Query 045378
Match_columns 99
No_of_seqs 119 out of 468
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 22:27:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3w3e_A Cotyledoneous yieldin-l 100.0 2.5E-46 8.5E-51 288.0 9.9 98 1-99 6-103 (242)
2 3cql_A Endochitinase; glycosyl 100.0 6.6E-43 2.2E-47 268.7 9.8 96 1-97 5-100 (243)
3 2z37_A Chitinase; family 19, c 100.0 1.9E-42 6.5E-47 266.1 9.6 96 1-97 5-100 (244)
4 1dxj_A Class II chitinase; hyd 100.0 3.7E-42 1.3E-46 264.3 9.8 96 1-97 5-100 (242)
5 2dkv_A Chitinase; whole struct 100.0 1.6E-39 5.3E-44 256.9 9.7 96 1-97 61-156 (309)
6 3hbe_X Class IV chitinase CHIA 100.0 7.8E-36 2.7E-40 224.8 6.4 82 1-97 5-86 (204)
7 2cjl_A Chitinase G, secreted c 99.9 1.8E-26 6.3E-31 172.3 5.5 77 1-97 2-79 (204)
8 1wvv_A Chitinase C; family 19 99.9 1.9E-25 6.6E-30 172.5 5.4 77 1-97 63-140 (265)
9 3dmi_A Cytochrome C6; electron 44.9 38 0.0013 19.4 4.2 35 26-61 45-83 (88)
10 1f1c_A Cytochrome C549; dimeri 44.5 22 0.00074 22.2 3.2 23 46-68 106-128 (129)
11 3o0r_C Nitric oxide reductase 40.9 39 0.0013 21.7 4.2 32 37-71 112-143 (146)
12 3dr0_A Cytochrome C6; photosyn 34.6 65 0.0022 18.3 4.6 38 24-62 47-89 (93)
13 4fpp_A Phosphotransferase; fou 32.3 13 0.00045 26.2 0.8 17 48-64 40-57 (247)
14 1h8b_A ACT-EF34, alpha-actinin 31.6 38 0.0013 20.4 2.7 34 2-35 35-70 (75)
15 4i16_A Caspase recruitment dom 26.0 27 0.00094 22.7 1.4 38 1-38 34-83 (93)
16 1mz4_A Cytochrome C550; PSII a 24.9 62 0.0021 20.5 3.0 32 37-70 101-132 (137)
17 1wve_C 4-cresol dehydrogenase 24.3 43 0.0015 19.4 2.0 37 25-61 34-74 (80)
18 2kyc_A Parvalbumin-3, parvalbu 24.2 50 0.0017 19.4 2.3 54 2-60 6-70 (108)
19 1gdv_A Cytochrome C6; RED ALGA 23.3 1.1E+02 0.0036 17.1 4.6 36 25-61 42-81 (85)
20 3ph2_B Cytochrome C6; photosyn 22.4 1.1E+02 0.0038 17.1 4.3 37 25-62 43-83 (86)
21 2zon_G Cytochrome C551; nitrit 22.2 1.1E+02 0.0038 17.4 3.6 26 36-61 61-86 (87)
22 3cu4_A Cytochrome C family pro 21.5 1.2E+02 0.0042 17.1 4.2 35 26-60 45-83 (85)
23 2bcx_B Ryanodine receptor 1; E 21.1 62 0.0021 17.1 2.0 15 47-61 13-27 (30)
24 1ls9_A Cytochrome C6; omega lo 20.8 1.3E+02 0.0045 17.2 4.8 36 27-63 49-88 (91)
25 1rwy_A Parvalbumin alpha; EF-h 20.6 38 0.0013 19.9 1.2 29 2-35 6-34 (109)
26 1w5c_T Cytochrome C-550; photo 20.3 41 0.0014 22.3 1.4 25 46-70 134-158 (163)
No 1
>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A
Probab=100.00 E-value=2.5e-46 Score=288.04 Aligned_cols=98 Identities=49% Similarity=1.010 Sum_probs=94.3
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||||++.||+|+||||++||+|+++||+|+++|+++++|||||||||||+|||+|||+++|+|||+|||
T Consensus 6 ivt~~~f~~~~~~rn~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlA~~~hET~gg~~~a~~g~~~wg~ 85 (242)
T 3w3e_A 6 VIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDGPYAWGY 85 (242)
T ss_dssp TSCHHHHHHHTTTTTSTTSSCTTCSCHHHHHHHHHTSTTTTCSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGGGCTT
T ss_pred hCCHHHHHHHhhccCCCCCCCCCcccHHHHHHHHHhhhhhcCCCCchhhHHHHHHHHhhcccccCCCcccCCCCccceEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPYCP 99 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s~~ 99 (99)
||+||+++. ++||+...|
T Consensus 86 ~~~~E~~~~-~~YC~~~~P 103 (242)
T 3w3e_A 86 CFVTERDKS-NRYCDGSGP 103 (242)
T ss_dssp CCSBCSCCS-CCCCCSSSC
T ss_pred EEeecccCc-ccccccCCC
Confidence 999999986 899985444
No 2
>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A
Probab=100.00 E-value=6.6e-43 Score=268.69 Aligned_cols=96 Identities=61% Similarity=1.254 Sum_probs=93.4
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus 5 iit~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~a~~g~~~wg~ 84 (243)
T 3cql_A 5 IISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSHETTGGWPSAPDGPYAWGY 84 (243)
T ss_dssp TSCHHHHHHHTTTTTCTTSTTTTTSCHHHHHHHHHTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred hcCHHHHHHHHhcccccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s 97 (99)
||+||+++. ++||+.+
T Consensus 85 ~~~~E~~~~-~~Yc~~~ 100 (243)
T 3cql_A 85 CFLKERNPS-SNYCAPS 100 (243)
T ss_dssp CCSBCSSCS-SCCCCCC
T ss_pred eEEeeecCC-CCccCCC
Confidence 999999987 7999864
No 3
>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A
Probab=100.00 E-value=1.9e-42 Score=266.13 Aligned_cols=96 Identities=55% Similarity=1.046 Sum_probs=93.3
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus 5 iit~~~f~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~HET~gg~~~a~~g~~~wg~ 84 (244)
T 2z37_A 5 IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDGANTWGY 84 (244)
T ss_dssp TSCHHHHHHHTTTTTSTTSSSTTTSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGGGCTT
T ss_pred hCCHHHHHHHHhccCccCCcccCcCcHHHHHHHHHHhhhhccCCCccccHHHHHHHHhhheeecCCccccCCCCcccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s 97 (99)
||++|+++. +.||+.+
T Consensus 85 ~~~~E~~~~-~~Yc~~~ 100 (244)
T 2z37_A 85 CYKEEIDKS-DPHCDSN 100 (244)
T ss_dssp CCSBCSCCC-CCCCCTT
T ss_pred eEeeeecCC-cCCcCcC
Confidence 999999987 7899864
No 4
>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1
Probab=100.00 E-value=3.7e-42 Score=264.27 Aligned_cols=96 Identities=50% Similarity=1.052 Sum_probs=93.3
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||||++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus 5 ~it~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~~~~~~y~wG~ 84 (242)
T 1dxj_A 5 VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPYAWGY 84 (242)
T ss_dssp TSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred hcCHHHHHHHHhccCccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s 97 (99)
||++|+++. .+||+.+
T Consensus 85 ~~~~E~~~~-~~Yc~~~ 100 (242)
T 1dxj_A 85 CFVTERDKS-NKYCDPG 100 (242)
T ss_dssp CCSBCSCCC-CCCCCTT
T ss_pred eeeeccCCC-cccCcCC
Confidence 999999987 7999864
No 5
>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*
Probab=100.00 E-value=1.6e-39 Score=256.94 Aligned_cols=96 Identities=60% Similarity=1.221 Sum_probs=93.3
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+++|+|||
T Consensus 61 iit~~~f~~~~~~rn~~~c~~~~fyty~~fi~Aa~~fp~F~~tG~~~~~krelAaFLAq~~HETggg~~~~~~~~y~wG~ 140 (309)
T 2dkv_A 61 IVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGY 140 (309)
T ss_dssp TSCHHHHHHHTTTTTCTTCTTTTCSCHHHHHHHHHTCTTTTCSSSHHHHHHHHHHHHHHHHHHHCCCCTTCTTCGGGCTT
T ss_pred hccHHHHHHHhhcccccCCCcCCcccHHHHHHHHHhhhhhcccCCccccHHHHHHHHhhcchhcCCCcccCCCccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s 97 (99)
||++|+++. ++||+.+
T Consensus 141 ~~~~E~~~~-~~Yc~~~ 156 (309)
T 2dkv_A 141 CFKQEQNPP-SDYCQPS 156 (309)
T ss_dssp CCSBCSSCS-CCCCCCC
T ss_pred eeeeeecCC-CCCcCCC
Confidence 999999987 7999864
No 6
>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A
Probab=100.00 E-value=7.8e-36 Score=224.80 Aligned_cols=82 Identities=48% Similarity=0.925 Sum_probs=77.9
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++||+||||| ++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+ ||
T Consensus 5 ivt~~~f~~~~~~~-~~~c~~~~fYty~~fi~Aa~~fp~F~~~g~~~~~kreiAaFlAq~~hETg-------------g~ 70 (204)
T 3hbe_X 5 IISQSFFNGLAGGA-ASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANVMHETG-------------GL 70 (204)
T ss_dssp HSCHHHHHHHHHTS-CTTCTTTTTSCHHHHHHHHHTSTTTTTSSSHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred hCCHHHHHHHHcCC-CCCCCCCCcccHHHHHHHHHhcchhcCCCCccccHHHHHHHHhhccccCC-------------Cc
Confidence 69999999999999 56899999999999999999999999999999999999999999999998 79
Q ss_pred eEEeecCCCCCCCCCCC
Q 045378 81 CYIRQVSPASSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~~~~YC~~s 97 (99)
||+||+++. ++|||.+
T Consensus 71 ~~~~E~~~~-~~Ycd~~ 86 (204)
T 3hbe_X 71 CYINEKNPP-INYCQSS 86 (204)
T ss_dssp TCSBCSSCS-SCCCCCC
T ss_pred EEEEeccCC-CCccCCC
Confidence 999999977 6999864
No 7
>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}
Probab=99.93 E-value=1.8e-26 Score=172.27 Aligned_cols=77 Identities=42% Similarity=0.836 Sum_probs=71.6
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++|++|||+|+. ||||++|++|+++||+|+++|++.++||||||||||++|||+ ||
T Consensus 2 ~it~~~f~~i~~~~~~-------fyt~~~~~~A~~~y~~f~~~g~~~~~~~e~AaFlAq~~hETg-------------g~ 61 (204)
T 2cjl_A 2 VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETG-------------GL 61 (204)
T ss_dssp CSCHHHHHHHCTTCCT-------TSCHHHHHHHGGGCTTTTCSSCHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred cCCHHHHHHHhccCCc-------cccHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHhHHHHHcC-------------CC
Confidence 7999999999999985 999999999999999999999999999999999999999997 79
Q ss_pred eEEeecCCC-CCCCCCCC
Q 045378 81 CYIRQVSPA-SSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~-~~~YC~~s 97 (99)
||++|+++. +.+||+.+
T Consensus 62 ~~~~E~~~~~y~~~c~~~ 79 (204)
T 2cjl_A 62 VYVVEQNTANYPHYCDAS 79 (204)
T ss_dssp TCSBCSCGGGGGGGCCTT
T ss_pred cceeecCCCcCccccCCC
Confidence 999999865 35899864
No 8
>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A
Probab=99.91 E-value=1.9e-25 Score=172.48 Aligned_cols=77 Identities=39% Similarity=0.805 Sum_probs=71.5
Q ss_pred CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378 1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY 80 (99)
Q Consensus 1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl 80 (99)
|||+++|++|||+|+. ||||++|++|+++||+|+++|++.++||||||||||++|||+ ||
T Consensus 63 ~it~~~f~~i~~~~~~-------fyty~~~~~A~~~f~~f~~~g~~~~~~~e~AaFlAq~~hETg-------------g~ 122 (265)
T 1wvv_A 63 VVSEAQFNQMFPNRNA-------FYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTG-------------GL 122 (265)
T ss_dssp SSCHHHHHHHCTTCCT-------TCCHHHHHHHGGGSTTTTCSSSHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred eecHHHHHHHhccccc-------cccHHHHHHHHHhcccccccCCcccCHHHHHHHHhHHhHhhc-------------cc
Confidence 7999999999999985 999999999999999999999999999999999999999997 79
Q ss_pred eEEeecCCC-CCCCCCCC
Q 045378 81 CYIRQVSPA-SSDYCYPY 97 (99)
Q Consensus 81 c~~~E~~~~-~~~YC~~s 97 (99)
||++|+++. +..||+.+
T Consensus 123 ~~~~E~~~~~y~~~c~~~ 140 (265)
T 1wvv_A 123 FYIKEVNEANYPHYCDTT 140 (265)
T ss_dssp TCSBCSCGGGGGGGCCTT
T ss_pred eeeEecCCCCCccccccC
Confidence 999999865 34799864
No 9
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=44.91 E-value=38 Score=19.38 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=23.9
Q ss_pred CHHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhh
Q 045378 26 TYDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTG 61 (99)
Q Consensus 26 TY~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~s 61 (99)
+-+.++..+. .+|.|... =++...+.|++|+...+
T Consensus 45 ~~~~l~~~i~~g~~~Mp~~~~~-ls~~ei~~l~~yl~~~~ 83 (88)
T 3dmi_A 45 TEKSIISQVTGGKNAMPAFGGR-LSDEEIANVAAYVLASA 83 (88)
T ss_dssp SHHHHHHHHHHCBTTBCCCTTT-SCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcCCCCCcCCC-CCHHHHHHHHHHHHHHh
Confidence 4566666655 47888642 24557788999998876
No 10
>1f1c_A Cytochrome C549; dimeric cytochrome, electron transport; HET: HEM; 2.30A {Arthrospira maxima} SCOP: a.3.1.1
Probab=44.46 E-value=22 Score=22.20 Aligned_cols=23 Identities=9% Similarity=0.166 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHhhhcccCCCc
Q 045378 46 ETMRKREIAAFFAQTGHETTGGW 68 (99)
Q Consensus 46 ~~~~krElAAFfAh~shET~gg~ 68 (99)
++...+.|++|+........++|
T Consensus 106 s~~ei~~l~~Yl~~l~~~~~~~w 128 (129)
T 1f1c_A 106 SEDDLYNVAGYILLQPKVRGEQW 128 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCccccccC
Confidence 45678899999999988777776
No 11
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=40.89 E-value=39 Score=21.67 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=24.1
Q ss_pred CCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCC
Q 045378 37 FPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDA 71 (99)
Q Consensus 37 fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a 71 (99)
+|.|. =++...+.|++||..++.-...+|+..
T Consensus 112 Mp~~~---Ls~~ei~~l~ayl~~l~~~~~~~wP~~ 143 (146)
T 3o0r_C 112 MPQFH---LSEGQVDDLAEFLKWSSKIDTNQWPPN 143 (146)
T ss_dssp CCCCC---CCHHHHHHHHHHHHHHTTSCCSSCSSS
T ss_pred CCCCC---cCHHHHHHHHHHHHHhccCccCCCCCC
Confidence 56664 246789999999999988777678654
No 12
>3dr0_A Cytochrome C6; photosynthesis, cyanobacteria, electron transfer electron transport, heme, iron, metal-binding, thylakoid; HET: HEM; 1.23A {Synechococcus SP}
Probab=34.62 E-value=65 Score=18.31 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=25.2
Q ss_pred cCCH-HHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhhc
Q 045378 24 FYTY-DAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTGH 62 (99)
Q Consensus 24 fYTY-~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~sh 62 (99)
+.+. +.+...+. .+|+|+.. =++...+.|++|+...+.
T Consensus 47 ~~~~~~~~~~~i~~g~~~Mp~~~~~-ls~~ei~~l~~yl~~l~~ 89 (93)
T 3dr0_A 47 SKSLEEAVAYQVTNGQGAMPAFGGR-LSDADIANVAAYIADQAE 89 (93)
T ss_dssp SSCHHHHHHHHHHHCBTTBCCCBTT-BCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHHHHHHHHHHh
Confidence 3455 66666654 37888632 245577899999998874
No 13
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=32.28 E-value=13 Score=26.20 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=11.4
Q ss_pred HHHHHHHHHHH-hhhccc
Q 045378 48 MRKREIAAFFA-QTGHET 64 (99)
Q Consensus 48 ~~krElAAFfA-h~shET 64 (99)
.++.||||++| .+|||=
T Consensus 40 ~~~~~laallas~IaHEL 57 (247)
T 4fpp_A 40 VQGPDFAAMLAARLCHDF 57 (247)
T ss_dssp ---CHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhccCHHH
Confidence 47778999875 699983
No 14
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=31.63 E-value=38 Score=20.42 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=23.5
Q ss_pred CCHHHHhhhcCCCCCCCC--CCCCcCCHHHHHHHHh
Q 045378 2 ISREMFEDLLPYRNDARC--PARGFYTYDAFIEAAQ 35 (99)
Q Consensus 2 vt~~~F~~lfp~rn~~~c--~~~gfYTY~~fi~Aa~ 35 (99)
+|+++.+.|+.......- .+.|-+.|+.|++.+.
T Consensus 35 lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 35 LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 578888888865431111 2567999999998754
No 15
>4i16_A Caspase recruitment domain-containing protein 11; CBM complex, helix bundle, scaffold protein, BCL10 and MALT1 phosphorylation, signaling protein; 1.75A {Mus musculus}
Probab=25.97 E-value=27 Score=22.73 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=26.4
Q ss_pred CCCHHHHhhhcCCC---CCC--------CCCCCCcCCHHHHHHHHh-cCC
Q 045378 1 IISREMFEDLLPYR---NDA--------RCPARGFYTYDAFIEAAQ-AFP 38 (99)
Q Consensus 1 ivt~~~F~~lfp~r---n~~--------~c~~~gfYTY~~fi~Aa~-~fp 38 (99)
|||+++-|.+.... +.. --+.+|.-.|.+|++|+. .||
T Consensus 34 VLt~~deEeI~~~~~~~t~~~ra~~LLDiL~~rG~~a~~aFlesL~~~yp 83 (93)
T 4i16_A 34 VIDEQDEDEVLNAPMLPSKINRAGRLLDILHTKGQRGYVVFLESLEFYYP 83 (93)
T ss_dssp SSCHHHHHHHHSSCCCSCCTTTTHHHHHHHTTSHHHHHHHHHHHHHHHCH
T ss_pred CCCHHHHHHHhcCccccCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHCH
Confidence 67778888877432 111 135678999999999986 566
No 16
>1mz4_A Cytochrome C550; PSII associated cytochrome, electron transport; HET: HEM; 1.80A {Thermosynechococcus elongatus} SCOP: a.3.1.1 PDB: 1izl_V* 1s5l_V* 2axt_V* 3a0b_V* 3a0h_V* 3arc_V* 3bz1_V* 3bz2_V* 3kzi_V* 3prq_V* 3prr_V*
Probab=24.93 E-value=62 Score=20.54 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=21.3
Q ss_pred CCCCCCCCChHHHHHHHHHHHHhhhcccCCCccC
Q 045378 37 FPGFGNSGNETMRKREIAAFFAQTGHETTGGWTD 70 (99)
Q Consensus 37 fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~ 70 (99)
+|.|. .=.+...+.|++|+.+....-.++|..
T Consensus 101 MP~~~--~Lsd~ei~alaaYl~~~~~~~~~~w~~ 132 (137)
T 1mz4_A 101 FPKMR--NLTEKDLVAIAGHILVEPKILGDKWGG 132 (137)
T ss_dssp SGGGT--TCCHHHHHHHHHHHHHHHHHHGGGCC-
T ss_pred CCCCC--CCCHHHHHHHHHHHHHccccCCccccc
Confidence 56662 234567889999999987765555643
No 17
>1wve_C 4-cresol dehydrogenase [hydroxylating] cytochrome C subunit; flavocytochrome, electron-transfer, FAD, heme, oxidoreductase; HET: FAD HEM; 1.85A {Pseudomonas putida} SCOP: a.3.1.1 PDB: 1diq_C* 1dii_C*
Probab=24.26 E-value=43 Score=19.39 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=25.0
Q ss_pred CCHHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhh
Q 045378 25 YTYDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTG 61 (99)
Q Consensus 25 YTY~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~s 61 (99)
++-+.++..++ .+|.|....=++...+.|++|+....
T Consensus 34 ~~~~~l~~~i~~g~~~Mp~~~~~~ls~~ei~~l~~yl~~~~ 74 (80)
T 1wve_C 34 LPEAYIKDIVRNGFRAMPAFPASYVDDESLTQVAEYLSSLP 74 (80)
T ss_dssp CCHHHHHHHHHHCBTTBCCCCTTTSCHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHhCcCCCCCCcccCCCHHHHHHHHHHHHHCc
Confidence 36666666654 48888533335567889999998764
No 18
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=24.25 E-value=50 Score=19.39 Aligned_cols=54 Identities=15% Similarity=0.192 Sum_probs=36.1
Q ss_pred CCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHh-----------cCCCCCCCCChHHHHHHHHHHHHhh
Q 045378 2 ISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQ-----------AFPGFGNSGNETMRKREIAAFFAQT 60 (99)
Q Consensus 2 vt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~-----------~fp~F~~tG~~~~~krElAAFfAh~ 60 (99)
+|++..++|+..-+ +.|.-+|+.|+.+.. .|-.|-..|+-.+.+.|+...+..+
T Consensus 6 ~~~~e~~~l~~~~d-----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2kyc_A 6 LSPSDIAAALRDCQ-----APDSFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRF 70 (108)
T ss_dssp SCHHHHHHHHTTSC-----STTTCCHHHHHHHHTCTTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHH
T ss_pred CCHHHHHHHHHHcC-----CCCcCCHHHHHHHHhhCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 67888888885432 556889999998874 2444544555556666766666655
No 19
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=23.27 E-value=1.1e+02 Score=17.11 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=24.5
Q ss_pred CCHHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhh
Q 045378 25 YTYDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTG 61 (99)
Q Consensus 25 YTY~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~s 61 (99)
.+-+.+++.+. .+|.|... -++...+.|++|+....
T Consensus 42 ~~~~~l~~~i~~g~~~Mp~~~~~-ls~~ei~~l~~yl~~~~ 81 (85)
T 1gdv_A 42 NTIDAITYQVQNGKNAMPAFGGR-LVDEDIEDAANYVLSQS 81 (85)
T ss_dssp CSHHHHHHHHHHCBTTBCCCTTT-SCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcCCCCCCCCC-CCHHHHHHHHHHHHHHh
Confidence 45666766664 47888652 34556788999998765
No 20
>3ph2_B Cytochrome C6; photosynthesis, cytochrome F, photosys thylakoid; HET: HEM; 1.40A {Phormidium laminosum} SCOP: a.3.1.1 PDB: 2v08_A* 1c6s_A*
Probab=22.39 E-value=1.1e+02 Score=17.05 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=25.3
Q ss_pred CCHHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhhc
Q 045378 25 YTYDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTGH 62 (99)
Q Consensus 25 YTY~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~sh 62 (99)
.+.+.++..+. .+|.|+.. =++...+.|++|+...+.
T Consensus 43 ~~~~~~~~~i~~g~~~Mp~~~~~-ls~~ei~~l~~yl~~~~~ 83 (86)
T 3ph2_B 43 NSIVAITTVVTNGKAGMPAFKGR-LTDDQIAAVAAYVLDQAE 83 (86)
T ss_dssp CSHHHHHHHHHHCBTTBCCCTTT-SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCCCCcccC-CCHHHHHHHHHHHHHhhh
Confidence 46667777665 47888632 245577899999988764
No 21
>2zon_G Cytochrome C551; nitrite, electron transfer, denitrification, oxidoreductase/electron transport complex; HET: HEM; 1.70A {Achromobacter xylosoxidans}
Probab=22.22 E-value=1.1e+02 Score=17.44 Aligned_cols=26 Identities=19% Similarity=0.380 Sum_probs=17.5
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHhhh
Q 045378 36 AFPGFGNSGNETMRKREIAAFFAQTG 61 (99)
Q Consensus 36 ~fp~F~~tG~~~~~krElAAFfAh~s 61 (99)
.+|.|....=++...+.|++|+...+
T Consensus 61 ~Mp~~~~~~ls~~ei~~l~~yl~~~~ 86 (87)
T 2zon_G 61 AMPPRGGTAADEATLRAAVAYMMDAA 86 (87)
T ss_dssp TBCGGGGCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 47887642234566789999988754
No 22
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=21.53 E-value=1.2e+02 Score=17.15 Aligned_cols=35 Identities=14% Similarity=0.253 Sum_probs=21.6
Q ss_pred CHHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhh
Q 045378 26 TYDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQT 60 (99)
Q Consensus 26 TY~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~ 60 (99)
+.+.++..+. .+|.|....=++...+.|++|+...
T Consensus 45 ~~~~l~~~i~~g~~~Mp~~~~~~ls~~ei~~l~~yi~~~ 83 (85)
T 3cu4_A 45 TVRDVAAYIRNPGPGMPAFGEAMIPPADALKIGEYVVAS 83 (85)
T ss_dssp SHHHHHHHTTSCCTTSCCCCTTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 4555555543 3788865222455678899998764
No 23
>2bcx_B Ryanodine receptor 1; EF-hand, type-2 turn, calcium binding protein; 2.00A {Gallus gallus}
Probab=21.07 E-value=62 Score=17.06 Aligned_cols=15 Identities=33% Similarity=0.496 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhhh
Q 045378 47 TMRKREIAAFFAQTG 61 (99)
Q Consensus 47 ~~~krElAAFfAh~s 61 (99)
.+|||++-|.|-.++
T Consensus 13 ~qRKRaVvacfrm~p 27 (30)
T 2bcx_B 13 KQRRRAVVACFRMTP 27 (30)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhcc
Confidence 579999999887753
No 24
>1ls9_A Cytochrome C6; omega loop, antiparallel beta-sheet, protoporphyrin IX containing Fe, heme, HAEM, electron transport; HET: HEM; 1.30A {Cladophora glomerata} SCOP: a.3.1.1
Probab=20.80 E-value=1.3e+02 Score=17.20 Aligned_cols=36 Identities=8% Similarity=0.205 Sum_probs=23.8
Q ss_pred HHHHHHHHh----cCCCCCCCCChHHHHHHHHHHHHhhhcc
Q 045378 27 YDAFIEAAQ----AFPGFGNSGNETMRKREIAAFFAQTGHE 63 (99)
Q Consensus 27 Y~~fi~Aa~----~fp~F~~tG~~~~~krElAAFfAh~shE 63 (99)
.+.++..+. .+|.|... =++...+.|++|+.....+
T Consensus 49 ~~~l~~~i~~g~~~Mp~~~~~-ls~~ei~~l~~yl~~~~~~ 88 (91)
T 1ls9_A 49 LEAIKYQVNNGKGAMPAWADR-LDEDDIEAVSNYVYDQAVN 88 (91)
T ss_dssp HHHHHHHHHHCBTTBCCCTTT-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCcCCCcchhhh-CCHHHHHHHHHHHHHhccc
Confidence 444444443 47888632 2455788999999988773
No 25
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=20.55 E-value=38 Score=19.94 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=20.6
Q ss_pred CCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHh
Q 045378 2 ISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQ 35 (99)
Q Consensus 2 vt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~ 35 (99)
+|++..+.|+..-+ +.|.-+|+.|+.+..
T Consensus 6 ~t~~e~~~~~~~~d-----~~g~i~~~eF~~~~~ 34 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT-----AADSFDHKKFFQMVG 34 (109)
T ss_dssp SCHHHHHHHHHTTC-----STTCCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHcC-----CCCcEeHHHHHHHHh
Confidence 57777788874432 456789999998764
No 26
>1w5c_T Cytochrome C-550; photosynthesis, water oxidation, photosystem, membrane protein; HET: CL1 CLA PHO HEM HEC BCR; 3.2A {Thermosynechococcus elongatus} SCOP: i.5.1.1
Probab=20.26 E-value=41 Score=22.30 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHhhhcccCCCccC
Q 045378 46 ETMRKREIAAFFAQTGHETTGGWTD 70 (99)
Q Consensus 46 ~~~~krElAAFfAh~shET~gg~~~ 70 (99)
++...+.|++|+......-.++|..
T Consensus 134 sd~ei~~laaYl~sl~~~~~~~w~~ 158 (163)
T 1w5c_T 134 TEKDLVAIAGHILVEPKILGDKWGG 158 (163)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGGTT
T ss_pred CHHHHHHHHHHHHHcccccCCCCCC
Confidence 4567889999999887765555753
Done!