BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>045375
MALSNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWPVIILGILILVVALAGF
IGGFGASLGSLYFISLPCSFL
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with TRN2 TRN2 TRN2 AT5G46700	protein from Arabidopsis thaliana	1.4e-14
BLAST match view associations BLAST with TET2 TET2 TET2 AT2G19580	protein from Arabidopsis thaliana	2.6e-09
BLAST match view associations BLAST with TET3 TET3 TET3 AT3G45600	protein from Arabidopsis thaliana	8.7e-07
BLAST match view associations BLAST with TET4 TET4 TET4 tetraspanin4	protein from Arabidopsis thaliana	6.7e-06
BLAST match view associations BLAST with TET7 TET7 TET7 AT4G28050	protein from Arabidopsis thaliana	0.00042
BLAST match view associations BLAST with TET9 TET9 TET9 AT4G30430	protein from Arabidopsis thaliana	0.00058
BLAST match view associations BLAST with TET8 TET8 TET8 AT2G23810	protein from Arabidopsis thaliana	0.00058
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045375
        (81 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178570 - symbol:TRN2 "AT5G46700" species:3702...   186  1.4e-14   1
TAIR|locus:2050354 - symbol:TET2 "AT2G19580" species:3702...   140  2.6e-09   1
TAIR|locus:2085692 - symbol:TET3 "AT3G45600" species:3702...   118  8.7e-07   1
TAIR|locus:2144050 - symbol:TET4 "tetraspanin4" species:3...   111  6.7e-06   1
TAIR|locus:2132992 - symbol:TET7 "AT4G28050" species:3702...    93  0.00042   1
TAIR|locus:2118696 - symbol:TET9 "AT4G30430" species:3702...    92  0.00058   1
TAIR|locus:2048982 - symbol:TET8 "AT2G23810" species:3702...    92  0.00058   1


>TAIR|locus:2178570 [details] [associations]
            symbol:TRN2 "AT5G46700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0009933 "meristem structural organization"
            evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
            [GO:0010015 "root morphogenesis" evidence=RCA;IMP] [GO:0010305
            "leaf vascular tissue pattern formation" evidence=IMP] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0007389 "pattern specification process"
            evidence=RCA] [GO:0008361 "regulation of cell size" evidence=RCA]
            [GO:0009855 "determination of bilateral symmetry" evidence=RCA]
            [GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009944
            "polarity specification of adaxial/abaxial axis" evidence=RCA]
            [GO:0010014 "meristem initiation" evidence=RCA] [GO:0010051 "xylem
            and phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
            maintenance" evidence=RCA] [GO:0010075 "regulation of meristem
            growth" evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] [GO:0040007 "growth" evidence=RCA] InterPro:IPR018499
            Pfam:PF00335 PROSITE:PS00421 GO:GO:0016021 GO:GO:0005886
            GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016882
            GO:GO:0009933 GO:GO:0010305 GO:GO:0009934 GO:GO:0009956
            GO:GO:0009554 GO:GO:0010015 HOGENOM:HOG000238911 EMBL:AY070423
            EMBL:BT020321 EMBL:AK226278 IPI:IPI00543149 RefSeq:NP_199482.1
            UniGene:At.29934 UniGene:At.49135 STRING:Q9FIQ5 PRIDE:Q9FIQ5
            EnsemblPlants:AT5G46700.1 GeneID:834713 KEGG:ath:AT5G46700
            TAIR:At5g46700 eggNOG:NOG266680 InParanoid:Q9FIQ5 OMA:EWRRADI
            ProtClustDB:CLSN2686194 Genevestigator:Q9FIQ5 Uniprot:Q9FIQ5
        Length = 269

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 40/64 (62%), Positives = 41/64 (64%)

Query:     1 MALSNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWPXXXXXXXXXXXXXXXF 60
             M LSNNVIG IN + VLLSIPVIGA IWLAI   NSCVKLLQWP               F
Sbjct:     1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query:    61 IGGF 64
             IGGF
Sbjct:    61 IGGF 64


>TAIR|locus:2050354 [details] [associations]
            symbol:TET2 "AT2G19580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000301
            InterPro:IPR018499 Pfam:PF00335 PRINTS:PR00259 PROSITE:PS00421
            GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005917
            HOGENOM:HOG000238911 EMBL:BT011213 EMBL:BT012532 EMBL:AK229021
            IPI:IPI00522677 PIR:E84578 RefSeq:NP_179548.1 UniGene:At.39821
            UniGene:At.67754 PaxDb:Q9ZUN5 PRIDE:Q9ZUN5
            EnsemblPlants:AT2G19580.1 GeneID:816477 KEGG:ath:AT2G19580
            TAIR:At2g19580 eggNOG:NOG246834 InParanoid:Q9ZUN5 OMA:VIACSAF
            PhylomeDB:Q9ZUN5 ProtClustDB:CLSN2683179 Genevestigator:Q9ZUN5
            Uniprot:Q9ZUN5
        Length = 270

 Score = 140 (54.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 27/64 (42%), Positives = 37/64 (57%)

Query:     1 MALSNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWPXXXXXXXXXXXXXXXF 60
             MAL+NN+   +NL+A+L SIP+  + IWLA + DN CV LL+WP               F
Sbjct:     1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query:    61 IGGF 64
             IG +
Sbjct:    61 IGAY 64


>TAIR|locus:2085692 [details] [associations]
            symbol:TET3 "AT3G45600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000301
            InterPro:IPR018499 Pfam:PF00335 PRINTS:PR00259 PROSITE:PS00421
            GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL138657 UniGene:At.22349
            UniGene:At.70243 HOGENOM:HOG000238911 EMBL:AF386960 EMBL:BT006312
            IPI:IPI00530110 PIR:T47500 RefSeq:NP_190146.1 PaxDb:Q9M1E7
            PRIDE:Q9M1E7 EnsemblPlants:AT3G45600.1 GeneID:823702
            KEGG:ath:AT3G45600 TAIR:At3g45600 eggNOG:NOG329121
            InParanoid:Q9M1E7 OMA:MLVPETP PhylomeDB:Q9M1E7
            ProtClustDB:CLSN2684759 Genevestigator:Q9M1E7 Uniprot:Q9M1E7
        Length = 285

 Score = 118 (46.6 bits), Expect = 8.7e-07, P = 8.7e-07
 Identities = 21/45 (46%), Positives = 33/45 (73%)

Query:     1 MALSNNVIGPINLVAVLLSIPVIGARIWLAIEADNS-CVKLLQWP 44
             M  SN++IG +N +  LLSIP++G  IWL+  A+++ C++ LQWP
Sbjct:     1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWP 45


>TAIR|locus:2144050 [details] [associations]
            symbol:TET4 "tetraspanin4" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0007568 "aging" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0009062 "fatty acid catabolic process"
            evidence=RCA] InterPro:IPR000301 InterPro:IPR018499 Pfam:PF00335
            PRINTS:PR00259 PROSITE:PS00421 GO:GO:0016021 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB026632 HOGENOM:HOG000238911
            eggNOG:NOG329121 ProtClustDB:CLSN2684759 IPI:IPI00543023
            RefSeq:NP_200830.1 UniGene:At.55638 PaxDb:Q9LSS4
            EnsemblPlants:AT5G60220.1 GeneID:836144 KEGG:ath:AT5G60220
            TAIR:At5g60220 InParanoid:Q9LSS4 OMA:NETVWIP PhylomeDB:Q9LSS4
            Genevestigator:Q9LSS4 Uniprot:Q9LSS4
        Length = 327

 Score = 111 (44.1 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 21/45 (46%), Positives = 31/45 (68%)

Query:     1 MALSNNVIGPINLVAVLLSIPVIGARIWLAIEADNS-CVKLLQWP 44
             M   +N+IG IN    LLSIP++G  IWL+  A+++ C++ LQWP
Sbjct:     1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWP 45


>TAIR|locus:2132992 [details] [associations]
            symbol:TET7 "AT4G28050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007568 "aging"
            evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007020 "microtubule
            nucleation" evidence=RCA] InterPro:IPR000301 InterPro:IPR018499
            InterPro:IPR018503 Pfam:PF00335 PRINTS:PR00259 PROSITE:PS00421
            GO:GO:0016021 GO:GO:0009506 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161572 EMBL:AL035524 HOGENOM:HOG000238911 EMBL:AY062774
            EMBL:AY081643 EMBL:AY087947 IPI:IPI00520895 PIR:T02906
            RefSeq:NP_194534.1 UniGene:At.48908 UniGene:At.71113 STRING:Q9SUD4
            PaxDb:Q9SUD4 PRIDE:Q9SUD4 EnsemblPlants:AT4G28050.1 GeneID:828920
            KEGG:ath:AT4G28050 TAIR:At4g28050 eggNOG:euNOG01178
            InParanoid:Q9SUD4 OMA:SCLLWLY PhylomeDB:Q9SUD4
            ProtClustDB:CLSN2915900 Genevestigator:Q9SUD4 Uniprot:Q9SUD4
        Length = 263

 Score = 93 (37.8 bits), Expect = 0.00042, P = 0.00042
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query:     4 SNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWP 44
             SNN++G +N    LLSIP++ A IWL   A   C + L  P
Sbjct:     5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKP 45


>TAIR|locus:2118696 [details] [associations]
            symbol:TET9 "AT4G30430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007568 "aging"
            evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR000301
            InterPro:IPR018499 Pfam:PF00335 PRINTS:PR00259 PROSITE:PS00421
            GO:GO:0016021 GO:GO:0005886 EMBL:CP002687 EMBL:AL161577
            HOGENOM:HOG000238911 EMBL:AY084949 IPI:IPI00541610 PIR:H85355
            RefSeq:NP_194772.1 UniGene:At.31835 PRIDE:Q9M0B7
            EnsemblPlants:AT4G30430.1 GeneID:829166 KEGG:ath:AT4G30430
            TAIR:At4g30430 eggNOG:NOG325206 InParanoid:Q9M0B7 OMA:RSCLYES
            PhylomeDB:Q9M0B7 ProtClustDB:CLSN2915944 Genevestigator:Q9M0B7
            Uniprot:Q9M0B7
        Length = 272

 Score = 92 (37.4 bits), Expect = 0.00058, P = 0.00058
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query:     4 SNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWP 44
             SN+++G +N    LLS+P++   IWL+++A   C + L  P
Sbjct:     5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKP 45


>TAIR|locus:2048982 [details] [associations]
            symbol:TET8 "AT2G23810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0007568 "aging"
            evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009612 "response to mechanical stimulus"
            evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA]
            InterPro:IPR000301 InterPro:IPR018499 InterPro:IPR018503
            Pfam:PF00335 PRINTS:PR00259 PROSITE:PS00421 GO:GO:0016021
            GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 EMBL:CP002685
            EMBL:AC004482 EMBL:AC005170 HOGENOM:HOG000238911 EMBL:AK175156
            EMBL:AF325069 EMBL:BT010635 IPI:IPI00523908 PIR:T02338
            RefSeq:NP_850045.2 UniGene:At.20664 STRING:Q8S8Q6 PRIDE:Q8S8Q6
            EnsemblPlants:AT2G23810.1 GeneID:816913 KEGG:ath:AT2G23810
            TAIR:At2g23810 eggNOG:NOG322410 InParanoid:Q8S8Q6 OMA:GCCKPSD
            PhylomeDB:Q8S8Q6 ProtClustDB:CLSN2918919 Genevestigator:Q8S8Q6
            Uniprot:Q8S8Q6
        Length = 273

 Score = 92 (37.4 bits), Expect = 0.00058, P = 0.00058
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query:     4 SNNVIGPINLVAVLLSIPVIGARIWLAIEADNSCVKLLQWP 44
             SNN++G +N +  LLSIP++   IWL+ +    C + L  P
Sbjct:     5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKP 45


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.145   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       81        66   0.00091  102 3  11 22  0.38    28
                                                     29  0.48    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  523 (56 KB)
  Total size of DFA:  92 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.76u 0.16s 5.92t   Elapsed:  00:00:00
  Total cpu time:  5.76u 0.16s 5.92t   Elapsed:  00:00:01
  Start:  Sat May 11 15:12:27 2013   End:  Sat May 11 15:12:28 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
