=0.027 Sum_probs=82.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEc--cCCeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGS--IDGRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~ 141 (350)
.....+++...+++++++-...+.|.+.++......... ..-.....++++|....|+... ..+.|...++....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-- 157 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-- 157 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--
Confidence 456788887666777777777788999998755433333 2334578999999655555554 24677777765221
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--EE-EEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEc
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--LI-SASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIR 208 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 208 (350)
...+...-...+.|++++++ |+ +-...+.|..+|+..... ..+........++++..
T Consensus 158 ---------~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 158 ---------RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp ---------CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET
T ss_pred ---------eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC
Confidence 11222234577899999864 44 444567899999875332 22322333455777754
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.56 E-value=0.0037 Score=58.32 Aligned_cols=102 Identities=7% Similarity=-0.018 Sum_probs=54.3
Q ss_pred eEEEEcC-CCcEEEEEccCC-----------eEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe--EEEEe
Q 045370 110 TAIAFHP-GEQLLFAGSIDG-----------RIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH--LISAS 175 (350)
Q Consensus 110 ~~~~~~~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~ 175 (350)
.++.|.. +++.++.|+.++ .+.+||..+....... .. .+.. ...-.++...|++ ++.|+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~---~mp~-~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA---SN---GLYF-ARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC---TT---CCSS-CCBSCEEEECTTSCEEEECC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc---cC---CCCC-CcccCCeEECCCCCEEEECC
Confidence 3444443 677777777532 5777776643321100 00 1111 1112234555666 77776
Q ss_pred CC-----------CcEEEEECCCceEEE--EeccCCCceeEEEEEccCCeEEeeec
Q 045370 176 ED-----------KTVCLWDVTRRVSIR--RFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 176 ~d-----------g~v~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.+ ..+.+||..+.+-.. .+...........+.|++++++.|+.
T Consensus 475 ~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 475 QRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp BSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 54 468999998765322 22222222334556799999998875
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.0058 Score=56.97 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=47.9
Q ss_pred eEEEEeeCCCcEEEEEeC-CCcEEEEeCCCCceEEE--EecCCceeEEEEcCCCcEEEEEc-cC-----CeEEEEeCCcc
Q 045370 68 TGLLTISGGTTFFVSSSL-DATCKVWDLGSGILIQT--QVYPQAVTAIAFHPGEQLLFAGS-ID-----GRIFVSPLKFL 138 (350)
Q Consensus 68 ~~~~~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~ 138 (350)
.++++. .++.+++.|+. +..+.+||..+++.... +.....-.++++.++++.++.|+ .+ ..+.+||..+.
T Consensus 246 ~~~~~~-~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 246 PGISMD-GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp CEEEEC-TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ccccCC-CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 344443 36788888884 45899999988765443 22233334566777899888888 34 57899998765
Q ss_pred c
Q 045370 139 L 139 (350)
Q Consensus 139 ~ 139 (350)
.
T Consensus 325 ~ 325 (656)
T 1k3i_A 325 T 325 (656)
T ss_dssp E
T ss_pred c
Confidence 4
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.54 E-value=0.023 Score=48.27 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=85.5
Q ss_pred cCCceEEEEeeC-CC--cEEEEEeC--CCcEEEEeCCCC--ceEE--EEec--CCceeEEEEcCCCcEEEEEcc------
Q 045370 64 KSSVTGLLTISG-GT--TFFVSSSL--DATCKVWDLGSG--ILIQ--TQVY--PQAVTAIAFHPGEQLLFAGSI------ 126 (350)
Q Consensus 64 ~~~v~~~~~~~~-~~--~~l~s~~~--d~~v~vwd~~~~--~~~~--~~~~--~~~v~~~~~~~~~~~l~~~~~------ 126 (350)
......+.+... ++ .++++-.. +.+|.+|++..+ .... .+.+ -...+.+.+.++|.+.++...
T Consensus 111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence 345666666552 22 23444333 467888877653 2222 2222 235789999999987776541
Q ss_pred -----------CCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCC-ceE-
Q 045370 127 -----------DGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTR-RVS- 190 (350)
Q Consensus 127 -----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~-~~~- 190 (350)
.|.|+.+|.. ....+...-...+.++|+|++ +++-+..+.|+.||+.. +..
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~-------------~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~ 257 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPN-------------DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLT 257 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTT-------------CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cccchhhccCCccEEEEEECC-------------eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEe
Confidence 2445555432 111222333567899999998 45555678999999863 332
Q ss_pred -EEEeccCCCceeEEEEEc-cCCeEEeeecC-cccc
Q 045370 191 -IRRFNHKKGVVTNLVVIR-QSSLLSEVSNC-QRKL 223 (350)
Q Consensus 191 -~~~~~~~~~~v~~l~~~~-~~~~l~~~~~~-~~~~ 223 (350)
...+. ..+..-.+++.+ +|.+.+++..+ .+++
T Consensus 258 ~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~ 292 (355)
T 3sre_A 258 PLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIF 292 (355)
T ss_dssp EEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHH
T ss_pred cCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEE
Confidence 22332 346678899999 59988766544 3444
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.50 E-value=0.0032 Score=55.40 Aligned_cols=143 Identities=7% Similarity=-0.010 Sum_probs=86.1
Q ss_pred CCceEEEEeeC--CCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccCC-----eEEEEeCCc
Q 045370 65 SSVTGLLTISG--GTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDG-----RIFVSPLKF 137 (350)
Q Consensus 65 ~~v~~~~~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 137 (350)
.....+++.+. ++.+ +.+...+.|+.+|..++..............++++++++ |+++...+ .+..++...
T Consensus 139 ~~P~gvavd~~s~~g~L-yv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDL-YWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEE-EEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEE-EEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678888763 3554 444434899999998887766655556689999999999 55544321 233333221
Q ss_pred cccccccccccccceeeeccCCceEEEEecC-Ce-EEEEe-CCCcEEEEECCCceEEEEec--cCCCceeEEEEEccCCe
Q 045370 138 LLLEDHFIVGEDQHSVLKGHNGSITALAFSA-SH-LISAS-EDKTVCLWDVTRRVSIRRFN--HKKGVVTNLVVIRQSSL 212 (350)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-l~s~~-~dg~v~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~~~ 212 (350)
.... ...+ ........++++| ++ |+.+. .++.|+.+|..++.....+. .....-..++|+|+++.
T Consensus 217 -~~~~--------~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 217 -GFTE--------RLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp -TTCC--------EEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred -Ceec--------cccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCE
Confidence 1000 0011 1234456788898 66 55444 56789999998776633332 11222346999999996
Q ss_pred EEeeecC
Q 045370 213 LSEVSNC 219 (350)
Q Consensus 213 l~~~~~~ 219 (350)
|+.+...
T Consensus 287 LYvad~~ 293 (433)
T 4hw6_A 287 AYIIYNG 293 (433)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 6655554
No 289
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.50 E-value=0.026 Score=48.68 Aligned_cols=137 Identities=17% Similarity=0.160 Sum_probs=85.4
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEEEEecC-----CceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccc-cc-cc
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQTQVYP-----QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHF-IV-GE 148 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~-~~ 148 (350)
++..++.+ .++.||.-++..+..-+.+..+ ..+..+..+|+|++|+..+ +..|.+..+..+...... .. ..
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 44445554 3578888888855444444443 2688999999999999886 568888888733211110 00 00
Q ss_pred ccceeeec------cCCceEEEEecCCe-----EEEEeCCCcEEEEECCCc--eEEEEec---------cCCCceeEEEE
Q 045370 149 DQHSVLKG------HNGSITALAFSASH-----LISASEDKTVCLWDVTRR--VSIRRFN---------HKKGVVTNLVV 206 (350)
Q Consensus 149 ~~~~~~~~------~~~~i~~~~~~~~~-----l~s~~~dg~v~iwd~~~~--~~~~~~~---------~~~~~v~~l~~ 206 (350)
-..+.+.- ...+|..+.|+|-+ |++-..|+.|++||+... ++. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 01111111 35789999999976 999999999999999852 122 222 12245677778
Q ss_pred EccCCeEEe
Q 045370 207 IRQSSLLSE 215 (350)
Q Consensus 207 ~~~~~~l~~ 215 (350)
.+++-.|..
T Consensus 188 g~~~lTLYv 196 (452)
T 3pbp_A 188 SKDGLTLYC 196 (452)
T ss_dssp CTTSSCEEE
T ss_pred cCCCcEEEE
Confidence 776544443
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.42 E-value=0.031 Score=47.06 Aligned_cols=152 Identities=10% Similarity=0.059 Sum_probs=82.5
Q ss_pred cccCCceEEEEeeCCCcEEEEEeCCCcE-EEEeC--CCCceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 62 EHKSSVTGLLTISGGTTFFVSSSLDATC-KVWDL--GSGILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 62 ~h~~~v~~~~~~~~~~~~l~s~~~d~~v-~vwd~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
.+...+..+.+.+ ++.+++.+. +|.+ +-+|- .+-+.+ .......+..+.+.+++..+++ +.+|.+++.+...+
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCC
Confidence 3445677888765 556665554 4544 33443 122222 1234567888999998876554 45788777642212
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEec---cCCCceeEEEEEccCCeEE
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFN---HKKGVVTNLVVIRQSSLLS 214 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~ 214 (350)
..-... . .+ .+ .+...+.++.+.+++ ++.++.+|.|. +....++.-..+. .....+.++.|.+++.+++
T Consensus 236 ~tW~~~--~-~~--~~-~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~ 308 (327)
T 2xbg_A 236 ENWGEL--L-SP--LR-RNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFI 308 (327)
T ss_dssp EEECCC--B-CT--TS-SCCSCEEEEEESSSSCEEEEESTTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEE
T ss_pred CeeEec--c-CC--cc-cCCcceEEEEecCCCEEEEEeCCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCceEE
Confidence 111000 0 00 00 122357889998877 66666678773 4444343222232 2345688899987666555
Q ss_pred eeecCcccccc
Q 045370 215 EVSNCQRKLKK 225 (350)
Q Consensus 215 ~~~~~~~~~~~ 225 (350)
++.++.+++.
T Consensus 309 -~G~~G~i~~~ 318 (327)
T 2xbg_A 309 -LGQKGILLRY 318 (327)
T ss_dssp -ECSTTEEEEE
T ss_pred -EcCCceEEEE
Confidence 5566666543
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.38 E-value=0.022 Score=52.58 Aligned_cols=135 Identities=10% Similarity=0.007 Sum_probs=79.3
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ecCCceeEEEEcCCCcEEEEEcc--CCeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VYPQAVTAIAFHPGEQLLFAGSI--DGRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~ 141 (350)
....++++...++.++++-...+.|.+.++......... ..-.....|+++|.+..|+.+.. .+.|...++...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~--- 160 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--- 160 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---
Confidence 567888887766777777777899999998865443333 23345789999997665555542 356766665421
Q ss_pred cccccccccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEcc
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQ 209 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 209 (350)
.........-...+.|+++++. +++-...+.|..+|+.................+|++..+
T Consensus 161 -------~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 161 -------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED 224 (619)
T ss_dssp -------SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS
T ss_pred -------ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC
Confidence 1111222234567889999854 444445678999988754332222212223345666544
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.33 E-value=0.047 Score=52.01 Aligned_cols=145 Identities=8% Similarity=0.021 Sum_probs=92.1
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 140 (350)
...|.++...+ ++. |..|+.++-|..+|..+++...... ....|.++..++++.. ..|+. +-|..||..+...
T Consensus 406 ~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 406 SNSVLCSLKDS-EGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI-WIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CSBEEEEEECT-TSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE-EEEET-TEEEEEESSSSSC
T ss_pred CcceEEEEECC-CCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE-EEEEC-CceEEEeCCCCeE
Confidence 45688887644 444 5557777779999988776543321 2356889988887764 44554 5688898775433
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc---CCCceeEEEEEccCCeEEee
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH---KKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~ 216 (350)
....... ........|.++...+++ |..|+.++-|..||..+++...-... ....|.++...++|.+.+++
T Consensus 482 ~~~~~~~-----~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 482 IHHYDTS-----NSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CEEECTT-----TSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred EecccCc-----ccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 2110000 000113678999999988 88888755688899887654432211 23468888888899877744
Q ss_pred e
Q 045370 217 S 217 (350)
Q Consensus 217 ~ 217 (350)
.
T Consensus 557 ~ 557 (781)
T 3v9f_A 557 G 557 (781)
T ss_dssp T
T ss_pred C
Confidence 4
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.30 E-value=0.0046 Score=58.62 Aligned_cols=142 Identities=17% Similarity=0.145 Sum_probs=80.7
Q ss_pred CceEEEEeeCCCcEEEEE-eCCC----cEEEEeCCCC-ceEEE-EecCCceeEEEEcCCCcEEEEEccC-----CeEEEE
Q 045370 66 SVTGLLTISGGTTFFVSS-SLDA----TCKVWDLGSG-ILIQT-QVYPQAVTAIAFHPGEQLLFAGSID-----GRIFVS 133 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~-~~d~----~v~vwd~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~ 133 (350)
.+....|+++++++++-+ ..+| .|+++|+.++ +.+.. +. .....++|+||++.|+....+ ..|+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 466777861466666543 3333 4999999998 63221 11 124578899999887776654 257777
Q ss_pred eCCccccccccccccccceeee-ccCCceEEEEecCCe--EEEEe---CCCcEEEEECCCc--eE-EEEe-ccCCCceeE
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLK-GHNGSITALAFSASH--LISAS---EDKTVCLWDVTRR--VS-IRRF-NHKKGVVTN 203 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~--l~s~~---~dg~v~iwd~~~~--~~-~~~~-~~~~~~v~~ 203 (350)
++.+..... ...+. ........+.|+|++ |+..+ ....|+++|+.++ .. +..+ ....+...+
T Consensus 253 ~lgt~~~~~--------~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 253 VMGKLQSED--------VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp ETTSCGGGC--------EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred ECCCCchhc--------EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 776432111 11211 222346678999999 44333 2346888999875 22 1333 233445555
Q ss_pred EEEEccCCeEEeee
Q 045370 204 LVVIRQSSLLSEVS 217 (350)
Q Consensus 204 l~~~~~~~~l~~~~ 217 (350)
+.|+..+.+++.+.
T Consensus 325 ~~~~~g~~l~~~t~ 338 (751)
T 2xe4_A 325 VQMHGTSHLVILTN 338 (751)
T ss_dssp EEEETTTEEEEEEC
T ss_pred EeeeeCCEEEEEeC
Confidence 55554444444433
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.27 E-value=0.0016 Score=61.03 Aligned_cols=135 Identities=9% Similarity=-0.095 Sum_probs=78.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCC-CcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEE-EEccCCeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLD-ATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLF-AGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d-~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~ 141 (350)
.....+++.+.++.++++-... +.|.+.++.......... .-.....|+|+|++..|+ +-+..+.|..+++......
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 4456777766555555544333 678887776432222211 223467899998765554 4455678999998631110
Q ss_pred cccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEE
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~ 207 (350)
.+............|++..+. +++....+.|..+|..+++.+..+.........|++.
T Consensus 576 --------~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 576 --------TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp --------EECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred --------EEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 000001111234456666667 6666677899999999998888775433334555443
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.27 E-value=0.036 Score=52.76 Aligned_cols=142 Identities=10% Similarity=0.083 Sum_probs=91.0
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE----ecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ----VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLL 139 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 139 (350)
...|.++...+ ++. +..|+.++-|..||..++...... .....|.++..++++.+ ..|+.++-+..+|..++.
T Consensus 362 ~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 362 NKVVSSVCDDG-QGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSCEEEEEECT-TSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCE
T ss_pred CcceEEEEEcC-CCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCc
Confidence 35678887644 344 566776777999998765433211 12356888888877654 456666778889876543
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEeccC-----CCceeEEEEEccCCeE
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNHK-----KGVVTNLVVIRQSSLL 213 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l 213 (350)
..... . .......|.++...+++ |..|+. +-|..||..+++........ ...|.++...++|.+.
T Consensus 439 ~~~~~---~-----~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 439 FQIIE---L-----EKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 509 (781)
T ss_dssp EEECC---S-----TTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred EEEec---c-----CCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence 22110 0 01234678999999888 777776 56899998876543322211 3578899999999887
Q ss_pred Eeee
Q 045370 214 SEVS 217 (350)
Q Consensus 214 ~~~~ 217 (350)
+++.
T Consensus 510 igt~ 513 (781)
T 3v9f_A 510 IGTF 513 (781)
T ss_dssp EEES
T ss_pred EEEc
Confidence 7443
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.25 E-value=0.0088 Score=53.13 Aligned_cols=152 Identities=8% Similarity=0.026 Sum_probs=89.9
Q ss_pred CceEEEEeeC-CCcEEEEEeCCCcEEEEeCCCCceEEEEecC----CceeEEEE-------cCCCcEEEEEccCC-----
Q 045370 66 SVTGLLTISG-GTTFFVSSSLDATCKVWDLGSGILIQTQVYP----QAVTAIAF-------HPGEQLLFAGSIDG----- 128 (350)
Q Consensus 66 ~v~~~~~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~----~~v~~~~~-------~~~~~~l~~~~~dg----- 128 (350)
....+++.|. +++++++....+.|++.|+.++.+....... .....++| ++++.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3567888763 4455555554577999999988776655432 25889999 99999777766543
Q ss_pred --eEEEEeCCc-cccccccccccccceeeeccCCceEEEEecCC-e--EEEEeCCCcEEEEECC-------CceE-----
Q 045370 129 --RIFVSPLKF-LLLEDHFIVGEDQHSVLKGHNGSITALAFSAS-H--LISASEDKTVCLWDVT-------RRVS----- 190 (350)
Q Consensus 129 --~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--l~s~~~dg~v~iwd~~-------~~~~----- 190 (350)
.|.+++... +..... ... ..+.. -.....++++|+ + +++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~--~~~---~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDR--SDI---QLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp EEEEEEEECCTTSCCSTT--SCE---EEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CceEEEEecCCCCceeec--ccc---eeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 266665332 111100 000 01111 123457788994 4 4455577889999987 4443
Q ss_pred ---------EEEeccCCCceeEEEEEccCCeEEeeecC-ccccc
Q 045370 191 ---------IRRFNHKKGVVTNLVVIRQSSLLSEVSNC-QRKLK 224 (350)
Q Consensus 191 ---------~~~~~~~~~~v~~l~~~~~~~~l~~~~~~-~~~~~ 224 (350)
+.... .......++|+|+|++|+.+... .++++
T Consensus 294 ~~~~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 294 KNNPNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp GGCTTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cccccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 22222 23446789999999965555544 34443
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.22 E-value=0.015 Score=48.95 Aligned_cols=143 Identities=8% Similarity=0.103 Sum_probs=92.1
Q ss_pred CcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCC----Cc---EEEEEcc---CCeEEEEeCC--cccccccc
Q 045370 77 TTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPG----EQ---LLFAGSI---DGRIFVSPLK--FLLLEDHF 144 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~i~d~~--~~~~~~~~ 144 (350)
..+++.....+-+.+||+ +|+.++.+.. +.++.+.+-|+ |+ ++++... ++.|.+|++. +..+...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i- 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM- 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC-
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec-
Confidence 356676777889999999 7888888754 56777777662 22 2333333 5789999773 2211110
Q ss_pred ccccccceeeeccCCceEEEEe--cCC-e---EEEEeCCCcEEEEEC-------CCceEEEEeccCCCceeEEEEEccCC
Q 045370 145 IVGEDQHSVLKGHNGSITALAF--SAS-H---LISASEDKTVCLWDV-------TRRVSIRRFNHKKGVVTNLVVIRQSS 211 (350)
Q Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~--~~~-~---l~s~~~dg~v~iwd~-------~~~~~~~~~~~~~~~v~~l~~~~~~~ 211 (350)
... ...+......+..+++ +|. + +++...+|.+..|++ .+.+.++++.. .+.+-.+...+...
T Consensus 117 --~~~-~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g 192 (355)
T 3amr_A 117 --TDP-DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG 192 (355)
T ss_dssp --SCT-TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT
T ss_pred --ccc-ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC
Confidence 000 0000011145566666 663 3 777778899999988 24567777774 46788999999888
Q ss_pred eEEeeecCccccccc
Q 045370 212 LLSEVSNCQRKLKKD 226 (350)
Q Consensus 212 ~l~~~~~~~~~~~~~ 226 (350)
.|+.+-.+..+|.+.
T Consensus 193 ~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 193 RLYIAEEDEAIWKFS 207 (355)
T ss_dssp EEEEEETTTEEEEEE
T ss_pred eEEEecccceEEEEe
Confidence 888888887777765
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.17 E-value=0.11 Score=48.02 Aligned_cols=121 Identities=7% Similarity=-0.103 Sum_probs=77.4
Q ss_pred ccCCceEEEEeeCCCcEEEEE-eCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEE-ccCCeEEEEeCCcccc
Q 045370 63 HKSSVTGLLTISGGTTFFVSS-SLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAG-SIDGRIFVSPLKFLLL 140 (350)
Q Consensus 63 h~~~v~~~~~~~~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~ 140 (350)
.-....++++.|..+.++++- +..+.|...++...........-.....+++++++..|+.+ ...+.|..+|+.....
T Consensus 121 ~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 335568898887666655554 23567888887755444444444568899999976666655 4568899998863211
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEe
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRF 194 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~ 194 (350)
..+.........+++..+. +++-...+.|...|..+++....+
T Consensus 201 -----------~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 201 -----------EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp -----------EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred -----------EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEE
Confidence 1222333455678887766 555556788999998776543333
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.17 E-value=0.064 Score=46.29 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=73.4
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCc------------eEEEEe-------cCCceeEEEEcCC---CcEEEE
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGI------------LIQTQV-------YPQAVTAIAFHPG---EQLLFA 123 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~------------~~~~~~-------~~~~v~~~~~~~~---~~~l~~ 123 (350)
.|..+..++ +|.+||..+ +..|.|-.+..+. ....+. ...+|..+.|||- +..|++
T Consensus 67 ~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 566776644 778887775 5678888877321 111222 2467999999994 568999
Q ss_pred EccCCeEEEEeCCccccccccccc-cccceeeeccCCceEEEEecCCe--EEEEe--CCCcEEEE
Q 045370 124 GSIDGRIFVSPLKFLLLEDHFIVG-EDQHSVLKGHNGSITALAFSASH--LISAS--EDKTVCLW 183 (350)
Q Consensus 124 ~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--l~s~~--~dg~v~iw 183 (350)
-..|+.|++||+....... .... .............|.+++|.+++ |...+ .+|.|+-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P-~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKP-IVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCC-EEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCC-cchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999998622111 1111 00111222334678899999988 66544 77877654
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.05 E-value=0.19 Score=46.32 Aligned_cols=149 Identities=9% Similarity=-0.009 Sum_probs=84.3
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceeEEEEcCCCcEEEEEc-c-CCeEEEEeCCccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-YPQAVTAIAFHPGEQLLFAGS-I-DGRIFVSPLKFLLLE 141 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~-dg~i~i~d~~~~~~~ 141 (350)
....++++...+++++++-+..+.|.+.++.......... .-.....++++|....|+.+. . .+.|...++...
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~--- 468 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS--- 468 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC---
Confidence 5667888876567777777778899999987554332232 235688999999744444443 2 356666665421
Q ss_pred cccccccccceeeeccCCceEEEEecCCe--EEEE-eCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH--LISA-SEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.........-...+.|++++.. |+.+ +..+.|..+++........+........+|+...+ .|+.+..
T Consensus 469 -------~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~ 539 (619)
T 3s94_A 469 -------DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDW 539 (619)
T ss_dssp -------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECT
T ss_pred -------ccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeec
Confidence 1111222234567889998754 5544 45578888888643221112222233456666543 4554444
Q ss_pred C-cccccc
Q 045370 219 C-QRKLKK 225 (350)
Q Consensus 219 ~-~~~~~~ 225 (350)
. ..++.+
T Consensus 540 ~~~~I~~~ 547 (619)
T 3s94_A 540 QRRSIERV 547 (619)
T ss_dssp TSSCEEEE
T ss_pred CCCeEEEE
Confidence 3 334433
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.093 Score=46.63 Aligned_cols=119 Identities=10% Similarity=0.049 Sum_probs=64.4
Q ss_pred CCceEEEE-------eeCCCcEEEEEeCCC-------cEEEEeCCC-CceE-----EEEecCCceeEEEEcCC-CcEEEE
Q 045370 65 SSVTGLLT-------ISGGTTFFVSSSLDA-------TCKVWDLGS-GILI-----QTQVYPQAVTAIAFHPG-EQLLFA 123 (350)
Q Consensus 65 ~~v~~~~~-------~~~~~~~l~s~~~d~-------~v~vwd~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~l~~ 123 (350)
.....++| .+ ++..++.+...+ .|.+.+... +... ..+..-.....++++|+ +.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCC-CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEE
Confidence 35788888 66 445444444433 266665443 2221 22222234567889995 455556
Q ss_pred EccCCeEEEEeCC-------ccccccccccc----cccceeeeccCCceEEEEecCCe---EEEEeCCCcEEEEEC
Q 045370 124 GSIDGRIFVSPLK-------FLLLEDHFIVG----EDQHSVLKGHNGSITALAFSASH---LISASEDKTVCLWDV 185 (350)
Q Consensus 124 ~~~dg~i~i~d~~-------~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~---l~s~~~dg~v~iwd~ 185 (350)
-..++.|..+|+. ++......... ...+... +.....+.++|+|++ +++-+....|+.+|.
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 6677889999987 33220000000 0011111 223456899999998 344456778888654
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.88 E-value=0.16 Score=42.64 Aligned_cols=138 Identities=7% Similarity=-0.067 Sum_probs=78.7
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE--ecCCceeEEEEcCCCcEEEEEccCCeEEEEeC--Ccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ--VYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPL--KFLLL 140 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~ 140 (350)
..+..+.+.+ ++..++.+ .++.|.. ..+.|+.-... .....+..+.+.+++.+++++...+..+-.|- .+...
T Consensus 122 ~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE
T ss_pred CCeEEEEEEC-CCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE
Confidence 4466777655 34555544 4564422 12223322222 34457889999998888877754443333332 11110
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEecc----CCCceeEEEEEccCCeEEe
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFNH----KKGVVTNLVVIRQSSLLSE 215 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~~ 215 (350)
.-......+..+.+.+++ ++.++.+|.+++++...++.-..+.. +...+.++.+.+++.++++
T Consensus 199 ------------~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 266 (327)
T 2xbg_A 199 ------------HNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA 266 (327)
T ss_dssp ------------EECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE
T ss_pred ------------CCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE
Confidence 011234578889998888 77777888888775333443333321 2235788889888887775
Q ss_pred ee
Q 045370 216 VS 217 (350)
Q Consensus 216 ~~ 217 (350)
+.
T Consensus 267 g~ 268 (327)
T 2xbg_A 267 GG 268 (327)
T ss_dssp ES
T ss_pred eC
Confidence 54
No 303
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.79 E-value=0.18 Score=46.08 Aligned_cols=116 Identities=10% Similarity=0.073 Sum_probs=70.1
Q ss_pred EEEEEe------CCCcEEEEeCCCCceEEEEecCCc------------------------------------------ee
Q 045370 79 FFVSSS------LDATCKVWDLGSGILIQTQVYPQA------------------------------------------VT 110 (350)
Q Consensus 79 ~l~s~~------~d~~v~vwd~~~~~~~~~~~~~~~------------------------------------------v~ 110 (350)
.++.++ .++.|.-+|..+|+.+........ -.
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 455554 378999999999998876543210 01
Q ss_pred EEEEcCCCcEEEEEcc--------------------C----CeEEEEeCCccccccccccccccceeeeccCCceEEEEe
Q 045370 111 AIAFHPGEQLLFAGSI--------------------D----GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF 166 (350)
Q Consensus 111 ~~~~~~~~~~l~~~~~--------------------d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 166 (350)
.++++|....++.++. | +.|..+|..+++....+.........+.....++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 3566777777776653 2 58999999887655432111100000111112222 222
Q ss_pred c-CCe-----EEEEeCCCcEEEEECCCceEEEEec
Q 045370 167 S-ASH-----LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 167 ~-~~~-----l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
. .++ ++.++.+|.++++|..+|+.+..+.
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 1 222 7788999999999999999987765
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.75 E-value=0.2 Score=42.58 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=54.7
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccccee---eeccccCCceEEEEeeC--
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH---YSLEHKSSVTGLLTISG-- 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~-- 75 (350)
|+|.|||+++++ ..+|.|.+++ .. . ...+. ...........+++.+.
T Consensus 36 ia~~pdG~l~V~-e~~g~I~~i~-~g-~-------------------------~~~~~~~~v~~~g~~~p~gia~~pdf~ 87 (352)
T 2ism_A 36 LAFLPDGGMLIA-ERPGRIRLFR-EG-R-------------------------LSTYAELSVYHRGESGLLGLALHPRFP 87 (352)
T ss_dssp EEECTTSCEEEE-ETTTEEEEEE-TT-E-------------------------EEEEEECCCCCSTTCSEEEEEECTTTT
T ss_pred EEEcCCCeEEEE-eCCCeEEEEE-CC-C-------------------------ccEeecceEeecCCCCceeEEECCCCC
Confidence 578999986655 5669999887 31 0 00000 11122356788888664
Q ss_pred -CCcEEEEEeCC-----CcEEEEeCCCCce-----EEE-Eec----CCceeEEEEcCCCcEEEEE
Q 045370 76 -GTTFFVSSSLD-----ATCKVWDLGSGIL-----IQT-QVY----PQAVTAIAFHPGEQLLFAG 124 (350)
Q Consensus 76 -~~~~l~s~~~d-----~~v~vwd~~~~~~-----~~~-~~~----~~~v~~~~~~~~~~~l~~~ 124 (350)
++.++++-... +.|..++...+.. +.. +.. ......++|.|+|.++++.
T Consensus 88 ~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 88 QEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 34544444432 5677888765421 111 221 1234689999999766654
No 305
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.26 E-value=0.078 Score=41.37 Aligned_cols=150 Identities=10% Similarity=0.016 Sum_probs=83.8
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCce------EEEEecC--CceeEEEEcCCCcEEEEEccCCeEEEEeCC
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGIL------IQTQVYP--QAVTAIAFHPGEQLLFAGSIDGRIFVSPLK 136 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~------~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 136 (350)
..+..++|+| ++.+.+. .+|.+.-.+..+... -..+... ....++.|+|+|.+.++ .||.|+-++-.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 3677998877 7775555 678766666654211 1112211 11578999999998888 56999888754
Q ss_pred ccccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCce------EEEEec-cCCCceeEEEEEc
Q 045370 137 FLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRV------SIRRFN-HKKGVVTNLVVIR 208 (350)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~------~~~~~~-~~~~~v~~l~~~~ 208 (350)
+..... +.... ...-..--..+..|.+.|++ |.+.. |+.++-+...+.. ....+- ..-...+-+.|.|
T Consensus 116 ~~~~~~-Wl~~a--~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 116 QSDTDN-WIARA--TEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CSTTCC-HHHHS--EEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred cCCCCc-eeccc--cEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 321111 11110 00111112467999999999 77777 8886543332111 011111 1122344567889
Q ss_pred cCCeEEeeecCcccccc
Q 045370 209 QSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 209 ~~~~l~~~~~~~~~~~~ 225 (350)
++.+.++. +++++..
T Consensus 192 ~G~l~~v~--~g~~Y~~ 206 (236)
T 1tl2_A 192 VGTLFGVQ--GGKFYED 206 (236)
T ss_dssp TSCEEEEE--TTEEEEE
T ss_pred CCcEEEEe--CCeEEec
Confidence 99888855 5555544
No 306
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.24 E-value=0.081 Score=41.27 Aligned_cols=136 Identities=9% Similarity=-0.021 Sum_probs=77.5
Q ss_pred CcEEEEEeCCCcEEEEeCCCCc------eEEEEec--CCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccc
Q 045370 77 TTFFVSSSLDATCKVWDLGSGI------LIQTQVY--PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGE 148 (350)
Q Consensus 77 ~~~l~s~~~d~~v~vwd~~~~~------~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 148 (350)
..+|+....| +|+.=.+..+. ....+.. =..+..++|+|+|.+.++ .+|.++-.+..+......... .
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-A 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-C
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-c
Confidence 3456666666 66665555443 2223333 247889999998886666 688887777653222111100 0
Q ss_pred ccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCc---------eEEEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 149 DQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRR---------VSIRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 149 ~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
..+-.. +- ..-.++.|.|++ |..+ .||.|+-++..+. ..+.. .--..+..|.|.|+|.+.++.
T Consensus 80 t~IG~~-Gw-~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~--~gw~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 80 KKIGNG-GW-NQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGS--GGWSGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp EEEECS-CG-GGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEEC--SSGGGEEEEEECTTSCEEEEE--
T ss_pred cEeccc-cc-ccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEecc--CCCCceEEEEECCCceEEEEe--
Confidence 000000 11 113678899999 5555 6799988876331 11111 111357899999999998866
Q ss_pred Ccccc
Q 045370 219 CQRKL 223 (350)
Q Consensus 219 ~~~~~ 223 (350)
++++.
T Consensus 153 dg~ly 157 (236)
T 1tl2_A 153 GQQFY 157 (236)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 55443
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.00 E-value=0.52 Score=38.72 Aligned_cols=132 Identities=10% Similarity=0.088 Sum_probs=66.5
Q ss_pred CCcEEEEEeCCC-----cEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccC-------CeEEEEeCCccccc
Q 045370 76 GTTFFVSSSLDA-----TCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSID-------GRIFVSPLKFLLLE 141 (350)
Q Consensus 76 ~~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~ 141 (350)
++.+++.|+.++ .+.+||+.+.+....-. ....-.+++.. ++..++.|+.+ ..+.+||+.+....
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 557777777654 47788988876554422 22222233332 56666666542 35888888765432
Q ss_pred cccccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCceEE--EEeccCCCceeEEEEEccCCeE
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRVSI--RRFNHKKGVVTNLVVIRQSSLL 213 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l 213 (350)
.. . .+....... ++....+. ++.|+.+ ..+.+||+.+.+-. ..+...... .++ ..-+++++
T Consensus 187 ~~---~-----~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~-~~~~~~i~ 255 (302)
T 2xn4_A 187 YI---A-----EMSTRRSGA-GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AGV-CAVNGLLY 255 (302)
T ss_dssp EE---C-----CCSSCCBSC-EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEE-EEETTEEE
T ss_pred EC---C-----CCccccccc-cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-CeE-EEECCEEE
Confidence 21 0 111111111 22233344 6666654 36899999876432 222211111 122 22356666
Q ss_pred EeeecC
Q 045370 214 SEVSNC 219 (350)
Q Consensus 214 ~~~~~~ 219 (350)
+.|+.+
T Consensus 256 v~GG~~ 261 (302)
T 2xn4_A 256 VVGGDD 261 (302)
T ss_dssp EECCBC
T ss_pred EECCcC
Confidence 666644
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.97 E-value=0.54 Score=39.84 Aligned_cols=60 Identities=13% Similarity=0.057 Sum_probs=35.7
Q ss_pred CceEEEEecCCe-EEEEeCCCcEEEEECCCce----E--EEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 159 GSITALAFSASH-LISASEDKTVCLWDVTRRV----S--IRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~----~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
.....++|.... +++....+.|...++.... . ...+......+..+++.|+|.+.++...
T Consensus 268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 268 FPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred CCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 356677774444 4444455677777765332 1 1222222357899999999987776543
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.84 E-value=0.61 Score=38.27 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=57.3
Q ss_pred CCcEEEEEeCCC-----cEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccccccc
Q 045370 76 GTTFFVSSSLDA-----TCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLLLEDH 143 (350)
Q Consensus 76 ~~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 143 (350)
++.+++.|+.++ .+.+||+.+++....-. ....-.+++.. ++..++.|+.+ ..+.+||+.+......
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 566777776543 58889988876554432 22222223322 66777777654 4688888876543221
Q ss_pred cccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCceE
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRVS 190 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~~ 190 (350)
. .+........++. ..+. ++.|+.+ ..+.+||+.+.+-
T Consensus 191 ---~-----~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 191 ---T-----PMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp ---C-----CCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ---C-----CCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 0 1111111112222 3344 6666654 4689999987653
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.82 E-value=0.74 Score=39.05 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=54.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeecccccccee---eeccccCCceEEEEeeC--
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLH---YSLEHKSSVTGLLTISG-- 75 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~-- 75 (350)
|+|.|||+++++ ..+|.|.+++... ...+. ...........+++.+.
T Consensus 34 ia~~pdG~l~V~-e~~g~I~~~d~~G---------------------------~~~~~~~~v~~~g~~g~~gia~~pdf~ 85 (354)
T 3a9g_A 34 IAPLGGGRYLVT-ERPGRLVLISPSG---------------------------KKLVASFDVANVGEAGLLGLALHPEFP 85 (354)
T ss_dssp EEEEETTEEEEE-ETTTEEEEECSSC---------------------------EEEEEECCCCCSTTCSEEEEEECTTTT
T ss_pred EEEcCCCeEEEE-eCCCEEEEEeCCC---------------------------ceEeeccceeecCCCceeeEEeCCCCC
Confidence 578999975554 5669998887431 00011 01112345788888764
Q ss_pred -CCcEEEEEeC---C----CcEEEEeCCCC--c-----eEE-EEec--CCceeEEEEcCCCcEEEEE
Q 045370 76 -GTTFFVSSSL---D----ATCKVWDLGSG--I-----LIQ-TQVY--PQAVTAIAFHPGEQLLFAG 124 (350)
Q Consensus 76 -~~~~l~s~~~---d----~~v~vwd~~~~--~-----~~~-~~~~--~~~v~~~~~~~~~~~l~~~ 124 (350)
++.++++-+. + ..|..|+...+ . .+. .+.. ......++|.|+|.++++.
T Consensus 86 ~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 86 KKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp TSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred cCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 4555554432 3 56777776654 1 111 1221 1235679999999866664
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.69 E-value=0.77 Score=38.25 Aligned_cols=215 Identities=8% Similarity=0.074 Sum_probs=107.7
Q ss_pred ecCCCCEEEEEeCCCcEEEEeCccccccccccccccc-------------cccccEEEeeccccccceeeecccc----C
Q 045370 3 FSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSD-------------QLDQRLIEMELRSLRSLLHYSLEHK----S 65 (350)
Q Consensus 3 ~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~h~----~ 65 (350)
.+|..+.+|--. ..++.|+|+++..+.........- -....+++++......+...+..|. .
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~ 152 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC 152 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTC
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccc
Confidence 356777676654 578899998864443322221100 0123455554433333433333332 3
Q ss_pred CceEEEEeeCCCcEEEEEe-------CCCcEEEEeCCCCceEEEEecCCceeEEEEc--CCC-cEEEEEcc---CCeEEE
Q 045370 66 SVTGLLTISGGTTFFVSSS-------LDATCKVWDLGSGILIQTQVYPQAVTAIAFH--PGE-QLLFAGSI---DGRIFV 132 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~~~~---dg~i~i 132 (350)
.|..-...+ +.++++..+ -.|.+.+|..+.+.....-+|......+.+. +.. ..++.+.. .+.+++
T Consensus 153 QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhI 231 (365)
T 2xzh_A 153 QIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 231 (365)
T ss_dssp EEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 344444433 444444332 2366788888765433332332222111111 111 13333322 268999
Q ss_pred EeCCccccccccccccccceeee---ccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEE
Q 045370 133 SPLKFLLLEDHFIVGEDQHSVLK---GHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVI 207 (350)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~ 207 (350)
.++........ ....+.+..+. ...+-..++..++.. +..-..-|.|++||+.++.++..-.....+|..-+.+
T Consensus 232 iEi~~~~~~~~-~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~ 310 (365)
T 2xzh_A 232 IEVGTPPTGNQ-PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 310 (365)
T ss_dssp EECSSCCTTCC-CCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEcCCCCCCCC-CcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEeccc
Confidence 98854311110 00111111111 124556678888766 7777888999999999999998877656666555554
Q ss_pred ccCCeEEeeecCc
Q 045370 208 RQSSLLSEVSNCQ 220 (350)
Q Consensus 208 ~~~~~l~~~~~~~ 220 (350)
....-+++....+
T Consensus 311 ~~~~Gi~~Vnr~G 323 (365)
T 2xzh_A 311 EATAGIIGVNRKG 323 (365)
T ss_dssp GGGTEEEEEETTC
T ss_pred CCCCcEEEEcCCC
Confidence 4433333333333
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.68 E-value=0.52 Score=39.96 Aligned_cols=133 Identities=6% Similarity=-0.045 Sum_probs=73.1
Q ss_pred CCCcEEEEeCCC--CceEEE-Eec------CCceeEEEEcC--CCc-EEEEE-cc--CCeEEEEeCCccccccccccccc
Q 045370 85 LDATCKVWDLGS--GILIQT-QVY------PQAVTAIAFHP--GEQ-LLFAG-SI--DGRIFVSPLKFLLLEDHFIVGED 149 (350)
Q Consensus 85 ~d~~v~vwd~~~--~~~~~~-~~~------~~~v~~~~~~~--~~~-~l~~~-~~--dg~i~i~d~~~~~~~~~~~~~~~ 149 (350)
.+|.|.++|+.+ ++.... +.. .-....+.+.+ ++. +|+++ .. +..|.+|++...... ..
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~------~~ 154 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS------LL 154 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE------EE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE------EE
Confidence 689999999984 332211 211 13567777766 343 45444 22 467788777642111 01
Q ss_pred cceeeec-cCCceEEEEecCCe-EEEEeC------------------CCcEEEEECCCceEEEEeccCCCceeEEEEEcc
Q 045370 150 QHSVLKG-HNGSITALAFSASH-LISASE------------------DKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQ 209 (350)
Q Consensus 150 ~~~~~~~-~~~~i~~~~~~~~~-l~s~~~------------------dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~ 209 (350)
.+..+.+ .-...+.+.+.+++ +..++. .|.|+-+|...-+ .+...-.....++|+||
T Consensus 155 ~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~---~~~~~l~~pNGia~spD 231 (355)
T 3sre_A 155 HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR---VVAEGFDFANGINISPD 231 (355)
T ss_dssp EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE---EEEEEESSEEEEEECTT
T ss_pred EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE---EeecCCcccCcceECCC
Confidence 1112222 23467899999988 544432 2456666653222 22222345688999999
Q ss_pred CCeEEeeecCccccccc
Q 045370 210 SSLLSEVSNCQRKLKKD 226 (350)
Q Consensus 210 ~~~l~~~~~~~~~~~~~ 226 (350)
++.|+.+......+...
T Consensus 232 g~~lYvadt~~~~I~~~ 248 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVY 248 (355)
T ss_dssp SSEEEEEEGGGTEEEEE
T ss_pred CCEEEEEeCCCCeEEEE
Confidence 99888777654444333
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.44 E-value=0.59 Score=39.64 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=18.4
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCc
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMT 25 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~ 25 (350)
|+|.|||++|+.+...|.|++++..
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC
Confidence 5799999834445567999998754
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.38 E-value=0.81 Score=37.77 Aligned_cols=105 Identities=8% Similarity=-0.014 Sum_probs=56.4
Q ss_pred CCcEEEEEeCC-----CcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccccccc
Q 045370 76 GTTFFVSSSLD-----ATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLLLEDH 143 (350)
Q Consensus 76 ~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 143 (350)
++.+++.|+.+ ..+.+||+.+++....-. ....-.+++.. ++..++.|+.+ ..+.+||+.+......
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 199 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI 199 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC
Confidence 55677777644 358889998876544322 22222233332 56677777654 4688888876543221
Q ss_pred cccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCceE
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRVS 190 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~~ 190 (350)
. .+........++.+ .+. ++.|+.+ ..+.+||+.+.+-
T Consensus 200 ~--------~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 200 T--------AMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp C--------CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred C--------CCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 1 11111111222233 344 6666654 4689999987653
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.35 E-value=0.88 Score=37.41 Aligned_cols=132 Identities=9% Similarity=0.023 Sum_probs=66.5
Q ss_pred CCcEEEEEeCC------CcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEcc---------CCeEEEEeCCcc
Q 045370 76 GTTFFVSSSLD------ATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSI---------DGRIFVSPLKFL 138 (350)
Q Consensus 76 ~~~~l~s~~~d------~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~ 138 (350)
++.+++.|+.+ ..+.+||+.+.+....-. ....-.+++. -++..++.|+. -..+.+||+.+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 56777777765 458899998876554422 2222222332 25666666653 345888888765
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCceE--EEEeccCCCceeEEEEEccC
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRVS--IRRFNHKKGVVTNLVVIRQS 210 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~ 210 (350)
...... .+....... ++....+. ++.|+.+ ..+.+||+.+.+- +..+.........+.+ ++
T Consensus 180 ~W~~~~--------~~p~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 248 (306)
T 3ii7_A 180 TWTELC--------PMIEARKNH-GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GS 248 (306)
T ss_dssp EEEEEC--------CCSSCCBSC-EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TT
T ss_pred eEEECC--------Cccchhhcc-eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CC
Confidence 432211 111111111 22223344 6666543 4688999987542 2222211111222222 56
Q ss_pred CeEEeeecC
Q 045370 211 SLLSEVSNC 219 (350)
Q Consensus 211 ~~l~~~~~~ 219 (350)
++++.|+.+
T Consensus 249 ~i~v~GG~~ 257 (306)
T 3ii7_A 249 IVYVLAGFQ 257 (306)
T ss_dssp EEEEEECBC
T ss_pred EEEEEeCcC
Confidence 666666644
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.21 E-value=1.4 Score=38.29 Aligned_cols=157 Identities=12% Similarity=0.085 Sum_probs=86.4
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCC-ceEEEEec-----CCceeEEEEcCCCcEEEEEcc-------CCeE
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSG-ILIQTQVY-----PQAVTAIAFHPGEQLLFAGSI-------DGRI 130 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~-------dg~i 130 (350)
...|.-..|.+++ .|+..+ +..|.-|++... .+...+.. ...|..-..++++++++..+- .|.+
T Consensus 105 ~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~m 181 (494)
T 1bpo_A 105 TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAM 181 (494)
T ss_dssp SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEE
T ss_pred CCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceE
Confidence 4678888898754 344443 567999999743 34444431 234666666777777664331 3566
Q ss_pred EEEeCCcccccc---------ccccc-----------------cccceee-----------------------eccCCce
Q 045370 131 FVSPLKFLLLED---------HFIVG-----------------EDQHSVL-----------------------KGHNGSI 161 (350)
Q Consensus 131 ~i~d~~~~~~~~---------~~~~~-----------------~~~~~~~-----------------------~~~~~~i 161 (350)
.+|..+...... ..... ...++.+ ....+-.
T Consensus 182 QLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP 261 (494)
T 1bpo_A 182 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 261 (494)
T ss_dssp EEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE
T ss_pred EEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCce
Confidence 777665432000 00000 0000000 0012234
Q ss_pred EEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecCcccc
Q 045370 162 TALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNCQRKL 223 (350)
Q Consensus 162 ~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~~~~~ 223 (350)
.++..++.. +..-..-|.|++||+.++.++..-.....+|..-+.+....-+++....+.++
T Consensus 262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred eEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 455566555 66677789999999999999987765556665555544433333343444333
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.10 E-value=1.3 Score=37.46 Aligned_cols=145 Identities=12% Similarity=0.112 Sum_probs=76.3
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCc-eEEEEe----cCCceeEEEEcCC---CcEEEEEcc----C----
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGI-LIQTQV----YPQAVTAIAFHPG---EQLLFAGSI----D---- 127 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~----d---- 127 (350)
-.....++|.+ ++. ++.+..+|.|.+++ .++. .+..+. .......|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~p-dG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLG-GGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEE-TTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcC-CCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45678899877 556 44556679999997 3454 111111 1345889999997 555555433 3
Q ss_pred CeEEEEeCCccccccccccccccc-eeeec-cCCceEEEEecCCe-EEEEeCC--------------CcEEEEECCCc--
Q 045370 128 GRIFVSPLKFLLLEDHFIVGEDQH-SVLKG-HNGSITALAFSASH-LISASED--------------KTVCLWDVTRR-- 188 (350)
Q Consensus 128 g~i~i~d~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~-l~s~~~d--------------g~v~iwd~~~~-- 188 (350)
..|..|+....... . ...+.+ ..+.. .......|+|.|++ |+.+..| |.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~--~-~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 105 NRVIRGRLDGSTFK--L-KEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEECSSSCC--E-EEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred eEEEEEEECCCCcC--c-CccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 56777776532100 0 000000 11111 11124679999999 4444322 45555554321
Q ss_pred -------eEEEEeccCCCceeEEEEEc-cCCeEEee
Q 045370 189 -------VSIRRFNHKKGVVTNLVVIR-QSSLLSEV 216 (350)
Q Consensus 189 -------~~~~~~~~~~~~v~~l~~~~-~~~~l~~~ 216 (350)
..+.. .++. ....++|+| ++.++++-
T Consensus 182 ~~npf~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 182 ADNPFPNSPIWS-YGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTSSSTTCCEEE-ECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCcEEE-EccC-CcceEEEeCCCCCEEEEe
Confidence 01211 1232 347899999 67766643
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.08 E-value=0.8 Score=37.60 Aligned_cols=104 Identities=10% Similarity=0.077 Sum_probs=54.9
Q ss_pred CCcEEEEEeCC-------CcEEEEeCCCCceEEEE--ecCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccccc
Q 045370 76 GTTFFVSSSLD-------ATCKVWDLGSGILIQTQ--VYPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLLLE 141 (350)
Q Consensus 76 ~~~~l~s~~~d-------~~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 141 (350)
++.+++.|+.+ ..+.+||+.+++....- .....-.+++.. ++..++.|+.+ ..+.+||+.+....
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 55667777653 35889999887655442 222222233332 56777777654 46888998765432
Q ss_pred cccccccccceeeeccCCceEEEEecCCe-EEEEeCCC-----cEEEEECCCce
Q 045370 142 DHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDK-----TVCLWDVTRRV 189 (350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg-----~v~iwd~~~~~ 189 (350)
... .+........ +....+. ++.|+.++ .+.+||+.+.+
T Consensus 234 ~~~--------~~~~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 234 QVA--------DMNMCRRNAG-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEC--------CCSSCCBSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCC--------CCCCccccCe-EEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 211 0111111111 2223334 66666543 47888887654
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.05 E-value=0.11 Score=43.69 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=71.1
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecC--CceeEEEEc--C-CCcEEEEE-ccCCeEEEEeCCccccccccccccccc
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYP--QAVTAIAFH--P-GEQLLFAG-SIDGRIFVSPLKFLLLEDHFIVGEDQH 151 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~v~~~~~~--~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~ 151 (350)
.+++.++.||.|.-.|..+|+....+... .++....-. + ++..++.. +.||.|+.++..++.........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~---- 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR---- 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH----
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc----
Confidence 46888999999999999999999987654 232221111 1 22333333 68999999998876433211111
Q ss_pred eeeeccCCceEE---EEe------cCCe-EEEEeCCCcEEEEECCCceEEEEec
Q 045370 152 SVLKGHNGSITA---LAF------SASH-LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 152 ~~~~~~~~~i~~---~~~------~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
.+. ...++.. ... +.++ +++|+.+|.+...|+++|+.+.++.
T Consensus 87 -~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 87 -QLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp -HHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred -cce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 000 1112221 001 2355 8999999999999999999999986
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.98 E-value=1.2 Score=36.40 Aligned_cols=105 Identities=9% Similarity=0.030 Sum_probs=56.0
Q ss_pred CCcEEEEEeCC-----CcEEEEeCCCCc---eEEEE--ecCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCcccc
Q 045370 76 GTTFFVSSSLD-----ATCKVWDLGSGI---LIQTQ--VYPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLLL 140 (350)
Q Consensus 76 ~~~~l~s~~~d-----~~v~vwd~~~~~---~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~ 140 (350)
++.+++.|+.+ ..+.+||+.+++ ..... .....-.+++.. ++..++.|+.+ ..+.+||..+...
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 55677777765 468899998876 44432 222222233332 56677777643 3688888875443
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCceE
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRVS 190 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~~ 190 (350)
.... .+........++.+ .+. ++.|+.+ ..+.+||+.+.+-
T Consensus 141 ~~~~--------~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 141 SMLG--------DMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp EEEE--------ECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred EECC--------CCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 2210 11111111122222 333 6666654 4688999887653
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.30 E-value=2.1 Score=36.05 Aligned_cols=48 Identities=10% Similarity=0.109 Sum_probs=27.5
Q ss_pred CcEEEEeCCCCceEEEEecC--Cce-eEEEEcCCCcEEEEEcc------CCeEEEEeC
Q 045370 87 ATCKVWDLGSGILIQTQVYP--QAV-TAIAFHPGEQLLFAGSI------DGRIFVSPL 135 (350)
Q Consensus 87 ~~v~vwd~~~~~~~~~~~~~--~~v-~~~~~~~~~~~l~~~~~------dg~i~i~d~ 135 (350)
..+.+||+.+.+....-..+ ... .+++.. ++..++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 47889999887655543322 222 333333 5666666653 345777776
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.91 E-value=1.8 Score=40.56 Aligned_cols=114 Identities=8% Similarity=0.047 Sum_probs=60.3
Q ss_pred CCcEEEEEeCCC--cEEEEeCCCCceEEEEe-----cC-CceeEEEEcCC-CcEEEEEcc--C-----CeEEEEeCCccc
Q 045370 76 GTTFFVSSSLDA--TCKVWDLGSGILIQTQV-----YP-QAVTAIAFHPG-EQLLFAGSI--D-----GRIFVSPLKFLL 139 (350)
Q Consensus 76 ~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~-----~~-~~v~~~~~~~~-~~~l~~~~~--d-----g~i~i~d~~~~~ 139 (350)
++.+++.|+.++ .+.+||+.++....... .. ....++.+..+ +..++.|+. + ..+.+||+.+..
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 667788887765 68999998876544321 11 12333555655 666677765 2 468889988654
Q ss_pred cccccccccccceeee-ccCCceEEEEecCCe-EEEEeC--------CCcEEEEECCCceEE
Q 045370 140 LEDHFIVGEDQHSVLK-GHNGSITALAFSASH-LISASE--------DKTVCLWDVTRRVSI 191 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~-l~s~~~--------dg~v~iwd~~~~~~~ 191 (350)
. .. ...-..+.... .......++.+..+. ++.|+. ...+.+||+.+.+-.
T Consensus 580 w-~~-~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 580 A-TE-PITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp S-SC-CEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred c-cc-ceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2 00 00000000000 111122233333244 666664 346899999876543
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.89 E-value=4.2 Score=38.02 Aligned_cols=109 Identities=9% Similarity=0.109 Sum_probs=60.4
Q ss_pred CCcEEEEEeCCC------cEEEEeCCCCceEEE--EecCCceeEEEEcCCCcEEEEEccCC--eEEEEeCCccccccccc
Q 045370 76 GTTFFVSSSLDA------TCKVWDLGSGILIQT--QVYPQAVTAIAFHPGEQLLFAGSIDG--RIFVSPLKFLLLEDHFI 145 (350)
Q Consensus 76 ~~~~l~s~~~d~------~v~vwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~ 145 (350)
++.+++.||.++ .+.+||+.+.+.... +.....-.+++.-.++..++.|+.++ .+.+||..+........
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 556777777543 478899888755443 22222333444434778888887654 78999988654332111
Q ss_pred cccccceeeeccCCceEEEEecCC-e--EEEEeC--C-----CcEEEEECCCce
Q 045370 146 VGEDQHSVLKGHNGSITALAFSAS-H--LISASE--D-----KTVCLWDVTRRV 189 (350)
Q Consensus 146 ~~~~~~~~~~~~~~~i~~~~~~~~-~--l~s~~~--d-----g~v~iwd~~~~~ 189 (350)
.. ..........++.+..+ + ++.|+. + ..+.+||+.+.+
T Consensus 531 ~g-----~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 531 KD-----EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SS-----GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CC-----CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 00 01111112233444543 3 666665 2 458899988765
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.70 E-value=2.6 Score=41.93 Aligned_cols=114 Identities=11% Similarity=0.204 Sum_probs=71.3
Q ss_pred ccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccc
Q 045370 61 LEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLL 139 (350)
Q Consensus 61 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 139 (350)
....++|.+++-+. +. |++| ....|++|++...+.+.. ..+-..+..+.....++++++|+.-..|.++..+..
T Consensus 882 ~~v~g~v~al~~~~--g~-Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~- 956 (1158)
T 3ei3_A 882 KEVKGAVYSMVEFN--GK-LLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPM- 956 (1158)
T ss_dssp EEESSCEEEEEEET--TE-EEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETT-
T ss_pred EEcCCcCEEEeeeC--CE-EEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcC-
Confidence 34578899987653 44 4443 358899999987654442 222222433344346789999988777777654321
Q ss_pred cccccccccccceee--eccCCceEEEEecCCe-EEEEeCCCcEEEEECCC
Q 045370 140 LEDHFIVGEDQHSVL--KGHNGSITALAFSASH-LISASEDKTVCLWDVTR 187 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~ 187 (350)
...+..+ ..+...++++.+-.+. ++.+..+|.|.+.....
T Consensus 957 --------~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 957 --------EGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp --------TTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred --------CCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 1111111 2345678888886555 88899999999987653
No 325
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.60 E-value=1.3 Score=39.82 Aligned_cols=130 Identities=9% Similarity=-0.011 Sum_probs=80.8
Q ss_pred EEEEeCCC----C-ceEEEEecCCceeEEEEcCCCcEEEEEc-cCCeEEEEeCCccccc--cccccccccceeeeccCCc
Q 045370 89 CKVWDLGS----G-ILIQTQVYPQAVTAIAFHPGEQLLFAGS-IDGRIFVSPLKFLLLE--DHFIVGEDQHSVLKGHNGS 160 (350)
Q Consensus 89 v~vwd~~~----~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~ 160 (350)
|.+-|.+. + .....++.+.....+.++|||+++++++ .+.++.++|++..... .........+.....-.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 55666654 2 3445566777788999999999988766 4789999999853221 0000000001111112345
Q ss_pred eEEEEecCCe--EEEEeCCCcEEEEECCCc----------eEEEEeccCCCceeEE-----EEEccCCeEEeeec
Q 045370 161 ITALAFSASH--LISASEDKTVCLWDVTRR----------VSIRRFNHKKGVVTNL-----VVIRQSSLLSEVSN 218 (350)
Q Consensus 161 i~~~~~~~~~--l~s~~~dg~v~iwd~~~~----------~~~~~~~~~~~~v~~l-----~~~~~~~~l~~~~~ 218 (350)
....+|.++| +.|---|..|.-|++... ..+..+..|..+-.-. .-.|+|++|++...
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 6778999998 445558999999998753 4666666554432211 12578999997654
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.54 E-value=2.7 Score=34.69 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=54.0
Q ss_pred CCcEEEEEeCC-------CcEEEEeCCCCceEEEEecCCc--eeEEEEcCCCcEEEEEcc------CCeEEEEeCCcccc
Q 045370 76 GTTFFVSSSLD-------ATCKVWDLGSGILIQTQVYPQA--VTAIAFHPGEQLLFAGSI------DGRIFVSPLKFLLL 140 (350)
Q Consensus 76 ~~~~l~s~~~d-------~~v~vwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~ 140 (350)
++.+++.|+.+ ..+.+||+.+.+....-..+.+ -.+++. .++..++.|+. -..+.+||+.+...
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 55677777764 2478889888765544221111 122222 36666666654 24588999876543
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCce
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRV 189 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~ 189 (350)
.... .+....... +++...+. ++.|+.+ ..+.+||+.+.+
T Consensus 188 ~~~~--------~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 188 KDLA--------PMKTPRSMF-GVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEC--------CCSSCCBSC-EEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EECC--------CCCCCcccc-eEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2210 111111111 22233344 5566543 357789987754
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.42 E-value=3.1 Score=35.04 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=80.6
Q ss_pred eccccCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE--E-----ecCCceeEEEEcCC---CcEEEEE---cc
Q 045370 60 SLEHKSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT--Q-----VYPQAVTAIAFHPG---EQLLFAG---SI 126 (350)
Q Consensus 60 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~--~-----~~~~~v~~~~~~~~---~~~l~~~---~~ 126 (350)
+...-...+.++|.+ ++.++++--..|.|++++..++..... + ........|+++|+ +..|++. ..
T Consensus 27 va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 27 VATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred eecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 334456678898866 667666654489999998766654322 1 12346789999995 3444443 23
Q ss_pred CCeEEEEeCCcccccccccccccc-ceeee-ccCCceEEEEecCCe-EEEE-eC-------------CCcEEEEECCCc-
Q 045370 127 DGRIFVSPLKFLLLEDHFIVGEDQ-HSVLK-GHNGSITALAFSASH-LISA-SE-------------DKTVCLWDVTRR- 188 (350)
Q Consensus 127 dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~-l~s~-~~-------------dg~v~iwd~~~~- 188 (350)
++.|.-|.+.............+. +..+. ........|.|.|++ |+.+ +. .|.|.-.+....
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 456666665532110000000010 01111 111234579999998 3333 21 244444454321
Q ss_pred --------eEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 189 --------VSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 189 --------~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
..+... +|. ....++|+|+|.+.++-
T Consensus 186 p~~nPf~~~~i~a~-G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 186 APGNPFPGSPVYSY-GHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CTTCSSTTCCEEEB-CCS-BCCEEEECTTCCEEEEE
T ss_pred cCCCCCCCCeEEee-CCC-CcceEEECCCCCEEEEe
Confidence 112221 333 35789999998877644
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.27 E-value=4 Score=35.88 Aligned_cols=100 Identities=6% Similarity=0.134 Sum_probs=54.1
Q ss_pred CeecCCCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeee------ccccCCceEEEEee
Q 045370 1 MVFSDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYS------LEHKSSVTGLLTIS 74 (350)
Q Consensus 1 i~~s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~ 74 (350)
|+|.|||+++++-...+.|++++...+. ...+..+ .........|++.|
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~-------------------------~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGS-------------------------VKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCC-------------------------EEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCc-------------------------EeEEecCCccccccCCCCceeEEEECC
Confidence 5789999977765444568887654110 0001111 01245677898876
Q ss_pred C---CCcEEEEEeC------------CCcEEEEeCCCC--c-----eEEE-Ee--cCCceeEEEEcCCCcEEEEEc
Q 045370 75 G---GTTFFVSSSL------------DATCKVWDLGSG--I-----LIQT-QV--YPQAVTAIAFHPGEQLLFAGS 125 (350)
Q Consensus 75 ~---~~~~l~s~~~------------d~~v~vwd~~~~--~-----~~~~-~~--~~~~v~~~~~~~~~~~l~~~~ 125 (350)
. ++.+.++-+. ...|.-+++..+ . .+.. +. .......|+|.|+|.++++.+
T Consensus 87 df~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 87 DFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 4 4554444432 234555554322 1 1111 22 123478999999998777654
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.27 E-value=2.5 Score=42.65 Aligned_cols=196 Identities=8% Similarity=0.084 Sum_probs=92.1
Q ss_pred cCCCCEEEEEeCCCcEEEEeCccccccccccccccc-------------cccccEEEeeccccccceeeeccc----cCC
Q 045370 4 SDDGFLLISGSDDGMICVWSMTRLLKQTSELMHHSD-------------QLDQRLIEMELRSLRSLLHYSLEH----KSS 66 (350)
Q Consensus 4 s~dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~h----~~~ 66 (350)
+|..+.+|--. ..++.|||+++..+.........- -....+++++......+...+..| ...
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~Q 152 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQ 152 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCe
Confidence 56666665543 577888888754333222221100 012344444433222333333333 344
Q ss_pred ceEEEEeeCCCcEEEEEe-------CCCcEEEEeCCCCceEEEEecCCceeEEEEc--CC-CcEEEEEcc---CCeEEEE
Q 045370 67 VTGLLTISGGTTFFVSSS-------LDATCKVWDLGSGILIQTQVYPQAVTAIAFH--PG-EQLLFAGSI---DGRIFVS 133 (350)
Q Consensus 67 v~~~~~~~~~~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~~~---dg~i~i~ 133 (350)
|..-..++ +..+++..| -.|.+.+|..+.+.....-+|......+... +. ...++.+.. .+.+++.
T Consensus 153 IinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~ 231 (1630)
T 1xi4_A 153 IINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (1630)
T ss_pred eEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEE
Confidence 55544444 344444322 3477888887755432222232222222221 11 112222211 2688998
Q ss_pred eCCccccccccccccccceeee---ccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCcee
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLK---GHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVT 202 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 202 (350)
++........ ....+.+..+. ....-..++..++.. +..-+.-|.|++||+.++.++..-.....+|.
T Consensus 232 Ei~~~~~~~~-~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF 304 (1630)
T 1xi4_A 232 EVGTPPTGNQ-PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (1630)
T ss_pred ecCCCccCCC-CCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceE
Confidence 8865311100 00001111111 123445567777765 66777889999999999988765443333333
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.15 E-value=4.2 Score=35.75 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=37.4
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe---------cCCceeEEEEcCC---CcEEEEEc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV---------YPQAVTAIAFHPG---EQLLFAGS 125 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~---------~~~~v~~~~~~~~---~~~l~~~~ 125 (350)
-...+.++|.+ ++.++++-...+.|.+++..++....... ....+..|+|+|+ +..|+++.
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 45667898866 66766654433468888876565433221 1345679999995 55555443
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.96 E-value=3.2 Score=33.93 Aligned_cols=63 Identities=5% Similarity=-0.006 Sum_probs=38.9
Q ss_pred CCcEEEEEeCC----CcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccC------CeEEEEeCCccc
Q 045370 76 GTTFFVSSSLD----ATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSID------GRIFVSPLKFLL 139 (350)
Q Consensus 76 ~~~~l~s~~~d----~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~ 139 (350)
++.+++.|+.+ ..+.+||+.+++....-. ....-.+++.. ++..++.|+.+ ..+.+||..+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 55677777765 568889998886554422 22222222222 66677777654 468889887654
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.90 E-value=3.4 Score=34.02 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=55.5
Q ss_pred CCcEEEEEeCC--------CcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEcc-C-----CeEEEEeCCccc
Q 045370 76 GTTFFVSSSLD--------ATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSI-D-----GRIFVSPLKFLL 139 (350)
Q Consensus 76 ~~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~ 139 (350)
++.+++.|+.+ ..+.+||+.+++....-. ....-.+++. .++..++.|+. + ..+.+||..+..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 55677777743 458899998876443322 2222223333 35666677765 2 468889887654
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe-EEEEeCCC-----cEEEEECCCce
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDK-----TVCLWDVTRRV 189 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg-----~v~iwd~~~~~ 189 (350)
..... .+........++. ..+. ++.|+.++ .+.+||+.+.+
T Consensus 177 W~~~~--------~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 177 WKELA--------PMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEECC--------CCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEECC--------CCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 32211 1111111112222 3334 66666544 58899998764
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.71 E-value=3.6 Score=33.78 Aligned_cols=104 Identities=6% Similarity=-0.013 Sum_probs=54.5
Q ss_pred CCcEEEEEeC----C-----CcEEEEeCCCCceEEEE--ecCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccc
Q 045370 76 GTTFFVSSSL----D-----ATCKVWDLGSGILIQTQ--VYPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLL 139 (350)
Q Consensus 76 ~~~~l~s~~~----d-----~~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 139 (350)
++.+++.|+. + ..+.+||+.+.+....- .....-.+++.. ++..++.|+.+ ..+.+||..+..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 5566777765 2 46888999887654432 111112222222 56666776643 468888887644
Q ss_pred cccccccccccceeeeccCCceEEEEecCCe-EEEEeCC-----CcEEEEECCCce
Q 045370 140 LEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASED-----KTVCLWDVTRRV 189 (350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d-----g~v~iwd~~~~~ 189 (350)
..... .+........++.+ .+. ++.|+.+ ..+.+||+.+.+
T Consensus 149 W~~~~--------~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 149 WHLVA--------PMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp EEECC--------CCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EeECC--------CCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 32211 11111111122223 334 6666654 468899988764
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.40 E-value=4 Score=33.62 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=36.6
Q ss_pred CCcEEEEEeC------CCcEEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEEccC-----CeEEEEeCCccc
Q 045370 76 GTTFFVSSSL------DATCKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAGSID-----GRIFVSPLKFLL 139 (350)
Q Consensus 76 ~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 139 (350)
++.+++.|+. -..+.+||+.+.+....-. ....-.+++.. ++..++.|+.+ ..+.+||+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5567777764 2358999999876554422 22222233332 56666776543 357788877543
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.35 E-value=4.1 Score=33.58 Aligned_cols=110 Identities=5% Similarity=-0.011 Sum_probs=58.5
Q ss_pred CcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEc--cC--CeEEEEeCCccccccccccccccceeeeccCCceE
Q 045370 87 ATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGS--ID--GRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSIT 162 (350)
Q Consensus 87 ~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (350)
..|+..++..++...... .. +..|++++..|+-.. .+ ..|+..++.. .....+..+..
T Consensus 88 ~~Iy~i~~dg~~~~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-----------s~~~~lt~~~~--- 149 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-----------EEKKKIKNHYL--- 149 (302)
T ss_dssp EEEEEEETTSCCCEEEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-----------CCCEEEESSCC---
T ss_pred CeEEEEeCCCCcceEeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-----------CCeEEEeCCCc---
Confidence 357777777665333222 22 236777888877665 33 4455445442 11223333322
Q ss_pred EEEecCCe--EE-EEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEeeecC
Q 045370 163 ALAFSASH--LI-SASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 163 ~~~~~~~~--l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
..+++++ |+ +......|+..++..+.....+. +... ..++|++.+|+-....
T Consensus 150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp -CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGG
T ss_pred -eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcC
Confidence 3345555 44 43346788888987765443333 2222 3467999888766544
No 336
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.97 E-value=11 Score=37.64 Aligned_cols=133 Identities=7% Similarity=0.023 Sum_probs=77.6
Q ss_pred cEEEEEeCCCcEEEEeCCCCceEEEEecC--CceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeee
Q 045370 78 TFFVSSSLDATCKVWDLGSGILIQTQVYP--QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK 155 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 155 (350)
..++-... ..|++.+...+..+..+..+ ..|...+.+ +..++.++ ++.+.++++..+.... ... .
T Consensus 484 ~~ivQVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~--------~~~-~ 550 (1158)
T 3ei3_A 484 QQLIQITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQ--------ISH-T 550 (1158)
T ss_dssp TEEEEEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEE--------EEE-E
T ss_pred CeEEEEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceee--------ecc-c
Confidence 34555543 34778887665556555433 357777665 34666664 6788888776432111 011 1
Q ss_pred ccCCceEEEEecCC--------eEEEEeC-CCcEEEEECCCceEEEEecc-CCCceeEEEEEc--cCCeEEeeecCcccc
Q 045370 156 GHNGSITALAFSAS--------HLISASE-DKTVCLWDVTRRVSIRRFNH-KKGVVTNLVVIR--QSSLLSEVSNCQRKL 223 (350)
Q Consensus 156 ~~~~~i~~~~~~~~--------~l~s~~~-dg~v~iwd~~~~~~~~~~~~-~~~~v~~l~~~~--~~~~l~~~~~~~~~~ 223 (350)
.-...|.|+++.|. .++.|.. |++|+|+++.+.+.+....- ......++.+.. ...+|..|-.++.++
T Consensus 551 ~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 551 EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 22457999998752 1888886 99999999998776654331 122445554442 224566565555443
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.05 E-value=2.6 Score=37.91 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=62.9
Q ss_pred CeecCCCCEEEEEeC-CCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcE
Q 045370 1 MVFSDDGFLLISGSD-DGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTF 79 (350)
Q Consensus 1 i~~s~dg~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 79 (350)
+.++|||++++.++. +.++.|+|+++....... .+. .....+.....-.......+|.+ ++..
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~----------k~~-----~~~~~~~ae~e~GlGPlHt~Fd~-~G~a 391 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAG----------KLA-----DPRDVIVGEPELGLGPLHTTFDG-RGNA 391 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTT----------CCS-----CGGGGEEECCBCCSCEEEEEECS-SSEE
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhc----------ccc-----CcccceEeeccCCCcccEEEECC-CCce
Confidence 357999999877664 889999999842211000 000 00111111112234445566755 5565
Q ss_pred EEEEeCCCcEEEEeCCCC----------ceEEEEecCCceeEEEE------cCCCcEEEEEc
Q 045370 80 FVSSSLDATCKVWDLGSG----------ILIQTQVYPQAVTAIAF------HPGEQLLFAGS 125 (350)
Q Consensus 80 l~s~~~d~~v~vwd~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~l~~~~ 125 (350)
..|-.-|..|..|++... ..+..+.....+-.+.. .|+|++|++..
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 666778999999998753 34444553334444443 56888888764
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.69 E-value=11 Score=35.44 Aligned_cols=137 Identities=10% Similarity=0.158 Sum_probs=81.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEE-ec-----CCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQ-VY-----PQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
..|.++...+ ++. +..|+.+ -|..++..+++..... .. ...|.++..++++..|..|+. +-+..+|..+.
T Consensus 146 ~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTK-DNQ-IYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECT-TCC-EEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcC-CCC-EEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 3466665543 344 3445544 4778888776543321 11 123788888887777777764 45778887643
Q ss_pred ccccccccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCCceEEEEec-------cCCCceeEEEEEccC
Q 045370 139 LLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTRRVSIRRFN-------HKKGVVTNLVVIRQS 210 (350)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~-------~~~~~v~~l~~~~~~ 210 (350)
..... ..+ ....|.++...+++ |..|+.+ -+.++|..+++...... .....|.++....+|
T Consensus 222 ~~~~~--------~~l--~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g 290 (758)
T 3ott_A 222 QIKQT--------EAF--HNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEH 290 (758)
T ss_dssp EEEEE--------EEE--EEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTC
T ss_pred eEEec--------cCC--CCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCC
Confidence 32110 011 12458888888888 7777754 58889887654322111 112358888887777
Q ss_pred CeEEee
Q 045370 211 SLLSEV 216 (350)
Q Consensus 211 ~~l~~~ 216 (350)
.+-+.+
T Consensus 291 ~lWiGT 296 (758)
T 3ott_A 291 NIWLGT 296 (758)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 766633
No 339
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.22 E-value=7.2 Score=32.50 Aligned_cols=158 Identities=9% Similarity=0.037 Sum_probs=85.6
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeC
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 85 (350)
+..+++..+.+|.|+--.+....... ..+.....+.. .+.+..+.... ....++..+.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~--------------------r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~ 165 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNR--------------------SGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSA 165 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCC--------------------SSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEET
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccc--------------------cCceEEEEECC-CCEEEEEEEec-CCCEEEEEEC
Confidence 46788999999999988776211000 00111122223 45566655544 3455777778
Q ss_pred CCcEEEEeCC--C---------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceee
Q 045370 86 DATCKVWDLG--S---------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVL 154 (350)
Q Consensus 86 d~~v~vwd~~--~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 154 (350)
.|.+..+... . |.....+.....|.++...+.+.+++.++..|.++.-.+........-. .......+
T Consensus 166 ~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~-~G~~~~~l 244 (327)
T 3uc1_A 166 NGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG-KGVLTVMY 244 (327)
T ss_dssp TSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS-CCEESSCC
T ss_pred CCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC-CcEEEEEe
Confidence 8888777665 2 1111123345567777666667789999999999988776543321100 01111122
Q ss_pred eccCCceEEEEe-cCCe-EEEEeCCCcEEEEECC
Q 045370 155 KGHNGSITALAF-SASH-LISASEDKTVCLWDVT 186 (350)
Q Consensus 155 ~~~~~~i~~~~~-~~~~-l~s~~~dg~v~iwd~~ 186 (350)
....+.+..+.. .++. ++..+.+|.+.-++..
T Consensus 245 ~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 245 DRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 221233444333 3333 6666777777666654
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.06 E-value=0.71 Score=38.80 Aligned_cols=110 Identities=9% Similarity=0.057 Sum_probs=62.9
Q ss_pred CEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEe--eCCCcEEEEE-e
Q 045370 8 FLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTI--SGGTTFFVSS-S 84 (350)
Q Consensus 8 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~s~-~ 84 (350)
.+++.++.||.|.-.|..++.. .|..... ...++...... +.++..++.. +
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~---------------~W~~~~~-----------~~~p~~~~~~~~~~~~~~~~vv~p~ 64 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI---------------IWSIEPE-----------NFQPLIEIQEPSRLETYETLIIEPF 64 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE---------------EEEECGG-----------GSCCSEECCCSCTTTSSEEEEECCS
T ss_pred CEEEEEeCCCeEEEEECCCCcE---------------EEEecCC-----------ccCCcEEecCCccccCCcEEEEEEC
Confidence 4788899999999999874321 1111111 00111111000 1123333333 6
Q ss_pred CCCcEEEEeCCCCceEEEEecCCceeE--EEEc-----------CCCcEEEEEccCCeEEEEeCCccccccc
Q 045370 85 LDATCKVWDLGSGILIQTQVYPQAVTA--IAFH-----------PGEQLLFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 85 ~d~~v~vwd~~~~~~~~~~~~~~~v~~--~~~~-----------~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
.||.|..++..+|.....+..+..+.. +... ..+..+++|+.+|.+...|+.+++....
T Consensus 65 ~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 65 GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 899999999988865544442221110 1111 1467889999999999999998776543
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.22 E-value=15 Score=34.62 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=78.2
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe-----cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccc
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV-----YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLL 140 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 140 (350)
.|.++.. . ++. +..++.+ -|..+|..+++...... ....|.++..++++.+.+ |+.+ -+..++......
T Consensus 104 ~i~~i~~-~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~ 177 (758)
T 3ott_A 104 DVRTMAL-Q-GDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF 177 (758)
T ss_dssp CEEEEEE-E-TTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE
T ss_pred eEEEEEe-c-CCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce
Confidence 4666543 3 443 5555655 58889988766543311 134578888877776554 4444 477787664332
Q ss_pred ccccccccccceeeeccCCceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 141 EDHFIVGEDQHSVLKGHNGSITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
.... ... ........|.++...+++ |..|.. +-|..+|..+++...........|.++...++|.+.+.+
T Consensus 178 ~~~~-~~~----~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 178 EGIP-LPV----HSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EEEC-CCC----CTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred EEec-CCC----ccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe
Confidence 1100 000 000012358888887653 666664 468889988765432211123457888888888877744
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.06 E-value=13 Score=32.83 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=60.1
Q ss_pred CceeEEEEcCCCc-EEEEEccCCeEEEEeCCccccccccccccccceeee----ccCCceEEEEecCC----e--EEEEe
Q 045370 107 QAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLK----GHNGSITALAFSAS----H--LISAS 175 (350)
Q Consensus 107 ~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~----~--l~s~~ 175 (350)
.....|+|.|++. .++++...|.|++++........... ....+ ... ........|+++|+ + +++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~-~~~~~-~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYL-DIHKL-VQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSE-ECTTT-BCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeec-CCcce-eccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 4567899999996 56666778999999753211110000 00000 111 12467889999997 2 23222
Q ss_pred C--C----------CcEEEEECCC----------ceEEEEec--cCCCceeEEEEEccCCeEEeeec
Q 045370 176 E--D----------KTVCLWDVTR----------RVSIRRFN--HKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 176 ~--d----------g~v~iwd~~~----------~~~~~~~~--~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
. + ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1 1343354431 23444443 12234688999999987775554
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.95 E-value=12 Score=36.50 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=30.5
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV 104 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 104 (350)
.+.+++.. ++..++++-+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~-~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEE-TTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeec-CCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45566553 466789999999999999999999988753
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.82 E-value=14 Score=30.76 Aligned_cols=51 Identities=6% Similarity=0.124 Sum_probs=29.2
Q ss_pred CCcEEEEEeC-C---------CcEEEEeCCCCceEEEEe---cCCceeEEEEcCCCcEEEEEccC
Q 045370 76 GTTFFVSSSL-D---------ATCKVWDLGSGILIQTQV---YPQAVTAIAFHPGEQLLFAGSID 127 (350)
Q Consensus 76 ~~~~l~s~~~-d---------~~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d 127 (350)
++.+++.|+. + ..+.+||+.+.+...... ....-.+++. .++..++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 4567777765 2 468899998876544322 1111222222 467777777754
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.37 E-value=14 Score=30.22 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=53.6
Q ss_pred CCCcEEEEEeC----CC-------cEEEEeCCCCceEEEEecCC--ceeEEEEcCCCcEEEEEccC--------CeEEEE
Q 045370 75 GGTTFFVSSSL----DA-------TCKVWDLGSGILIQTQVYPQ--AVTAIAFHPGEQLLFAGSID--------GRIFVS 133 (350)
Q Consensus 75 ~~~~~l~s~~~----d~-------~v~vwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--------g~i~i~ 133 (350)
.++.+++.|+. ++ .+.+||..+++....-..+. .-.+++.. ++..++.|+.+ ..+.+|
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEE
Confidence 35677777774 11 27788888876543321111 11222222 56666666632 468888
Q ss_pred eCCccccccccccccccceeeeccCCceEEEEecCCe-EEEEeC-C-----CcEEEEECCCce
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISASE-D-----KTVCLWDVTRRV 189 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~-d-----g~v~iwd~~~~~ 189 (350)
|..+...... . .+....... +++...+. ++.|+. + ..+.+||+.+.+
T Consensus 123 d~~~~~W~~~---~-----~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 123 DRLSFKWGES---D-----PLPYVVYGH-TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp ETTTTEEEEC---C-----CCSSCCBSC-EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCCCCcEeEC---C-----CCCCcccce-eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 8876543211 0 111111111 22233344 666665 2 468999998754
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=84.47 E-value=17 Score=30.52 Aligned_cols=111 Identities=11% Similarity=0.022 Sum_probs=58.5
Q ss_pred ceeEEEEcCCCcEEEEEc-cCCeEEEEeCCccccccc-cc-------cccccceeeeccCCceEEEEecCCe-EEEEeCC
Q 045370 108 AVTAIAFHPGEQLLFAGS-IDGRIFVSPLKFLLLEDH-FI-------VGEDQHSVLKGHNGSITALAFSASH-LISASED 177 (350)
Q Consensus 108 ~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~-~~-------~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~d 177 (350)
....++|+|++.++++=. .|+.-.+.-+..+..... .. ....++..+..+......++|.... ++..-..
T Consensus 203 Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~ 282 (347)
T 3das_A 203 NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRG 282 (347)
T ss_dssp BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTT
T ss_pred CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccC
Confidence 456899999876555432 233222222222221110 00 0112233333333466777877655 4444455
Q ss_pred CcEEEEECCCceE----EEEeccCCCceeEEEEEccCCeEEeeec
Q 045370 178 KTVCLWDVTRRVS----IRRFNHKKGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 178 g~v~iwd~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 218 (350)
+.|....+..... ...+....+.+..|+..|||.++++.++
T Consensus 283 ~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~ 327 (347)
T 3das_A 283 ERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSN 327 (347)
T ss_dssp CSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECT
T ss_pred CEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcC
Confidence 6676666655432 1223334567999999999998876654
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=83.13 E-value=19 Score=30.07 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.9
Q ss_pred CceeEEEEcCCCcEEEEEccCCeEEEEeCCccc
Q 045370 107 QAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLL 139 (350)
Q Consensus 107 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 139 (350)
+-.-++..++....++..+.-|.|++||+.++.
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 446678888888899999999999999999653
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.17 E-value=17 Score=31.95 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=18.9
Q ss_pred CeecCCCC-EEEEEeCCCcEEEEeCc
Q 045370 1 MVFSDDGF-LLISGSDDGMICVWSMT 25 (350)
Q Consensus 1 i~~s~dg~-~l~sg~~dg~i~vwd~~ 25 (350)
|+|.|||. .|+.+...|.|++++..
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTT
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCC
Confidence 57899996 45556678999999754
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.07 E-value=22 Score=29.88 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=37.2
Q ss_pred cCCceeEEEEcC-------CCcEEEEEccCCeEEEEeCCccccccccccccccceeeeccCCceEEEEecCCe-EEEEe
Q 045370 105 YPQAVTAIAFHP-------GEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSASH-LISAS 175 (350)
Q Consensus 105 ~~~~v~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~ 175 (350)
+...+..+.|.. ++.++++.-..+.|...++....... .. ..+......+..+++.|++ |+.++
T Consensus 269 ~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~-----~~--~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 269 DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTE-----DG--RILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEE-----EE--EESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEee-----eE--EcccCCCCceeEEEECCCCcEEEEE
Confidence 334566777764 46676666667788777776322110 00 0122234578889999988 55543
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=80.90 E-value=21 Score=28.88 Aligned_cols=158 Identities=12% Similarity=0.043 Sum_probs=88.6
Q ss_pred ccCCceEEEEeeC-CCcEEEEEeCCCcEEEEeCCCCc------eEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeC
Q 045370 63 HKSSVTGLLTISG-GTTFFVSSSLDATCKVWDLGSGI------LIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPL 135 (350)
Q Consensus 63 h~~~v~~~~~~~~-~~~~l~s~~~d~~v~vwd~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 135 (350)
....|..+.. .. +..+++..+.+|.++-..+..-. ....+...+.+..+........++..+..|.+..++.
T Consensus 66 ~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 66 REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 4566776644 32 34678899999999988865421 1112344566776666666678888888999988876
Q ss_pred CccccccccccccccceeeeccCCceEEEE-ecCCe-EEEEeCCCcEEEEECCC-------ceEEEEeccCCCceeEEEE
Q 045370 136 KFLLLEDHFIVGEDQHSVLKGHNGSITALA-FSASH-LISASEDKTVCLWDVTR-------RVSIRRFNHKKGVVTNLVV 206 (350)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~-l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~l~~ 206 (350)
..-...... ........+... ..|..+. ..++. ++..+..|.++...+.. ++-+..+. ..+.+..+..
T Consensus 145 ~eip~~gR~-a~Gv~~i~L~~~-d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~ 221 (276)
T 3no0_A 145 REVPPSTPG-ARGVQGIKLEKN-DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIP 221 (276)
T ss_dssp GGSCBCCTT-CCCEECCCCCTT-CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEE
T ss_pred hhCCCcCCC-CCCEEEEccCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEE
Confidence 543221110 011111123222 4455554 34443 88888999988887642 22222332 2344555444
Q ss_pred EccCCeEEeeecCccccc
Q 045370 207 IRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 207 ~~~~~~l~~~~~~~~~~~ 224 (350)
......++..+..++.++
T Consensus 222 ~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 222 IKEEVELLITTKNGKAFY 239 (276)
T ss_dssp ESSEEEEEEEETTSCEEE
T ss_pred eCCCCEEEEEcCCCeEEE
Confidence 333344444666665554
No 351
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=79.82 E-value=31 Score=30.21 Aligned_cols=108 Identities=13% Similarity=0.085 Sum_probs=64.8
Q ss_pred cCCCCEEEEEe-------CCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeC-
Q 045370 4 SDDGFLLISGS-------DDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISG- 75 (350)
Q Consensus 4 s~dg~~l~sg~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 75 (350)
++|.++++..| -.|.+.+|+.+ ...-..+.+|...-..+.....
T Consensus 159 d~~~kW~~l~GI~~~~~~v~G~mQLYS~e----------------------------r~~sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 159 DAKQKWLLLTGISAQQNRVVGAMQLYSVD----------------------------RKVSQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp CTTSSEEEEEEEEEETTEEEEEEEEEEST----------------------------TCCEEEECCSEEEEEEEECTTCS
T ss_pred CCCCCeEEEEeecccCCcccceEEEeecc----------------------------ccccchheeeeeeeEEEecCCCC
Confidence 56777766433 24678888887 3444455566554443332110
Q ss_pred -CCcEEEEEeCC---CcEEEEeCCCC---c-----eEEE--Ee---cCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 76 -GTTFFVSSSLD---ATCKVWDLGSG---I-----LIQT--QV---YPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 76 -~~~~l~s~~~d---~~v~vwd~~~~---~-----~~~~--~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
...+++.+... +.+++.++... . .... ++ ..+-.-++..++....++..+.-|.|++||+.++
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc
Confidence 01234444332 68888888543 1 1111 11 1344668888988889999999999999999965
Q ss_pred c
Q 045370 139 L 139 (350)
Q Consensus 139 ~ 139 (350)
.
T Consensus 291 t 291 (494)
T 1bpo_A 291 T 291 (494)
T ss_dssp C
T ss_pred e
Confidence 3
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.70 E-value=32 Score=35.17 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=27.9
Q ss_pred ceeEEEEcCCCcEEEEEccCCeEEEEeCCccccc
Q 045370 108 AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLE 141 (350)
Q Consensus 108 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 141 (350)
-..++..++....++..+.-|.+++||+.++...
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 4567778888888999999999999999976543
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.15 E-value=56 Score=31.79 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=29.5
Q ss_pred ceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccc
Q 045370 108 AVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLED 142 (350)
Q Consensus 108 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 142 (350)
.+.+++..++..++++.+.|+.+++|++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46677777888999999999999999999876544
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.41 E-value=8 Score=38.52 Aligned_cols=38 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEe
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQV 104 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 104 (350)
.+.+++. ..+..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~-~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEE-ETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeec-cCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444444 3466789999999999999999999988854
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=75.68 E-value=33 Score=28.45 Aligned_cols=161 Identities=11% Similarity=0.103 Sum_probs=89.9
Q ss_pred ccCCceEEEEeeC--CCcEEEEEeCCCcEEEEeCCCCc-------eEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEE
Q 045370 63 HKSSVTGLLTISG--GTTFFVSSSLDATCKVWDLGSGI-------LIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVS 133 (350)
Q Consensus 63 h~~~v~~~~~~~~--~~~~l~s~~~d~~v~vwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 133 (350)
....|.++..... +..+++..+.+|.++--.+..-. ....+...+.+..+........++..+..|.+..+
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 3466766655442 45789999999999988765421 11123345566666666666778888889999888
Q ss_pred eCC--ccccccccccccccceeeeccCCceEEEEec-CCe-EEEEeCCCcEEEEECCCc-------eEEE--EeccCCCc
Q 045370 134 PLK--FLLLEDHFIVGEDQHSVLKGHNGSITALAFS-ASH-LISASEDKTVCLWDVTRR-------VSIR--RFNHKKGV 200 (350)
Q Consensus 134 d~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-l~s~~~dg~v~iwd~~~~-------~~~~--~~~~~~~~ 200 (350)
... .-...... ........+.. ...|.++... ++. ++..+..|.++.-.+... +-+. .+....+.
T Consensus 173 ~~~~~eip~~gr~-a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~ 250 (327)
T 3uc1_A 173 SATDEALRPMGRA-TSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGR 250 (327)
T ss_dssp ECCTTTSCCCCTT-SBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCS
T ss_pred ECcccccCcCCcC-CCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCe
Confidence 776 32211110 01111122322 3456555544 443 888899999888775321 2122 22221334
Q ss_pred eeEEEEEccCCeEEeeecCcccccc
Q 045370 201 VTNLVVIRQSSLLSEVSNCQRKLKK 225 (350)
Q Consensus 201 v~~l~~~~~~~~l~~~~~~~~~~~~ 225 (350)
+..+....+...++..+..+..++.
T Consensus 251 lv~~~~~~~~~~i~l~T~~G~~ir~ 275 (327)
T 3uc1_A 251 LVGALIVDDDSELYAVTSGGGVIRT 275 (327)
T ss_dssp EEEEEEECTTCEEEEEEGGGCEEEE
T ss_pred EEEEEEeCCCccEEEEcCCCeEEEE
Confidence 5555444444455556666655544
No 356
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=73.72 E-value=34 Score=27.59 Aligned_cols=154 Identities=10% Similarity=0.082 Sum_probs=83.5
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeC
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 85 (350)
+..+++..+.+|.|+-..+.... . ...+.....+. -.+.+..+.... +...++..+.
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~-~--------------------~~~G~~~i~lk-egD~l~~~~~~~-~~~~ill~T~ 135 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFE-Y--------------------KAQGMPIIKLT-EGDEVVSIASSV-DETHILLFTK 135 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTT-T--------------------CSTTEECSCCC-TTCCEEEEEECC-SSCEEEEEET
T ss_pred CCCEEEEEeCCCEEEEEEHHHhh-h--------------------hcCCeEEEecC-CCCEEEEEEEeC-CCCEEEEEEC
Confidence 45688889999999988876211 0 00111111222 235555554443 3456777788
Q ss_pred CCcEEEEeCCC---------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccccccccccceeeec
Q 045370 86 DATCKVWDLGS---------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKG 156 (350)
Q Consensus 86 d~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 156 (350)
.|.+..+.... |.....+.....|..+...+++..++..+..|.++...+......... ..-+..+ .
T Consensus 136 ~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~---gkGv~~i-~ 211 (276)
T 3no0_A 136 KGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRG---VKGTEVS-G 211 (276)
T ss_dssp TSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTT---CCCEECC-C
T ss_pred CCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCC---CcceEEE-c
Confidence 88877776432 212112334456666665566778888999999998887654332211 1111112 1
Q ss_pred cCCceEEEEe-cCCe-EEEEeCCCcEEE--EECC
Q 045370 157 HNGSITALAF-SASH-LISASEDKTVCL--WDVT 186 (350)
Q Consensus 157 ~~~~i~~~~~-~~~~-l~s~~~dg~v~i--wd~~ 186 (350)
..+.+..+.. .++. ++..+.+|.+.. ++..
T Consensus 212 ~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 212 TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 2233444433 3333 666677777666 6554
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.81 E-value=22 Score=33.12 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=28.8
Q ss_pred ceEEEEecCCeEEEEeCCCcEEEEECCCceEEEEec
Q 045370 160 SITALAFSASHLISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 160 ~i~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
.|.++.+....+++-+.|.++|+|++++++++.+..
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 466666653349999999999999999999887764
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.64 E-value=22 Score=32.14 Aligned_cols=61 Identities=15% Similarity=0.004 Sum_probs=43.0
Q ss_pred CceEEEEecCCe-EEEEeCC-------------CcEEEEECCCceEEEEeccC-CCceeEEEEEccCCeEEeeecC
Q 045370 159 GSITALAFSASH-LISASED-------------KTVCLWDVTRRVSIRRFNHK-KGVVTNLVVIRQSSLLSEVSNC 219 (350)
Q Consensus 159 ~~i~~~~~~~~~-l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~~ 219 (350)
.....|.|.++| |..+... ..|..++..++++...+... ...++.++|+||++.|+++-..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 467789999999 5553321 25777788778765555433 3568999999999988876544
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.75 E-value=52 Score=32.79 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=28.1
Q ss_pred ceEEEEecCCe--EEEEeCCCcEEEEECCCceEEEEec
Q 045370 160 SITALAFSASH--LISASEDKTVCLWDVTRRVSIRRFN 195 (350)
Q Consensus 160 ~i~~~~~~~~~--l~s~~~dg~v~iwd~~~~~~~~~~~ 195 (350)
.+.+++..++. +++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34444555554 8899999999999999999988753
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=64.52 E-value=58 Score=26.73 Aligned_cols=110 Identities=12% Similarity=0.023 Sum_probs=66.5
Q ss_pred CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeCC
Q 045370 7 GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLD 86 (350)
Q Consensus 7 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 86 (350)
+.+|+..+..|.++.-.+...... +..+.....+.. .+.+..+.... +...++..+.+
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~--------------------r~~G~~~i~L~~-~d~lv~~~~~~-~~~~i~l~T~~ 171 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAV--------------------KSRGVIVIKLND-KDFVTSAEIVF-KDEKVICLSKK 171 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC------------------------CEECBCCCT-TCCEEEEEEEC-TTCEEEEEETT
T ss_pred CCEEEEEeCCCeEEEEEHHHhhcc--------------------CCCcEEEEecCC-CCEEEEEEEeC-CCCEEEEEeCC
Confidence 456777888888888877621000 001222223333 56677766554 34567788889
Q ss_pred CcEEEEeCCC---------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcc
Q 045370 87 ATCKVWDLGS---------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFL 138 (350)
Q Consensus 87 ~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 138 (350)
|.+..+.... |.....+...+.|..+..-.++..+++.+..|..+..++...
T Consensus 172 G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 172 GSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp SEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred CcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 9988887643 111112334455666655555667888888999999888654
No 361
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=63.14 E-value=61 Score=26.52 Aligned_cols=110 Identities=12% Similarity=0.112 Sum_probs=63.9
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeC
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 85 (350)
++.+++..+..|.++--.+...... ...+.....+..+ +.+..+.... +...++..+.
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~--------------------~r~G~~~i~l~~~-d~lv~~~~~~-~~~~i~l~T~ 165 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRL--------------------RTAGKVAIKLVDG-DELIGVDLTS-GEDEVMLFSA 165 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTC--------------------CTTCEESSCCCTT-CCEEEEEEEC-TTCEEEEEET
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhcc--------------------ccCCeEEEEECCC-CEEEEEEEeC-CCCEEEEECC
Confidence 4557888888898888776521000 0011122223333 6666665544 3345677778
Q ss_pred CCcEEEEeCCC---------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCc
Q 045370 86 DATCKVWDLGS---------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKF 137 (350)
Q Consensus 86 d~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 137 (350)
+|.+..+.... |.....+...+.|.++...+++..+++.+..|.++-.++..
T Consensus 166 ~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 166 EGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp TSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 88877776542 11111233445666665555566788889999999887754
No 362
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=62.70 E-value=65 Score=26.64 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=62.4
Q ss_pred CCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeCC
Q 045370 7 GFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSLD 86 (350)
Q Consensus 7 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 86 (350)
+.+|+.++.+|.++--.+....... +..+.....+.. .+.+..+.... +...++..+.+
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~-------------------r~~G~~ai~l~e-~d~lv~~~~~~-~~~~i~l~T~~ 164 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQR-------------------YSKPLTGINLKN-DDQVVDVHLTD-GMNELFLVTHN 164 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSC-------------------CSSCEECSCCCT-TCCEEEEEEEC-SCSEEEEEETT
T ss_pred CceEEEEeCCCeEEEeEHHHhhhcc-------------------ccCceEEEEeCC-CCEEEEEEEeC-CCCEEEEEeCC
Confidence 5578888899999888776211000 001111122222 25666655544 34457777888
Q ss_pred CcEEEEeCCC---------CceEEEEecCCceeEEEEcCCCc-EEEEEccCCeEEEEeCCc
Q 045370 87 ATCKVWDLGS---------GILIQTQVYPQAVTAIAFHPGEQ-LLFAGSIDGRIFVSPLKF 137 (350)
Q Consensus 87 ~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 137 (350)
|.+..+.... |.....+...+.|.++..-+++. .+++.+..|..+..++..
T Consensus 165 G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 165 GYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp SEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 8887777542 11111133445566665444444 788888899888877764
No 363
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=61.59 E-value=65 Score=26.27 Aligned_cols=62 Identities=6% Similarity=0.003 Sum_probs=33.9
Q ss_pred EeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEecCCceeEEEEcCCCcEEEEEccC--CeEEEEeCC
Q 045370 72 TISGGTTFFVSSSLDATCKVWDLGSGILIQTQVYPQAVTAIAFHPGEQLLFAGSID--GRIFVSPLK 136 (350)
Q Consensus 72 ~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~ 136 (350)
+.+.++.++.+......|.+.++..+.....+. +... ..++|++.+|+-...+ ..|..-++.
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSS
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECC
Confidence 334344444444346788888887665444332 2222 3466888877655433 356555555
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.32 E-value=17 Score=33.81 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=26.0
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCceEEEEec
Q 045370 76 GTTFFVSSSLDATCKVWDLGSGILIQTQVY 105 (350)
Q Consensus 76 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 105 (350)
+..++++-+.|+++|+|++.+++++.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 357899999999999999999998887553
No 365
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=58.45 E-value=1.3e+02 Score=28.59 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=38.2
Q ss_pred cCCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEEEec--------CCceeEEEEcCC-CcEEEEEc
Q 045370 64 KSSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQTQVY--------PQAVTAIAFHPG-EQLLFAGS 125 (350)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~--------~~~v~~~~~~~~-~~~l~~~~ 125 (350)
...|.+|+++|.+...++.+...+.|...+= .|+.-..+.. ...+.+++++|. ...++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 4689999998876677777877776655542 2332222221 236999999984 34555543
No 366
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=56.19 E-value=92 Score=26.34 Aligned_cols=112 Identities=9% Similarity=0.064 Sum_probs=61.8
Q ss_pred CCCEEEEEeCCCcEEEEeCccccccccccccccccccccEEEeeccccccceeeeccccCCceEEEEeeCCCcEEEEEeC
Q 045370 6 DGFLLISGSDDGMICVWSMTRLLKQTSELMHHSDQLDQRLIEMELRSLRSLLHYSLEHKSSVTGLLTISGGTTFFVSSSL 85 (350)
Q Consensus 6 dg~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 85 (350)
++.+|+.++..|.++--.+...... ...+.....+.. .+.+..+.... +...++..+.
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~--------------------~~~G~~ai~L~~-~d~lv~v~~~~-~~~~i~l~T~ 169 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFR--------------------LARGKIAINLDE-GDALVGVALTD-GDRDVLLFAS 169 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSC--------------------CTTCEESSCCCT-TCCEEEEEEEC-SCCEEEEEET
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcc--------------------cCCceEEEEeCC-CCEEEEEEEeC-CCceEEEEeC
Confidence 3458888999999998877621110 001111222222 45565555544 3445677777
Q ss_pred CCcEEEEeCCC---------CceEEEEecCCceeEEEEcC-----------------------------------CCcEE
Q 045370 86 DATCKVWDLGS---------GILIQTQVYPQAVTAIAFHP-----------------------------------GEQLL 121 (350)
Q Consensus 86 d~~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~-----------------------------------~~~~l 121 (350)
+|.+..+.... |.....+.....|.++...+ .+..+
T Consensus 170 ~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~i 249 (370)
T 3l6v_A 170 NGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYI 249 (370)
T ss_dssp TSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------------CEE
T ss_pred CCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceE
Confidence 88777776432 11111122334455444433 34578
Q ss_pred EEEccCCeEEEEeCCccc
Q 045370 122 FAGSIDGRIFVSPLKFLL 139 (350)
Q Consensus 122 ~~~~~dg~i~i~d~~~~~ 139 (350)
++.+..|..+...+....
T Consensus 250 l~vTe~G~gKrt~~~e~~ 267 (370)
T 3l6v_A 250 LTATENGYGKRTPLAEYP 267 (370)
T ss_dssp EEEETTSEEEEEEGGGSC
T ss_pred EEeeCCCCEEEEEHHHhc
Confidence 889999999888876543
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.07 E-value=39 Score=30.74 Aligned_cols=59 Identities=15% Similarity=0.009 Sum_probs=40.5
Q ss_pred ceEEEEecCCe-EEEEeCC-------------CcEEEEECCCceEEEEeccC-CCceeEEEEEccCCeEEeeec
Q 045370 160 SITALAFSASH-LISASED-------------KTVCLWDVTRRVSIRRFNHK-KGVVTNLVVIRQSSLLSEVSN 218 (350)
Q Consensus 160 ~i~~~~~~~~~-l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~~~~~ 218 (350)
..-.|+|+|.| |+.+-.. ..+.+.+..++++..-+..+ ...++.++|+||++.|++.-.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 45678999999 5544322 23556677777766555443 457999999999998876543
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=52.26 E-value=97 Score=25.39 Aligned_cols=121 Identities=10% Similarity=0.074 Sum_probs=71.0
Q ss_pred cCCceEEEEeeC--CCcEEEEEeCCCcEEEEeCCC-------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEe
Q 045370 64 KSSVTGLLTISG--GTTFFVSSSLDATCKVWDLGS-------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSP 134 (350)
Q Consensus 64 ~~~v~~~~~~~~--~~~~l~s~~~d~~v~vwd~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 134 (350)
.+.|.++...+. ...+++..+..|.++...+.. |.....+...+.+-.+.....+..++..+.+|.+..+.
T Consensus 99 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~ 178 (312)
T 1suu_A 99 QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFN 178 (312)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 345555544331 346688889999998887643 22222233455666666655566788888899999988
Q ss_pred CCccccccccccccccceeeeccCCceEEEEec-CCe-EEEEeCCCcEEEEECC
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS-ASH-LISASEDKTVCLWDVT 186 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-l~s~~~dg~v~iwd~~ 186 (350)
...-...... ........+.. ...|..+... ++. +++.+..|.....++.
T Consensus 179 ~~ev~~~gR~-~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 179 SRDVRLTNRG-TQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp GGGSCBCCTT-BCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred HHHccccCCC-CCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 7653222110 11112222332 3455555443 333 8888999998888874
No 369
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=49.22 E-value=1.2e+02 Score=25.54 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=34.7
Q ss_pred CceEEEEeeCC-CcEEEEEeCCCcEEEEeCCCCceEEEEe--------------------cCCceeEEEEcCC-CcEEEE
Q 045370 66 SVTGLLTISGG-TTFFVSSSLDATCKVWDLGSGILIQTQV--------------------YPQAVTAIAFHPG-EQLLFA 123 (350)
Q Consensus 66 ~v~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~--------------------~~~~v~~~~~~~~-~~~l~~ 123 (350)
.|.++++.+.+ ...+..+...+.|...+-. +..-..+. ....+.+|.++|. ...+++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 46778776543 4445555555554444322 22211111 1235788999883 455566
Q ss_pred EccCCeEEEE
Q 045370 124 GSIDGRIFVS 133 (350)
Q Consensus 124 ~~~dg~i~i~ 133 (350)
+..++.|...
T Consensus 195 g~~~ggl~~s 204 (394)
T 3b7f_A 195 GMSSGGVFES 204 (394)
T ss_dssp EEETBEEEEE
T ss_pred EECCCCEEEE
Confidence 6555555443
No 370
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.54 E-value=1.2e+02 Score=24.38 Aligned_cols=104 Identities=17% Similarity=0.115 Sum_probs=56.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCC-CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGS-GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
..|..++.- ..+.+.-. ||.|..|-... +++-........|..++.-.. +.+.-. ||.|+.|-.........
T Consensus 102 ~~v~~ia~G---~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~ 174 (282)
T 3qhy_B 102 SGVDAIAAG---AWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV 174 (282)
T ss_dssp SSEEEEEEE---TTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC
T ss_pred CCeEEEECc---CCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC
Confidence 356666552 22333344 89999997654 222111122345666655332 223333 78999887654221110
Q ss_pred cccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCC
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTR 187 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~ 187 (350)
+ ..-...|..++..... ++. .||.|+.|-...
T Consensus 175 ------p----~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 175 ------P----AEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp ------C----GGGGSSEEEEEECSSEEEEE--ETTEEEEEECCT
T ss_pred ------c----eecCCCeEEEEecCCEEEEE--ECCeEEEEECCC
Confidence 0 0112467778777666 544 599999997654
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=43.26 E-value=1.5e+02 Score=25.12 Aligned_cols=147 Identities=14% Similarity=0.149 Sum_probs=77.4
Q ss_pred CCceEEEEe-eC-----CCcEE-EEEeCCCcEEEEeCCCCceEEEEe-------------------cCCceeEEEEcCC-
Q 045370 65 SSVTGLLTI-SG-----GTTFF-VSSSLDATCKVWDLGSGILIQTQV-------------------YPQAVTAIAFHPG- 117 (350)
Q Consensus 65 ~~v~~~~~~-~~-----~~~~l-~s~~~d~~v~vwd~~~~~~~~~~~-------------------~~~~v~~~~~~~~- 117 (350)
..+..+++. .. +..++ ++=+..+.|.|+|+.+++..+... ....+..|+++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456777776 21 13333 343456789999999887655431 0236777888886
Q ss_pred ---CcEEEEEccCCeEEEEeCCccccccccccccccceeeeccC---CceEEEEec-CCe--EEEEeCCCcEEEEECCC-
Q 045370 118 ---EQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQHSVLKGHN---GSITALAFS-ASH--LISASEDKTVCLWDVTR- 187 (350)
Q Consensus 118 ---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~-~~~--l~s~~~dg~v~iwd~~~- 187 (350)
++.|+-....+ -++|.+.+..+..... ...+..+ +.. .....+++. .+| +++--+...|..|+..+
T Consensus 232 ~~~~~~LYf~plss-~~ly~V~T~~L~~~~~--~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 307 (381)
T 3q6k_A 232 SEGNRPAYYLAGSA-IKVYSVNTKELKQKGG--KLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKM 307 (381)
T ss_dssp TTSCCEEEEEESSC-SEEEEEEHHHHSSTTC--CCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSC
T ss_pred CCCCeEEEEEECCC-CcEEEEEHHHhhCcch--hhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCC
Confidence 56665554333 1333333322221111 1111122 222 334456675 566 55555678899999875
Q ss_pred c------eEEEEeccCCCceeEEEEEccCCeEEee
Q 045370 188 R------VSIRRFNHKKGVVTNLVVIRQSSLLSEV 216 (350)
Q Consensus 188 ~------~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 216 (350)
. ..+..=. .-..+..+.+.++|.+.+.+
T Consensus 308 ~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 308 PLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp SBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEE
T ss_pred ccccCceEEEEECC-CccccCeEEECCCCeEEEEE
Confidence 1 2222212 33356777777777655544
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=41.22 E-value=1.6e+02 Score=24.82 Aligned_cols=75 Identities=12% Similarity=0.101 Sum_probs=47.8
Q ss_pred ccCCceEEEEeeC--CCcEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEE
Q 045370 63 HKSSVTGLLTISG--GTTFFVSSSLDATCKVWDLGSG-------ILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVS 133 (350)
Q Consensus 63 h~~~v~~~~~~~~--~~~~l~s~~~d~~v~vwd~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 133 (350)
....|.++..... ...+++.++..|.++...+..- .....+...+.+-.+........++..+.+|.+..+
T Consensus 97 ~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf 176 (370)
T 3l6v_A 97 SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRF 176 (370)
T ss_dssp TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEE
Confidence 3466766655432 3457899999999998875431 111123334555555555556678888889998888
Q ss_pred eCCc
Q 045370 134 PLKF 137 (350)
Q Consensus 134 d~~~ 137 (350)
+...
T Consensus 177 ~~~~ 180 (370)
T 3l6v_A 177 GEST 180 (370)
T ss_dssp EGGG
T ss_pred Eccc
Confidence 7654
No 373
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=39.41 E-value=1.5e+02 Score=23.78 Aligned_cols=104 Identities=17% Similarity=0.079 Sum_probs=56.8
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEEeCCCCceEEE-EecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCccccccc
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVWDLGSGILIQT-QVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDH 143 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 143 (350)
..|..++.- ..+.++. . ||.|..|-......+-. ......|..++... .+.+..+ ||.|+.|-........
T Consensus 63 ~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg- 134 (282)
T 3qhy_B 63 SGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTT- 134 (282)
T ss_dssp SCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTS-
T ss_pred CCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCC-
Confidence 356666552 2233444 4 89999998664221111 11234566666543 3344444 9999999765422111
Q ss_pred cccccccceeeeccCCceEEEEecCCe-EEEEeCCCcEEEEECCC
Q 045370 144 FIVGEDQHSVLKGHNGSITALAFSASH-LISASEDKTVCLWDVTR 187 (350)
Q Consensus 144 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~s~~~dg~v~iwd~~~ 187 (350)
.-......|..++..... ++. . ||.|+.|-...
T Consensus 135 ---------~~~~~~~~i~~i~~G~~~~~~l-~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 135 ---------VPAEAQSGVTALDGGVYTALAV-K-NGGVIAWGDNY 168 (282)
T ss_dssp ---------CCGGGGSSEEEEEECSSEEEEE-E-TTEEEEEECCT
T ss_pred ---------CCccCCCCeEEEEcccCEEEEE-E-CCEEEEecCCC
Confidence 000122457777776666 443 3 79999997654
No 374
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=39.12 E-value=1.4e+02 Score=23.56 Aligned_cols=142 Identities=13% Similarity=0.012 Sum_probs=74.2
Q ss_pred EEEEEeCCCcEEEEeCCCCce-EEEEecCCceeEEEEcCCCcEEEEEccCCeEEEEeCCcccccccccccccc---ceee
Q 045370 79 FFVSSSLDATCKVWDLGSGIL-IQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSPLKFLLLEDHFIVGEDQ---HSVL 154 (350)
Q Consensus 79 ~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~ 154 (350)
.+++.+.+|.|+--....... ...+...+.+..+........++..+..|.++-+......... ....+ ...+
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r---~~G~~i~~~i~L 80 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSAR---GQGEPLTGKLTL 80 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSS---SCCEEGGGTCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcC---CCCeEeeeeecC
Confidence 455667777776555432111 0113344555555555555566667778887776654321110 01111 1122
Q ss_pred eccCCceEEEEe-cCCe-EEEEeCCCcEEEEECCC-------ceEEEEeccCCCceeEEEEE-ccCCeEEeeecCccccc
Q 045370 155 KGHNGSITALAF-SASH-LISASEDKTVCLWDVTR-------RVSIRRFNHKKGVVTNLVVI-RQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 155 ~~~~~~i~~~~~-~~~~-l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~l~~~-~~~~~l~~~~~~~~~~~ 224 (350)
. ....|.++.. .++. ++..+..|.++...+.. +..+..+.. ...+..+... ..+..++..+..++.++
T Consensus 81 ~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 81 P-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp C-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred C-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 2 2345666644 3444 88889999999887632 334444442 2345555454 23455666777766554
Q ss_pred c
Q 045370 225 K 225 (350)
Q Consensus 225 ~ 225 (350)
.
T Consensus 159 f 159 (256)
T 1zvt_A 159 F 159 (256)
T ss_dssp E
T ss_pred E
Confidence 4
No 375
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=35.75 E-value=1.6e+02 Score=23.22 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=62.0
Q ss_pred CCceEEEEeeCCCcEEEEEeCCCcEEEE---eCCC----CceEE---EEecCCceeEEEEcCCCcEEEEEccCCeEEEEe
Q 045370 65 SSVTGLLTISGGTTFFVSSSLDATCKVW---DLGS----GILIQ---TQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVSP 134 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~d~~v~vw---d~~~----~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 134 (350)
+.+..+...... ..++..+..|.+.-. ++.. |..+. .+.....|.++....++.+++.++..|.++...
T Consensus 33 D~l~~~~~~~t~-~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~ 111 (256)
T 1zvt_A 33 DSFKAAVKGKSN-QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCT 111 (256)
T ss_dssp CCEEEEEEEETT-SCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEE
T ss_pred CEEEEEEEeCCC-CEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeE
Confidence 444444443433 345556667765443 4422 22111 123345566664434566788899999999998
Q ss_pred CCccccccccccccccceeeeccCCceEEEEec--CCe-EEEEeCCCcEEEEECC
Q 045370 135 LKFLLLEDHFIVGEDQHSVLKGHNGSITALAFS--ASH-LISASEDKTVCLWDVT 186 (350)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-l~s~~~dg~v~iwd~~ 186 (350)
+........ .......+... +.+..+... ++. ++..+.+|.+..+...
T Consensus 112 ~~e~~~~~r---~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 112 FNDLVARNR---AGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp GGGGCCCST---TCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred HHHhcccCc---CceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 865432211 11112223222 334333333 333 8888889988888764
No 376
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=34.99 E-value=1.9e+02 Score=26.31 Aligned_cols=60 Identities=23% Similarity=0.276 Sum_probs=38.8
Q ss_pred CCceEEEEeeCCCcEEE-EEeC-----------CCcEEEEeCCCCceEEEEec--CCceeEEEEcCCCcEEEEEc
Q 045370 65 SSVTGLLTISGGTTFFV-SSSL-----------DATCKVWDLGSGILIQTQVY--PQAVTAIAFHPGEQLLFAGS 125 (350)
Q Consensus 65 ~~v~~~~~~~~~~~~l~-s~~~-----------d~~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~ 125 (350)
.....|.|.+ ++.+.+ +=.. ...|..++..++++...+.. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3456677765 455444 3211 12466667777877665542 35789999999999888764
No 377
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=34.23 E-value=1.9e+02 Score=23.55 Aligned_cols=160 Identities=12% Similarity=0.129 Sum_probs=85.1
Q ss_pred ccCCceEEEEee--CCCcEEEEEeCCCcEEEEeCCC-------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEE
Q 045370 63 HKSSVTGLLTIS--GGTTFFVSSSLDATCKVWDLGS-------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVS 133 (350)
Q Consensus 63 h~~~v~~~~~~~--~~~~~l~s~~~d~~v~vwd~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 133 (350)
..+.|.++.... .+..+++..+.+|.++-..+.. |.....+...+.+-.+........++..+.+|.+..+
T Consensus 93 ~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 93 QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRF 172 (307)
T ss_dssp TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEE
Confidence 345566664432 2445788899999999887642 1111113334556555555555677888889998888
Q ss_pred eCCccccccccccccccceeeeccCCceEEEEecCC-e-EEEEeCCCcEEEEECCC---------ceEEEEeccCCCcee
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLKGHNGSITALAFSAS-H-LISASEDKTVCLWDVTR---------RVSIRRFNHKKGVVT 202 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-l~s~~~dg~v~iwd~~~---------~~~~~~~~~~~~~v~ 202 (350)
+...-....... .......+. ....|.++...++ . ++..+..|.++-.++.. |.....+....+.+.
T Consensus 173 ~~~~v~~~gr~a-~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv 250 (307)
T 1zi0_A 173 KESSVRAMGCNT-TGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVV 250 (307)
T ss_dssp EGGGSCBCCTTC-CCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEE
T ss_pred EHHHcCccCCCC-CCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEE
Confidence 776432221110 111111222 2345666654433 3 88888899988887632 122222322234555
Q ss_pred EEEEEccCCeEEeeecCccccc
Q 045370 203 NLVVIRQSSLLSEVSNCQRKLK 224 (350)
Q Consensus 203 ~l~~~~~~~~l~~~~~~~~~~~ 224 (350)
.+....+...++..+..+..++
T Consensus 251 ~~~~v~~~~~l~~~t~~g~~ir 272 (307)
T 1zi0_A 251 GAVQVDDCDQIMMITDAGTLVR 272 (307)
T ss_dssp EEEEECTTCEEEEEESSCCEEE
T ss_pred EEEEeCCCceEEEEcCCCcEEE
Confidence 5444434443444555555443
No 378
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=31.56 E-value=1.8e+02 Score=26.87 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=37.3
Q ss_pred cEEEEEeCCCcEE-EEeCCCCc-------eEEE---EecCCceeEEEEcCCCcEEEEEccCCeEEE
Q 045370 78 TFFVSSSLDATCK-VWDLGSGI-------LIQT---QVYPQAVTAIAFHPGEQLLFAGSIDGRIFV 132 (350)
Q Consensus 78 ~~l~s~~~d~~v~-vwd~~~~~-------~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 132 (350)
..+..|..+|.|. +.-...+. .+.. +....+|..+.++++..+|++++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4577889999874 33322211 1222 235678999999999999999998887665
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=30.84 E-value=1.2e+02 Score=26.78 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=43.1
Q ss_pred CceEEEEeeC-----CCcEEEEEeCCCcEEEEeCC-CCc-------eEEEE---ecCCceeEEEEcCCCcEEEEEccCCe
Q 045370 66 SVTGLLTISG-----GTTFFVSSSLDATCKVWDLG-SGI-------LIQTQ---VYPQAVTAIAFHPGEQLLFAGSIDGR 129 (350)
Q Consensus 66 ~v~~~~~~~~-----~~~~l~s~~~d~~v~vwd~~-~~~-------~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~ 129 (350)
..+.|+...- +-..+..|..+|.|.-.-+. .+. .+..+ ....+|..+.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4566655432 22457789999987544332 221 12222 24578999999999999999998877
Q ss_pred EEE
Q 045370 130 IFV 132 (350)
Q Consensus 130 i~i 132 (350)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 380
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=30.50 E-value=86 Score=23.41 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=26.7
Q ss_pred CCceEEEEecCCe---EEEEeCCCcEEEEECCCceEEE
Q 045370 158 NGSITALAFSASH---LISASEDKTVCLWDVTRRVSIR 192 (350)
Q Consensus 158 ~~~i~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~ 192 (350)
...+.++.|...+ +++.+.++++.+||.+-|+.-.
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v 155 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQS 155 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeec
Confidence 4456667777665 7788889999999999887643
No 381
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=28.40 E-value=1.9e+02 Score=26.83 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=38.0
Q ss_pred cEEEEEeCCCcEEE-EeCCCCceEE-E---EecCCceeEEEEcCCC--cEEEEEccCCeEEE
Q 045370 78 TFFVSSSLDATCKV-WDLGSGILIQ-T---QVYPQAVTAIAFHPGE--QLLFAGSIDGRIFV 132 (350)
Q Consensus 78 ~~l~s~~~d~~v~v-wd~~~~~~~~-~---~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i 132 (350)
..+..|..+|.|.- -....+..+. . +....+|..+.++++. .+|++++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 46778999998743 3443332222 2 2345789999999988 89999998777666
No 382
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=26.78 E-value=2.8e+02 Score=25.20 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=26.9
Q ss_pred EEEEeCCCCceEEEEe--cCCceeEEEEcCCCcEEEEE
Q 045370 89 CKVWDLGSGILIQTQV--YPQAVTAIAFHPGEQLLFAG 124 (350)
Q Consensus 89 v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 124 (350)
+.+.+..++++.+.+. ....++.++|+||++.|++.
T Consensus 511 ~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 511 MLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5556667777666543 45689999999999888775
No 383
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=25.39 E-value=3e+02 Score=23.07 Aligned_cols=118 Identities=9% Similarity=0.023 Sum_probs=62.3
Q ss_pred CceEEEEeeCCCcEEEEEeCCCcEEEEeCCCC-c--------e-EE-EEe--cCCceeEEEEcCCCcEEEEEccCCeEEE
Q 045370 66 SVTGLLTISGGTTFFVSSSLDATCKVWDLGSG-I--------L-IQ-TQV--YPQAVTAIAFHPGEQLLFAGSIDGRIFV 132 (350)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~-~--------~-~~-~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i 132 (350)
.|..++. ...+.+.-..||.|..|-.... + . .. .+. ....|..++......+.++...||.|+.
T Consensus 160 ~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~ 236 (389)
T 3kci_A 160 EVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 236 (389)
T ss_dssp CEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEE
T ss_pred eEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEE
Confidence 5666654 3445566678999999975431 1 1 11 111 1234556655433356666678999999
Q ss_pred EeCCcccccccccccc-ccceeeec-cCCceEEEEecCCeEEEEeCCCcEEEEECC
Q 045370 133 SPLKFLLLEDHFIVGE-DQHSVLKG-HNGSITALAFSASHLISASEDKTVCLWDVT 186 (350)
Q Consensus 133 ~d~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~~~~~~~~~l~s~~~dg~v~iwd~~ 186 (350)
|-.........-.... .....+.. ....|..++......+.-..||.|+.|-..
T Consensus 237 wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 237 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred EeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 9765432211000000 00001111 123477777766664445679999999764
No 384
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.41 E-value=3.2e+02 Score=24.84 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=38.1
Q ss_pred cEEEEEeCCCcEEEEeC-CCC----c-eEEEE---ecCCceeEEEEcCCCcEEEEEccCCeEEEE
Q 045370 78 TFFVSSSLDATCKVWDL-GSG----I-LIQTQ---VYPQAVTAIAFHPGEQLLFAGSIDGRIFVS 133 (350)
Q Consensus 78 ~~l~s~~~d~~v~vwd~-~~~----~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 133 (350)
..+..|..+|.|.-.-. ..+ . .+..+ ....+|..+.++++...|++++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 46778899998854333 222 1 11222 346789999999999999999988776663
No 385
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.32 E-value=2.7e+02 Score=24.93 Aligned_cols=67 Identities=10% Similarity=-0.002 Sum_probs=43.1
Q ss_pred CceEEEEeeCC-CcEEEEEeCCCcEEEEeCCCCc----eEEEEe---cCCcee-EEEEcCCCcEEEEEccCCeEEE
Q 045370 66 SVTGLLTISGG-TTFFVSSSLDATCKVWDLGSGI----LIQTQV---YPQAVT-AIAFHPGEQLLFAGSIDGRIFV 132 (350)
Q Consensus 66 ~v~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~----~~~~~~---~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 132 (350)
..+.|+..... ...+..|..+|.|.-..+..+. ....+. ...+|. .+.+++++.+|++++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45666554422 3567788999988655554321 222222 246785 8999999999999997766555
No 386
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=22.09 E-value=3.3e+02 Score=22.34 Aligned_cols=121 Identities=12% Similarity=0.086 Sum_probs=68.4
Q ss_pred cCCceEEEEeeC--CCcEEEEEeCCCcEEEEeCCC--------CceEEEEecCCceeEEEEcCCCcEEEEEccCCeEEEE
Q 045370 64 KSSVTGLLTISG--GTTFFVSSSLDATCKVWDLGS--------GILIQTQVYPQAVTAIAFHPGEQLLFAGSIDGRIFVS 133 (350)
Q Consensus 64 ~~~v~~~~~~~~--~~~~l~s~~~d~~v~vwd~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 133 (350)
.+.|.++...+. +..+++.++.+|.++...+.. |.....+...+.+-.+........++..+.+|.+..+
T Consensus 91 ~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf 170 (323)
T 1wp5_A 91 DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWF 170 (323)
T ss_dssp TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEE
T ss_pred CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 345666544332 245788899999999887642 1111123344566665555556678888889999888
Q ss_pred eCCccccccccccccccceeeeccCCceEEEEe-cCC--eEEEEeCCCcEEEEECC
Q 045370 134 PLKFLLLEDHFIVGEDQHSVLKGHNGSITALAF-SAS--HLISASEDKTVCLWDVT 186 (350)
Q Consensus 134 d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~--~l~s~~~dg~v~iwd~~ 186 (350)
+...-...... ..+.....+. ....|.++.. .++ .++..+..|..+..++.
T Consensus 171 ~~~ev~~~gR~-a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 171 DESEVSIVGVR-AAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EGGGSCBCCSS-CCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EHHHCcccCCC-CcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 87643222110 1111111222 2344555543 333 37778888887777664
Done!