Query 045375
Match_columns 81
No_of_seqs 102 out of 222
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 22:23:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045375.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045375hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xrda1 f.3.1.1 (A:1-52) Light 15.4 62 0.0046 16.5 2.5 14 45-58 14-27 (52)
2 d1y29a_ g.3.6.2 (A:) Huwentoxi 6.9 7.7 0.00056 17.5 -2.9 8 61-68 19-26 (28)
3 d1q90l_ f.23.24.1 (L:) PetL su 6.1 1.5E+02 0.011 13.2 2.8 18 12-29 6-23 (32)
4 d1rh5b_ f.23.28.1 (B:) Preprot 5.3 2.3E+02 0.017 14.3 3.4 17 45-61 27-43 (56)
5 d2pn2a1 d.227.1.1 (A:1-132) Un 4.2 2.3E+02 0.017 15.2 2.0 13 52-64 45-57 (132)
6 d1ml8a_ d.227.1.2 (A:) Hypothe 4.1 2.4E+02 0.017 15.2 2.0 15 52-66 39-53 (134)
7 d1v54m_ f.23.7.1 (M:) Mitochon 3.6 2.9E+02 0.021 13.1 2.7 17 46-62 15-31 (43)
8 d1ukka_ d.227.1.1 (A:) Hypothe 3.6 2.7E+02 0.02 15.1 2.0 13 52-64 48-60 (141)
9 d1mcti_ g.3.2.1 (I:) Trypsin i 3.4 1.1E+02 0.0081 13.3 -0.0 11 27-37 6-16 (28)
10 d1vlaa_ d.227.1.2 (A:) Hypothe 3.3 3E+02 0.022 14.8 2.0 12 52-63 47-58 (144)
No 1
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=15.38 E-value=62 Score=16.48 Aligned_cols=14 Identities=29% Similarity=0.513 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHH
Q 045375 45 VIILGILILVVALA 58 (81)
Q Consensus 45 li~~G~~i~lvs~l 58 (81)
+++.++++++++++
T Consensus 14 lva~~~fL~~LAl~ 27 (52)
T d1xrda1 14 LVGLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56667777766653
No 2
>d1y29a_ g.3.6.2 (A:) Huwentoxin-X {Spider (Selenocosmia hainana) [TaxId: 209901]}
Probab=6.88 E-value=7.7 Score=17.49 Aligned_cols=8 Identities=13% Similarity=-0.006 Sum_probs=3.2
Q ss_pred HHHHhhhh
Q 045375 61 IGGFGASL 68 (81)
Q Consensus 61 ~GA~~~~~ 68 (81)
||.|..|+
T Consensus 19 cgvcshnk 26 (28)
T d1y29a_ 19 CGVCSHNK 26 (28)
T ss_dssp SSCBSSSC
T ss_pred eeeecccc
Confidence 34444433
No 3
>d1q90l_ f.23.24.1 (L:) PetL subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=6.07 E-value=1.5e+02 Score=13.17 Aligned_cols=18 Identities=28% Similarity=0.444 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhHhhe
Q 045375 12 NLVAVLLSIPVIGARIWL 29 (81)
Q Consensus 12 N~l~~l~gi~ilg~Giwl 29 (81)
+-.=+++|...+-.|+|+
T Consensus 6 syvglligal~~tlgiyl 23 (32)
T d1q90l_ 6 SYVGLLIGALVFTLGIYL 23 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556777777777775
No 4
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=5.29 E-value=2.3e+02 Score=14.26 Aligned_cols=17 Identities=18% Similarity=0.440 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045375 45 VIILGILILVVALAGFI 61 (81)
Q Consensus 45 li~~G~~i~lvs~lG~~ 61 (81)
..+.|+=++++++.|+.
T Consensus 27 a~v~~iG~~i~G~IGf~ 43 (56)
T d1rh5b_ 27 AKVTALGISLLGIIGYI 43 (56)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445556777777764
No 5
>d2pn2a1 d.227.1.1 (A:1-132) Uncharacterized protein Psyc0566 {Psychrobacter arcticus 273-4 [TaxId: 259536]}
Probab=4.21 E-value=2.3e+02 Score=15.20 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHH
Q 045375 52 ILVVALAGFIGGF 64 (81)
Q Consensus 52 i~lvs~lG~~GA~ 64 (81)
+++.|+.||.+.-
T Consensus 45 Lllaala~C~~~~ 57 (132)
T d2pn2a1 45 LLATSLASCMLTI 57 (132)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4456777777643
No 6
>d1ml8a_ d.227.1.2 (A:) Hypothetical protein in CRP region {Escherichia coli [TaxId: 562]}
Probab=4.11 E-value=2.4e+02 Score=15.24 Aligned_cols=15 Identities=13% Similarity=0.040 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHhh
Q 045375 52 ILVVALAGFIGGFGA 66 (81)
Q Consensus 52 i~lvs~lG~~GA~~~ 66 (81)
+++.|+.||.+.--+
T Consensus 39 lllaal~~C~~~~~~ 53 (134)
T d1ml8a_ 39 MVLMAAGGCSAIDVV 53 (134)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445677777775433
No 7
>d1v54m_ f.23.7.1 (M:) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.61 E-value=2.9e+02 Score=13.14 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045375 46 IILGILILVVALAGFIG 62 (81)
Q Consensus 46 i~~G~~i~lvs~lG~~G 62 (81)
.++|.-++.+++++=.|
T Consensus 15 ~aigLt~~f~~~L~PaG 31 (43)
T d1v54m_ 15 QAIGLSVTFLSFLLPAG 31 (43)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHH
Confidence 45677788888887665
No 8
>d1ukka_ d.227.1.1 (A:) Hypothetical protein MPN625 {Thermus thermophilus [TaxId: 274]}
Probab=3.60 E-value=2.7e+02 Score=15.10 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHH
Q 045375 52 ILVVALAGFIGGF 64 (81)
Q Consensus 52 i~lvs~lG~~GA~ 64 (81)
+++.|+.||.+.-
T Consensus 48 lllaala~C~~~~ 60 (141)
T d1ukka_ 48 LIAAAHAGCFSMA 60 (141)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4456777776653
No 9
>d1mcti_ g.3.2.1 (I:) Trypsin inhibitor {Bitter gourd (Momordica charantia), linn. Cucurbitaceae, seed [TaxId: 3673]}
Probab=3.37 E-value=1.1e+02 Score=13.31 Aligned_cols=11 Identities=36% Similarity=1.114 Sum_probs=6.7
Q ss_pred hheeeeccchh
Q 045375 27 IWLAIEADNSC 37 (81)
Q Consensus 27 iwl~~~~~~~c 37 (81)
||+.-+.+++|
T Consensus 6 iwmec~rdsdc 16 (28)
T d1mcti_ 6 IWMECTRDSDC 16 (28)
T ss_dssp CCCBCSSGGGS
T ss_pred hhhhhccchhh
Confidence 57766555555
No 10
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=3.32 E-value=3e+02 Score=14.83 Aligned_cols=12 Identities=25% Similarity=0.515 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHH
Q 045375 52 ILVVALAGFIGG 63 (81)
Q Consensus 52 i~lvs~lG~~GA 63 (81)
+++.|+.||.+.
T Consensus 47 lllaala~C~~~ 58 (144)
T d1vlaa_ 47 LVLTGLMGCTGM 58 (144)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344566777664
Done!